Lcy12g001820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g001820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pectin lyase-like superfamily protein
Location	Chr12: 4378069 .. 4379792 (+)
RNA-Seq Expression	Lcy12g001820
Synteny	Lcy12g001820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATGAAGTTGAACTTGATGGGTCTATCCTTTTTATTATTATTTGTATCGATTGGTAAAGCTCAATCTACCGATGGCGTTTTTGATGTGACAAAGTATGGTGCTAAGCCTGATGCTGATATATCTCAGGTGAATGCAAAATGTTGTGTGTTATATATATTAATGTCTTAGAGGGAAAACATCAAACATGATAAATCATTTTTAATGATGTATACAATTTTAAATAGGCCTTGACAAATGCTTGGAAGGAGGCATGTGCATCAACAATTCAAAGTAAAATAGTCATTCCAAAAGCGACATACAAGTTAGGTACAGTCGAGATGGTAGGTCCATGCAAAAGTCCTATCGAAATTCAACTTCAAGGAACATTGCAGGCCCCAATAGATCTAACTGGAGAAGGTTGGGTTAGTTTCAAATATATCGACTACTTTACATTAACAGGTGGTGGAGTTTTAGATGGACAAGGAAAAGTAGCTTGGGAAAAAAATGATTGTGACAAAAATCCAAAATGCGACAGAATTCCCATGGTAAAGCACACTTCAATCATCGAATTAGTGTTCTTAGTACCTTTCTTTCTTTTCTAGTTTCTATATTGATTAAACTATATAATCCATATGGTTAGATTTTTAATAAAGGCCAAACCAACAACTCACAATTTCTCTGAATAAATATATATGTATGATCTTTTTTTCTTTTTATCAAAAATCTGCAGACTTTGAAGCTCAGCTTTATCACAAATTCAATAGTGAGTGACATAACCTCTAAAGATAGCAAGAATTTTCATGTTAATGTTTTGGGTTGTAAAAACCTTACCTTCCAACATGTGAACATAAATGCACCCGGAGATAGTATCAATAGTGATGGAATTCACATTGGTCGTTCTCTTGGAATTAATGTCATCAATACAAACATTGGCACTGGAGATGATTGTATCTCACTTGGAGATGGAAGCAAGCAAGTAACAATTACTAATGTGACATGTGGTCCGGGACATGGTATTAGTGTAGGAAGTTTAGGAAAGTACAATGCTGAAGAACCAGTTGAGGGAATCATAGTTAAGAATTGTACATTGATGAATACATCAAATGGCGTAAGAATCAAATCATGGCCTGCTTCTCCTGTTGCTGGAACAGCTTCTGATATGCACTATGAAGATATAATTATGGTTAATGTCAGTAATCCCATTCTCATAGATCAAGAATATTGTCCATACAACCAATGTAATAAAAAGGTACTAAACTCATGGATTTTTTATTTTTTATTTTTTTATTGCATTTATAAATGTTTCAATTAAACTGAAGAAGCCTTGTTCTGTCTCTTTCTTTCCAGAGTCCATCCAAAGTCAAGATTAGTAAGGTTACTTTCAAGAATATCAGAGGTACTTCGGGTAATGCACTTGCCGTCAAACTTGTTTGTAGTTCTCAGGTTCCATGTGAAGGTGTAGAGCTAGCTGACATTGACCTCACTTACAATGGAAGTGAAGGCCCTATTACATCTCAATGTTTAAATGTGAAGCCTACTATTTCTGGAAAGCAAAACCCTCCTGCATGTTCTTCTCCTGCTGCTACTATCCTAGCTTAAACTAATTTTGTAGAGTTGACTATTTGATGGAGAAATCTTTTTACTTTTTTTATTTATTATCATATACTAAAGCTTTAGTCTAGTTGATACAATTTCTTTTTTTTTTTTTTTTTTGTAACTTCATAATTCTTTAACACCCA

mRNA sequence

ATGGGTATGAAGTTGAACTTGATGGGTCTATCCTTTTTATTATTATTTGTATCGATTGGTAAAGCTCAATCTACCGATGGCGTTTTTGATGTGACAAAGTATGGTGCTAAGCCTGATGCTGATATATCTCAGGCCTTGACAAATGCTTGGAAGGAGGCATGTGCATCAACAATTCAAAGTAAAATAGTCATTCCAAAAGCGACATACAAGTTAGGTACAGTCGAGATGGTAGGTCCATGCAAAAGTCCTATCGAAATTCAACTTCAAGGAACATTGCAGGCCCCAATAGATCTAACTGGAGAAGGTTGGGTTAGTTTCAAATATATCGACTACTTTACATTAACAGGTGGTGGAGTTTTAGATGGACAAGGAAAAGTAGCTTGGGAAAAAAATGATTGTGACAAAAATCCAAAATGCGACAGAATTCCCATGACTTTGAAGCTCAGCTTTATCACAAATTCAATAGTGAGTGACATAACCTCTAAAGATAGCAAGAATTTTCATGTTAATGTTTTGGGTTGTAAAAACCTTACCTTCCAACATGTGAACATAAATGCACCCGGAGATAGTATCAATAGTGATGGAATTCACATTGGTCGTTCTCTTGGAATTAATGTCATCAATACAAACATTGGCACTGGAGATGATTGTATCTCACTTGGAGATGGAAGCAAGCAAGTAACAATTACTAATGTGACATGTGGTCCGGGACATGGTATTAGTGTAGGAAGTTTAGGAAAGTACAATGCTGAAGAACCAGTTGAGGGAATCATAGTTAAGAATTGTACATTGATGAATACATCAAATGGCGTAAGAATCAAATCATGGCCTGCTTCTCCTGTTGCTGGAACAGCTTCTGATATGCACTATGAAGATATAATTATGGTTAATGTCAGTAATCCCATTCTCATAGATCAAGAATATTGTCCATACAACCAATGTAATAAAAAGAGTCCATCCAAAGTCAAGATTAGTAAGGTTACTTTCAAGAATATCAGAGGTACTTCGGGTAATGCACTTGCCGTCAAACTTGTTTGTAGTTCTCAGGTTCCATGTGAAGGTGTAGAGCTAGCTGACATTGACCTCACTTACAATGGAAGTGAAGGCCCTATTACATCTCAATGTTTAAATGTGAAGCCTACTATTTCTGGAAAGCAAAACCCTCCTGCATGTTCTTCTCCTGCTGCTACTATCCTAGCTTAAACTAATTTTGTAGAGTTGACTATTTGATGGAGAAATCTTTTTACTTTTTTTATTTATTATCATATACTAAAGCTTTAGTCTAGTTGATACAATTTCTTTTTTTTTTTTTTTTTTGTAACTTCATAATTCTTTAACACCCA

Coding sequence (CDS)

ATGGGTATGAAGTTGAACTTGATGGGTCTATCCTTTTTATTATTATTTGTATCGATTGGTAAAGCTCAATCTACCGATGGCGTTTTTGATGTGACAAAGTATGGTGCTAAGCCTGATGCTGATATATCTCAGGCCTTGACAAATGCTTGGAAGGAGGCATGTGCATCAACAATTCAAAGTAAAATAGTCATTCCAAAAGCGACATACAAGTTAGGTACAGTCGAGATGGTAGGTCCATGCAAAAGTCCTATCGAAATTCAACTTCAAGGAACATTGCAGGCCCCAATAGATCTAACTGGAGAAGGTTGGGTTAGTTTCAAATATATCGACTACTTTACATTAACAGGTGGTGGAGTTTTAGATGGACAAGGAAAAGTAGCTTGGGAAAAAAATGATTGTGACAAAAATCCAAAATGCGACAGAATTCCCATGACTTTGAAGCTCAGCTTTATCACAAATTCAATAGTGAGTGACATAACCTCTAAAGATAGCAAGAATTTTCATGTTAATGTTTTGGGTTGTAAAAACCTTACCTTCCAACATGTGAACATAAATGCACCCGGAGATAGTATCAATAGTGATGGAATTCACATTGGTCGTTCTCTTGGAATTAATGTCATCAATACAAACATTGGCACTGGAGATGATTGTATCTCACTTGGAGATGGAAGCAAGCAAGTAACAATTACTAATGTGACATGTGGTCCGGGACATGGTATTAGTGTAGGAAGTTTAGGAAAGTACAATGCTGAAGAACCAGTTGAGGGAATCATAGTTAAGAATTGTACATTGATGAATACATCAAATGGCGTAAGAATCAAATCATGGCCTGCTTCTCCTGTTGCTGGAACAGCTTCTGATATGCACTATGAAGATATAATTATGGTTAATGTCAGTAATCCCATTCTCATAGATCAAGAATATTGTCCATACAACCAATGTAATAAAAAGAGTCCATCCAAAGTCAAGATTAGTAAGGTTACTTTCAAGAATATCAGAGGTACTTCGGGTAATGCACTTGCCGTCAAACTTGTTTGTAGTTCTCAGGTTCCATGTGAAGGTGTAGAGCTAGCTGACATTGACCTCACTTACAATGGAAGTGAAGGCCCTATTACATCTCAATGTTTAAATGTGAAGCCTACTATTTCTGGAAAGCAAAACCCTCCTGCATGTTCTTCTCCTGCTGCTACTATCCTAGCTTAA

Protein sequence

MGMKLNLMGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVLDGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPAATILA

Homology

[Close]

BLAST of Lcy12g001820 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 1.3e-128
Identity = 225/360 (62.50%), Postives = 268/360 (74.44%), Query Frame = 0


Query: 41  DISQALTNAWKEACASTIQSKIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPID--- 100
           D +QALT AWKEACAS   S I++PK  + +G + + GPCKS I +QLQGTL+AP D   
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 101 LTGEGWVSFKYIDYFTLTGGGVLDGQGKVAWEKNDCDKN-PKCDRIPMTLKLSFITNSIV 160
           + G GW++   ID  T+ GGGV DGQGK AW +NDC KN P C  + M L+L  +TNSI+
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 161 SDITSKDSKNFHVNVLGCKNLTFQHVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDD 220
            D+T+ DSKNFHVNV+GCKNLTF+   I+A   SIN+DGIHIGRS G+N+INT I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 221 CISLGDGSKQVTITNVTCGPGHGISVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSW 280
           CISLGDGSK + ITN+TCGPGHGISVGSLG+Y  EE V GI VKNCT+  + NGVRIK+W
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

Query: 281 PASPVAGTASDMHYEDIIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTS 340
           P S   G AS+MH++DI M +V  PILIDQ YCPYNQC  + PS VK+SK++FKNI+GTS
Sbjct: 241 PKSE-PGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 300

Query: 341 GNALAVKLVCSSQVPCEGVELADIDLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPAA 397
               AVKLVCS   PC GVELADIDLTY+G  GP TS C N+KPTI GKQ P  CS  AA
Sbjct: 301 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICSGSAA 359

[Close]

BLAST of Lcy12g001820 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 2.7e-126
Identity = 222/403 (55.09%), Postives = 288/403 (71.46%), Query Frame = 0


Query: 3   MKLNLMGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQSKI 62
           MK +   +   L       AQS  GV D++K+G KP++DI QALT+AW EACAST  +KI
Sbjct: 1   MKFSTAIIVSFLFIADFCAAQS--GVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKI 60

Query: 63  VIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLT----GEGWVSFKYIDYFTLTGGG 122
           VIP  TY+L  +E+ GPCK+PIE+Q+ GT+QAP D +     E W  F Y+D+ TL+G G
Sbjct: 61  VIPAGTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKG 120

Query: 123 VLDGQGKVAWEKND-----CDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLG 182
           V DGQG   ++K         KN    ++ M    +F+ NSIV  +TSKDSKNFHV V G
Sbjct: 121 VFDGQGATVYKKAAPASAWSGKNSN-SKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFG 180

Query: 183 CKNLTFQHVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVT 242
           CKN+TF    I APGDS N+DGIH+G+S  + ++NTNIGTGDDC+S+GDGSKQ+T+  V 
Sbjct: 181 CKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVN 240

Query: 243 CGPGHGISVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDI 302
           CGPGHG+SVGSLGK+  EE VEGI VKNCTL  T NGVRIK+WP +P   T SD+H+EDI
Sbjct: 241 CGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDI 300

Query: 303 IMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCE 362
            M NV NP++IDQEY P+NQC+KK+PSK+K+SK++FKN++GTSG A  V L+CSS VPC+
Sbjct: 301 TMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCD 360

Query: 363 GVELADIDLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPAA 397
           GVEL ++DL +NG+  P T++C NVKP ++G    P C +P A
Sbjct: 361 GVELNNVDLKFNGA--PTTAKCTNVKPLVTG--TAPVCQAPGA 396

[Close]

BLAST of Lcy12g001820 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.6e-126
Identity = 220/400 (55.00%), Postives = 293/400 (73.25%), Query Frame = 0


Query: 1   MGMKLNLMGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQS 60
           M +K  +     LL     G++Q+  GVFD+TKYGA  +ADIS+AL NA+KEAC ST  S
Sbjct: 1   MDLKFKVHFALVLLFLAHFGESQT--GVFDITKYGANSNADISEALLNAFKEACQSTSPS 60

Query: 61  KIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPID---LTGEGWVSFKYIDYFTLTGG 120
            IVIPK T+ +  V++ GPCKSP+E+Q+Q TL+AP D   L    W++   +D FT++GG
Sbjct: 61  TIVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGG 120

Query: 121 GVLDGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNL 180
           G+LDGQ   AWE   C ++ KC+++P  L  + +TNS + DIT+ DSK+FHVNV  CKNL
Sbjct: 121 GILDGQAAAAWE---CKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNL 180

Query: 181 TFQHVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPG 240
           TF   N++AP +S N+DGIH+ RS  +N+ ++N  TGDDCIS+GD ++Q+ IT VTCGPG
Sbjct: 181 TFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPG 240

Query: 241 HGISVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVN 300
           HGISVGSLG    E+PV G+ V+NCT  NT NGVRIK+WPAS   G  +D+H+EDII+ N
Sbjct: 241 HGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASH-PGVVNDVHFEDIIVQN 300

Query: 301 VSNPILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVEL 360
           VSNP++IDQ YCP+N+CNK  PS+VKISKV+F+NI+GTS    AV L+ S  VPCEG+E+
Sbjct: 301 VSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEV 360

Query: 361 ADIDLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPAAT 398
            DID+TY+G EGP  S C N+KP++ GKQNPP C++ AA+
Sbjct: 361 GDIDITYSGKEGPAKSSCENIKPSLKGKQNPPVCTASAAS 394

[Close]

BLAST of Lcy12g001820 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 3.9e-125
Identity = 219/401 (54.61%), Postives = 284/401 (70.82%), Query Frame = 0


Query: 1   MGMKLNLMGLSF--LLLFVSIGKAQSTDGVFDVTKYGAKPD--ADISQALTNAWKEACAS 60
           M   LN++   F  LLLF+S  K QS D    V K+GAK D   D+S+   +AWKEACAS
Sbjct: 1   MAPHLNIVPSMFVLLLLFISASKVQS-DAFDVVAKFGAKADGKTDLSKPFLDAWKEACAS 60

Query: 61  TIQSKIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPID---LTGEGWVSFKYIDYFT 120
              S +VIPK TY L  V + GPCK+PIEI +QGT+QAP D        WV F  ++ F 
Sbjct: 61  VTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFK 120

Query: 121 LTGGGVLDGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLG 180
           + GGG+ DGQG +A+EKN C+      ++P+ ++  F+TN+++ DITSKDSK FH+NV  
Sbjct: 121 MFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFA 180

Query: 181 CKNLTFQHVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVT 240
           CKN+T + + I AP +S N+DGIH+G+S G+N+I ++I TGDDCIS+GDG+K + I  +T
Sbjct: 181 CKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEIT 240

Query: 241 CGPGHGISVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDI 300
           CGPGHGIS+GSLGK+  EEPVEGI + NCT+ NTSNG RIK+WP     G  S++H+EDI
Sbjct: 241 CGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEH-GGAVSEIHFEDI 300

Query: 301 IMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCE 360
            M NVS+PILIDQ+YCP+N+C K   SKVK+S ++FKNIRGTS    A+K +CS   PC+
Sbjct: 301 TMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQ 360

Query: 361 GVELADIDLTYNGSEGPITSQCLNVKPTISGKQNPPACSSP 395
            VELADID+ +NG+E P TSQCLNVKP  SGK NP  CS P
Sbjct: 361 NVELADIDIKHNGAE-PATSQCLNVKPITSGKLNPIPCSGP 398

[Close]

BLAST of Lcy12g001820 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 4.3e-124
Identity = 214/400 (53.50%), Postives = 282/400 (70.50%), Query Frame = 0


Query: 1   MGMKLNLMGLSFLLLFVSIGKAQSTDGVFD-VTKYGAKPD--ADISQALTNAWKEACAST 60
           M   LN++   F+LL + I  ++     FD V K+GAK D   D+S+   +AWKEACAS 
Sbjct: 1   MAPHLNIVPSMFVLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASV 60

Query: 61  IQSKIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPID---LTGEGWVSFKYIDYFTL 120
             S +VIPK TY L  V + GPCK+PIEI +QGT+QAP D        WV F  ++ F +
Sbjct: 61  TPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKM 120

Query: 121 TGGGVLDGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGC 180
            GGG+ DGQG +A+EKN C+      ++P+ ++  F+TN+++ DITSKDSK FH+NV  C
Sbjct: 121 FGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFAC 180

Query: 181 KNLTFQHVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTC 240
           KN+T + + I AP +S N+DGIH+G+S G+N+I ++I TGDDCIS+GDG+K + I  +TC
Sbjct: 181 KNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITC 240

Query: 241 GPGHGISVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDII 300
           GPGHGIS+GSLGK+  EEPVEGI + NCT+ NTSNG RIK+WP     G  S++H+EDI 
Sbjct: 241 GPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEH-GGAVSEIHFEDIT 300

Query: 301 MVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEG 360
           M NVS+PILIDQ+YCP+N+C K   SKVK+S ++FKNIRGTS    A+K +CS   PC+ 
Sbjct: 301 MNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQN 360

Query: 361 VELADIDLTYNGSEGPITSQCLNVKPTISGKQNPPACSSP 395
           VELADID+ +NG+E P TSQCLNVKP   GK NP  CS P
Sbjct: 361 VELADIDIQHNGAE-PATSQCLNVKPITIGKLNPIPCSGP 398

[Close]

BLAST of Lcy12g001820 vs. ExPASy TrEMBL
Match: A0A6J1DUC6 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111024096 PE=3 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 8.9e-197
Identity = 327/395 (82.78%), Postives = 367/395 (92.91%), Query Frame = 0


Query: 1   MGMKLNLMGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQS 60
           MGM+LNL+ LS +LLFVS  KAQS+DG+FDVTK+GA P+ADIS+AL +AWKEACAS IQS
Sbjct: 1   MGMELNLLILSVVLLFVSTTKAQSSDGIFDVTKFGAMPNADISKALMSAWKEACASPIQS 60

Query: 61  KIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVL 120
           K++IPK  YKLGT+++ GPCKSPIE+QLQGT+QAPIDLTGEGWV FKYID+FTL+GGG  
Sbjct: 61  KVIIPKVAYKLGTIDLTGPCKSPIEVQLQGTIQAPIDLTGEGWVQFKYIDHFTLSGGGTF 120

Query: 121 DGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQ 180
           DGQGK AWEKNDCDKNPKCDR+PM+L+ SFITNSIVSDITSKDSKNFHV +LGC NLTFQ
Sbjct: 121 DGQGKAAWEKNDCDKNPKCDRLPMSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQ 180

Query: 181 HVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGI 240
           HVN+NAPGDSIN+DGIHIGRS GIN+++TNIGTGDDCISLGDGSKQVTITNVTCGPGHGI
Sbjct: 181 HVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNVTCGPGHGI 240

Query: 241 SVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSN 300
           SVGSLG+Y AEEPVEGI   NCT+MNTSNGVRIK+WPASP AGTASDMH+ED+IMVNVSN
Sbjct: 241 SVGSLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTAGTASDMHFEDMIMVNVSN 300

Query: 301 PILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADI 360
           PILIDQEYCPYNQCNKKSPSKVKISKV+FKN+RG+S NALAVKLVCS++VPCE VE+ADI
Sbjct: 301 PILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAVKLVCSAEVPCEDVEVADI 360

Query: 361 DLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPA 396
           DLTYNG+EGPI+SQC NVKP ISGKQNP ACSSPA
Sbjct: 361 DLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPA 395

[Close]

BLAST of Lcy12g001820 vs. ExPASy TrEMBL
Match: A0A6J1DBN7 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111019009 PE=3 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.7e-187
Identity = 319/395 (80.76%), Postives = 353/395 (89.37%), Query Frame = 0


Query: 1   MGMKLNLMGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQS 60
           M ++LNL+ LSF+LLFVS GKAQSTDGVFDVTKYGAKP  DISQAL  AWKEACAST QS
Sbjct: 5   MSIELNLVALSFVLLFVSRGKAQSTDGVFDVTKYGAKPGTDISQALLKAWKEACASTTQS 64

Query: 61  KIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVL 120
           K++IPKA+Y+L  V++VGPCKSPI I+ QGTLQAPID TGEGWV+FKYID+F+LTGGGV 
Sbjct: 65  KVIIPKASYQLTGVDLVGPCKSPIGIEFQGTLQAPIDPTGEGWVNFKYIDHFSLTGGGVF 124

Query: 121 DGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQ 180
           DGQGK+AWEKNDC +NP C + PM+LK SFITNSIVS+ITSKDSKNFHV VLGC NLTF+
Sbjct: 125 DGQGKLAWEKNDCGQNPNCAQFPMSLKFSFITNSIVSEITSKDSKNFHVFVLGCNNLTFE 184

Query: 181 HVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGI 240
           HV I+APG SIN+DGIHIGRS  +NV++T IGTGDDCISLGDGSK VTI NVTCGPGHGI
Sbjct: 185 HVTIDAPGHSINTDGIHIGRSNEVNVLSTRIGTGDDCISLGDGSKHVTINNVTCGPGHGI 244

Query: 241 SVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSN 300
           SVGSLG+Y  EEPVEGIIVKNCT  NT NGVRIK+WPASP  GTA++MHYEDIIMVNVSN
Sbjct: 245 SVGSLGRYTVEEPVEGIIVKNCTFTNTDNGVRIKTWPASPTPGTATNMHYEDIIMVNVSN 304

Query: 301 PILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADI 360
           PILIDQEYCPYNQCNKK PSKVKISKV+FKNIRG+S NALAVK++CSS  PCEGVE+ADI
Sbjct: 305 PILIDQEYCPYNQCNKKIPSKVKISKVSFKNIRGSSANALAVKIICSSDFPCEGVEIADI 364

Query: 361 DLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPA 396
           DLTYNGSEGPITSQC NVKP ISGKQNPPACSS A
Sbjct: 365 DLTYNGSEGPITSQCSNVKPIISGKQNPPACSSVA 399

[Close]

BLAST of Lcy12g001820 vs. ExPASy TrEMBL
Match: A0A1S3CC08 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103498752 PE=3 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 4.4e-180
Identity = 307/390 (78.72%), Postives = 340/390 (87.18%), Query Frame = 0


Query: 8   MGLSFLLLFVSIGKAQSTDG--VFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIP 67
           M +   L+ +S   A +T G  +FDVTKYGAKP+ADI+QAL +AWKEACAST   KIVIP
Sbjct: 1   MTVPIFLVVLSSAAAGATPGGAIFDVTKYGAKPNADITQALADAWKEACASTSPCKIVIP 60

Query: 68  KATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVLDGQGK 127
             TYKLGT+E+ G CKSPIEIQ+QGTLQAP DLTGE WV FKYIDY ++T GGV DGQGK
Sbjct: 61  TGTYKLGTIELKGECKSPIEIQVQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGK 120

Query: 128 VAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNIN 187
            AWE NDCDKNPKC RIPM LK SFI N+IVSDITSKDSKNFH+ VLGC NLTFQHVN+N
Sbjct: 121 QAWESNDCDKNPKCARIPMNLKFSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVN 180

Query: 188 APGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 247
           AP  SIN+DGIHIGRSLGIN++NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL
Sbjct: 181 APETSINTDGIHIGRSLGINILNTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 240

Query: 248 GKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILID 307
           G+YN EEPVEG+ VKNCTL  T+NG+RIK+WPASP AG ASDMHYED++M NV NPILID
Sbjct: 241 GRYNLEEPVEGLQVKNCTLTGTTNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILID 300

Query: 308 QEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYN 367
           QEYCPYNQCNK+ PSKVKISKV+FKNIRGTSGNA AV LVCSS  PC+GVELADIDLTY+
Sbjct: 301 QEYCPYNQCNKQVPSKVKISKVSFKNIRGTSGNAAAVTLVCSSSNPCDGVELADIDLTYS 360

Query: 368 GSEGPITSQCLNVKPTISGKQNPPACSSPA 396
           GSEGPITS+C NVKPT+SGKQNPPAC+SPA
Sbjct: 361 GSEGPITSRCANVKPTVSGKQNPPACTSPA 390

[Close]

BLAST of Lcy12g001820 vs. ExPASy TrEMBL
Match: A0A5A7T7B3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001590 PE=3 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 2.2e-179
Identity = 301/368 (81.79%), Postives = 330/368 (89.67%), Query Frame = 0


Query: 28  VFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIPKATYKLGTVEMVGPCKSPIEIQ 87
           +FDVTKYGAKP+ADI+QAL +AWKEACAST   KIVIP  TYKLGT+E+ G CKSPIEIQ
Sbjct: 75  IFDVTKYGAKPNADITQALADAWKEACASTSPCKIVIPTGTYKLGTIELKGECKSPIEIQ 134

Query: 88  LQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVLDGQGKVAWEKNDCDKNPKCDRIPMTLK 147
           +QGTLQAP DLTGE WV FKYIDY ++T GGV DGQGK AWE NDCDKNPKC RIPM LK
Sbjct: 135 VQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGKQAWESNDCDKNPKCARIPMNLK 194

Query: 148 LSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNINAPGDSINSDGIHIGRSLGINVI 207
            SFI N+IVSDITSKDSKNFH+ VLGC NLTFQHVN+NAP  SIN+DGIHIGRSLGIN++
Sbjct: 195 FSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGINIL 254

Query: 208 NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGKYNAEEPVEGIIVKNCTLMNT 267
           NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLG+YN EEPVEG+ VKNCTL  T
Sbjct: 255 NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNLEEPVEGLQVKNCTLTGT 314

Query: 268 SNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKV 327
           +NG+RIK+WPASP AG ASDMHYED++M NV NPILIDQEYCPYNQCNK+ PSKVKISKV
Sbjct: 315 TNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILIDQEYCPYNQCNKQVPSKVKISKV 374

Query: 328 TFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYNGSEGPITSQCLNVKPTISGKQN 387
           +FKNIRGTSGNA AV LVCSS  PC+GVELADIDLTY+GSEGPITS+C NVKPT+SGKQN
Sbjct: 375 SFKNIRGTSGNAAAVTLVCSSSNPCDGVELADIDLTYSGSEGPITSRCANVKPTVSGKQN 434

Query: 388 PPACSSPA 396
           PPAC+SPA
Sbjct: 435 PPACTSPA 442

[Close]

BLAST of Lcy12g001820 vs. ExPASy TrEMBL
Match: A0A6J1HJP4 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111465122 PE=3 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 2.5e-167
Identity = 274/394 (69.54%), Postives = 336/394 (85.28%), Query Frame = 0


Query: 1   MGMKLNLMGLSF-LLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQ 60
           MGM +  + LSF LLL+VSI  AQS+DGVFDVT YGAKP+ADI+Q L  AWK+ACAS IQ
Sbjct: 1   MGMNMRSITLSFVLLLYVSIRTAQSSDGVFDVTTYGAKPNADITQILDKAWKDACASPIQ 60

Query: 61  SKIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGV 120
           SK++IPK TY LG + ++GPCKSPI+I +QGT+ AP+D+TG+GW+ F+Y+D  +LTGGGV
Sbjct: 61  SKLIIPKETYMLGVITLLGPCKSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGV 120

Query: 121 LDGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTF 180
            DGQG+ AWE+NDC KNPKC RIPM+LK SF+ +SIV DITSKDSKNFHVN+LGCKNLTF
Sbjct: 121 FDGQGQKAWERNDCHKNPKCARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTF 180

Query: 181 QHVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHG 240
            HV INAPG SINSDGIH+GR  G+N+IN+ IGTGDDCISLGDGS++VTITNVTCGPGHG
Sbjct: 181 DHVTINAPGTSINSDGIHMGRCDGVNIINSVIGTGDDCISLGDGSREVTITNVTCGPGHG 240

Query: 241 ISVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVS 300
           ISVGSLG+Y  EEPV G+ VKNCTL+ T+NG+RIK+WPASP  G+ +DMHYEDI++V+V 
Sbjct: 241 ISVGSLGQYLVEEPVAGLYVKNCTLIGTTNGLRIKTWPASPATGSVTDMHYEDIVLVDVQ 300

Query: 301 NPILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELAD 360
           NPI++DQEYCPYN+CN+K PSK+KISKV+FKNIRG++GNA+AVKL+CS+  PCE V L+D
Sbjct: 301 NPIILDQEYCPYNKCNRKIPSKIKISKVSFKNIRGSAGNAVAVKLLCSADYPCEDVTLSD 360

Query: 361 IDLTYNGSEGPITSQCLNVKPTISGKQNPPACSS 394
           ID+TY G EGP+ S+C NVKP ++G Q P  C S
Sbjct: 361 IDITYTGREGPVVSECSNVKPVVTGIQKPIICPS 394

[Close]

BLAST of Lcy12g001820 vs. NCBI nr
Match: XP_022157387.1 (exopolygalacturonase-like [Momordica charantia] >XP_022159278.1 exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 696.0 bits (1795), Expect = 1.8e-196
Identity = 327/395 (82.78%), Postives = 367/395 (92.91%), Query Frame = 0


Query: 1   MGMKLNLMGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQS 60
           MGM+LNL+ LS +LLFVS  KAQS+DG+FDVTK+GA P+ADIS+AL +AWKEACAS IQS
Sbjct: 1   MGMELNLLILSVVLLFVSTTKAQSSDGIFDVTKFGAMPNADISKALMSAWKEACASPIQS 60

Query: 61  KIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVL 120
           K++IPK  YKLGT+++ GPCKSPIE+QLQGT+QAPIDLTGEGWV FKYID+FTL+GGG  
Sbjct: 61  KVIIPKVAYKLGTIDLTGPCKSPIEVQLQGTIQAPIDLTGEGWVQFKYIDHFTLSGGGTF 120

Query: 121 DGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQ 180
           DGQGK AWEKNDCDKNPKCDR+PM+L+ SFITNSIVSDITSKDSKNFHV +LGC NLTFQ
Sbjct: 121 DGQGKAAWEKNDCDKNPKCDRLPMSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQ 180

Query: 181 HVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGI 240
           HVN+NAPGDSIN+DGIHIGRS GIN+++TNIGTGDDCISLGDGSKQVTITNVTCGPGHGI
Sbjct: 181 HVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNVTCGPGHGI 240

Query: 241 SVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSN 300
           SVGSLG+Y AEEPVEGI   NCT+MNTSNGVRIK+WPASP AGTASDMH+ED+IMVNVSN
Sbjct: 241 SVGSLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTAGTASDMHFEDMIMVNVSN 300

Query: 301 PILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADI 360
           PILIDQEYCPYNQCNKKSPSKVKISKV+FKN+RG+S NALAVKLVCS++VPCE VE+ADI
Sbjct: 301 PILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAVKLVCSAEVPCEDVEVADI 360

Query: 361 DLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPA 396
           DLTYNG+EGPI+SQC NVKP ISGKQNP ACSSPA
Sbjct: 361 DLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPA 395

[Close]

BLAST of Lcy12g001820 vs. NCBI nr
Match: XP_022150984.1 (exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 664.1 bits (1712), Expect = 7.7e-187
Identity = 319/395 (80.76%), Postives = 353/395 (89.37%), Query Frame = 0


Query: 1   MGMKLNLMGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQS 60
           M ++LNL+ LSF+LLFVS GKAQSTDGVFDVTKYGAKP  DISQAL  AWKEACAST QS
Sbjct: 5   MSIELNLVALSFVLLFVSRGKAQSTDGVFDVTKYGAKPGTDISQALLKAWKEACASTTQS 64

Query: 61  KIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVL 120
           K++IPKA+Y+L  V++VGPCKSPI I+ QGTLQAPID TGEGWV+FKYID+F+LTGGGV 
Sbjct: 65  KVIIPKASYQLTGVDLVGPCKSPIGIEFQGTLQAPIDPTGEGWVNFKYIDHFSLTGGGVF 124

Query: 121 DGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQ 180
           DGQGK+AWEKNDC +NP C + PM+LK SFITNSIVS+ITSKDSKNFHV VLGC NLTF+
Sbjct: 125 DGQGKLAWEKNDCGQNPNCAQFPMSLKFSFITNSIVSEITSKDSKNFHVFVLGCNNLTFE 184

Query: 181 HVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGI 240
           HV I+APG SIN+DGIHIGRS  +NV++T IGTGDDCISLGDGSK VTI NVTCGPGHGI
Sbjct: 185 HVTIDAPGHSINTDGIHIGRSNEVNVLSTRIGTGDDCISLGDGSKHVTINNVTCGPGHGI 244

Query: 241 SVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSN 300
           SVGSLG+Y  EEPVEGIIVKNCT  NT NGVRIK+WPASP  GTA++MHYEDIIMVNVSN
Sbjct: 245 SVGSLGRYTVEEPVEGIIVKNCTFTNTDNGVRIKTWPASPTPGTATNMHYEDIIMVNVSN 304

Query: 301 PILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADI 360
           PILIDQEYCPYNQCNKK PSKVKISKV+FKNIRG+S NALAVK++CSS  PCEGVE+ADI
Sbjct: 305 PILIDQEYCPYNQCNKKIPSKVKISKVSFKNIRGSSANALAVKIICSSDFPCEGVEIADI 364

Query: 361 DLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPA 396
           DLTYNGSEGPITSQC NVKP ISGKQNPPACSS A
Sbjct: 365 DLTYNGSEGPITSQCSNVKPIISGKQNPPACSSVA 399

[Close]

BLAST of Lcy12g001820 vs. NCBI nr
Match: XP_008459709.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 640.6 bits (1651), Expect = 9.2e-180
Identity = 307/390 (78.72%), Postives = 340/390 (87.18%), Query Frame = 0


Query: 8   MGLSFLLLFVSIGKAQSTDG--VFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIP 67
           M +   L+ +S   A +T G  +FDVTKYGAKP+ADI+QAL +AWKEACAST   KIVIP
Sbjct: 1   MTVPIFLVVLSSAAAGATPGGAIFDVTKYGAKPNADITQALADAWKEACASTSPCKIVIP 60

Query: 68  KATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVLDGQGK 127
             TYKLGT+E+ G CKSPIEIQ+QGTLQAP DLTGE WV FKYIDY ++T GGV DGQGK
Sbjct: 61  TGTYKLGTIELKGECKSPIEIQVQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGK 120

Query: 128 VAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNIN 187
            AWE NDCDKNPKC RIPM LK SFI N+IVSDITSKDSKNFH+ VLGC NLTFQHVN+N
Sbjct: 121 QAWESNDCDKNPKCARIPMNLKFSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVN 180

Query: 188 APGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 247
           AP  SIN+DGIHIGRSLGIN++NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL
Sbjct: 181 APETSINTDGIHIGRSLGINILNTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 240

Query: 248 GKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILID 307
           G+YN EEPVEG+ VKNCTL  T+NG+RIK+WPASP AG ASDMHYED++M NV NPILID
Sbjct: 241 GRYNLEEPVEGLQVKNCTLTGTTNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILID 300

Query: 308 QEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYN 367
           QEYCPYNQCNK+ PSKVKISKV+FKNIRGTSGNA AV LVCSS  PC+GVELADIDLTY+
Sbjct: 301 QEYCPYNQCNKQVPSKVKISKVSFKNIRGTSGNAAAVTLVCSSSNPCDGVELADIDLTYS 360

Query: 368 GSEGPITSQCLNVKPTISGKQNPPACSSPA 396
           GSEGPITS+C NVKPT+SGKQNPPAC+SPA
Sbjct: 361 GSEGPITSRCANVKPTVSGKQNPPACTSPA 390

[Close]

BLAST of Lcy12g001820 vs. NCBI nr
Match: KAA0039364.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK00547.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 638.3 bits (1645), Expect = 4.5e-179
Identity = 301/368 (81.79%), Postives = 330/368 (89.67%), Query Frame = 0


Query: 28  VFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIPKATYKLGTVEMVGPCKSPIEIQ 87
           +FDVTKYGAKP+ADI+QAL +AWKEACAST   KIVIP  TYKLGT+E+ G CKSPIEIQ
Sbjct: 75  IFDVTKYGAKPNADITQALADAWKEACASTSPCKIVIPTGTYKLGTIELKGECKSPIEIQ 134

Query: 88  LQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVLDGQGKVAWEKNDCDKNPKCDRIPMTLK 147
           +QGTLQAP DLTGE WV FKYIDY ++T GGV DGQGK AWE NDCDKNPKC RIPM LK
Sbjct: 135 VQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGKQAWESNDCDKNPKCARIPMNLK 194

Query: 148 LSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNINAPGDSINSDGIHIGRSLGINVI 207
            SFI N+IVSDITSKDSKNFH+ VLGC NLTFQHVN+NAP  SIN+DGIHIGRSLGIN++
Sbjct: 195 FSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGINIL 254

Query: 208 NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGKYNAEEPVEGIIVKNCTLMNT 267
           NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLG+YN EEPVEG+ VKNCTL  T
Sbjct: 255 NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNLEEPVEGLQVKNCTLTGT 314

Query: 268 SNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKV 327
           +NG+RIK+WPASP AG ASDMHYED++M NV NPILIDQEYCPYNQCNK+ PSKVKISKV
Sbjct: 315 TNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILIDQEYCPYNQCNKQVPSKVKISKV 374

Query: 328 TFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYNGSEGPITSQCLNVKPTISGKQN 387
           +FKNIRGTSGNA AV LVCSS  PC+GVELADIDLTY+GSEGPITS+C NVKPT+SGKQN
Sbjct: 375 SFKNIRGTSGNAAAVTLVCSSSNPCDGVELADIDLTYSGSEGPITSRCANVKPTVSGKQN 434

Query: 388 PPACSSPA 396
           PPAC+SPA
Sbjct: 435 PPACTSPA 442

[Close]

BLAST of Lcy12g001820 vs. NCBI nr
Match: XP_038889253.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 617.5 bits (1591), Expect = 8.3e-173
Identity = 294/400 (73.50%), Postives = 344/400 (86.00%), Query Frame = 0


Query: 1   MGMKLNLMGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQS 60
           MG+ LNL+ L  + LFVS+GK QS D VFDVTKYGA P+ DISQALTN W  AC ST QS
Sbjct: 1   MGLMLNLVVLFSISLFVSLGKGQSNDSVFDVTKYGAMPNTDISQALTNVWTMACGSTSQS 60

Query: 61  KIVIPKATYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTGEGWVSFKYIDYFTLTGGGVL 120
           K++IP+ TY+L  +++ GPCK+ I+IQL+G L+API+L GE W+SF+YID FTLTG GV 
Sbjct: 61  KVLIPEGTYQLSIIKLTGPCKNHIQIQLEGILEAPINLIGEHWISFQYIDQFTLTGTGVF 120

Query: 121 DGQGKVAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQ 180
           DGQGKVAW KNDC KN KC ++P+ L+ +FITNSIVSDITSKDSK+FHVNVLGCKNLTFQ
Sbjct: 121 DGQGKVAWGKNDCAKNSKCSKLPINLRFNFITNSIVSDITSKDSKSFHVNVLGCKNLTFQ 180

Query: 181 HVNINAPGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGI 240
           HVNINAPG S N+DGIHI RS+GINV NTNI TGDDCISLGDGS+QVTITN+TCGPGHGI
Sbjct: 181 HVNINAPGYSPNTDGIHITRSIGINVTNTNISTGDDCISLGDGSRQVTITNITCGPGHGI 240

Query: 241 SVGSLGKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSN 300
           SVGSLGKY AE PV+G+I KNCTL+NT+NGVRIK+WP+SP  GTASDMH+EDIIMVNVSN
Sbjct: 241 SVGSLGKYVAEAPVQGVIAKNCTLINTTNGVRIKTWPSSPSFGTASDMHFEDIIMVNVSN 300

Query: 301 PILIDQEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADI 360
           PI+IDQ+YCP+NQC+K +PSKVKIS V+FKNIRGT+ NALAV  VCSSQ PCE +E+ADI
Sbjct: 301 PIIIDQKYCPWNQCDKTNPSKVKISDVSFKNIRGTAANALAVNFVCSSQFPCEDIEVADI 360

Query: 361 DLTYNGSEGPITSQCLNVKPTISGKQNPPACSSPAATILA 401
           +LTYNGS GPI+SQC NVKP  SG Q+PPACSSP++T  A
Sbjct: 361 NLTYNGSGGPISSQCKNVKPIFSGIQSPPACSSPSSTAKA 400

[Close]

BLAST of Lcy12g001820 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 436.8 bits (1122), Expect = 1.9e-122
Identity = 210/390 (53.85%), Postives = 281/390 (72.05%), Query Frame = 0


Query: 9   GLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIPKAT 68
           G+S + +   +G + + + VF +   G+   +DI+QAL  A+  AC S+  SK+VIPK  
Sbjct: 6   GVSTIFIICLLGISANAE-VFTI---GSSSGSDITQALLKAFTSACQSSSPSKVVIPKGE 65

Query: 69  YKLGTVEMVGPCKSPIEIQLQGTLQAPIDLT--GEGWVSFKYIDYFTLTGGGVLDGQGKV 128
           +KLG +EM GPCK+PIE+ LQGT++A  +     E WV F  ID F L GGG  DG+G  
Sbjct: 66  FKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNA 125

Query: 129 AWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNINA 188
           AW  N+C K  +C ++P++++  FI NS + DI+S D+KNFH+NVLG KN+T  ++ I A
Sbjct: 126 AWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVA 185

Query: 189 PGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLG 248
           P DS N+DGIH+GRS G+ ++N+ I TGDDCIS+GDG K + +  VTCGPGHGISVGSLG
Sbjct: 186 PEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLG 245

Query: 249 KYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILIDQ 308
           +Y  E+ V GI V NCTL  T NG+RIK+WP++  + TASD+H+EDII+ +VSNPILIDQ
Sbjct: 246 RYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQ 305

Query: 309 EYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYNG 368
           EYCP+NQCNK+  S +K+  ++FKNIRGTSGN  AVKL+CS   PC+ VE+ DID+ YNG
Sbjct: 306 EYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNG 365

Query: 369 SEGPITSQCLNVKPTISGKQNPPACSSPAA 397
           ++GP T  C NV P I G Q+P ACS+PAA
Sbjct: 366 ADGPATFHCSNVSPKILGSQSPKACSAPAA 391

[Close]

BLAST of Lcy12g001820 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 429.9 bits (1104), Expect = 2.3e-120
Identity = 205/388 (52.84%), Postives = 276/388 (71.13%), Query Frame = 0


Query: 8   MGLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIPKA 67
           +G+S +L  +S+    +   VF+V   G  P +DI+QAL  A+  AC +   SK+VI K 
Sbjct: 5   LGISAVLFVISLLGFSANAEVFNV---GGSPGSDITQALLKAFTSACQAPTASKVVITKG 64

Query: 68  TYKLGTVEMVGPCKSPIEIQLQGTLQAPIDLT--GEGWVSFKYIDYFTLTGGGVLDGQGK 127
            +KLG +EM GPCK+P+EI LQGTL+A        E WV F  I+ F L GGG+ DG+G 
Sbjct: 65  EFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKERWVVFLRINGFKLNGGGIFDGEGN 124

Query: 128 VAWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNIN 187
            AW  N+C K  +C ++P++++  F+ N+ + DI+S D+KNFH+NVLG KN+TF +V + 
Sbjct: 125 AAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVI 184

Query: 188 APGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 247
           AP +S N+DGIH+GRS G+ ++N+ I TGDDCIS+GDG K + + NV CGPGHGISVGSL
Sbjct: 185 APAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSL 244

Query: 248 GKYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILID 307
           G+Y  E+ V GI V NCTL  T NG+RIK+WP++  A TAS +H+E+II+ NVSNPILID
Sbjct: 245 GRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILID 304

Query: 308 QEYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYN 367
           QEYCP+NQCNK+ PS +K+  ++FKNIRGTSGN  AVKL+CS   PC  VE+ +I+L Y 
Sbjct: 305 QEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYK 364

Query: 368 GSEGPITSQCLNVKPTISGKQNPPACSS 394
           G++GP T  C NV P + G QNP ACS+
Sbjct: 365 GADGPPTFMCSNVSPKLVGTQNPKACSA 389

[Close]

BLAST of Lcy12g001820 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 427.2 bits (1097), Expect = 1.5e-119
Identity = 199/387 (51.42%), Postives = 279/387 (72.09%), Query Frame = 0


Query: 9   GLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIPKAT 68
           G+S   +F  +G + +   +F++    + P +DI+ AL  A+ EAC    +S ++IPK  
Sbjct: 7   GVSAFFVFCLLGLSANAK-IFNI---NSPPGSDITNALLKAFNEACQFPTKSTVMIPKGE 66

Query: 69  YKLGTVEMVGPCKSPIEIQLQGTLQAPIDLTG-EGWVSFKYIDYFTLTGGGVLDGQGKVA 128
           YKLG + M+GPCK+PI I L GT++A  +  G E WV+F+ I+ F L GGGV DG+G  A
Sbjct: 67  YKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEKWVAFRNINGFKLNGGGVFDGEGNAA 126

Query: 129 WEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNINAP 188
           W  N+C K   C ++P++++  F+T++ +  ITS D+K+FH+NV+G KN+TF+ V I AP
Sbjct: 127 WRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAP 186

Query: 189 GDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGK 248
            +S N+DGIH+GRS GI +IN+ I TGDDC+S+GDG K + +  VTCGPGHGIS+GSLG+
Sbjct: 187 AESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGR 246

Query: 249 YNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILIDQE 308
           Y+ EE V GI + NCTL  T NG+RIK+WP++    TASD+H+E+I++ NVSNPILIDQE
Sbjct: 247 YSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQE 306

Query: 309 YCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYNGS 368
           YCP+NQCNK+ PS +K++ ++FK IRGTSGN  AVKL+CS   PC+ VE+ D+++ Y G+
Sbjct: 307 YCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGA 366

Query: 369 EGPITSQCLNVKPTISGKQNPPACSSP 395
           +GP T QC NV P + G Q P ACSSP
Sbjct: 367 DGPATFQCSNVSPKLVGTQIPKACSSP 389

[Close]

BLAST of Lcy12g001820 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 420.2 bits (1079), Expect = 1.8e-117
Identity = 196/388 (50.52%), Postives = 276/388 (71.13%), Query Frame = 0


Query: 9   GLSFLLLFVSIGKAQSTDGVFDVTKYGAKPDADISQALTNAWKEACASTIQSKIVIPKAT 68
           G+S + +   +G + +   V  +T   + P +DI+QAL  A+  AC S    K+VIPK  
Sbjct: 6   GISTIFVICLLGFSANAHEVLRLT---SSPGSDITQALLRAFTTACQSPTPRKVVIPKGQ 65

Query: 69  YKLGTVEMVGPCKSPIEIQLQGTLQAPIDLT--GEGWVSFKYIDYFTLTGGGVLDGQGKV 128
           +KLG + M GPCKSP+EI L GT+ A  +     E WV F+ +D F L GGG  DG+G  
Sbjct: 66  FKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNA 125

Query: 129 AWEKNDCDKNPKCDRIPMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNINA 188
           AW  N+C K  +C ++P++++  F+TN+ + DI+S D+KNFH+NV+G KN+TF +V I A
Sbjct: 126 AWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMA 185

Query: 189 PGDSINSDGIHIGRSLGINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLG 248
           P +S N+DGIH+GRS+G+++IN+ I TGDDC+S+GDG   + + NV CGPGHGISVGSLG
Sbjct: 186 PAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLG 245

Query: 249 KYNAEEPVEGIIVKNCTLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILIDQ 308
           +Y  E+ V GI V NCTL  T NG+RIK+WP++  + TAS++H+E+II+ NVSNPILIDQ
Sbjct: 246 RYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQ 305

Query: 309 EYCPYNQCNKKSPSKVKISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYNG 368
           EYCP+NQCNK+  S +K++ ++F+ IRGTSGN  AVKL+CS   PCE V++ DI++ Y G
Sbjct: 306 EYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTG 365

Query: 369 SEGPITSQCLNVKPTISGKQNPPACSSP 395
           ++GP T  C NV+P + G Q P AC++P
Sbjct: 366 ADGPATFMCSNVRPKLVGTQFPKACNTP 390

[Close]

BLAST of Lcy12g001820 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 396.4 bits (1017), Expect = 2.8e-110
Identity = 191/373 (51.21%), Postives = 256/373 (68.63%), Query Frame = 0


Query: 30  DVTKYGAKPD--ADISQALTNAWKEACASTIQSKIVIPKATYKLGTVEMVGPCKSPIEIQ 89
           DV   GAK D   D S A   AWKEACA+   S I +PK  Y + ++E  GPCK P+ ++
Sbjct: 72  DVKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKGPVTLE 131

Query: 90  LQGTLQAPIDL----TGEGWVSFKYIDYFTLTGG-GVLDGQGKVAWEKNDCDKNPKCDRI 149
           L G  +AP  +       GW+ F+ +  FTL G   + DGQG +AW+ NDC K  KC+ +
Sbjct: 132 LNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSL 191

Query: 150 PMTLKLSFITNSIVSDITSKDSKNFHVNVLGCKNLTFQHVNINAPGDSINSDGIHIGRSL 209
           P+ ++ + +TNS ++ ITS +SK FH+N+L CKN+T   + I+AP +S+N+DGIHIGRS 
Sbjct: 192 PINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSN 251

Query: 210 GINVINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGKYNAEEPVEGIIVKNC 269
           G+N+I   I TGDDC+S+GDG++ + + NV CGPGHGIS+GSLG+Y  E+PV+G+ V+ C
Sbjct: 252 GVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKC 311

Query: 270 TLMNTSNGVRIKSWPASPVAGTASDMHYEDIIMVNVSNPILIDQEYCPYNQCNKKSPSKV 329
            + NT NGVRIK+WP SP  G AS++ +EDI M NVS P+LIDQEYCPY  C    PSKV
Sbjct: 312 LIKNTDNGVRIKTWPGSP-PGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKV 371

Query: 330 KISKVTFKNIRGTSGNALAVKLVCSSQVPCEGVELADIDLTYNGSEGPITSQCLNVKPTI 389
           K+S VT KNI+GTS   +AVKL+CS  VPC  + L+DI+L +NG EGP  S C N+KP +
Sbjct: 372 KLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPIL 431

Query: 390 SGKQNPPACSSPA 396
           SGK  P AC+  A
Sbjct: 432 SGKLVPAACTEVA 441

The following BLAST results are available for this feature:

BLAST of Lcy12g001820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	1.3e-128	62.50	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q40312	2.7e-126	55.09	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q05967	3.6e-126	55.00	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
Q39786	3.9e-125	54.61	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	4.3e-124	53.50	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]

BLAST of Lcy12g001820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUC6	8.9e-197	82.78	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111024096 PE=3 SV...	[more]
A0A6J1DBN7	3.7e-187	80.76	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111019009 PE=3 SV...	[more]
A0A1S3CC08	4.4e-180	78.72	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103498752 PE=3 SV=1	[more]
A0A5A7T7B3	2.2e-179	81.79	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1HJP4	2.5e-167	69.54	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111465122 PE=3 SV=1	[more]

BLAST of Lcy12g001820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157387.1	1.8e-196	82.78	exopolygalacturonase-like [Momordica charantia] >XP_022159278.1 exopolygalacturo...	[more]
XP_022150984.1	7.7e-187	80.76	exopolygalacturonase-like [Momordica charantia]	[more]
XP_008459709.2	9.2e-180	78.72	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
KAA0039364.1	4.5e-179	81.79	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK00547.1 exopolygalactur...	[more]
XP_038889253.1	8.3e-173	73.50	exopolygalacturonase-like [Benincasa hispida]	[more]

BLAST of Lcy12g001820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	1.9e-122	53.85	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	2.3e-120	52.84	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	1.5e-119	51.42	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	1.8e-117	50.52	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	2.8e-110	51.21	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 224..244 e-value: 2000.0 score: 5.0 coord: 254..275 e-value: 2.2 score: 17.3 coord: 174..200 e-value: 67.0 score: 12.4 coord: 319..344 e-value: 5800.0 score: 1.8
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 54..381 e-value: 1.8E-101 score: 339.4
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 231..244
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 18..397 e-value: 2.8E-107 score: 361.3
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 13..394
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 13..394
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 20..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g001820.1	Lcy12g001820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity