Lcy12g000370 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g000370
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Retrotransposon protein
Location	Chr12: 443034 .. 444675 (+)
RNA-Seq Expression	Lcy12g000370
Synteny	Lcy12g000370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCAGTACACAAGTCATATGGAACATGTGCAGAAGCGGAGTATGCATTTAGGCGTTTCGTAATGGGGACCAGTGGTCGAGCTAACCTCATGGATGAACATGCAGCGTGTCGTACCCGACCCATAAGGGCAAATGGTCGAAATGTGGGAAAATGTTATAGTCTGAGTAGGATGTTCGTAGGGTTTGTTATTGGAATTATTGTAATGTACATCGTCCTATACTATCTTTAGTACATTAGGGTATACCCATGTAATCATGGGTGATTTTGTAATAGTAAATAAATGATGGTTTATATGTCGTCCAGGAACAAGTGCATTGCAAATGGATTCTGTAACACCACACGAGCTTGTTTCCATACTTCCATAATGGTTGACTCCCAACGTCAATTATTCAACCTGATTAACTTCTTCATGACCGACCGTCTTAGGATAGAAAACCAAACTCCCTACATCAAACATCAGAACAGACAATTAGCCTGCTTTCGGTTGACCCATGAAAGTGACCTATGTTGTCGAGAGAGCACGAGGATGGATAGGAGATGTTTCGCCATCCTATGCAGTATGCTTAGGACGACTTCCGGTTTGGTAGGGACTGAAATCGTAGACGTTGAAGAGATGGTTGCGATGTTCTTACACATCCTTGCTCACGACGTTAAGAATAGAGTCATAAGAAGACAATTTGCACGGTCAGGAGAGACGGTTTCTCGGCACTTCAACACAACTCTAAGCACCGTACTACGGTTGTACGAAGTTCTGCTTAAGAAACCGGTACCGATCACGAGTTCTTGCCAGGATGGGAGGTGGAAATGGTTTGAGGTATGGATACTCAATGTTAACACACATCGTGAAGATTTTACAATCTATTCCTCACACCTGTAATGTGATGTCAAAACAGAATTGTTTAGGTGCATTGGATGGTACGTACATAAAGGTCAATGTTAGTGTCGCCGATCGACCTCGTTATAAGACGCAAAAGGGTGACATTGCTACAAATGTGTTGGGCGTTGTCTCACTGAATGGTGAATTCATTTTCGTCATGCCTAGATGGGAAGGTTCGGCTGCTGATTCACGGGTACTGAGGGATGCAATATCACGCCCAAATGGACTAGTTGTACCGAAGAGTATGAAACCCTCTCACAGACTAAAATTTGAAATAGTTACACCTTCAGTACTTACCTCATTTTATGAACAGGATATTACTACCTTTGTGATGTCAGGTATCCCAACGTAGAGGGTTTCTTGGCACCTTACAGAGGAGAACGGTACCACTTATCTGAGTGGAGAGGGGGAGGTAATGCACCTACTACACCACAGGAGTTTTTCAACATGAAACATTCCTCTGCCCGAAATGTAGTTGAGAGAGCCTTCGGTGTTCTGAAAGAACGGTGGGCGATACTCCGTGGAATGTCATACTACACTGTTCGGACTCAATGTCAGGTCATAACGGCATGCTGCTTACTCCACAACCTCGTCAACAGGGAGATGGGTTTAGACATAGGGTTGGAAGAGGGGGATAGTAGTGGGTCGGAACACGTTCCTCTTGATGGGGAGAACATTACTATCATTCAAGGATCCCCCGAATGGACTCACTCAAAAGCTAGATGACCTGGCGAACAAAATGTTCAATGCATGGAATCAA

mRNA sequence

ATGGGAGCAGTACACAAGTCATATGGAACATGTGCAGAAGCGGAGTATGCATTTAGGCGTTTCGTAATGGGGACCAGTGGTCGAGCTAACCTCATGGATGAACATGCAGCGTGTCGTACCCGACCCATAAGGGCAAATGGTCGAAATGTGGGAAAATGTTATAGTCTGAGTAGGATGTTCGTAGGGAACAAGTGCATTGCAAATGGATTCTGTAACACCACACGAGCTTGTTTCCATACTTCCATAATGGTTGACTCCCAACGTCAATTATTCAACCTGATTAACTTCTTCATGACCGACCGTCTTAGGATAGAAAACCAAACTCCCTACATCAAACATCAGAACAGACAATTAGCCTGCTTTCGGTTGACCCATGAAAGTGACCTATGTTGTCGAGAGAGCACGAGGATGGATAGGAGATGTTTCGCCATCCTATGCAGTATGCTTAGGACGACTTCCGGTTTGGTAGGGACTGAAATCGTAGACGTTGAAGAGATGGTTGCGATGTTCTTACACATCCTTGCTCACGACGTTAAGAATAGAGTCATAAGAAGACAATTTGCACGGTCAGGAGAGACGGTTTCTCGGCACTTCAACACAACTCTAAGCACCGTACTACGGTTGTACGAAGTTCTGCTTAAGAAACCGGTACCGATCACGAGTTCTTGCCAGGATGGGAGGTGGAAATGGTTTGAGAATTGTTTAGGTGCATTGGATGGTACGTACATAAAGGTCAATGTTAGTGTCGCCGATCGACCTCGTTATAAGACGCAAAAGGGTGACATTGCTACAAATGTGTTGGGCGTTGTCTCACTGAATGGTGAATTCATTTTCGTCATGCCTAGATGGGAAGGTTCGGCTGCTGATTCACGGGTACTGAGGGATGCAATATCACGCCCAAATGGACTAGTTGTACCGAAGAGATATTACTACCTTTGTGATGTCAGGTATCCCAACGTAGAGGGTTTCTTGGCACCTTACAGAGGAGAACGGTACCACTTATCTGAGTGGAGAGGGGGAGGTAATGCACCTACTACACCACAGGAGTTTTTCAACATGAAACATTCCTCTGCCCGAAATGTAGTTGAGAGAGCCTTCGGTGTTCTGAAAGAACGGTGGGCGATACTCCGTGGAATGTCATACTACACTGTTCGGACTCAATGTCAGGTCATAACGGCATGCTGCTTACTCCACAACCTCGTCAACAGGGAGATGGGTTTAGACATAGGGTTGGAAGAGGGGGATAGTAGTGGGTCGGAACACGTTCCTCTTGATGGGGAGAACATTACTATCATTCAAGGATCCCCCGAATGGACTCACTCAAAAGCTAGATGACCTGGCGAACAAAATGTTCAATGCATGGAATCAA

Coding sequence (CDS)

ATGGGAGCAGTACACAAGTCATATGGAACATGTGCAGAAGCGGAGTATGCATTTAGGCGTTTCGTAATGGGGACCAGTGGTCGAGCTAACCTCATGGATGAACATGCAGCGTGTCGTACCCGACCCATAAGGGCAAATGGTCGAAATGTGGGAAAATGTTATAGTCTGAGTAGGATGTTCGTAGGGAACAAGTGCATTGCAAATGGATTCTGTAACACCACACGAGCTTGTTTCCATACTTCCATAATGGTTGACTCCCAACGTCAATTATTCAACCTGATTAACTTCTTCATGACCGACCGTCTTAGGATAGAAAACCAAACTCCCTACATCAAACATCAGAACAGACAATTAGCCTGCTTTCGGTTGACCCATGAAAGTGACCTATGTTGTCGAGAGAGCACGAGGATGGATAGGAGATGTTTCGCCATCCTATGCAGTATGCTTAGGACGACTTCCGGTTTGGTAGGGACTGAAATCGTAGACGTTGAAGAGATGGTTGCGATGTTCTTACACATCCTTGCTCACGACGTTAAGAATAGAGTCATAAGAAGACAATTTGCACGGTCAGGAGAGACGGTTTCTCGGCACTTCAACACAACTCTAAGCACCGTACTACGGTTGTACGAAGTTCTGCTTAAGAAACCGGTACCGATCACGAGTTCTTGCCAGGATGGGAGGTGGAAATGGTTTGAGAATTGTTTAGGTGCATTGGATGGTACGTACATAAAGGTCAATGTTAGTGTCGCCGATCGACCTCGTTATAAGACGCAAAAGGGTGACATTGCTACAAATGTGTTGGGCGTTGTCTCACTGAATGGTGAATTCATTTTCGTCATGCCTAGATGGGAAGGTTCGGCTGCTGATTCACGGGTACTGAGGGATGCAATATCACGCCCAAATGGACTAGTTGTACCGAAGAGATATTACTACCTTTGTGATGTCAGGTATCCCAACGTAGAGGGTTTCTTGGCACCTTACAGAGGAGAACGGTACCACTTATCTGAGTGGAGAGGGGGAGGTAATGCACCTACTACACCACAGGAGTTTTTCAACATGAAACATTCCTCTGCCCGAAATGTAGTTGAGAGAGCCTTCGGTGTTCTGAAAGAACGGTGGGCGATACTCCGTGGAATGTCATACTACACTGTTCGGACTCAATGTCAGGTCATAACGGCATGCTGCTTACTCCACAACCTCGTCAACAGGGAGATGGGTTTAGACATAGGGTTGGAAGAGGGGGATAGTAGTGGGTCGGAACACGTTCCTCTTGATGGGGAGAACATTACTATCATTCAAGGATCCCCCGAATGGACTCACTCAAAAGCTAGATGA

Protein sequence

MGAVHKSYGTCAEAEYAFRRFVMGTSGRANLMDEHAACRTRPIRANGRNVGKCYSLSRMFVGNKCIANGFCNTTRACFHTSIMVDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFAILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLSTVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIATNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGFLAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYTVRTQCQVITACCLLHNLVNREMGLDIGLEEGDSSGSEHVPLDGENITIIQGSPEWTHSKAR

Homology

[Close]

BLAST of Lcy12g000370 vs. ExPASy Swiss-Prot
Match: Q5U538 (Putative nuclease HARBI1 OS=Xenopus laevis OX=8355 GN=harbi1 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-07
Identity = 48/190 (25.26%), Postives = 81/190 (42.63%), Query Frame = 0


Query: 235 LGALDGTYIKVNVSVADRPRYKTQKGDIATNVLGVVSLNGEFIFVMPRWEGSAADSRVLR 294
           LG +D T + +    ++   Y   +G  + N L V    G  ++      GS  D+ VL 
Sbjct: 145 LGVVDCTQVNIKAPNSEDLSYVNSRGLHSLNCLLVCDARGSLLWAETSRLGSMQDNAVLH 204

Query: 295 DAISRPNGLVVPKRY---YYLCDVRYPNVEGFLAPYRGERYHLSEWRGGGNAPTTPQEF- 354
              S  +GL   K +   + L D  +      + P +               P +P ++ 
Sbjct: 205 Q--SELSGLFETKMHKQGWLLADNAFILRPWLMTPVQ--------------IPESPSDYR 264

Query: 355 FNMKHSSARNVVERAFGVLKERWAIL---RGMSYYTVRTQCQVITACCLLHNLVNREMGL 414
           +NM H++  +V+ER    L+ R+  L   R    Y+     Q++ ACC+LHN+   +  L
Sbjct: 265 YNMAHTATHSVMERTQRSLRLRFRCLDGSRATLQYSPEKSAQIVLACCILHNIA-LQHDL 317

Query: 415 DIGLEEGDSS 418
           DI  E G +S
Sbjct: 325 DIVSESGATS 317

[Close]

BLAST of Lcy12g000370 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 2.6e-133
Identity = 232/357 (64.99%), Postives = 275/357 (77.03%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL CR+STRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL+E LLKKP P+ + C D RW+WFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEGSAADSR+LRDA+SRPN L VPK YYYL D  YPN EGF
Sbjct: 194 TNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EWRG  NAP+T +EFFNMKHSSARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 5.9e-133
Identity = 231/357 (64.71%), Postives = 275/357 (77.03%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL CR+STRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL++ LLKKP P+ + C D RW+WFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEGSAADSR+LRDA+SRPN L VPK YYYL D  YPN EGF
Sbjct: 194 TNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EWRG  NAP+T +EFFNMKHSSARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. ExPASy TrEMBL
Match: A0A5A7TWH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001380 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 3.8e-132
Identity = 231/357 (64.71%), Postives = 273/357 (76.47%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL CRESTRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRESTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHILAHDVKNRVI+R+F RSGET+S HFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISCHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL+E LLKKP P+ + C D RW+WFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEGSAADSR+LRDA+SRPNGL VPK YYYL D  YPN EGF
Sbjct: 194 TNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYYYLVDAGYPNPEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EW G  NAP+T +EFFNMKH SARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 5.0e-132
Identity = 231/357 (64.71%), Postives = 273/357 (76.47%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL CR+STRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL+E LLKKP P+ + C D RWKWFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEG AADSR+LRDA+SRPN L VPK YYYL D  Y N EGF
Sbjct: 194 TNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYYYLVDAGYQNAEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EWRG  NAP+T +EFFNMKHSSARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 1.1e-131
Identity = 229/357 (64.15%), Postives = 272/357 (76.19%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL C +STRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCHQSTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHIL HDVKNRVI+R+F RSGET+SRHFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRSGETISRHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL+E LLKKP P+ + C D RW+WFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEGSAADSR+LRDA+SRPN L VPK YYYL D  YPN EGF
Sbjct: 194 TNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EWRG  NAP+T +EFFNMKHS ARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTTADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.3 bits (1248), Expect = 5.5e-133
Identity = 232/357 (64.99%), Postives = 275/357 (77.03%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL CR+STRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL+E LLKKP P+ + C D RW+WFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEGSAADSR+LRDA+SRPN L VPK YYYL D  YPN EGF
Sbjct: 194 TNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EWRG  NAP+T +EFFNMKHSSARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 484.2 bits (1245), Expect = 1.2e-132
Identity = 231/357 (64.71%), Postives = 275/357 (77.03%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL CR+STRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL++ LLKKP P+ + C D RW+WFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEGSAADSR+LRDA+SRPN L VPK YYYL D  YPN EGF
Sbjct: 194 TNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EWRG  NAP+T +EFFNMKHSSARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. NCBI nr
Match: KAA0047510.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 481.5 bits (1238), Expect = 7.9e-132
Identity = 231/357 (64.71%), Postives = 273/357 (76.47%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL CRESTRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRESTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHILAHDVKNRVI+R+F RSGET+S HFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISCHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL+E LLKKP P+ + C D RW+WFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEGSAADSR+LRDA+SRPNGL VPK YYYL D  YPN EGF
Sbjct: 194 TNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYYYLVDAGYPNPEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EW G  NAP+T +EFFNMKH SARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 481.1 bits (1237), Expect = 1.0e-131
Identity = 231/357 (64.71%), Postives = 273/357 (76.47%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL CR+STRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL+E LLKKP P+ + C D RWKWFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEG AADSR+LRDA+SRPN L VPK YYYL D  Y N EGF
Sbjct: 194 TNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYYYLVDAGYQNAEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EWRG  NAP+T +EFFNMKHSSARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 479.9 bits (1234), Expect = 2.3e-131
Identity = 229/357 (64.15%), Postives = 272/357 (76.19%), Query Frame = 0


Query: 84  VDSQRQLFNLINFFMTDRLRIENQTPYIKHQNRQLACFRLTHESDLCCRESTRMDRRCFA 143
           + SQRQL  ++     D  RI +     +H+ RQLA FR+ H SDL C +STRMDRRCFA
Sbjct: 14  IASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCHQSTRMDRRCFA 73

Query: 144 ILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNTTLS 203
           ILC +LRT +GL  TE+VDVEEMVAMFLHIL HDVKNRVI+R+F RSGET+SRHFN  L 
Sbjct: 74  ILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRSGETISRHFNMVLL 133

Query: 204 TVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIA 263
            V+RL+E LLKKP P+ + C D RW+WFENCLGALDGTYIKVNV  +DR RY+T+KG++A
Sbjct: 134 AVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVA 193

Query: 264 TNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGF 323
           TNVLGV    G+F++V+  WEGSAADSR+LRDA+SRPN L VPK YYYL D  YPN EGF
Sbjct: 194 TNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGF 253

Query: 324 LAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYT 383
           LAPYRG+RYHL EWRG  NAP+T +EFFNMKHS ARNV+ERAFGVLK RWAILRG SYY 
Sbjct: 254 LAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLKGRWAILRGKSYYP 313

Query: 384 VRTQCQVITACCLLHNLVNREMGLDIGLEEG-DSSGSEHVPLDGENITIIQGSPEWT 440
           V  QC+ I ACCLLHNL+NREM  +  +E+  D   S H     ++I  I+ S EW+
Sbjct: 314 VEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTTADDIHYIETSNEWS 369

[Close]

BLAST of Lcy12g000370 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 186.4 bits (472), Expect = 4.9e-47
Identity = 104/308 (33.77%), Postives = 164/308 (53.25%), Query Frame = 0


Query: 131 CRESTRMDRRCFAILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKNRVIRRQFARS 190
           C E+ RMD+  F  LC +L+T   L  T  + +E  +A+FL I+ H+++ R ++  F  S
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 191 GETVSRHFNTTLSTVLRLYEVLLKKPVPITSSCQDGRWKWFENCLGALDGTYIKVNVSVA 250
           GET+SRHFN  L+ V+ + +   +      S   +    +F++C+G +D  +I V V V 
Sbjct: 102 GETISRHFNNVLNAVIAISKDFFQP--NSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVD 161

Query: 251 DRPRYKTQKGDIATNVLGVVSLNGEFIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYY 310
           ++  ++   G +  NVL   S +  F +V+  WEGSA+D +VL  A++R N L VP+  Y
Sbjct: 162 EQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKY 221

Query: 311 YLCDVRYPNVEGFLAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLK 370
           Y+ D +YPN+ GF+APY G            N+    +E FN +H      + R FG LK
Sbjct: 222 YIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHRAIHRTFGALK 281

Query: 371 ERWAILRGMSYYTVRTQCQVITACCLLHNLVNREMGLDIGL----EE--GDSSGSEHVPL 430
           ER+ IL     Y ++TQ +++ A C LHN V  E   D+      EE   ++     V L
Sbjct: 282 ERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETLAEAGEDREVAL 338

Query: 431 DGENITII 433
           + E + I+
Sbjct: 342 EEEQVEIV 338

[Close]

BLAST of Lcy12g000370 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 5.8e-32
Identity = 84/265 (31.70%), Postives = 126/265 (47.55%), Query Frame = 0


Query: 121 FRLTHESDLCCRESTRMDRRCFAILCSMLRTTSGLVGTEIVDVEEMVAMFLHILAHDVKN 180
           +R   +    C +  RM   CF  LC+ML+T   L  T  + +EE VAMFL I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 181 RVIRRQFARSGETVSRHFNTTLSTVLRLYEVLLKKP-------VPITSSCQDGRWKWFEN 240
           R +  +F R+ ETV R F   L+    L    ++ P       +P         W +F  
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 241 CLGALDGTYIKVNVSVADRPRYKTQKGDIATNVLGVVSLNGEFIFVMPRWEGSAADSRVL 300
            +GA+DGT++ V V    +  Y  +  + + N++ +  L   F ++     GS  D+ VL
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 235

Query: 301 RDAISRPNGL-VVPKRYYYLCDVRYPNVEGFLAPYRGE-----RYHLSEWRGGGNAPTTP 360
           + A    +   + P   YYL D  YPN +G LAPYR       RYH+S++  G   P   
Sbjct: 236 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPR-PRNK 295

Query: 361 QEFFNMKHSSARNVVERAFGVLKER 373
            E FN  H+S R+V+ER F + K +
Sbjct: 296 HELFNQCHTSLRSVIERTFRIWKNK 319

[Close]

BLAST of Lcy12g000370 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 7.3e-27
Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 276 FIFVMPRWEGSAADSRVLRDAISRPNGLVVPKRYYYLCDVRYPNVEGFLAPYRGERYHLS 335
           FI+V+  WEGSA DSRVL DA+          R +YL D  + N   FLAP+RG RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDAL----------RKFYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 336 EWRGGGNAPTTPQEFFNMKHSSARNVVERAFGVLKERWAILRGMSYYTVRTQCQVITACC 395
           E+ G    P TP E FN++H S RNV+ER FG+ K R+AI +    ++ + Q  ++  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 396 LLHNLVNREMGLD 409
            LHN + +E   D
Sbjct: 145 ALHNFLRKECRSD 147

[Close]

BLAST of Lcy12g000370 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-14
Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 228 WKWFENCLGALDGTYIKVNVSVADRPRYKTQKGDIATNVLGVVSLNGEFIFVMPRWEGSA 287
           + +F++C+GA+D T+I   VS    P ++ +KGDI+ N+L   + + EF++V+  WEGSA
Sbjct: 19  YPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSA 78

Query: 288 ADSRVLRDAISR-PNGLVVPK 308
            DS+VL DA++R  N L VP+
Sbjct: 79  HDSKVLNDALTRNSNRLPVPE 99

[Close]

BLAST of Lcy12g000370 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 5.1e-12
Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 308 RYYYLCDVRYPNVEGFLAPYRGERYHLSEWRGGGNAPTTPQEFFNMKHSSARNVVERAFG 367
           R YYL +  YP   G+L P+R   YHL ++ G G  P T QE FN KH   R+V++R FG
Sbjct: 93  RKYYLVNSVYPTTTGYLGPHRRILYHLGQF-GRGGPPVTVQELFNRKHLDLRSVIDRTFG 152

Query: 368 VLKERWAIL 377
           V K +W IL
Sbjct: 153 VWKAKWRIL 160

The following BLAST results are available for this feature:

BLAST of Lcy12g000370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5U538	2.2e-07	25.26	Putative nuclease HARBI1 OS=Xenopus laevis OX=8355 GN=harbi1 PE=2 SV=1	[more]

BLAST of Lcy12g000370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDX0	2.6e-133	64.99	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TXW1	5.9e-133	64.71	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TWH8	3.8e-132	64.71	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U476	5.0e-132	64.71	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U9H2	1.1e-131	64.15	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy12g000370 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035620.1	5.5e-133	64.99	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]
KAA0046727.1	1.2e-132	64.71	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]
KAA0047510.1	7.9e-132	64.71	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048361.1	1.0e-131	64.71	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051057.1	2.3e-131	64.15	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy12g000370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	4.9e-47	33.77	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	5.8e-32	31.70	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	7.3e-27	43.61	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28950.1	1.4e-14	43.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G10890.1	5.1e-12	47.83	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 238..399 e-value: 1.5E-23 score: 83.2
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 107..402
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 107..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g000370.1	Lcy12g000370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding