Lcy12g000540 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g000540
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BED-type domain-containing protein
Location	Chr12: 636797 .. 637651 (+)
RNA-Seq Expression	Lcy12g000540
Synteny	Lcy12g000540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAACACCTTGTTGGTGGTCATAGAAATGCTACTCCATGTAGAAAATGTCCGGATCATGTCAAGGAAGAAATTAAAGCGTATATGTTGGAGAAGGAGATCAAAGATCAAAGAAATTTGATTCCGAATATTGATGCTGAAAATTATGGTATTGAGGATGACGATGAAGATGATGTGGTAGTAAGCAATTCAGGTAAGAGAGGAATGTCAAGTTCAAGCTCTCAAACAGTAAGTTGGGAGTCAATTAAGTCTTCTTTTAAGAAGCCAAAACAAAAGGGTCCTATAGATGCATATTTTACTCCTAATCCACAGATTGTTGTTCAAAATGGAAAGAGTGAGAAAGGAAAGCAAACAACATTGAATGAAGCCAAAAAGGAGATGAGGGAGCACACCATACAAAGAATTGCTCGATGGTTTTATGATGCTGGAATGCCTCTAAATGCTTGCAATTATGAAAGCTTTGCACCCATGATTGAAGCAATAGGACAATTTAGTCCTGGATTGAAACCACCAACTTATCATGAATTGAGAGTGTCGTGTTTAAGAAAAGAGTTAGCAGCCACAAATGATTTGATGAGGGGTAATAAAGAAGAGTGGGTCAAGGTTGGATGCACTATTATGACCGACGGATGGACGGATAGAAGAAATAGGACATTACTCAACTTCTTAGTTAATAGTCCAAAAGACACCATGTTTATTGAGTCCATTGATGCCTCGTCTTATGTGAATGATGGGAAGAAAATGTTTGAATTGCTAGACAATTTTGTAGAGCGCATTGGAGAAGCCAATGTTGTACAAGTTGTTATTGATGTATCAGCAAATGTGATGGCAGGTAAGAATTTAAAATACTAG

mRNA sequence

ATGAAGCAACACCTTGTTGGTGGTCATAGAAATGCTACTCCATGTAGAAAATGTCCGGATCATGTCAAGGAAGAAATTAAAGCGTATATGTTGGAGAAGGAGATCAAAGATCAAAGAAATTTGATTCCGAATATTGATGCTGAAAATTATGGTATTGAGGATGACGATGAAGATGATGTGGTAGTAAGCAATTCAGGTAAGAGAGGAATGTCAAGTTCAAGCTCTCAAACAGTAAGTTGGGAGTCAATTAAGTCTTCTTTTAAGAAGCCAAAACAAAAGGGTCCTATAGATGCATATTTTACTCCTAATCCACAGATTGTTGTTCAAAATGGAAAGAGTGAGAAAGGAAAGCAAACAACATTGAATGAAGCCAAAAAGGAGATGAGGGAGCACACCATACAAAGAATTGCTCGATGGTTTTATGATGCTGGAATGCCTCTAAATGCTTGCAATTATGAAAGCTTTGCACCCATGATTGAAGCAATAGGACAATTTAGTCCTGGATTGAAACCACCAACTTATCATGAATTGAGAGTGTCGTGTTTAAGAAAAGAGTTAGCAGCCACAAATGATTTGATGAGGGGTAATAAAGAAGAGTGGGTCAAGGTTGGATGCACTATTATGACCGACGGATGGACGGATAGAAGAAATAGGACATTACTCAACTTCTTAGTTAATAGTCCAAAAGACACCATGTTTATTGAGTCCATTGATGCCTCGTCTTATGTGAATGATGGGAAGAAAATGTTTGAATTGCTAGACAATTTTGTAGAGCGCATTGGAGAAGCCAATGTTGTACAAGTTGTTATTGATGTATCAGCAAATGTGATGGCAGGTAAGAATTTAAAATACTAG

Coding sequence (CDS)

ATGAAGCAACACCTTGTTGGTGGTCATAGAAATGCTACTCCATGTAGAAAATGTCCGGATCATGTCAAGGAAGAAATTAAAGCGTATATGTTGGAGAAGGAGATCAAAGATCAAAGAAATTTGATTCCGAATATTGATGCTGAAAATTATGGTATTGAGGATGACGATGAAGATGATGTGGTAGTAAGCAATTCAGGTAAGAGAGGAATGTCAAGTTCAAGCTCTCAAACAGTAAGTTGGGAGTCAATTAAGTCTTCTTTTAAGAAGCCAAAACAAAAGGGTCCTATAGATGCATATTTTACTCCTAATCCACAGATTGTTGTTCAAAATGGAAAGAGTGAGAAAGGAAAGCAAACAACATTGAATGAAGCCAAAAAGGAGATGAGGGAGCACACCATACAAAGAATTGCTCGATGGTTTTATGATGCTGGAATGCCTCTAAATGCTTGCAATTATGAAAGCTTTGCACCCATGATTGAAGCAATAGGACAATTTAGTCCTGGATTGAAACCACCAACTTATCATGAATTGAGAGTGTCGTGTTTAAGAAAAGAGTTAGCAGCCACAAATGATTTGATGAGGGGTAATAAAGAAGAGTGGGTCAAGGTTGGATGCACTATTATGACCGACGGATGGACGGATAGAAGAAATAGGACATTACTCAACTTCTTAGTTAATAGTCCAAAAGACACCATGTTTATTGAGTCCATTGATGCCTCGTCTTATGTGAATGATGGGAAGAAAATGTTTGAATTGCTAGACAATTTTGTAGAGCGCATTGGAGAAGCCAATGTTGTACAAGTTGTTATTGATGTATCAGCAAATGTGATGGCAGGTAAGAATTTAAAATACTAG

Protein sequence

MKQHLVGGHRNATPCRKCPDHVKEEIKAYMLEKEIKDQRNLIPNIDAENYGIEDDDEDDVVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQTTLNEAKKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELRVSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESIDASSYVNDGKKMFELLDNFVERIGEANVVQVVIDVSANVMAGKNLKY

Homology

[Close]

BLAST of Lcy12g000540 vs. ExPASy TrEMBL
Match: A0A5A7TY62 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001320 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. ExPASy TrEMBL
Match: A0A5D3BV42 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6571G00020 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. ExPASy TrEMBL
Match: A0A5A7V8P5 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004030 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. ExPASy TrEMBL
Match: A0A5D3DR78 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00050 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. ExPASy TrEMBL
Match: A0A5A7TWK3 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001550 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. NCBI nr
Match: KAA0062061.1 (hypothetical protein E6C27_scaffold89G004030 [Cucumis melo var. makuwa])

HSP 1 Score: 412.1 bits (1058), Expect = 3.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. NCBI nr
Match: TYK26052.1 (hypothetical protein E5676_scaffold1185G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 412.1 bits (1058), Expect = 3.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. NCBI nr
Match: TYK03327.1 (hypothetical protein E5676_scaffold6571G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 412.1 bits (1058), Expect = 3.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. NCBI nr
Match: KAA0041802.1 (hypothetical protein E6C27_scaffold67G001750 [Cucumis melo var. makuwa] >KAA0048513.1 hypothetical protein E6C27_scaffold61G001320 [Cucumis melo var. makuwa])

HSP 1 Score: 412.1 bits (1058), Expect = 3.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. NCBI nr
Match: KAA0047882.1 (hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 412.1 bits (1058), Expect = 3.8e-111
Identity = 209/286 (73.08%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM-LEKEIKDQRNLIPNIDAENYGIEDDDEDD 60
           +KQHLVGG+RNA  C+KCPDHVKEEI+ YM  +KEIK+QRNLI +ID ++YG+ED+DE  
Sbjct: 42  LKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGS 101

Query: 61  VVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKSEKGKQT 120
           + V+N   R  SS            SS KKP+QKGP+DA+FTPNP+ VVQN K++KGKQT
Sbjct: 102 ISVNN---RATSSG-----------SSLKKPRQKGPMDAFFTPNPESVVQNRKNDKGKQT 161

Query: 121 TLNEA-KKEMREHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELR 180
           +LN A KKEMREHTIQRIARWFYDAG+PLNAC Y+SFAPMIE+IGQF PGLKPPTYHELR
Sbjct: 162 SLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIESIGQFGPGLKPPTYHELR 221

Query: 181 VSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESID 240
           V CL+KEL ATN+LM  +K EW KVGCT+M DGWTDRRNRTL+NFLVNSPK TMFIESID
Sbjct: 222 VPCLKKELEATNELMSSHKAEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIESID 281

Query: 241 ASSYVNDGKKMFELLDNFVERIGEANVVQVVID-VSANVMAGKNLK 284
           ASSYV DGKKMFELLDNFVERIGEANVVQVV D  SANVMAG+ L+
Sbjct: 282 ASSYVKDGKKMFELLDNFVERIGEANVVQVVTDSASANVMAGRLLE 313

[Close]

BLAST of Lcy12g000540 vs. TAIR 10
Match: AT1G43260.1 (hAT transposon superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-25
Identity = 56/158 (35.44%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 129 REHTI-QRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELRVSCLRKELA 188
           R H + Q +ARW Y  G+P NA   +    M+E  GQF PG+ PP+ ++LR   L++E+ 
Sbjct: 31  RLHVVHQYVARWVYSHGIPFNAIANDDLRRMLEVAGQFGPGVTPPSQYQLREPLLKEEVV 90

Query: 189 ATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESIDASSYVNDGK 248
               LM   ++EW   GC++ TD W+DR+ R+++N  +N  + TMF+ S D     + G+
Sbjct: 91  RMKGLMEEQEDEWRVNGCSVTTDSWSDRKRRSIMNLCINCKEGTMFLSSKDCFDDSHTGE 150

Query: 249 KMFELLDNF-VERIGEANVVQVVI-DVSANVMAGKNLK 284
            +F  ++ + ++ +G  +VVQVV  + + N+ A K LK
Sbjct: 151 YIFAYVNEYCIKNLGGDHVVQVVTNNATNNITAAKLLK 188

[Close]

BLAST of Lcy12g000540 vs. TAIR 10
Match: AT3G17450.1 (hAT dimerisation domain-containing protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-22
Identity = 77/282 (27.30%), Postives = 127/282 (45.04%), Query Frame = 0


Query: 2   KQHLVGGHRNATPCRKCPDHVKEEIKAYMLEKEIKDQRN--------LIPNIDAENYGIE 61
           KQHL        PC+  P+ V  +IK  M       ++N        L     +++   E
Sbjct: 166 KQHLARIPGEVAPCKTAPEEVYVKIKENMKWHRAGKRQNRPDDEMGALTFRTVSQDPDQE 225

Query: 62  DDDEDDVVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPIDAYFTPNPQIVVQNGKS 121
           +D ED      S  R M  +   +   +  + SF     +   +A       I  Q+  S
Sbjct: 226 EDREDHDFYPTSQDRLMLGNGRFS---KDKRKSFDSTNMRSVSEAKTKRARMIPFQSPSS 285

Query: 122 EKGKQTTLNEAKKEM-REHTIQRIARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPP 181
            K ++   + + + + R+     I+++ +  G+P  A N   F  MIE IG +  G   P
Sbjct: 286 SKQRKLYSSCSNRVVSRKDVTSSISKFLHHVGVPTEAANSLYFQKMIELIGMYGEGFVVP 345

Query: 182 TYHELRVSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTM 241
           +        L++E++     +R  +  WV  GC+IM D WT+   + +++FLV+ P+   
Sbjct: 346 SSQLFSGRLLQEEMSTIKSYLREYRSSWVVTGCSIMADTWTNTEGKKMISFLVSCPRGVY 405

Query: 242 FIESIDASSYVNDGKKMFELLDNFVERIGEANVVQVVIDVSA 275
           F  SIDA+  V D   +F+ LD  V+ IGE NVVQV+   +A
Sbjct: 406 FHSSIDATDIVEDALSLFKCLDKLVDDIGEENVVQVITQNTA 444

[Close]

BLAST of Lcy12g000540 vs. TAIR 10
Match: AT4G15020.1 (hAT transposon superfamily )

HSP 1 Score: 95.5 bits (236), Expect = 7.3e-20
Identity = 82/307 (26.71%), Postives = 137/307 (44.63%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM---LEKEIKDQRN------------LIPNI 60
           +K+HL G     T C    D V E+++ ++   ++  ++ QR              +P I
Sbjct: 50  VKEHLAGKKGQGTIC----DQVPEDVRLFLQQCIDGTVRRQRKRHKSSSEPLSVASLPPI 109

Query: 61  DAE--------NYGIEDDDEDDVVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPID 120
           + +        N G +     DVVV N     + S  ++  ++ S K++F+       +D
Sbjct: 110 EGDMMVVQPDVNDGFKSPGSSDVVVQN---ESLLSGRTKQRTYRSKKNAFENGSASNNVD 169

Query: 121 AYFTPNPQIVVQNGKSEKGKQTTLNEAKKEMREHTI-QRIARWFYDAGMPLNACNYESFA 180
                   ++     S K     +       RE+TI   I R+ +  G   +A N  +F 
Sbjct: 170 LIGRDMDNLIPVAISSVK----NIVHPSFRDRENTIHMAIGRFLFGIGADFDAVNSVNFQ 229

Query: 181 PMIEAIGQFSPGLKPPTYHELRVSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRR 240
           PMI+AI     G+  PT+ +LR   L+  +      +   K  W + GC+I+ +     +
Sbjct: 230 PMIDAIASGGFGVSAPTHDDLRGWILKNCVEEMAKEIDECKAMWKRTGCSILVEELNSDK 289

Query: 241 NRTLLNFLVNSPKDTMFIESIDASSYVNDGKKMFELLDNFVERIGEANVVQVVIDV-SAN 283
              +LNFLV  P+  +F++S+DAS  ++   K+FELL   VE +G  NVVQV+       
Sbjct: 290 GFKVLNFLVYCPEKVVFLKSVDASEVLSSADKLFELLSELVEEVGSTNVVQVITKCDDYY 345

[Close]

BLAST of Lcy12g000540 vs. TAIR 10
Match: AT4G15020.2 (hAT transposon superfamily )

HSP 1 Score: 95.5 bits (236), Expect = 7.3e-20
Identity = 82/307 (26.71%), Postives = 137/307 (44.63%), Query Frame = 0


Query: 1   MKQHLVGGHRNATPCRKCPDHVKEEIKAYM---LEKEIKDQRN------------LIPNI 60
           +K+HL G     T C    D V E+++ ++   ++  ++ QR              +P I
Sbjct: 50  VKEHLAGKKGQGTIC----DQVPEDVRLFLQQCIDGTVRRQRKRHKSSSEPLSVASLPPI 109

Query: 61  DAE--------NYGIEDDDEDDVVVSNSGKRGMSSSSSQTVSWESIKSSFKKPKQKGPID 120
           + +        N G +     DVVV N     + S  ++  ++ S K++F+       +D
Sbjct: 110 EGDMMVVQPDVNDGFKSPGSSDVVVQN---ESLLSGRTKQRTYRSKKNAFENGSASNNVD 169

Query: 121 AYFTPNPQIVVQNGKSEKGKQTTLNEAKKEMREHTI-QRIARWFYDAGMPLNACNYESFA 180
                   ++     S K     +       RE+TI   I R+ +  G   +A N  +F 
Sbjct: 170 LIGRDMDNLIPVAISSVK----NIVHPSFRDRENTIHMAIGRFLFGIGADFDAVNSVNFQ 229

Query: 181 PMIEAIGQFSPGLKPPTYHELRVSCLRKELAATNDLMRGNKEEWVKVGCTIMTDGWTDRR 240
           PMI+AI     G+  PT+ +LR   L+  +      +   K  W + GC+I+ +     +
Sbjct: 230 PMIDAIASGGFGVSAPTHDDLRGWILKNCVEEMAKEIDECKAMWKRTGCSILVEELNSDK 289

Query: 241 NRTLLNFLVNSPKDTMFIESIDASSYVNDGKKMFELLDNFVERIGEANVVQVVIDV-SAN 283
              +LNFLV  P+  +F++S+DAS  ++   K+FELL   VE +G  NVVQV+       
Sbjct: 290 GFKVLNFLVYCPEKVVFLKSVDASEVLSSADKLFELLSELVEEVGSTNVVQVITKCDDYY 345

[Close]

BLAST of Lcy12g000540 vs. TAIR 10
Match: AT1G79740.1 (hAT transposon superfamily )

HSP 1 Score: 92.4 bits (228), Expect = 6.1e-19
Identity = 41/138 (29.71%), Postives = 82/138 (59.42%), Query Frame = 0


Query: 136 IARWFYDAGMPLNACNYESFAPMIEAIGQFSPGLKPPTYHELRVSCLRKELAATNDLMRG 195
           I+ +F++  +        S+  M++A+ +  PG   P+     +  ++ +++     ++ 
Sbjct: 112 ISLFFFENKIDFAVARSPSYHHMLDAVAKCGPGFVAPSPKTEWLDRVKSDISLQ---LKD 171

Query: 196 NKEEWVKVGCTIMTDGWTDRRNRTLLNFLVNSPKDTMFIESIDASSYVNDGKKMFELLDN 255
            ++EWV  GCTI+ + WTD ++R L+NF V+SP    F +S+DASSY  + K + +L D+
Sbjct: 172 TEKEWVTTGCTIIAEAWTDNKSRALINFSVSSPSRIFFHKSVDASSYFKNSKCLADLFDS 231

Query: 256 FVERIGEANVVQVVIDVS 274
            ++ IG+ ++VQ+++D S
Sbjct: 232 VIQDIGQEHIVQIIMDNS 246

The following BLAST results are available for this feature:

BLAST of Lcy12g000540 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g000540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TY62	1.8e-111	73.08	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3BV42	1.8e-111	73.08	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7V8P5	1.8e-111	73.08	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3DR78	1.8e-111	73.08	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7TWK3	1.8e-111	73.08	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of Lcy12g000540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062061.1	3.8e-111	73.08	hypothetical protein E6C27_scaffold89G004030 [Cucumis melo var. makuwa]	[more]
TYK26052.1	3.8e-111	73.08	hypothetical protein E5676_scaffold1185G00050 [Cucumis melo var. makuwa]	[more]
TYK03327.1	3.8e-111	73.08	hypothetical protein E5676_scaffold6571G00020 [Cucumis melo var. makuwa]	[more]
KAA0041802.1	3.8e-111	73.08	hypothetical protein E6C27_scaffold67G001750 [Cucumis melo var. makuwa] >KAA0048...	[more]
KAA0047882.1	3.8e-111	73.08	hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy12g000540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43260.1	2.6e-25	35.44	hAT transposon superfamily protein	[more]
AT3G17450.1	1.2e-22	27.30	hAT dimerisation domain-containing protein	[more]
AT4G15020.1	7.3e-20	26.71	hAT transposon superfamily	[more]
AT4G15020.2	7.3e-20	26.71	hAT transposon superfamily	[more]
AT1G79740.1	6.1e-19	29.71	hAT transposon superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007021	Domain of unknown function DUF659	PFAM	PF04937	DUF659	coord: 172..282 e-value: 7.2E-33 score: 113.6
None	No IPR available	PANTHER	PTHR32166:SF33	HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN	coord: 2..282
None	No IPR available	PANTHER	PTHR32166	OSJNBA0013A04.12 PROTEIN	coord: 2..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g000540.1	Lcy12g000540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity