Lcy12g000550 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g000550
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BED-type domain-containing protein
Location	Chr12: 637779 .. 638174 (+)
RNA-Seq Expression	Lcy12g000550
Synteny	Lcy12g000550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAGGATATATACAAGATCCCAAATATTCGCAAAACACTGAAACAGACCATGGAGATCAGTAATTTCATTTATGTTCGTCTTGGATTGTTGAATATGATGAGAAGGTTTACTGATCAAAAGGAGTTGGTTAGACCAGCTAAGACTCGCTTTGCTACAGCTTGCATCACATTATCAAGTATACATCGTCAAAAGAACAACTTGACAAAGATGTTTACTTCAGATGAATGGAAGAATAGCAAATGGAGAAAGGAGCAACAAGGCAAGCGAGTTGTTCAAACTATTTTGTTGGCCACATTTTGGAATACAATTGTGTTTGCTCTTAAAGTCTTAGGCCCTCTCGTGCGAGTTCTAAGGTTGGTGGATGGTGAGAAGAAGCTGTTAGGTATCTAA

mRNA sequence

ATGTTGGAGGATATATACAAGATCCCAAATATTCGCAAAACACTGAAACAGACCATGGAGATCAGTAATTTCATTTATGTTCGTCTTGGATTGTTGAATATGATGAGAAGGTTTACTGATCAAAAGGAGTTGGTTAGACCAGCTAAGACTCGCTTTGCTACAGCTTGCATCACATTATCAAGTATACATCGTCAAAAGAACAACTTGACAAAGATGTTTACTTCAGATGAATGGAAGAATAGCAAATGGAGAAAGGAGCAACAAGGCAAGCGAGTTGTTCAAACTATTTTGTTGGCCACATTTTGGAATACAATTGTGTTTGCTCTTAAAGTCTTAGGCCCTCTCGTGCGAGTTCTAAGGTTGGTGGATGGTGAGAAGAAGCTGTTAGGTATCTAA

Coding sequence (CDS)

ATGTTGGAGGATATATACAAGATCCCAAATATTCGCAAAACACTGAAACAGACCATGGAGATCAGTAATTTCATTTATGTTCGTCTTGGATTGTTGAATATGATGAGAAGGTTTACTGATCAAAAGGAGTTGGTTAGACCAGCTAAGACTCGCTTTGCTACAGCTTGCATCACATTATCAAGTATACATCGTCAAAAGAACAACTTGACAAAGATGTTTACTTCAGATGAATGGAAGAATAGCAAATGGAGAAAGGAGCAACAAGGCAAGCGAGTTGTTCAAACTATTTTGTTGGCCACATTTTGGAATACAATTGTGTTTGCTCTTAAAGTCTTAGGCCCTCTCGTGCGAGTTCTAAGGTTGGTGGATGGTGAGAAGAAGCTGTTAGGTATCTAA

Protein sequence

MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLSSIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLRLVDGEKKLLGI

Homology

[Close]

BLAST of Lcy12g000550 vs. ExPASy TrEMBL
Match: A0A5A7TY62 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001320 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ MEISNFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 332 MLEDIYKISNIRKALKRGMEISNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 391

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIH QKNNL KMFTSDEWK+SKW KEQQG+RVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 392 SIHHQKNNLRKMFTSDEWKDSKWSKEQQGRRVVQTILLASFWTTIVFALKVSGPLVRVLR 451

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 452 LVDGEKK 458

[Close]

BLAST of Lcy12g000550 vs. ExPASy TrEMBL
Match: A0A5D3DXN3 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001270 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ MEISNFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 332 MLEDIYKISNIRKALKRGMEISNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 391

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIH QKNNL KMFTSDEWK+SKW KEQQG+RVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 392 SIHHQKNNLRKMFTSDEWKDSKWSKEQQGRRVVQTILLASFWTTIVFALKVSGPLVRVLR 451

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 452 LVDGEKK 458

[Close]

BLAST of Lcy12g000550 vs. ExPASy TrEMBL
Match: A0A5A7U370 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00840 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ MEISNFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 291 MLEDIYKISNIRKALKRGMEISNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 350

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIH QKNNL KMFTSDEWK+SKW KEQQG+RVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 351 SIHHQKNNLRKMFTSDEWKDSKWSKEQQGRRVVQTILLASFWTTIVFALKVSGPLVRVLR 410

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 411 LVDGEKK 417

[Close]

BLAST of Lcy12g000550 vs. ExPASy TrEMBL
Match: A0A5A7VJR4 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00160 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ MEISNFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 332 MLEDIYKISNIRKALKRGMEISNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 391

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIH QKNNL KMFTSDEWK+SKW KEQQG+RVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 392 SIHHQKNNLRKMFTSDEWKDSKWSKEQQGRRVVQTILLASFWTTIVFALKVSGPLVRVLR 451

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 452 LVDGEKK 458

[Close]

BLAST of Lcy12g000550 vs. ExPASy TrEMBL
Match: A0A5D3DR78 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00050 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ MEISNFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 332 MLEDIYKISNIRKALKRGMEISNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 391

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIH QKNNL KMFTSDEWK+SKW KEQQG+RVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 392 SIHHQKNNLRKMFTSDEWKDSKWSKEQQGRRVVQTILLASFWTTIVFALKVSGPLVRVLR 451

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 452 LVDGEKK 458

[Close]

BLAST of Lcy12g000550 vs. NCBI nr
Match: XP_031745317.1 (uncharacterized protein LOC116405444 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 3.3e-54
Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ +EISNFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 331 MLEDIYKISNIRKALKRGIEISNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 390

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIHRQKNNL KMFTSDEWK+SKW KEQQGKRVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 391 SIHRQKNNLRKMFTSDEWKDSKWSKEQQGKRVVQTILLASFWTTIVFALKVSGPLVRVLR 450

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 451 LVDGEKK 457

[Close]

BLAST of Lcy12g000550 vs. NCBI nr
Match: XP_031736734.1 (uncharacterized protein LOC116402076 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 3.3e-54
Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ +EISNFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 331 MLEDIYKISNIRKALKRGIEISNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 390

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIHRQKNNL KMFTSDEWK+SKW KEQQGKRVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 391 SIHRQKNNLRKMFTSDEWKDSKWSKEQQGKRVVQTILLASFWTTIVFALKVSGPLVRVLR 450

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 451 LVDGEKK 457

[Close]

BLAST of Lcy12g000550 vs. NCBI nr
Match: XP_031741477.1 (uncharacterized protein LOC105435633 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 3.3e-54
Identity = 114/127 (89.76%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ +EISNFIYV  GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 331 MLEDIYKISNIRKALKRGIEISNFIYVHPGLLNMMRRFTNQKELVRPAKTRFATACITLS 390

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIHRQKNNL KMFTSDEWKNSKW KEQQGKRVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 391 SIHRQKNNLRKMFTSDEWKNSKWSKEQQGKRVVQTILLASFWTTIVFALKVSGPLVRVLR 450

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 451 LVDGEKK 457

[Close]

BLAST of Lcy12g000550 vs. NCBI nr
Match: XP_031737060.1 (uncharacterized protein LOC101204843 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 4.3e-54
Identity = 114/127 (89.76%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ +EISNFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 176 MLEDIYKISNIRKALKRGIEISNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 235

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIHRQKNNL KMFTSDEWK SKW KEQQGKRVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 236 SIHRQKNNLRKMFTSDEWKESKWSKEQQGKRVVQTILLASFWTTIVFALKVSGPLVRVLR 295

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 296 LVDGEKK 302

[Close]

BLAST of Lcy12g000550 vs. NCBI nr
Match: XP_031736957.1 (uncharacterized protein LOC116402111 isoform X1 [Cucumis sativus] >XP_031736958.1 uncharacterized protein LOC116402111 isoform X2 [Cucumis sativus] >XP_031736959.1 uncharacterized protein LOC116402111 isoform X2 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 7.4e-54
Identity = 113/127 (88.98%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLEDIYKI NIRK LK+ +EI+NFIYVR GLLNMMRRFT+QKELVRPAKTRFATACITLS
Sbjct: 208 MLEDIYKISNIRKALKRGIEINNFIYVRPGLLNMMRRFTNQKELVRPAKTRFATACITLS 267

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
           SIHRQKNNL KMFTSDEWK+SKW KEQQGKRVVQTILLA+FW TIVFALKV GPLVRVLR
Sbjct: 268 SIHRQKNNLRKMFTSDEWKDSKWSKEQQGKRVVQTILLASFWTTIVFALKVSGPLVRVLR 327

Query: 121 LVDGEKK 128
           LVDGEKK
Sbjct: 328 LVDGEKK 334

[Close]

BLAST of Lcy12g000550 vs. TAIR 10
Match: AT5G33406.1 (hAT dimerisation domain-containing protein / transposase-related )

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21
Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 34  MMRRFTDQKELVRPAKTRFATACITLSSIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVV 93
           MMR+FT  + L RPA TR AT+ ITL+  HR K+NL KM  SDEW  SKW KE  G ++ 
Sbjct: 1   MMRKFTGGRNLHRPAITRIATSFITLAQFHRLKDNLRKMVHSDEWNASKWTKEAGGMKIK 60

Query: 94  QTILLATFWNTIVFALKVLGPLVRVLRLVDGEKK 128
                 +FW  ++ ALK+ GPL++VLR+VDGE+K
Sbjct: 61  SFFFQESFWKNVLHALKLGGPLIQVLRMVDGERK 94

[Close]

BLAST of Lcy12g000550 vs. TAIR 10
Match: AT3G22220.1 (hAT transposon superfamily )

HSP 1 Score: 80.9 bits (198), Expect = 8.5e-16
Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLE+  K+  IR+ ++Q   ++  IY   G+LN+MR+FT   ++V+P  T  AT   T+ 
Sbjct: 361 MLEEFGKMDWIREIIEQARTVTRIIYNHSGVLNLMRKFTFGNDIVQPVCTSSATNFTTMG 420

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
            I   K  L  M TS EW +  + KE  G  + +TI    FW  +  A  +  P++RVLR
Sbjct: 421 RIADLKPYLQAMVTSSEWNDCSYSKEAGGLAMTETINDEDFWKALTLANHITAPILRVLR 480

Query: 121 LVDGEKK 128
           +V  E+K
Sbjct: 481 IVCSERK 487

[Close]

BLAST of Lcy12g000550 vs. TAIR 10
Match: AT3G22220.2 (hAT transposon superfamily )

HSP 1 Score: 80.9 bits (198), Expect = 8.5e-16
Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLE+  K+  IR+ ++Q   ++  IY   G+LN+MR+FT   ++V+P  T  AT   T+ 
Sbjct: 361 MLEEFGKMDWIREIIEQARTVTRIIYNHSGVLNLMRKFTFGNDIVQPVCTSSATNFTTMG 420

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
            I   K  L  M TS EW +  + KE  G  + +TI    FW  +  A  +  P++RVLR
Sbjct: 421 RIADLKPYLQAMVTSSEWNDCSYSKEAGGLAMTETINDEDFWKALTLANHITAPILRVLR 480

Query: 121 LVDGEKK 128
           +V  E+K
Sbjct: 481 IVCSERK 487

[Close]

BLAST of Lcy12g000550 vs. TAIR 10
Match: AT4G15020.1 (hAT transposon superfamily )

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-14
Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLE+  K+  I +T++Q   I+ F+Y   G+LN+M +FT   +++ PA +  AT   TL 
Sbjct: 365 MLEEFGKLGWISETIEQAQAITRFVYNHSGVLNLMWKFTSGNDILLPAFSSSATNFATLG 424

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
            I   K+NL  M TS EW    + +E  G  V+  +    FW  +     +  PL+R LR
Sbjct: 425 RIAELKSNLQAMVTSAEWNECSYSEEPSG-LVMNALTDEAFWKAVALVNHLTSPLLRALR 484

Query: 121 LVDGEKK 128
           +V  EK+
Sbjct: 485 IVCSEKR 490

[Close]

BLAST of Lcy12g000550 vs. TAIR 10
Match: AT4G15020.2 (hAT transposon superfamily )

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-14
Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MLEDIYKIPNIRKTLKQTMEISNFIYVRLGLLNMMRRFTDQKELVRPAKTRFATACITLS 60
           MLE+  K+  I +T++Q   I+ F+Y   G+LN+M +FT   +++ PA +  AT   TL 
Sbjct: 365 MLEEFGKLGWISETIEQAQAITRFVYNHSGVLNLMWKFTSGNDILLPAFSSSATNFATLG 424

Query: 61  SIHRQKNNLTKMFTSDEWKNSKWRKEQQGKRVVQTILLATFWNTIVFALKVLGPLVRVLR 120
            I   K+NL  M TS EW    + +E  G  V+  +    FW  +     +  PL+R LR
Sbjct: 425 RIAELKSNLQAMVTSAEWNECSYSEEPSG-LVMNALTDEAFWKAVALVNHLTSPLLRALR 484

Query: 121 LVDGEKK 128
           +V  EK+
Sbjct: 485 IVCSEKR 490

The following BLAST results are available for this feature:

BLAST of Lcy12g000550 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g000550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TY62	4.7e-54	88.98	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3DXN3	4.7e-54	88.98	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7U370	4.7e-54	88.98	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VJR4	4.7e-54	88.98	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3DR78	4.7e-54	88.98	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Lcy12g000550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745317.1	3.3e-54	89.76	uncharacterized protein LOC116405444 [Cucumis sativus]	[more]
XP_031736734.1	3.3e-54	89.76	uncharacterized protein LOC116402076 [Cucumis sativus]	[more]
XP_031741477.1	3.3e-54	89.76	uncharacterized protein LOC105435633 [Cucumis sativus]	[more]
XP_031737060.1	4.3e-54	89.76	uncharacterized protein LOC101204843 [Cucumis sativus]	[more]
XP_031736957.1	7.4e-54	88.98	uncharacterized protein LOC116402111 isoform X1 [Cucumis sativus] >XP_031736958....	[more]

BLAST of Lcy12g000550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G33406.1	2.3e-21	52.13	hAT dimerisation domain-containing protein / transposase-related	[more]
AT3G22220.1	8.5e-16	36.22	hAT transposon superfamily	[more]
AT3G22220.2	8.5e-16	36.22	hAT transposon superfamily	[more]
AT4G15020.1	3.6e-14	34.65	hAT transposon superfamily	[more]
AT4G15020.2	3.6e-14	34.65	hAT transposon superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32166	OSJNBA0013A04.12 PROTEIN	coord: 2..124
None	No IPR available	PANTHER	PTHR32166:SF75	HAT TRANSPOSON SUPERFAMILY PROTEIN	coord: 2..124
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g000550.1	Lcy12g000550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity