Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTACCACAACCAACTCTCCCTTCTCTAACTCACAGGTATTTCGCCATTCCCTTGAATCTCTAAACCCATCACCGATACCCTTTCTTTTGTTAAGAAAACTTACACAACTTGCTTCGCTTTTCTGCGTTTCTCCCTCCAATTTCTACCCCAGAAATTGGGCCAACACCAAAAGATCACTGAAGAATCAATTCAGAGCCATTGCGCTGGTAAGTTTGCTCTCCATTCAAAGCTGGGTTCATTTCTGTACTTTTTATGCTCTGTTTGATTGCAGAAAAAACTTTGGAAAAGATTTGAAACCGAAATCTCGACTCTATTATGCTTTTGGTTCTAGTTGGTTCATCCCCATGTTTGAATAGTTCTATATTCCTTTGTTTTATCACAGACCCAGAAATTGACTGCTGACTTATGGTTTGAATTTCTTTTGAATCCTCTTTTTCGAGATGTTTTGTGATTAAAAAGAATGGGTTAGTGATTAATCGTTGAGTATTTACTTGTTTCCTGTTAAGTTATGTGTTGATTCTGGCAGAGATGGAGGTTTCAACTTCAGGATATATACAAAGATCAACTCTCCACCAAGCACCACTTTGTTCATGTTGTCGAAGGGTAAGAGGAGAAAATAATATTATTTACTCTGCTTTACTCTTTAGAAGAATTTGATGGTATTTGAAATGTGTATTTTCAAGCCTTAATGACTGAAAAGGGGTTTTGTGGGCTTACCAACTGTTATGATGGGTTCCACTCCCAGGATTGTAGCATTCTGAGTTGAAATTGTTAAAAGTATTTGTTTCTAGTTCCACAGCAAGTTACCAACTGAAGTAGTTGTTGCTAGTACTTGGATTCTAAGAACTTAGTTGTCAAAATGTAATGATTTGCTGTGTAATATATCAAAGTTTTTTGAGAACTTTACCTTATTCAAAGTTTCAAATCAACCATATGGTAGGAGCGAGAGCTTGACTTCGATTTCGAATCAGAATGGAGCTCCTACACATTCCATTTTCATAGCTAATAGGAAGATAATGGACACGGATCTAGAACACAAGGGGCAGGATATCAAGATTCAAAACCCTCGAGCGGTAAGCAAAAGCTTGTATTCCTTTCCTATTTCTAAGCGATGTTCTAAACTCCTCTGCAGGTTAATTTCATGACTGTCCTTTTTGTCGTTTCTACTTTTTGCTTCTTGTTGAATTTCCTCAGAAAGAAATTGATGGCTCAAAACTTTTTCATAGCAATTATTTTCCTAAACTATTGATTATATTTCGATAAACTCTTATAGCATGGTTATGTAGTATGAATGATGATTACTTCTGGAATTGAACTTTATCTTGCAACCTAATGGATAATGGTTTCTATAGGCTAAACTATAAAATAGCTGCAACCTAATTACTAAAGGTTTAGATCTTTAAAAATGTTAATATCCATGTGAATTGTAGCCCAACACAATTGAGGTAAAAATTCAAATCCCATGTGATTTTAAACTAGATTTTCGTCAAATGAGTTGTATTTTATTTATTTATTTATTTATTTTTTTGAAGAATTGACAAAATTACTTAAACCATACTGAACTGCAATTTCTGGCCCATCACAATTAACGTAAAGAAACAAATCACAATCATGGGGTAGAAGTATCATCATATTTAATTATGATACTGCAGTAGGTTGTGAGACTAGCTAGCCTTTGAAATGCTACTGGCTTGGTCAATGATCGCTTCACTAGATATCCATCCTCAGATCTTGTTTGCGGCCTGGAACCTTAACAAGTTGGACCTTTTCTCTTTTGGGGGAGGGGGAACAACATAAAAAATGTAAACTGGTATGGGCCGGGAGTGGTGGTAATGTCTGCCGGCATATGAGAAAAGCCTAATAGATATCAATTTTGTTAGACTTAAAACATCTTCAACCTGGTTAAGGCTTATTCTTGGGGGTTTGCCAGATTCCAGTCTTGCAGATTTTGAGTGTTTCAGCGTAAGTTCTTGAAGAGAGAAACCTAGTTGAATTTTAGTTTGCGCACCTGAGCTACATGTGAAGAATTTTGGTATATATTGCCACAAGAGTCAAGTTCAAATTTCCATTTAGTTTAGAAGAAGATATCACATCAATAAAGTATTAAGTAATTAATCAAATTTTATTGATGTTATGATGAGCTCCACTCCCAGGATTGTATCATTCTGAGTTGTTTAAGGACGTTTTCAATTCAAGATTGAATTATTGCTCTTAGCTTCTTTCTTATGTTCTACATAATCACTGCAGATTAGAGATAGATATCAATTGCAAGAAAAGCTTCAGAGTTCTTTGAATAGACTTCGTAAATATAAAACGCTTGGCATACTTGCTACCCCTCGACTACCTCCTGTAAGTTTCTTTTTCTCACCAGAAACTAATTTTCTTCTTTCGTTCAGAACTATGTCTAAACTTACACATATCACCTCTACCTACTCATTTGATACTTCAACAAACTTATCTGTTCTCTCTTTTTACCTCTTTTCTTTTTTCTCTGTCAGGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGGAACATCGGGGCTTAAAACCGCTAATAAACGAGAGGGAGAACGTCACAAGTTCAGAAGTGGGCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTCGGATTCTGAGTCATCCATAGATTCAACTGTAAGTAATGTAACTTTTTGCTCCTATTTTTACCTCAATTCACGCTTATATGAAGTTGTTTTTGTTTAGAGTGTTTTCTTGAGCATGGCGTTTCTGTATTTCTTCAACTGGGGCAGAGGTAATACTTGCAATGAGAAATGGGAGCGAAATTTTCTACTAATGAAGTTGTTGAATGGTTGCTTTCATTTCTCTGAGTACCCAACTCCCAAGCCTTTTCCAGTTGATCATTCATTTTTGTCTATTCCTAGTGGAGTTCTCTGTCCATCCACTTCCCTTTCGTCTGGTTAGCCTCATCTTTTTGTTTCAATCAGATGATAATACTGCCAAAATGGTAAACTATCTTACAGATAACAACATTGGATTTGCACATGGGTGGGGTGACCACACAGGCAAGCAGAGATCTGCAGTTTTACCTTTTTCCATCAAACCCAGCATCTTTGTTTTGTTGGAGAAACTTGGGAAAACTCAGCTGTTCTACTTGACCCTCAATCCTAATACTCAATAGAAAGAAGGGAACAAGGCAGAATATGTTCTTGAGAGTGGGTTTCAACATGGCAAAAACTGTAATTGCTATAAAAAAATTATAAAAATACAGCATATGTAGGAAGTATCTTAAAAAATATGCTTCATTTCAAAACAATAACCTTGAAAATCATTCTAAACTCAGCTGAACCTGTTGCGCATTAAATTTTTTTAAAAAAATCTTGGCTATTAATTCTTGCTCTGTTGTTCTAGATATAAGAGAGAGAGAGCTGCATGTGTTTGCCTGATTCTAGCTTCGAGAGTATTCATTTGTCTTCTAGCCTCCATTTTCAAAAGGCAAAAGTTCTCGTTTCGGTAATAGTTTATAGTTATTGTTTTGCAGAGTCCTTCAGAAGAAGAACAGATCTCAGTTGAAGATTTGTCCCATGCTTACAGGAAACTGGACCAAGATTACGAAAAGTTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAAGAATAG
mRNA sequence
ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTACCACAACCAACTCTCCCTTCTCTAACTCACAGAAATTGGGCCAACACCAAAAGATCACTGAAGAATCAATTCAGAGCCATTGCGCTGAGATGGAGGTTTCAACTTCAGGATATATACAAAGATCAACTCTCCACCAAGCACCACTTTGTTCATGTTGTCGAAGGGAGCGAGAGCTTGACTTCGATTTCGAATCAGAATGGAGCTCCTACACATTCCATTTTCATAGCTAATAGGAAGATAATGGACACGGATCTAGAACACAAGGGGCAGGATATCAAGATTCAAAACCCTCGAGCGATTAGAGATAGATATCAATTGCAAGAAAAGCTTCAGAGTTCTTTGAATAGACTTCGTAAATATAAAACGCTTGGCATACTTGCTACCCCTCGACTACCTCCTGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGGAACATCGGGGCTTAAAACCGCTAATAAACGAGAGGGAGAACGTCACAAGTTCAGAAGTGGGCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTCGGATTCTGAGTCATCCATAGATTCAACTAGTCCTTCAGAAGAAGAACAGATCTCAGTTGAAGATTTGTCCCATGCTTACAGGAAACTGGACCAAGATTACGAAAAGTTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAAGAATAG
Coding sequence (CDS)
ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTACCACAACCAACTCTCCCTTCTCTAACTCACAGAAATTGGGCCAACACCAAAAGATCACTGAAGAATCAATTCAGAGCCATTGCGCTGAGATGGAGGTTTCAACTTCAGGATATATACAAAGATCAACTCTCCACCAAGCACCACTTTGTTCATGTTGTCGAAGGGAGCGAGAGCTTGACTTCGATTTCGAATCAGAATGGAGCTCCTACACATTCCATTTTCATAGCTAATAGGAAGATAATGGACACGGATCTAGAACACAAGGGGCAGGATATCAAGATTCAAAACCCTCGAGCGATTAGAGATAGATATCAATTGCAAGAAAAGCTTCAGAGTTCTTTGAATAGACTTCGTAAATATAAAACGCTTGGCATACTTGCTACCCCTCGACTACCTCCTGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGGAACATCGGGGCTTAAAACCGCTAATAAACGAGAGGGAGAACGTCACAAGTTCAGAAGTGGGCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTCGGATTCTGAGTCATCCATAGATTCAACTAGTCCTTCAGAAGAAGAACAGATCTCAGTTGAAGATTTGTCCCATGCTTACAGGAAACTGGACCAAGATTACGAAAAGTTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAAGAATAG
Protein sequence
MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNPRAIRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCIIGASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Homology
BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match:
A0A5A7T6Z4 (LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00440 PE=4 SV=1)
HSP 1 Score: 410.2 bits (1053), Expect = 6.8e-111
Identity = 215/282 (76.24%), Postives = 238/282 (84.40%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
MEVK+ QRNRA RFS LLP PTLPSLT RNWANTK+S NQ R I+LRWRFQL D
Sbjct: 1 MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60
Query: 61 IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
+ K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTDLE KGQ+IKIQN
Sbjct: 61 VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNS 120
Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
RA IRD +QL+EKLQS+LN L+ YK L LA+ RLPPARTTS IVLVPL++FC RCII
Sbjct: 121 RAVSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180
Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
GASYARVFGT LK NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDSTSPS +EQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQ 240
Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
ISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match:
A0A1S3CBV5 (uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)
HSP 1 Score: 410.2 bits (1053), Expect = 6.8e-111
Identity = 214/282 (75.89%), Postives = 238/282 (84.40%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
MEVK+ QRNRA RFS LLP PTLPSLT RNWANTK+S NQ R I+LRWRFQL D
Sbjct: 1 MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60
Query: 61 IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
+ K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTD E KGQ+IKIQNP
Sbjct: 61 VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120
Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
R IRD +QL+EKLQ++LN L+ YK L LA+ RLPPARTTS IVLVPL++FC RCII
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180
Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
GASYARVFGT LK NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDSTSPSE+EQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240
Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
ISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match:
A0A6J1CKQ6 (uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)
HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109
Identity = 214/272 (78.68%), Postives = 228/272 (83.82%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIY 60
ME+K+SQRNRADRFSLLPKLLPQPTLPS THR WA KRS KNQF A+ALRWRFQLQDI
Sbjct: 1 MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60
Query: 61 KDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNPRA 120
+DQ TKHHFV +VEG E+ TSI QNG THSI I NRKI DTDLEHKGQD KI+NP A
Sbjct: 61 RDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNPLA 120
Query: 121 IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCIIGASYA 180
IRD YQLQEKLQSSLN L+ YK L + +PRLPPARTTS IVLVPLIVFCARCIIGASYA
Sbjct: 121 IRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGASYA 180
Query: 181 RVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSID---STSPSEEEQIS 240
RV TS LKT +K EGE HKFRSGHWRSALRDIRELDG DSESS D S SPS +EQIS
Sbjct: 181 RVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQIS 240
Query: 241 VEDLSHAYRKLDQDYEKFLSECGLSKWGYWRG 270
VEDLSHAY+KLD+DYEKFLSECGLS GYWRG
Sbjct: 241 VEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 272
BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match:
A0A6J1CK58 (uncharacterized protein LOC111012032 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)
HSP 1 Score: 403.7 bits (1036), Expect = 6.3e-109
Identity = 213/274 (77.74%), Postives = 228/274 (83.21%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIY 60
ME+K+SQRNRADRFSLLPKLLPQPTLPS THR WA KRS KNQF A+ALRWRFQLQDI
Sbjct: 1 MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60
Query: 61 KDQLSTKHHFVHVVEG-----SESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKI 120
+DQ TKHHFV +VEG E+ TSI QNG THSI I NRKI DTDLEHKGQD KI
Sbjct: 61 RDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKI 120
Query: 121 QNPRAIRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
+NP AIRD YQLQEKLQSSLN L+ YK L + +PRLPPARTTS IVLVPLIVFCARCII
Sbjct: 121 RNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCII 180
Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
GASYARV TS LKT +K EGE HKFRSGHWRSALRDIRELDG DSESS D +SPS +EQ
Sbjct: 181 GASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSSPSVDEQ 240
Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRG 270
ISVEDLSHAY+KLD+DYEKFLSECGLS GYWRG
Sbjct: 241 ISVEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 274
BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match:
A0A1S3CB50 (uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)
HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 214/290 (73.79%), Postives = 238/290 (82.07%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
MEVK+ QRNRA RFS LLP PTLPSLT RNWANTK+S NQ R I+LRWRFQL D
Sbjct: 1 MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60
Query: 61 IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
+ K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTD E KGQ+IKIQNP
Sbjct: 61 VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120
Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPP--------ARTTSLIVLVPLI 180
R IRD +QL+EKLQ++LN L+ YK L LA+ RLPP ARTTS IVLVPL+
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPVNFFFSPEARTTSFIVLVPLV 180
Query: 181 VFCARCIIGASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDS 240
+FC RCIIGASYARVFGT LK NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDS
Sbjct: 181 IFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDS 240
Query: 241 TSPSEEEQISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
TSPSE+EQISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 TSPSEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 286
BLAST of Lcy12g001380 vs. NCBI nr
Match:
XP_038890844.1 (uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida])
HSP 1 Score: 451.1 bits (1159), Expect = 7.1e-123
Identity = 231/278 (83.09%), Postives = 247/278 (88.85%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLT-HRNWANTKRSLKNQFRAIALRWRFQLQDI 60
MEVKLSQRNRADRF L PKLLPQPTLPSLT HRNWANT++SLKNQFRAI LRWRFQLQDI
Sbjct: 1 MEVKLSQRNRADRFFLFPKLLPQPTLPSLTHHRNWANTRKSLKNQFRAITLRWRFQLQDI 60
Query: 61 YKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNPR 120
K+QLSTKHH VH+VEGSESLT NQNG PTHSI +AN++I DTDLE KGQ+IKIQNPR
Sbjct: 61 SKNQLSTKHHLVHIVEGSESLTLNPNQNGDPTHSISVANKRIKDTDLEQKGQNIKIQNPR 120
Query: 121 AIRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCIIGASY 180
AIRD YQL+EKLQS+LN LR YK L LA+ LPPARTTS IVLVPLIVFCARCIIGASY
Sbjct: 121 AIRDVYQLEEKLQSALNELRNYKKLFALASSHLPPARTTSFIVLVPLIVFCARCIIGASY 180
Query: 181 ARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQISVE 240
ARVFGTS L+T +KREG+ HKFRSGHWRSALRDIRELDG D ES IDS SPSE+EQIS E
Sbjct: 181 ARVFGTSRLETVDKREGKHHKFRSGHWRSALRDIRELDGLDCESPIDSMSPSEDEQISDE 240
Query: 241 DLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
DLSH Y+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHDYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
BLAST of Lcy12g001380 vs. NCBI nr
Match:
KAA0039254.1 (uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00440.1 uncharacterized protein E5676_scaffold169G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-110
Identity = 215/282 (76.24%), Postives = 238/282 (84.40%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
MEVK+ QRNRA RFS LLP PTLPSLT RNWANTK+S NQ R I+LRWRFQL D
Sbjct: 1 MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60
Query: 61 IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
+ K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTDLE KGQ+IKIQN
Sbjct: 61 VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNS 120
Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
RA IRD +QL+EKLQS+LN L+ YK L LA+ RLPPARTTS IVLVPL++FC RCII
Sbjct: 121 RAVSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180
Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
GASYARVFGT LK NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDSTSPS +EQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQ 240
Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
ISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
BLAST of Lcy12g001380 vs. NCBI nr
Match:
XP_008459633.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])
HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-110
Identity = 214/282 (75.89%), Postives = 238/282 (84.40%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
MEVK+ QRNRA RFS LLP PTLPSLT RNWANTK+S NQ R I+LRWRFQL D
Sbjct: 1 MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60
Query: 61 IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
+ K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTD E KGQ+IKIQNP
Sbjct: 61 VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120
Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
R IRD +QL+EKLQ++LN L+ YK L LA+ RLPPARTTS IVLVPL++FC RCII
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180
Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
GASYARVFGT LK NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDSTSPSE+EQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240
Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
ISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
BLAST of Lcy12g001380 vs. NCBI nr
Match:
XP_022141747.1 (uncharacterized protein LOC111012032 isoform X3 [Momordica charantia])
HSP 1 Score: 406.0 bits (1042), Expect = 2.6e-109
Identity = 214/272 (78.68%), Postives = 228/272 (83.82%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIY 60
ME+K+SQRNRADRFSLLPKLLPQPTLPS THR WA KRS KNQF A+ALRWRFQLQDI
Sbjct: 1 MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60
Query: 61 KDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNPRA 120
+DQ TKHHFV +VEG E+ TSI QNG THSI I NRKI DTDLEHKGQD KI+NP A
Sbjct: 61 RDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNPLA 120
Query: 121 IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCIIGASYA 180
IRD YQLQEKLQSSLN L+ YK L + +PRLPPARTTS IVLVPLIVFCARCIIGASYA
Sbjct: 121 IRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGASYA 180
Query: 181 RVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSID---STSPSEEEQIS 240
RV TS LKT +K EGE HKFRSGHWRSALRDIRELDG DSESS D S SPS +EQIS
Sbjct: 181 RVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQIS 240
Query: 241 VEDLSHAYRKLDQDYEKFLSECGLSKWGYWRG 270
VEDLSHAY+KLD+DYEKFLSECGLS GYWRG
Sbjct: 241 VEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 272
BLAST of Lcy12g001380 vs. NCBI nr
Match:
XP_022141746.1 (uncharacterized protein LOC111012032 isoform X2 [Momordica charantia])
HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 213/274 (77.74%), Postives = 228/274 (83.21%), Query Frame = 0
Query: 1 MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIY 60
ME+K+SQRNRADRFSLLPKLLPQPTLPS THR WA KRS KNQF A+ALRWRFQLQDI
Sbjct: 1 MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60
Query: 61 KDQLSTKHHFVHVVEG-----SESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKI 120
+DQ TKHHFV +VEG E+ TSI QNG THSI I NRKI DTDLEHKGQD KI
Sbjct: 61 RDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKI 120
Query: 121 QNPRAIRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
+NP AIRD YQLQEKLQSSLN L+ YK L + +PRLPPARTTS IVLVPLIVFCARCII
Sbjct: 121 RNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCII 180
Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
GASYARV TS LKT +K EGE HKFRSGHWRSALRDIRELDG DSESS D +SPS +EQ
Sbjct: 181 GASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSSPSVDEQ 240
Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRG 270
ISVEDLSHAY+KLD+DYEKFLSECGLS GYWRG
Sbjct: 241 ISVEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 274
BLAST of Lcy12g001380 vs. TAIR 10
Match:
AT4G09970.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 62/233 (26.61%), Postives = 108/233 (46.35%), Query Frame = 0
Query: 44 QFRAIALRWRFQLQDIYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHS--IFIANRKI 103
+F+ + R RF +Q + +++ TKH + SESL I Q G + + ++
Sbjct: 28 RFKRASERCRFCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEESKTSSRL 87
Query: 104 MDTDLEHKGQDIKIQNPRAIRDRYQLQEKLQSSLNRLRKY-KTLGILAT------PRLPP 163
D D E K D + + E+L L R+ KY +T+G LP
Sbjct: 88 DDLDCEEK-HDAVTSSVIDDDSKMNTTEEL-PDLRRVEKYTETVGTADNLSGQNHQILPH 147
Query: 164 ARTTSLIV-LVPLIVFCARCIIGASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDI 223
T L+ L+P++ FC CIIG + + +++ + H S WR+AL D
Sbjct: 148 LNTGVLLTSLLPVLGFCIICIIGTLHTII---------SRKTSQGHHHGSERWRTALMDW 207
Query: 224 RE---LDGSDSESSIDSTSPSEEEQISVEDLSHAYRKLDQDYEKFLSECGLSK 264
E DG DS S + + +E + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 208 NEPLASDGHDSMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGVGE 249
BLAST of Lcy12g001380 vs. TAIR 10
Match:
AT4G09970.2 (unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 57.0 bits (136), Expect = 2.8e-08
Identity = 61/223 (27.35%), Postives = 102/223 (45.74%), Query Frame = 0
Query: 51 RWRFQLQDIYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHS--IFIANRKIMDTDLEH 110
+W F +Q + +++ TKH + SESL I Q G + + ++ D D E
Sbjct: 4 KW-FCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEESKTSSRLDDLDCEE 63
Query: 111 KGQDIKIQNPRAIRDRYQLQEKLQSSLNRLRKY-KTLGILAT------PRLPPARTTSLI 170
K D + + E+L L R+ KY +T+G LP T L+
Sbjct: 64 K-HDAVTSSVIDDDSKMNTTEEL-PDLRRVEKYTETVGTADNLSGQNHQILPHLNTGVLL 123
Query: 171 V-LVPLIVFCARCIIGASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSD 230
L+P++ FC CIIG + + +++ + H S WR+AL D E SD
Sbjct: 124 TSLLPVLGFCIICIIGTLHTII---------SRKTSQGHHHGSERWRTALMDWNEPLASD 183
Query: 231 SESSIDSTSPSEEEQISVEDLSHAYRKLDQDYEKFLSECGLSK 264
DS SP E + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 184 GH---DSMSPEYREATATDEMNEAYSRVELEYKRFLLECGVGE 211
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T6Z4 | 6.8e-111 | 76.24 | LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A1S3CBV5 | 6.8e-111 | 75.89 | uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1CKQ6 | 1.3e-109 | 78.68 | uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CK58 | 6.3e-109 | 77.74 | uncharacterized protein LOC111012032 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A1S3CB50 | 1.1e-108 | 73.79 | uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
XP_038890844.1 | 7.1e-123 | 83.09 | uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida] | [more] |
KAA0039254.1 | 1.4e-110 | 76.24 | uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00... | [more] |
XP_008459633.1 | 1.4e-110 | 75.89 | PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo] | [more] |
XP_022141747.1 | 2.6e-109 | 78.68 | uncharacterized protein LOC111012032 isoform X3 [Momordica charantia] | [more] |
XP_022141746.1 | 1.3e-108 | 77.74 | uncharacterized protein LOC111012032 isoform X2 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
AT4G09970.1 | 5.6e-09 | 26.61 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXP... | [more] |
AT4G09970.2 | 2.8e-08 | 27.35 | unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bact... | [more] |