Lcy12g000610 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACATTGGATAACAGATCGATTCCAAGTAGAGGACGCGTTTACATCTTATTTTGAGAAATTATTTCAGTCTGACGATCCGTTATCAGAGGTCATGGACAATGCTCTTCAGGATATTCAGGAAAAGGTCACCTCAGATATGAACGCTAAGCTGTTGGCTCCTTTCTCACGTGCTGAAATTGAATTAGCAATCAAACAGATGCATTCGTCTAAGGCTCCAGGTCCAGATGGTTTTCCAGCGCTATTTTATCAGAAATTCTGGTCAGAGGTTGGTGATACCACGGTTCTAAATTGTTTGGAAATTCTTAATCAAGCTCGTTTTGTGGCGGACTGGAATTACACCTATATTGCACTCATTCCCAAGTCAACTTCTCCCAAAAAAGTTTCTGGTTACCGGCCCATTAGTCTGTGTAATGTGGTTTATAAAATCATTGCAAAGGTGATCGTTAATCGAATGAAAGGAGTTTTTCGAGCAATAATCTCTGAAAACCGTTCCTGGGTAGTCCATCTTTGA ATGGGACATTGGATAACAGATCGATTCCAAGTAGAGGACGCGTTTACATCTTATTTTGAGAAATTATTTCAGTCTGACGATCCGTTATCAGAGGTCATGGACAATGCTCTTCAGGATATTCAGGAAAAGGTCACCTCAGATATGAACGCTAAGCTGTTGGCTCCTTTCTCACGTGCTGAAATTGAATTAGCAATCAAACAGATGCATTCGTCTAAGGCTCCAGGTCCAGATGGTTTTCCAGCGCTATTTTATCAGAAATTCTGGTCAGAGGTTGGTGATACCACGGTTCTAAATTGTTTGGAAATTCTTAATCAAGCTCGTTTTGTGGCGGACTGGAATTACACCTATATTGCACTCATTCCCAAGTCAACTTCTCCCAAAAAAGTTTCTGGTTACCGGCCCATTAGTCTGTGTAATGTGGTTTATAAAATCATTGCAAAGGTGATCGTTAATCGAATGAAAGGAGTTTTTCGAGCAATAATCTCTGAAAACCGTTCCTGGGTAGTCCATCTTTGA ATGGGACATTGGATAACAGATCGATTCCAAGTAGAGGACGCGTTTACATCTTATTTTGAGAAATTATTTCAGTCTGACGATCCGTTATCAGAGGTCATGGACAATGCTCTTCAGGATATTCAGGAAAAGGTCACCTCAGATATGAACGCTAAGCTGTTGGCTCCTTTCTCACGTGCTGAAATTGAATTAGCAATCAAACAGATGCATTCGTCTAAGGCTCCAGGTCCAGATGGTTTTCCAGCGCTATTTTATCAGAAATTCTGGTCAGAGGTTGGTGATACCACGGTTCTAAATTGTTTGGAAATTCTTAATCAAGCTCGTTTTGTGGCGGACTGGAATTACACCTATATTGCACTCATTCCCAAGTCAACTTCTCCCAAAAAAGTTTCTGGTTACCGGCCCATTAGTCTGTGTAATGTGGTTTATAAAATCATTGCAAAGGTGATCGTTAATCGAATGAAAGGAGTTTTTCGAGCAATAATCTCTGAAAACCGTTCCTGGGTAGTCCATCTTTGA MGHWITDRFQVEDAFTSYFEKLFQSDDPLSEVMDNALQDIQEKVTSDMNAKLLAPFSRAEIELAIKQMHSSKAPGPDGFPALFYQKFWSEVGDTTVLNCLEILNQARFVADWNYTYIALIPKSTSPKKVSGYRPISLCNVVYKIIAKVIVNRMKGVFRAIISENRSWVVHL Homology
BLAST of Lcy12g000610 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 79.3 bits (194), Expect = 4.6e-14 Identity = 54/164 (32.93%), Postives = 86/164 (52.44%), Query Frame = 0
BLAST of Lcy12g000610 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13 Identity = 47/165 (28.48%), Postives = 78/165 (47.27%), Query Frame = 0
BLAST of Lcy12g000610 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.3e-12 Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 0
BLAST of Lcy12g000610 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 8.9e-10 Identity = 45/166 (27.11%), Postives = 77/166 (46.39%), Query Frame = 0
BLAST of Lcy12g000610 vs. ExPASy TrEMBL
Match: A0A6P9EBC5 (uncharacterized protein LOC118348020 OS=Juglans regia OX=51240 GN=LOC118348020 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38 Identity = 84/165 (50.91%), Postives = 110/165 (66.67%), Query Frame = 0
BLAST of Lcy12g000610 vs. ExPASy TrEMBL
Match: A0A2I4ETF9 (uncharacterized protein LOC108992555 OS=Juglans regia OX=51240 GN=LOC108992555 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 8.9e-37 Identity = 81/157 (51.59%), Postives = 108/157 (68.79%), Query Frame = 0
BLAST of Lcy12g000610 vs. ExPASy TrEMBL
Match: A0A6P9F758 (uncharacterized protein LOC118349891 OS=Juglans regia OX=51240 GN=LOC118349891 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 2.0e-36 Identity = 81/165 (49.09%), Postives = 108/165 (65.45%), Query Frame = 0
BLAST of Lcy12g000610 vs. ExPASy TrEMBL
Match: A0A2N9IBV7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49442 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 5.8e-36 Identity = 75/163 (46.01%), Postives = 112/163 (68.71%), Query Frame = 0
BLAST of Lcy12g000610 vs. ExPASy TrEMBL
Match: A0A2N9HKS5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40714 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 5.8e-36 Identity = 75/163 (46.01%), Postives = 112/163 (68.71%), Query Frame = 0
BLAST of Lcy12g000610 vs. NCBI nr
Match: XP_035544636.1 (uncharacterized protein LOC118348020 [Juglans regia]) HSP 1 Score: 169.1 bits (427), Expect = 3.3e-38 Identity = 84/165 (50.91%), Postives = 110/165 (66.67%), Query Frame = 0
BLAST of Lcy12g000610 vs. NCBI nr
Match: XP_018822692.1 (uncharacterized protein LOC108992555 [Juglans regia] >KAF5466911.1 hypothetical protein F2P56_016793 [Juglans regia]) HSP 1 Score: 163.3 bits (412), Expect = 1.8e-36 Identity = 81/157 (51.59%), Postives = 108/157 (68.79%), Query Frame = 0
BLAST of Lcy12g000610 vs. NCBI nr
Match: XP_035551723.1 (uncharacterized protein LOC118349891 [Juglans regia]) HSP 1 Score: 162.2 bits (409), Expect = 4.1e-36 Identity = 81/165 (49.09%), Postives = 108/165 (65.45%), Query Frame = 0
BLAST of Lcy12g000610 vs. NCBI nr
Match: XP_006487889.1 (uncharacterized protein LOC102617714 [Citrus sinensis]) HSP 1 Score: 161.4 bits (407), Expect = 7.0e-36 Identity = 81/165 (49.09%), Postives = 104/165 (63.03%), Query Frame = 0
BLAST of Lcy12g000610 vs. NCBI nr
Match: XP_030936391.1 (uncharacterized protein LOC115961572 [Quercus lobata]) HSP 1 Score: 159.5 bits (402), Expect = 2.6e-35 Identity = 79/169 (46.75%), Postives = 104/169 (61.54%), Query Frame = 0
BLAST of Lcy12g000610 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.9e-15 Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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