Lcy12g001380 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g001380
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionLysM domain-containing protein
LocationChr12: 2649459 .. 2653253 (+)
RNA-Seq ExpressionLcy12g001380
SyntenyLcy12g001380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTACCACAACCAACTCTCCCTTCTCTAACTCACAGGTATTTCGCCATTCCCTTGAATCTCTAAACCCATCACCGATACCCTTTCTTTTGTTAAGAAAACTTACACAACTTGCTTCGCTTTTCTGCGTTTCTCCCTCCAATTTCTACCCCAGAAATTGGGCCAACACCAAAAGATCACTGAAGAATCAATTCAGAGCCATTGCGCTGGTAAGTTTGCTCTCCATTCAAAGCTGGGTTCATTTCTGTACTTTTTATGCTCTGTTTGATTGCAGAAAAAACTTTGGAAAAGATTTGAAACCGAAATCTCGACTCTATTATGCTTTTGGTTCTAGTTGGTTCATCCCCATGTTTGAATAGTTCTATATTCCTTTGTTTTATCACAGACCCAGAAATTGACTGCTGACTTATGGTTTGAATTTCTTTTGAATCCTCTTTTTCGAGATGTTTTGTGATTAAAAAGAATGGGTTAGTGATTAATCGTTGAGTATTTACTTGTTTCCTGTTAAGTTATGTGTTGATTCTGGCAGAGATGGAGGTTTCAACTTCAGGATATATACAAAGATCAACTCTCCACCAAGCACCACTTTGTTCATGTTGTCGAAGGGTAAGAGGAGAAAATAATATTATTTACTCTGCTTTACTCTTTAGAAGAATTTGATGGTATTTGAAATGTGTATTTTCAAGCCTTAATGACTGAAAAGGGGTTTTGTGGGCTTACCAACTGTTATGATGGGTTCCACTCCCAGGATTGTAGCATTCTGAGTTGAAATTGTTAAAAGTATTTGTTTCTAGTTCCACAGCAAGTTACCAACTGAAGTAGTTGTTGCTAGTACTTGGATTCTAAGAACTTAGTTGTCAAAATGTAATGATTTGCTGTGTAATATATCAAAGTTTTTTGAGAACTTTACCTTATTCAAAGTTTCAAATCAACCATATGGTAGGAGCGAGAGCTTGACTTCGATTTCGAATCAGAATGGAGCTCCTACACATTCCATTTTCATAGCTAATAGGAAGATAATGGACACGGATCTAGAACACAAGGGGCAGGATATCAAGATTCAAAACCCTCGAGCGGTAAGCAAAAGCTTGTATTCCTTTCCTATTTCTAAGCGATGTTCTAAACTCCTCTGCAGGTTAATTTCATGACTGTCCTTTTTGTCGTTTCTACTTTTTGCTTCTTGTTGAATTTCCTCAGAAAGAAATTGATGGCTCAAAACTTTTTCATAGCAATTATTTTCCTAAACTATTGATTATATTTCGATAAACTCTTATAGCATGGTTATGTAGTATGAATGATGATTACTTCTGGAATTGAACTTTATCTTGCAACCTAATGGATAATGGTTTCTATAGGCTAAACTATAAAATAGCTGCAACCTAATTACTAAAGGTTTAGATCTTTAAAAATGTTAATATCCATGTGAATTGTAGCCCAACACAATTGAGGTAAAAATTCAAATCCCATGTGATTTTAAACTAGATTTTCGTCAAATGAGTTGTATTTTATTTATTTATTTATTTATTTTTTTGAAGAATTGACAAAATTACTTAAACCATACTGAACTGCAATTTCTGGCCCATCACAATTAACGTAAAGAAACAAATCACAATCATGGGGTAGAAGTATCATCATATTTAATTATGATACTGCAGTAGGTTGTGAGACTAGCTAGCCTTTGAAATGCTACTGGCTTGGTCAATGATCGCTTCACTAGATATCCATCCTCAGATCTTGTTTGCGGCCTGGAACCTTAACAAGTTGGACCTTTTCTCTTTTGGGGGAGGGGGAACAACATAAAAAATGTAAACTGGTATGGGCCGGGAGTGGTGGTAATGTCTGCCGGCATATGAGAAAAGCCTAATAGATATCAATTTTGTTAGACTTAAAACATCTTCAACCTGGTTAAGGCTTATTCTTGGGGGTTTGCCAGATTCCAGTCTTGCAGATTTTGAGTGTTTCAGCGTAAGTTCTTGAAGAGAGAAACCTAGTTGAATTTTAGTTTGCGCACCTGAGCTACATGTGAAGAATTTTGGTATATATTGCCACAAGAGTCAAGTTCAAATTTCCATTTAGTTTAGAAGAAGATATCACATCAATAAAGTATTAAGTAATTAATCAAATTTTATTGATGTTATGATGAGCTCCACTCCCAGGATTGTATCATTCTGAGTTGTTTAAGGACGTTTTCAATTCAAGATTGAATTATTGCTCTTAGCTTCTTTCTTATGTTCTACATAATCACTGCAGATTAGAGATAGATATCAATTGCAAGAAAAGCTTCAGAGTTCTTTGAATAGACTTCGTAAATATAAAACGCTTGGCATACTTGCTACCCCTCGACTACCTCCTGTAAGTTTCTTTTTCTCACCAGAAACTAATTTTCTTCTTTCGTTCAGAACTATGTCTAAACTTACACATATCACCTCTACCTACTCATTTGATACTTCAACAAACTTATCTGTTCTCTCTTTTTACCTCTTTTCTTTTTTCTCTGTCAGGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGGAACATCGGGGCTTAAAACCGCTAATAAACGAGAGGGAGAACGTCACAAGTTCAGAAGTGGGCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTCGGATTCTGAGTCATCCATAGATTCAACTGTAAGTAATGTAACTTTTTGCTCCTATTTTTACCTCAATTCACGCTTATATGAAGTTGTTTTTGTTTAGAGTGTTTTCTTGAGCATGGCGTTTCTGTATTTCTTCAACTGGGGCAGAGGTAATACTTGCAATGAGAAATGGGAGCGAAATTTTCTACTAATGAAGTTGTTGAATGGTTGCTTTCATTTCTCTGAGTACCCAACTCCCAAGCCTTTTCCAGTTGATCATTCATTTTTGTCTATTCCTAGTGGAGTTCTCTGTCCATCCACTTCCCTTTCGTCTGGTTAGCCTCATCTTTTTGTTTCAATCAGATGATAATACTGCCAAAATGGTAAACTATCTTACAGATAACAACATTGGATTTGCACATGGGTGGGGTGACCACACAGGCAAGCAGAGATCTGCAGTTTTACCTTTTTCCATCAAACCCAGCATCTTTGTTTTGTTGGAGAAACTTGGGAAAACTCAGCTGTTCTACTTGACCCTCAATCCTAATACTCAATAGAAAGAAGGGAACAAGGCAGAATATGTTCTTGAGAGTGGGTTTCAACATGGCAAAAACTGTAATTGCTATAAAAAAATTATAAAAATACAGCATATGTAGGAAGTATCTTAAAAAATATGCTTCATTTCAAAACAATAACCTTGAAAATCATTCTAAACTCAGCTGAACCTGTTGCGCATTAAATTTTTTTAAAAAAATCTTGGCTATTAATTCTTGCTCTGTTGTTCTAGATATAAGAGAGAGAGAGCTGCATGTGTTTGCCTGATTCTAGCTTCGAGAGTATTCATTTGTCTTCTAGCCTCCATTTTCAAAAGGCAAAAGTTCTCGTTTCGGTAATAGTTTATAGTTATTGTTTTGCAGAGTCCTTCAGAAGAAGAACAGATCTCAGTTGAAGATTTGTCCCATGCTTACAGGAAACTGGACCAAGATTACGAAAAGTTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAAGAATAG

mRNA sequence

ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTACCACAACCAACTCTCCCTTCTCTAACTCACAGAAATTGGGCCAACACCAAAAGATCACTGAAGAATCAATTCAGAGCCATTGCGCTGAGATGGAGGTTTCAACTTCAGGATATATACAAAGATCAACTCTCCACCAAGCACCACTTTGTTCATGTTGTCGAAGGGAGCGAGAGCTTGACTTCGATTTCGAATCAGAATGGAGCTCCTACACATTCCATTTTCATAGCTAATAGGAAGATAATGGACACGGATCTAGAACACAAGGGGCAGGATATCAAGATTCAAAACCCTCGAGCGATTAGAGATAGATATCAATTGCAAGAAAAGCTTCAGAGTTCTTTGAATAGACTTCGTAAATATAAAACGCTTGGCATACTTGCTACCCCTCGACTACCTCCTGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGGAACATCGGGGCTTAAAACCGCTAATAAACGAGAGGGAGAACGTCACAAGTTCAGAAGTGGGCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTCGGATTCTGAGTCATCCATAGATTCAACTAGTCCTTCAGAAGAAGAACAGATCTCAGTTGAAGATTTGTCCCATGCTTACAGGAAACTGGACCAAGATTACGAAAAGTTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAAGAATAG

Coding sequence (CDS)

ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTACCACAACCAACTCTCCCTTCTCTAACTCACAGAAATTGGGCCAACACCAAAAGATCACTGAAGAATCAATTCAGAGCCATTGCGCTGAGATGGAGGTTTCAACTTCAGGATATATACAAAGATCAACTCTCCACCAAGCACCACTTTGTTCATGTTGTCGAAGGGAGCGAGAGCTTGACTTCGATTTCGAATCAGAATGGAGCTCCTACACATTCCATTTTCATAGCTAATAGGAAGATAATGGACACGGATCTAGAACACAAGGGGCAGGATATCAAGATTCAAAACCCTCGAGCGATTAGAGATAGATATCAATTGCAAGAAAAGCTTCAGAGTTCTTTGAATAGACTTCGTAAATATAAAACGCTTGGCATACTTGCTACCCCTCGACTACCTCCTGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGGAACATCGGGGCTTAAAACCGCTAATAAACGAGAGGGAGAACGTCACAAGTTCAGAAGTGGGCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTCGGATTCTGAGTCATCCATAGATTCAACTAGTCCTTCAGAAGAAGAACAGATCTCAGTTGAAGATTTGTCCCATGCTTACAGGAAACTGGACCAAGATTACGAAAAGTTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAAGAATAG

Protein sequence

MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNPRAIRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCIIGASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Homology
BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match: A0A5A7T6Z4 (LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00440 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.8e-111
Identity = 215/282 (76.24%), Postives = 238/282 (84.40%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
           MEVK+ QRNRA RFS    LLP PTLPSLT   RNWANTK+S  NQ R I+LRWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
           + K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTDLE KGQ+IKIQN 
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNS 120

Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
           RA   IRD +QL+EKLQS+LN L+ YK L  LA+ RLPPARTTS IVLVPL++FC RCII
Sbjct: 121 RAVSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180

Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
           GASYARVFGT  LK  NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDSTSPS +EQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQ 240

Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           ISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match: A0A1S3CBV5 (uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.8e-111
Identity = 214/282 (75.89%), Postives = 238/282 (84.40%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
           MEVK+ QRNRA RFS    LLP PTLPSLT   RNWANTK+S  NQ R I+LRWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
           + K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTD E KGQ+IKIQNP
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120

Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
           R    IRD +QL+EKLQ++LN L+ YK L  LA+ RLPPARTTS IVLVPL++FC RCII
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180

Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
           GASYARVFGT  LK  NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDSTSPSE+EQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240

Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           ISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match: A0A6J1CKQ6 (uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109
Identity = 214/272 (78.68%), Postives = 228/272 (83.82%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIY 60
           ME+K+SQRNRADRFSLLPKLLPQPTLPS THR WA  KRS KNQF A+ALRWRFQLQDI 
Sbjct: 1   MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60

Query: 61  KDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNPRA 120
           +DQ  TKHHFV +VEG E+ TSI  QNG  THSI I NRKI DTDLEHKGQD KI+NP A
Sbjct: 61  RDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNPLA 120

Query: 121 IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCIIGASYA 180
           IRD YQLQEKLQSSLN L+ YK L +  +PRLPPARTTS IVLVPLIVFCARCIIGASYA
Sbjct: 121 IRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGASYA 180

Query: 181 RVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSID---STSPSEEEQIS 240
           RV  TS LKT +K EGE HKFRSGHWRSALRDIRELDG DSESS D   S SPS +EQIS
Sbjct: 181 RVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQIS 240

Query: 241 VEDLSHAYRKLDQDYEKFLSECGLSKWGYWRG 270
           VEDLSHAY+KLD+DYEKFLSECGLS  GYWRG
Sbjct: 241 VEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 272

BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match: A0A6J1CK58 (uncharacterized protein LOC111012032 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 6.3e-109
Identity = 213/274 (77.74%), Postives = 228/274 (83.21%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIY 60
           ME+K+SQRNRADRFSLLPKLLPQPTLPS THR WA  KRS KNQF A+ALRWRFQLQDI 
Sbjct: 1   MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60

Query: 61  KDQLSTKHHFVHVVEG-----SESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKI 120
           +DQ  TKHHFV +VEG      E+ TSI  QNG  THSI I NRKI DTDLEHKGQD KI
Sbjct: 61  RDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKI 120

Query: 121 QNPRAIRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
           +NP AIRD YQLQEKLQSSLN L+ YK L +  +PRLPPARTTS IVLVPLIVFCARCII
Sbjct: 121 RNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCII 180

Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
           GASYARV  TS LKT +K EGE HKFRSGHWRSALRDIRELDG DSESS D +SPS +EQ
Sbjct: 181 GASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSSPSVDEQ 240

Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRG 270
           ISVEDLSHAY+KLD+DYEKFLSECGLS  GYWRG
Sbjct: 241 ISVEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 274

BLAST of Lcy12g001380 vs. ExPASy TrEMBL
Match: A0A1S3CB50 (uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 214/290 (73.79%), Postives = 238/290 (82.07%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
           MEVK+ QRNRA RFS    LLP PTLPSLT   RNWANTK+S  NQ R I+LRWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
           + K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTD E KGQ+IKIQNP
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120

Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPP--------ARTTSLIVLVPLI 180
           R    IRD +QL+EKLQ++LN L+ YK L  LA+ RLPP        ARTTS IVLVPL+
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPVNFFFSPEARTTSFIVLVPLV 180

Query: 181 VFCARCIIGASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDS 240
           +FC RCIIGASYARVFGT  LK  NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDS
Sbjct: 181 IFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDS 240

Query: 241 TSPSEEEQISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           TSPSE+EQISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 TSPSEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 286

BLAST of Lcy12g001380 vs. NCBI nr
Match: XP_038890844.1 (uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida])

HSP 1 Score: 451.1 bits (1159), Expect = 7.1e-123
Identity = 231/278 (83.09%), Postives = 247/278 (88.85%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLT-HRNWANTKRSLKNQFRAIALRWRFQLQDI 60
           MEVKLSQRNRADRF L PKLLPQPTLPSLT HRNWANT++SLKNQFRAI LRWRFQLQDI
Sbjct: 1   MEVKLSQRNRADRFFLFPKLLPQPTLPSLTHHRNWANTRKSLKNQFRAITLRWRFQLQDI 60

Query: 61  YKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNPR 120
            K+QLSTKHH VH+VEGSESLT   NQNG PTHSI +AN++I DTDLE KGQ+IKIQNPR
Sbjct: 61  SKNQLSTKHHLVHIVEGSESLTLNPNQNGDPTHSISVANKRIKDTDLEQKGQNIKIQNPR 120

Query: 121 AIRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCIIGASY 180
           AIRD YQL+EKLQS+LN LR YK L  LA+  LPPARTTS IVLVPLIVFCARCIIGASY
Sbjct: 121 AIRDVYQLEEKLQSALNELRNYKKLFALASSHLPPARTTSFIVLVPLIVFCARCIIGASY 180

Query: 181 ARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQISVE 240
           ARVFGTS L+T +KREG+ HKFRSGHWRSALRDIRELDG D ES IDS SPSE+EQIS E
Sbjct: 181 ARVFGTSRLETVDKREGKHHKFRSGHWRSALRDIRELDGLDCESPIDSMSPSEDEQISDE 240

Query: 241 DLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           DLSH Y+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHDYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

BLAST of Lcy12g001380 vs. NCBI nr
Match: KAA0039254.1 (uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00440.1 uncharacterized protein E5676_scaffold169G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-110
Identity = 215/282 (76.24%), Postives = 238/282 (84.40%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
           MEVK+ QRNRA RFS    LLP PTLPSLT   RNWANTK+S  NQ R I+LRWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
           + K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTDLE KGQ+IKIQN 
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNS 120

Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
           RA   IRD +QL+EKLQS+LN L+ YK L  LA+ RLPPARTTS IVLVPL++FC RCII
Sbjct: 121 RAVSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180

Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
           GASYARVFGT  LK  NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDSTSPS +EQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQ 240

Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           ISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

BLAST of Lcy12g001380 vs. NCBI nr
Match: XP_008459633.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])

HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-110
Identity = 214/282 (75.89%), Postives = 238/282 (84.40%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLT--HRNWANTKRSLKNQFRAIALRWRFQLQD 60
           MEVK+ QRNRA RFS    LLP PTLPSLT   RNWANTK+S  NQ R I+LRWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  IYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNP 120
           + K QLSTKHHFVH++EG+ESL SISN+NG P +SI I N+KI+DTD E KGQ+IKIQNP
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120

Query: 121 RA---IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
           R    IRD +QL+EKLQ++LN L+ YK L  LA+ RLPPARTTS IVLVPL++FC RCII
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180

Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
           GASYARVFGT  LK  NK+EGERHKFRSGHWRSALRDIRELDG D E+ IDSTSPSE+EQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240

Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           ISVEDLSHAY+KLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

BLAST of Lcy12g001380 vs. NCBI nr
Match: XP_022141747.1 (uncharacterized protein LOC111012032 isoform X3 [Momordica charantia])

HSP 1 Score: 406.0 bits (1042), Expect = 2.6e-109
Identity = 214/272 (78.68%), Postives = 228/272 (83.82%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIY 60
           ME+K+SQRNRADRFSLLPKLLPQPTLPS THR WA  KRS KNQF A+ALRWRFQLQDI 
Sbjct: 1   MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60

Query: 61  KDQLSTKHHFVHVVEGSESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKIQNPRA 120
           +DQ  TKHHFV +VEG E+ TSI  QNG  THSI I NRKI DTDLEHKGQD KI+NP A
Sbjct: 61  RDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNPLA 120

Query: 121 IRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCIIGASYA 180
           IRD YQLQEKLQSSLN L+ YK L +  +PRLPPARTTS IVLVPLIVFCARCIIGASYA
Sbjct: 121 IRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGASYA 180

Query: 181 RVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSID---STSPSEEEQIS 240
           RV  TS LKT +K EGE HKFRSGHWRSALRDIRELDG DSESS D   S SPS +EQIS
Sbjct: 181 RVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQIS 240

Query: 241 VEDLSHAYRKLDQDYEKFLSECGLSKWGYWRG 270
           VEDLSHAY+KLD+DYEKFLSECGLS  GYWRG
Sbjct: 241 VEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 272

BLAST of Lcy12g001380 vs. NCBI nr
Match: XP_022141746.1 (uncharacterized protein LOC111012032 isoform X2 [Momordica charantia])

HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 213/274 (77.74%), Postives = 228/274 (83.21%), Query Frame = 0

Query: 1   MEVKLSQRNRADRFSLLPKLLPQPTLPSLTHRNWANTKRSLKNQFRAIALRWRFQLQDIY 60
           ME+K+SQRNRADRFSLLPKLLPQPTLPS THR WA  KRS KNQF A+ALRWRFQLQDI 
Sbjct: 1   MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60

Query: 61  KDQLSTKHHFVHVVEG-----SESLTSISNQNGAPTHSIFIANRKIMDTDLEHKGQDIKI 120
           +DQ  TKHHFV +VEG      E+ TSI  QNG  THSI I NRKI DTDLEHKGQD KI
Sbjct: 61  RDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKI 120

Query: 121 QNPRAIRDRYQLQEKLQSSLNRLRKYKTLGILATPRLPPARTTSLIVLVPLIVFCARCII 180
           +NP AIRD YQLQEKLQSSLN L+ YK L +  +PRLPPARTTS IVLVPLIVFCARCII
Sbjct: 121 RNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCII 180

Query: 181 GASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSDSESSIDSTSPSEEEQ 240
           GASYARV  TS LKT +K EGE HKFRSGHWRSALRDIRELDG DSESS D +SPS +EQ
Sbjct: 181 GASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSSPSVDEQ 240

Query: 241 ISVEDLSHAYRKLDQDYEKFLSECGLSKWGYWRG 270
           ISVEDLSHAY+KLD+DYEKFLSECGLS  GYWRG
Sbjct: 241 ISVEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 274

BLAST of Lcy12g001380 vs. TAIR 10
Match: AT4G09970.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 62/233 (26.61%), Postives = 108/233 (46.35%), Query Frame = 0

Query: 44  QFRAIALRWRFQLQDIYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHS--IFIANRKI 103
           +F+  + R RF +Q + +++  TKH      + SESL  I  Q G    +      + ++
Sbjct: 28  RFKRASERCRFCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEESKTSSRL 87

Query: 104 MDTDLEHKGQDIKIQNPRAIRDRYQLQEKLQSSLNRLRKY-KTLGILAT------PRLPP 163
            D D E K  D    +      +    E+L   L R+ KY +T+G            LP 
Sbjct: 88  DDLDCEEK-HDAVTSSVIDDDSKMNTTEEL-PDLRRVEKYTETVGTADNLSGQNHQILPH 147

Query: 164 ARTTSLIV-LVPLIVFCARCIIGASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDI 223
             T  L+  L+P++ FC  CIIG  +  +         +++  + H   S  WR+AL D 
Sbjct: 148 LNTGVLLTSLLPVLGFCIICIIGTLHTII---------SRKTSQGHHHGSERWRTALMDW 207

Query: 224 RE---LDGSDSESSIDSTSPSEEEQISVEDLSHAYRKLDQDYEKFLSECGLSK 264
            E    DG DS S     + + +E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 208 NEPLASDGHDSMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGVGE 249

BLAST of Lcy12g001380 vs. TAIR 10
Match: AT4G09970.2 (unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-08
Identity = 61/223 (27.35%), Postives = 102/223 (45.74%), Query Frame = 0

Query: 51  RWRFQLQDIYKDQLSTKHHFVHVVEGSESLTSISNQNGAPTHS--IFIANRKIMDTDLEH 110
           +W F +Q + +++  TKH      + SESL  I  Q G    +      + ++ D D E 
Sbjct: 4   KW-FCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEESKTSSRLDDLDCEE 63

Query: 111 KGQDIKIQNPRAIRDRYQLQEKLQSSLNRLRKY-KTLGILAT------PRLPPARTTSLI 170
           K  D    +      +    E+L   L R+ KY +T+G            LP   T  L+
Sbjct: 64  K-HDAVTSSVIDDDSKMNTTEEL-PDLRRVEKYTETVGTADNLSGQNHQILPHLNTGVLL 123

Query: 171 V-LVPLIVFCARCIIGASYARVFGTSGLKTANKREGERHKFRSGHWRSALRDIRELDGSD 230
             L+P++ FC  CIIG  +  +         +++  + H   S  WR+AL D  E   SD
Sbjct: 124 TSLLPVLGFCIICIIGTLHTII---------SRKTSQGHHHGSERWRTALMDWNEPLASD 183

Query: 231 SESSIDSTSPSEEEQISVEDLSHAYRKLDQDYEKFLSECGLSK 264
                DS SP   E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 184 GH---DSMSPEYREATATDEMNEAYSRVELEYKRFLLECGVGE 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T6Z46.8e-11176.24LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3CBV56.8e-11175.89uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1CKQ61.3e-10978.68uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CK586.3e-10977.74uncharacterized protein LOC111012032 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A1S3CB501.1e-10873.79uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
XP_038890844.17.1e-12383.09uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida][more]
KAA0039254.11.4e-11076.24uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00... [more]
XP_008459633.11.4e-11075.89PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo][more]
XP_022141747.12.6e-10978.68uncharacterized protein LOC111012032 isoform X3 [Momordica charantia][more]
XP_022141746.11.3e-10877.74uncharacterized protein LOC111012032 isoform X2 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT4G09970.15.6e-0926.61unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXP... [more]
AT4G09970.22.8e-0827.35unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 238..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..237
IPR018392LysM domainPROSITEPS51782LYSMcoord: 70..115
score: 9.447505

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g001380.1Lcy12g001380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane