Lcy12g001620 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g001620
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUlp1-like peptidase
LocationChr12: 3249748 .. 3251365 (-)
RNA-Seq ExpressionLcy12g001620
SyntenyLcy12g001620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTACGAAGTCACGGGAAACCGACGAGGACGTTCATACAAATACGTGGCAGCCTGGCAGCCTGACGTGTCCCCCCTGTCTCCTGATCCGCAGTGGTTGCTCTTCAACCCCATGGTGGTAATTATGAGCCCAATCGGGGCAACGCACCGAGCTGCTAAGATGGGTAGTCAACCCCGCAAAGTGACAATTGCAAAGTTCGGCTGACTGGGTATACGAACGGTTTCCATCCCGTGGTTTCCAAACAAGGGTTTCGGCTCACCTGGTTGGATTTGTCCCCATTCAAGGAATTCCAACCGTTTGGATTAAATTGAATTTGAAGTTCCGCTTCATTGTATTAAATCAAAGAAAACCAACCATACTCCTGTATTCCCACTCATCACTCAGTGAGATGAAACACGATTTTTATTGTCTTTCTAGCCTTGAACGAACACAATCCGAACGGCTCAGGAAGGATAACACAGAACGAAATCGACTGTTCATCAGATCCTGGTAAGCATTCACTAACTAATATTCTAGTTTACTTTCTTTGTGTAAAAAAATGTGTATTCGGTCGAAATGAATTTAGGGCTATCGTTGTTCGTTGTCTCCGATTGGATGGGTGGGGTGGGGGGGGGGGGAGGGCAGATGATTGATATATCTAATGATAGGGGAGATAATCGTAGGAAAGGGGAAAGGGGGGGACATTATATACAGGACATCTAGTTTTGATTACATTGTCGTTCACTCTAGTCGTATTCGGATTGTCGTTACGTTCCGTCGTCAGTTAGGTAGAATTGTGCAGATGTTTTATATGTGCGCGACTTTGGGTATAGTTCTAAGCCAGAATTGTAAGCTTGAATCGTTGTGTATAGTTGTAAGCCAGAATGGTTGGGTATAATTGATAGGTAGAATTGTTGGGTATAATTGGAAGCCCGAATAGTTGGGTATATAAGCCCCAATCGTTGGATTCTTCTTATGATGTCAGACTCAACAGGATGATGGCACCCACATGGAAGATTAAACCCACTGATCGCTTCCCCGGTCAAGGTACGTGTCTGTCTCACATAAGCAGTGCCAACCAGGCCGTGAAAAGCAAGCTGACCACGACTCAATTTGAGTCGTTCAAAACTGGTACTATATTCGACCACCTACTTGATGTTGACTCGTCTTCAACAGTCAGGTCGTCCATCACATATTGCTGAGGGAGGTAGACGACGATAAACCTGAAGTAATGAGCTTCAATCTGAGGGGCACGGTTGTGTCGTTTTTTAAGGAGGAATTCATGTTGATGACTGGGCTGTGGGGGAGTGGGAGTGGTATTGGTGATGTGCAGAGAGGTGAATCCACTGTGGACCTGCAGGCCAAATACTTTGGATCGTGTCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATACGGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTAGTGTACTACACGGAGATGATGATGTTGGGAAAAGACAAACAAAAGACATCGGTCGACGAATCGTTGTTCTGGGAAGTGGAGGATTTGGCACACTTCAACAGCATTGACTTTGGCACACTTCAACAGCATTCACTGGGGTACCAGAATATGGGAGAGGACGATTAA

mRNA sequence

ATGAAGTACGAAGTCACGGGAAACCGACGAGGACGTTCATACAAATACGTGGCAGCCTGGCAGCCTGACGTGTCCCCCCTGTCTCCTGATCCGCAGTGGTTGCTCTTCAACCCCATGGTGGTCGTCCATCACATATTGCTGAGGGAGGTAGACGACGATAAACCTGAAGTAATGAGCTTCAATCTGAGGGGCACGGTTGTGTCGTTTTTTAAGGAGGAATTCATGTTGATGACTGGGCTGTGGGGGAGTGGGAGTGGTATTGGTGATGTGCAGAGAGGTGAATCCACTGTGGACCTGCAGGCCAAATACTTTGGATCGTGTCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATACGGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTAGTGTACTACACGGAGATGATGATGTTGGGAAAAGACAAACAAAAGACATCGGTCGACGAATCGTTGTTCTGGGAAGTGGAGGATTTGGCACACTTCAACAGCATTGACTTTGGCACACTTCAACAGCATTCACTGGGGTACCAGAATATGGGAGAGGACGATTAA

Coding sequence (CDS)

ATGAAGTACGAAGTCACGGGAAACCGACGAGGACGTTCATACAAATACGTGGCAGCCTGGCAGCCTGACGTGTCCCCCCTGTCTCCTGATCCGCAGTGGTTGCTCTTCAACCCCATGGTGGTCGTCCATCACATATTGCTGAGGGAGGTAGACGACGATAAACCTGAAGTAATGAGCTTCAATCTGAGGGGCACGGTTGTGTCGTTTTTTAAGGAGGAATTCATGTTGATGACTGGGCTGTGGGGGAGTGGGAGTGGTATTGGTGATGTGCAGAGAGGTGAATCCACTGTGGACCTGCAGGCCAAATACTTTGGATCGTGTCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATACGGACAATGTGGTATTCGACAATGACGAGGATGCAGTTAAGGTGTCATTAGTGTACTACACGGAGATGATGATGTTGGGAAAAGACAAACAAAAGACATCGGTCGACGAATCGTTGTTCTGGGAAGTGGAGGATTTGGCACACTTCAACAGCATTGACTTTGGCACACTTCAACAGCATTCACTGGGGTACCAGAATATGGGAGAGGACGATTAA

Protein sequence

MKYEVTGNRRGRSYKYVAAWQPDVSPLSPDPQWLLFNPMVVVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQAKYFGSCPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESLFWEVEDLAHFNSIDFGTLQQHSLGYQNMGEDD
Homology
[Close]
BLAST of Lcy12g001620 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 72/136 (52.94%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V R E+T  L 
Sbjct: 62  LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KPVPRVEATKSLG 121

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 122 TKYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 181

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 182 LDDVEDLKYYNSLDWG 194

[Close]
BLAST of Lcy12g001620 vs. ExPASy TrEMBL
Match: A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.7e-28
Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V+R E++  L 
Sbjct: 68  LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KSVRRVEASKSLG 127

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 128 TKYFGNELVVDMNPITFEERY-KNLNFCDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 187

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 188 LDDVEDLKYYNSLDWG 200

[Close]
BLAST of Lcy12g001620 vs. ExPASy TrEMBL
Match: A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.7e-28
Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V+R E++  L 
Sbjct: 145 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KSVRRVEASKSLG 204

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 205 TKYFGNELVVDMNPITFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 264

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 265 LDDVEDLKYYNSLDWG 277

[Close]
BLAST of Lcy12g001620 vs. ExPASy TrEMBL
Match: A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.7e-28
Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V+R E++  L 
Sbjct: 143 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KSVRRVEASKSLG 202

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 203 TKYFGNELVVDMNPITFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 262

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 263 LDDVEDLKYYNSLDWG 275

[Close]
BLAST of Lcy12g001620 vs. ExPASy TrEMBL
Match: A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28
Identity = 69/136 (50.74%), Postives = 101/136 (74.26%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VH+ LLREV D +P+VM F++ GT+V+F K EF+LMTGLW S   +  +Q+  S   L+
Sbjct: 62  LVHYFLLREVVDTRPDVMRFDILGTIVTFSKAEFLLMTGLWRSSGRV--LQKKVSKNRLR 121

Query: 101 AKYFGSCPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESLF 160
            +YF     D+ L  FE+EY   +VF ND+DAVKVSL+YYTE++M+GK+K K++VD+ L+
Sbjct: 122 REYFKDV-VDLRLEEFEQEY-KKIVFANDDDAVKVSLIYYTEIVMMGKNKGKSNVDKDLY 181

Query: 161 WEVEDLAHFNSIDFGT 177
            +VEDL +FN++D+GT
Sbjct: 182 GQVEDLDYFNNMDWGT 193

[Close]
BLAST of Lcy12g001620 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-28
Identity = 72/136 (52.94%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V R E+T  L 
Sbjct: 62  LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KPVPRVEATKSLG 121

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 122 TKYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 181

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 182 LDDVEDLKYYNSLDWG 194

[Close]
BLAST of Lcy12g001620 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-28
Identity = 72/136 (52.94%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V R E+T  L 
Sbjct: 145 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KPVPRVEATKSLG 204

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 205 TKYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 264

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 265 LDDVEDLKYYNSLDWG 277

[Close]
BLAST of Lcy12g001620 vs. NCBI nr
Match: XP_011654656.1 (uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-28
Identity = 72/136 (52.94%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V R E+T  L 
Sbjct: 145 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KPVPRVEATKSLG 204

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 205 TKYFGNELVVDMNPLTFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 264

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 265 LDDVEDLKYYNSLDWG 277

[Close]
BLAST of Lcy12g001620 vs. NCBI nr
Match: XP_008437500.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-28
Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V+R E++  L 
Sbjct: 145 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KSVRRVEASKSLG 204

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 205 TKYFGNELVVDMNPITFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 264

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 265 LDDVEDLKYYNSLDWG 277

[Close]
BLAST of Lcy12g001620 vs. NCBI nr
Match: XP_008437501.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo])

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-28
Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 0 

Query: 41  VVHHILLREVDDDKPEVMSFNLRGTVVSFFKEEFMLMTGLWGSGSGIGDVQRGESTVDLQ 100
           +VHHILLREV D++P+ MSFNL G + +F KEEF+L+TGLW S +    V+R E++  L 
Sbjct: 143 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KSVRRVEASKSLG 202

Query: 101 AKYFGS-CPTDMSLSTFEKEYTDNVVFDNDEDAVKVSLVYYTEMMMLGKDKQKTSVDESL 160
            KYFG+    DM+  TFE+ Y  N+ F +D DAVKV+LVYYTE+ M+GKD+ K+ +++SL
Sbjct: 203 TKYFGNELVVDMNPITFEERY-KNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSL 262

Query: 161 FWEVEDLAHFNSIDFG 176
             +VEDL ++NS+D+G
Sbjct: 263 LDDVEDLKYYNSLDWG 275

The following BLAST results are available for this feature:
BLAST of Lcy12g001620 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy12g001620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM591.3e-2852.94DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... [more]
A0A5A7TGU01.7e-2852.21Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... [more]
A0A1S3ATU81.7e-2852.21uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3AUB01.7e-2852.21uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1DSS52.2e-2850.74uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Lcy12g001620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49944.12.7e-2852.94hypothetical protein Csa_000148 [Cucumis sativus][more]
XP_031741885.12.7e-2852.94uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus][more]
XP_011654656.12.7e-2852.94uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus][more]
XP_008437500.13.5e-2852.21PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo][more]
XP_008437501.13.5e-2852.21PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo][more]
BLAST of Lcy12g001620 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g001620.1Lcy12g001620.1mRNA