Homology
BLAST of Lcy12g000220 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 5.2e-34
Identity = 133/497 (26.76%), Postives = 222/497 (44.67%), Query Frame = 0
Query: 7 AKVIGAFVGDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANG----KFTWSR 66
A +IG GDFN +R + + S + I+ L+D+ FT+ R
Sbjct: 137 ALIIG---GDFNYTLDARDRNVPKKRDSSESVLRELIAHFSLVDVWREQNPETVAFTYVR 196
Query: 67 MGD-RGAASRLNKMIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSP--FRF 126
+ D + SR++++ I+ + + +RL P SDH ++L + P + F
Sbjct: 197 VRDGHVSQSRIDRIYISSHLMS-RAQSSTIRL-APFSDHNCVSLRMSIAPSLPKAAYWHF 256
Query: 127 ENMWLENPDFRKNMDIWWNGQNPNGWAGFR---------FMKKLKGLKSYIRSWNKDVFG 186
N LE+ F K++ W GW F+ + LK + + K V G
Sbjct: 257 NNSLLEDEGFAKSVRDTW-----RGWRAFQDEFATLNQWWDVGKVHLKLLCQEYTKSVSG 316
Query: 187 NLNDK----KSNILQRIDHLDSLEEQGVIQPEDIEERRSLRASLMEITVNDQRRLNQKCK 246
N + +L L E+Q +Q E +E + +LR + R + +
Sbjct: 317 QRNAEIEALNGEVLDLEQRLSGSEDQ-ALQCEYLERKEALR----NMEQRQARGAFVRSR 376
Query: 247 LRWMKDGDENTSFFHRWASAMKRKAYIAAIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDD 306
++ + D D + FF+ + I + +EDG L I + FY L++ D
Sbjct: 377 MQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDP 436
Query: 307 IPRFVIDNISWVPL---DDHSNVLLEEPFKEEEIFRAIQALGNQKSPGPNGMTGEFFKNF 366
I + + W L + LE P +E+ +A++ + + KSPG +G+T EFF+ F
Sbjct: 437 ISPDACEEL-WDGLPVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFF 496
Query: 367 WNILKHDLVEVFHEFFKNGIINTKTNEKYICLIPKKKKASNIKDFRPISLVTSLYKIIAK 426
W+ L D V E FK G + + L+PKK IK++RP+SL+++ YKI+AK
Sbjct: 497 WDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAK 556
Query: 427 VLAERLKKVLPKTISDCQAAFVHGRQILDSILVANETVEEYRANKKKRVLLKLDLEKAYD 481
++ RLK VL + I Q+ V GR I D++ + + + R L LD EKA+D
Sbjct: 557 AISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSLAFLSLDQEKAFD 616
BLAST of Lcy12g000220 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 1.3e-24
Identity = 137/645 (21.24%), Postives = 251/645 (38.91%), Query Frame = 0
Query: 14 VGDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMA----NGKFTWSRMGDRGAA 73
+GDFN + +R + N+ ++ N + DLIDI + ++T+
Sbjct: 143 MGDFNTPLSILDRSTRQKVNKDTQELNSALHQTDLIDIYRTLHPKSTEYTFF-SAPHHTY 202
Query: 74 SRLNKMIITKDWAEVFKEFNLVRLQRPTSDHFPIALSI--------GAMKWGPSPFRFEN 133
S+++ ++ +K K ++ SDH I L + + W + +
Sbjct: 203 SKIDHIVGSKALLSKCKRTEII--TNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLND 262
Query: 134 MWLENPDFRKNMDIWWNGQN-----PNGWAGFRFM--KKLKGLKSYIRSWNKDVFGNLND 193
W+ N + + +N N W F+ + K L +Y R + L
Sbjct: 263 YWVHNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAYKRKQERSKIDTLTS 322
Query: 194 KKSNILQRIDHLDSLEEQGVIQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGD 253
+ + +EQ + +E +RA L EI + + + + + +
Sbjct: 323 QLKEL--------EKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERIN 382
Query: 254 ENTSFFHRWASAMKRKAYIAAIDSEDGRFLSSEAEIEEEIIQFYTKLYTK-----DDIPR 313
+ R + K I I ++ G + EI+ I ++Y LY +++
Sbjct: 383 KIDRPLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDT 442
Query: 314 FVIDNISWVPLDDHSNVLLEEPFKEEEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKH 373
F +D + L+ L P EI I +L +KSPGP+G T EF++ + L
Sbjct: 443 F-LDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVP 502
Query: 374 DLVEVFHEFFKNGIINTKTNEKYICLIPKKKKASNIKD-FRPISLVTSLYKIIAKVLAER 433
L+++F K GI+ E I LIPK + + K+ FRPISL+ KI+ K+LA R
Sbjct: 503 FLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANR 562
Query: 434 LKKVLPKTISDCQAAFVHGRQILDSILVANETVEEY-RANKKKRVLLKLDLEKAYDKVSW 493
+++ + K I Q F+ G Q +I + ++ RA K V++ +D EKA+DK+
Sbjct: 563 IQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQ 622
Query: 494 EFLDVVLEFKGF---------------------------------GDAISCSIHYCI--- 553
F+ L G G C + +
Sbjct: 623 PFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNI 682
Query: 554 ----------ERRIIKELSMGKDHVEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEG 587
+ + IK + +GK+ V++++ FADD +++ N N +++ +
Sbjct: 683 VLEVLARAIRQEKEIKGIQLGKEEVKLSL--FADDMIVYLENPIVSAQNLLKLISNFSKV 742
BLAST of Lcy12g000220 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 110.2 bits (274), Expect = 1.2e-22
Identity = 132/508 (25.98%), Postives = 217/508 (42.72%), Query Frame = 0
Query: 14 VGDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDI-----PMANGKFTWSRMGDRGA 73
VGDFN +R + NR K + + DL DI P G +S G
Sbjct: 150 VGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQMDLTDIYRTFYPKTKGYTFFS--APHGT 209
Query: 74 ASRLNKMIITKDWAEVFKEFNLVRLQRPTSDHFPIALSI-GAMKWGPSPFRFE------N 133
S+++ +I K +K +V SDH + L + G F ++ N
Sbjct: 210 FSKIDHIIGHKTGLNRYKNIEIVPC--ILSDHHGLRLIFNNNINNGKPTFTWKLNNTLLN 269
Query: 134 MWLENPDFRKNM-DIWWNGQN-----PNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDK 193
L +K + D +N PN W +K+++R K + + + K
Sbjct: 270 DTLVKEGIKKEIKDFLEFNENEATTYPNLW---------DTMKAFLR--GKLIALSASKK 329
Query: 194 K---SNILQRIDHLDSLEEQGVIQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKD 253
K ++ HL +LE++ P +RS R ++++ + +NQ R ++
Sbjct: 330 KRETAHTSSLTTHLKALEKKEANSP-----KRSRRQEIIKL----RGEINQVETRRTIQR 389
Query: 254 GDENTSFFH-----------RWASAMKRKAYIAAIDSEDGRFLSSEAEIEEEIIQFYTKL 313
++ S+F R + K I I +E G + EI+ I FY +L
Sbjct: 390 INQTRSWFFEKINKIDKPLARLTKGHRDKILINKIRNEKGDITTDPEEIQNTIRSFYKRL 449
Query: 314 YTK-----DDIPRFVIDNISWVPLDDHSNVLLEEPFKEEEIFRAIQALGNQKSPGPNGMT 373
Y+ D++ +F +D L+ L P +EI I +L +KSPGP+G +
Sbjct: 450 YSTKLENLDEMDKF-LDRYQVPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFS 509
Query: 374 GEFFKNFWNILKHDLVEVFHEFFK----NGIINTKTNEKYICLIPK-KKKASNIKDFRPI 433
EF++ F K DL+ + H+ F G + E I LIPK +K + I++FRPI
Sbjct: 510 AEFYQTF----KEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPI 569
Query: 434 SLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSILVANETVEEYRANK-KK 479
SL+ KI+ K+LA R+++ + I Q F+ G Q +I + + K K
Sbjct: 570 SLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKDKN 628
BLAST of Lcy12g000220 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 2.9e-21
Identity = 120/487 (24.64%), Postives = 209/487 (42.92%), Query Frame = 0
Query: 14 VGDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMA----NGKFTWSRMGDRGAA 73
VGDFN V +R + ++ + N I DL DI ++T+ G
Sbjct: 142 VGDFNTPLAVLDRSSKKKLSKEILDLNSTIQHLDLTDIYRTFHPNKTEYTFFSSA-HGTY 201
Query: 74 SRLNKMIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIG--------AMKWGPSPFRFEN 133
S+++ ++ K FK+ ++ SDH I + + W + ++
Sbjct: 202 SKIDHILGHKSNLSKFKKIEIIPC--IFSDHHGIKVELNNNRNLHTHTKTWKLNNLMLKD 261
Query: 134 MWL------ENPDF-RKNMDIWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLND 193
W+ E F +N + N QN A K L+++++ ++ NL
Sbjct: 262 TWVIDEIKKEITKFLEQNNNQDTNYQNLWDTAKAVLRGKFIALQAFLKKTEREEVNNL-- 321
Query: 194 KKSNILQRIDHLDSL--EEQGVIQPEDIEERRSLRASLMEITVNDQRRLNQ--KCKLRWM 253
+ HL L EE +P +E +RA L EI ++R + Q K K +
Sbjct: 322 --------MGHLKQLEKEEHSNPKPSRRKEITKIRAELNEI--ENKRIIQQINKSKSWFF 381
Query: 254 KDGDENTSFFHRWASAMKRKAYIAAIDSEDGRFLSSEAEIEEEIIQFYTKLYTK-----D 313
+ ++ + K+ I++I + + + +EI++ + ++Y KLY+
Sbjct: 382 EKINKIDKPLANLTRKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKYENLK 441
Query: 314 DIPRFVIDNISWVPLDDHSNVLLEEPFKEEEIFRAIQALGNQKSPGPNGMTGEFFKNFWN 373
+I ++ ++ L +L P EI IQ L +KSPGP+G T EF++ F
Sbjct: 442 EIDQY-LEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKE 501
Query: 374 ILKHDLVEVFHEFFKNGIINTKTNEKYICLIPKKKKASNIKD-FRPISLVTSLYKIIAKV 433
L L+ +F K GI+ E I LIPK K K+ +RPISL+ KI+ K+
Sbjct: 502 ELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKI 561
Query: 434 LAERLKKVLPKTISDCQAAFVHGRQILDSILVANETVEEYRANKKK-RVLLKLDLEKAYD 471
L R+++ + K I Q F+ G Q +I + ++ K K ++L +D EKA+D
Sbjct: 562 LTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEKAFD 612
BLAST of Lcy12g000220 vs. ExPASy Swiss-Prot
Match:
Q03274 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)
HSP 1 Score: 47.4 bits (111), Expect = 9.5e-04
Identity = 42/174 (24.14%), Postives = 79/174 (45.40%), Query Frame = 0
Query: 311 PFKEEEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNE 370
P EEI AI+ +PG +G+T + L + V++ G + T
Sbjct: 5 PIAREEIQCAIKG-WKPSAPGSDGLTVQAITR--TRLPRNFVQL---HLLRGHVPTPWTA 64
Query: 371 KYICLIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQI 430
LIPK N ++RPI++ ++L +++ ++LA+RL+ + + Q +
Sbjct: 65 MRTTLIPKDGDLENPSNWRPITIASALQRLLHRILAKRLEAAV--ELHPAQKGYARIDGT 124
Query: 431 LDSILVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGFGDAIS 485
L + L+ + + R +K ++ LD+ KA+D VS + L+ G + S
Sbjct: 125 LVNSLLLDTYISSRREQRKTYNVVSLDVRKAFDTVSHSSICRALQRLGIDEGTS 170
BLAST of Lcy12g000220 vs. ExPASy TrEMBL
Match:
A5BCI7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_029474 PE=4 SV=1)
HSP 1 Score: 548.9 bits (1413), Expect = 3.7e-152
Identity = 326/1041 (31.32%), Postives = 494/1041 (47.45%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E+L SR SM+ F+ FIS C+LID+P+ + FTWS M RL++
Sbjct: 802 GDFNVIRRSSEKLGGSRXTPSMKXFDDFISDCELIDLPLRSASFTWSNMQVNXVCKRLDR 861
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W + F + L R TSDH+PI L KWGP+PFRFENMWL++P F++N
Sbjct: 862 FLYSNEWEQAFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFG 921
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW NGW G +FM+KL+ +K+ ++ WNK FG L+ +K +IL + + DSLE++G
Sbjct: 922 RWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGG 981
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ E + +R + L E+ + ++ QK +++W+K+GD N+ FFH+ A+ + + +I
Sbjct: 982 LSHELLAQRALKKGELEELILREEIHWRQKARVKWVKEGDCNSRFFHKVANGRRNRKFIK 1041
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E+G +++ I+EEI++++ KLYT + ++ + W P+ S LE PF E
Sbjct: 1042 ELENENGLMMNNSESIKEEILRYFEKLYTSPSGESWRVEGLDWSPISGESAFRLESPFTE 1101
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EEIF+AI + K+PGP+G T F++ W ++K DLV+VF EF ++GIIN TN +I
Sbjct: 1102 EEIFKAIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIV 1161
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
L+PKK + I DFRPISL+TSLYKIIAKVLA R++ VL +TI Q AFV GRQILD++
Sbjct: 1162 LLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAFVQGRQILDAV 1221
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGFG-------------- 494
L+ANE V+E R + ++ V+ K+D EKAYD VSW+FLD VLE KGFG
Sbjct: 1222 LIANEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWRKWMRGCLSSV 1281
Query: 495 -----------------------------------DAISCSIHYCIERRIIKELSMGKDH 554
D +S + ER +++ +G++
Sbjct: 1282 SFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNR 1341
Query: 555 VEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEGDGLSLNRAKTSIIGINMHMDIIRE 614
V+ LQFADDT+ F + E M VL++ GL +N K++I GIN+ + +
Sbjct: 1342 TRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSR 1401
Query: 615 RAEKMGCRFENFPINYLGFPLGGE-----LW----------------------------- 674
AE + C+ +PI YLG PLGG W
Sbjct: 1402 LAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQ 1461
Query: 675 ----------------LASTALK--------LWVGTQGFCLRKEVADFGLILKETFPNST 734
AS A K LW G G R + ++ ++ K P S
Sbjct: 1462 SCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV-GEGKRDHLVNWDVVCK---PKSR 1521
Query: 735 NLLSFRK-------------------------------NASISECWNNNH---------- 794
L F K S S W+ N+
Sbjct: 1522 GGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPW 1581
Query: 795 ------------------------------------------------------------ 843
Sbjct: 1582 KAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILG 1641
BLAST of Lcy12g000220 vs. ExPASy TrEMBL
Match:
A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)
HSP 1 Score: 547.0 bits (1408), Expect = 1.4e-151
Identity = 324/1041 (31.12%), Postives = 494/1041 (47.45%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E+L SR SM+ F+ FIS C+LID+P+ + FTWS M RL++
Sbjct: 950 GDFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDR 1009
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W + F + L R TSDH+PI L KWGP+PFRFENMWL++P F++N
Sbjct: 1010 FLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFG 1069
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW NGW G +FM+KL+ +K+ ++ WNK FG L+ +K +IL + + DSLE++G
Sbjct: 1070 RWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSALVNFDSLEQEGG 1129
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ E + +R + L E+ + ++ QK +++W+K+GD N+ FFH+ A+ + + +I
Sbjct: 1130 LSHELLAQRAIKKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIK 1189
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E+G+ +++ I+EEI++++ KLYT + ++ + W P+ S V LE PF E
Sbjct: 1190 ELENENGQMMNNSESIKEEILRYFEKLYTSPSGESWRVEGLDWSPISGESAVRLESPFTE 1249
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EEI +AI + K+PGP+G T F++ W ++K DLV+VF EF ++GIIN TN +I
Sbjct: 1250 EEICKAIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIV 1309
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
L+PKK + I DFRPISL+TSLYKIIAKVLA R+++VL +TI Q AFV GRQILD++
Sbjct: 1310 LLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRIREVLHETIHSTQGAFVQGRQILDAV 1369
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGFG-------------- 494
L+ANE V+E R + ++ V+ K+D EKAYD VSW+FLD V+E KGFG
Sbjct: 1370 LIANEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEMKGFGIRWRKWMRGCLSSV 1429
Query: 495 -----------------------------------DAISCSIHYCIERRIIKELSMGKDH 554
D +S + ER +++ +G++
Sbjct: 1430 SFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNR 1489
Query: 555 VEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEGDGLSLNRAKTSIIGINMHMDIIRE 614
V+ LQFADDT+ F + E M VL++ GL +N K++I GIN+ + +
Sbjct: 1490 TRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSR 1549
Query: 615 RAEKMGCRFENFPINYLGFPLGGE-----LW----------------------------- 674
AE + C+ +PI YLG PLGG W
Sbjct: 1550 LAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQ 1609
Query: 675 ----------------LASTALK--------LWVGTQGFCLRKEVADFGLILKETFPNST 734
AS A K LW G G R + ++ ++ K P S
Sbjct: 1610 SCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV-GEGKRDHLVNWDVVCK---PKSR 1669
Query: 735 NLLSF------------------------------------------------------- 794
L F
Sbjct: 1670 GGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPW 1729
Query: 795 -------------------------------------------------RKNASISECWN 843
KNA IS
Sbjct: 1730 KAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILG 1789
BLAST of Lcy12g000220 vs. ExPASy TrEMBL
Match:
A5C3T9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000598 PE=4 SV=1)
HSP 1 Score: 534.6 bits (1376), Expect = 7.2e-148
Identity = 305/942 (32.38%), Postives = 483/942 (51.27%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E+L SR SMR F+ FI +L D P+ N FTWS M + RL++
Sbjct: 1660 GDFNVIRRRSEKLGGSRVTSSMRDFDGFIRESELHDSPLRNASFTWSNMQESPVCKRLDR 1719
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W F + L R TSDH+PI L KWGP+PFRFENMWL++ +F+++
Sbjct: 1720 FLYSNEWXLSFPQSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHNFKESFS 1779
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW NGW G +FM+KL+ +K+ ++ WNK+ FG L ++K +I I ++D++E++G
Sbjct: 1780 SWWREFEGNGWEGHKFMRKLQFVKAKLKDWNKNTFGLLKERKKSISDEIANIDAIEQEGA 1839
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ + + R + L E+ + ++ QK K++W+K+GD N+ FH+ A+ + K +I
Sbjct: 1840 LSSDLVALRAIRKGELEELILREEIXWKQKAKIKWVKEGDCNSKLFHKVANGRRNKNFIK 1899
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E G + S I EEI+ ++ KLY+ + ++ I W P+ + S L+ PF E
Sbjct: 1900 ILENERGLVVDSSESITEEILLYFKKLYSCPPRESWRVEGIDWSPISEESASRLDSPFAE 1959
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EIF AI L K+PGP+G T F++ W+++K DLV VF EF +GIIN TN +I
Sbjct: 1960 AEIFNAIFQLDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHNSGIINQNTNASFIV 2019
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
L+PKK ++ I DFRPISL+T LYKIIAKVL+ RL+ VL +TI Q AFV GRQILD++
Sbjct: 2020 LLPKKSQSKKISDFRPISLITCLYKIIAKVLSGRLRGVLQETIHSTQGAFVQGRQILDAV 2079
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGF--------------- 494
L+ANE V+E + + ++ V+ K+D EKAYD V+W+FLD VLE KGF
Sbjct: 2080 LIANEIVDEKKRSGEEGVVFKIDFEKAYDHVNWDFLDHVLEMKGFSPRWRSWMRGCLSSV 2139
Query: 495 ----------------------GDAISCSIHYCI------------ERRIIKELSMGKDH 554
GD +S + + ER +++ +G++
Sbjct: 2140 SYAILVNGNAKGWVKAVRGLRQGDPLSPFLFTIVADVLSRMLLKVEERNLLEGFRVGRNR 2199
Query: 555 VEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEGDGLSLNRAKTSIIGINMHMDIIRE 614
V+ LQFADDT++F E + +L++ + GL +N K+++ GIN+ + +
Sbjct: 2200 CRVSHLQFADDTILFASPREDEVQTLKSLLLVFGQISGLKVNLDKSNLFGINLDQNHLSR 2259
Query: 615 RAEKMGCRFENFPINYLGFPLGGE-----LW----------------------------- 674
A + C+ ++PI YLG PLGG W
Sbjct: 2260 LASLLDCKASDWPILYLGLPLGGNPTACGFWDPVIERISRRLDGWQKAYLSFGGRITLLH 2319
Query: 675 ----------------LASTALK--------LWVGT---QGFCLR--KEVADFGLILKET 734
AS A K LW G G +R +++ ILK+
Sbjct: 2320 SCLSHIPSYFLSLFKIPASVAAKIERLQRDFLWSGVGEGDGERIRFWEDLWWGDQILKDQ 2379
Query: 735 FPNSTNLLSFRKNASISECWNNNHQ-TWDLGLRRGLFYRESGSWEALVEILNEVQLG-SG 794
+P ++ KN IS ++ +W+ RR L E E L+ L+ + L S
Sbjct: 2380 YPRLFRVV-MDKNIPISSILGSSRPFSWNFNFRRNLTDSEIEDLERLMHSLDCLNLSTSA 2439
Query: 795 VDKLIWTLEGSGCYTTKSMFQRCVGRSSKVNMPIVELIWEHNCPNKVKVFLWSVIYRSLN 843
D W+L +G +T KS F + +W+ KVK +W V ++ +N
Sbjct: 2440 SDARSWSLCSTGLFTVKSFFTALSQMPDSSPFFPTKFVWKSQVLFKVKTSIWLVAHKKVN 2499
BLAST of Lcy12g000220 vs. ExPASy TrEMBL
Match:
A0A438IAX3 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_367 PE=4 SV=1)
HSP 1 Score: 534.3 bits (1375), Expect = 9.4e-148
Identity = 319/988 (32.29%), Postives = 485/988 (49.09%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E++ S SMR F+ FIS C+L+D P+ N FTWS M + RL++
Sbjct: 139 GDFNVIRRSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSNMQESPVCKRLDR 198
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W +F + L R TSDH+PI + WGP+PFRFENMWL++ +F++N
Sbjct: 199 FLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTPFRFENMWLQHTNFKENFR 258
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW+G GW G++FM++L+ +K+ ++ W K FG L +KK +IL + + D++E++G
Sbjct: 259 DWWSGFQGIGWEGYKFMRRLQYVKAKLKEWIKSSFGELKEKKKSILNDLANFDAIEQEGG 318
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ P+ I +R S + L E+ + ++ QK K++W+K+GD N+ F+H+ + + + YI
Sbjct: 319 LNPDLISQRVSRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVTNGRRNRKYIK 378
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E G L + I EEI+ ++ KLYT + ++ + W P+ + S + LE PF E
Sbjct: 379 ELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLESPFTE 438
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EEI +AI L K+ GP+G T F+ W+++K DLV VF EF ++GIIN TN +I
Sbjct: 439 EEISKAIFQLDRDKALGPDGFTIAIFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFII 498
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
LIPKK + I DFRPISL+TSLYKII KVL+ RL+ VL +TI Q AFV GRQILD++
Sbjct: 499 LIPKKSLSKRISDFRPISLITSLYKIIVKVLSGRLRGVLHETIHYTQGAFVQGRQILDAV 558
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGF--------------- 494
L+ANE V+E R + ++ V+ K+D EKAYD V W+FLD VLE KGF
Sbjct: 559 LIANEIVDERRRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSV 618
Query: 495 ----------------------------------GDAISCSIHYCIERRIIKELSMGKDH 554
D +S + ER +++ +G++
Sbjct: 619 SFAILVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSKMLMRAEERNMLEGFRVGRNR 678
Query: 555 VEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEGDGLSLNRAKTSIIGINMHMDIIRE 614
V+ LQFADDT+ F + E + +L++ GL +N K+SI GIN+ +
Sbjct: 679 TRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIYGINLDQAHLSR 738
Query: 615 RAEKMGCRFENFPINYLGFPLGGE-----LW----------------------------- 674
AE + C+ +PI YLG PLGG W
Sbjct: 739 LAEMLDCKASGWPILYLGLPLGGNPKACGFWDPVVERISSRLDGWQKAYLSFEGRITLIQ 798
Query: 675 ----------------LASTALK--------LWVG-------------------TQGF-- 734
A+ A K LW G T G
Sbjct: 799 SCLTHLPSYFLSLFKMPATVAAKIERLQRDFLWSGVGEGKRDHLVRWDIVYRPKTIGVRW 858
Query: 735 ---CLRKEVA----DFGLILKETFPNSTNLLSFR----------------------KNAS 794
C K +A +F LI + N + + KN S
Sbjct: 859 SHRCPWKAIAQVFQEFSLITRYVVGNGDRIRFWEDLWRGDQSLGTQYPRLFRVVVDKNIS 918
Query: 795 ISECWNNNHQ-TWDLGLRRGLFYRESGSWEALVEILNEVQLGSGV-DKLIWTLEGSGCYT 843
IS + W+L RR L E E L+ L+++ L V D +W L SG ++
Sbjct: 919 ISSVLGPSRPFLWNLNFRRNLSDSEIEDLEGLMRSLDDLYLSPSVPDARLWPLSSSGLFS 978
BLAST of Lcy12g000220 vs. ExPASy TrEMBL
Match:
A0A438CA35 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_201 PE=4 SV=1)
HSP 1 Score: 532.7 bits (1371), Expect = 2.7e-147
Identity = 313/986 (31.74%), Postives = 480/986 (48.68%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E+L SR M+ F++FI C+LID P+ + +TWS M + RL++
Sbjct: 889 GDFNVIRRSSEKLGGSRLTPCMKDFDEFIRDCELIDSPLRSVSYTWSNMQENPVCKRLDR 948
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W +VF + L R TSDH+PI L KWGP+PFRFENMWL++ F++N
Sbjct: 949 FLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFG 1008
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW+ NGW G +FM+KL+ +K+ ++ WNK FG L+ KK +IL + + DSLE++G
Sbjct: 1009 RWWSEFQGNGWEGHKFMRKLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGG 1068
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ E + +R + L E+ + ++ QK +++W+K+GD N+ FFH+ A+ + + +I
Sbjct: 1069 LSQELLVQRAFSKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIK 1128
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E G L++ I+EEI++++ KLY + ++ + W P+D S LE PF E
Sbjct: 1129 ELENESGLMLNNPESIKEEILKYFEKLYACPSRESWRVEGLDWSPIDGESASRLESPFIE 1188
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EEI++AI + K+PGP+G T F++ W+++K DLV VF EF ++GIIN TN +I
Sbjct: 1189 EEIYKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGIINQSTNASFIV 1248
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
L+PKK + I DFRPISL+TSLYKIIAKVLA RL+ VL +TI Q AFV GRQILD++
Sbjct: 1249 LLPKKSISRRISDFRPISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQILDAV 1308
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKV--------SWEFLDVVLE---------FK 494
L+ANE V+E R ++ V+ K+D EKAYD V W L F
Sbjct: 1309 LIANEIVDEKRRTGEEGVVFKIDFEKAYDHVILVNGNAKGWVKASRGLRQGDPLSPFLFT 1368
Query: 495 GFGDAISCSIHYCIERRIIKELSMGKDHVEVAILQFADDTMIFCPNEEAIMDNWWEVLIM 554
D +S + ER +++ +G++ V+ LQFADDT+ F E + VL++
Sbjct: 1369 IVADVLSRMLLKAEERNVLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLV 1428
Query: 555 ILEGDGLSLNRAKTSIIGINMHMDIIRERAEKMGCRFENFPINYLGFPLGGE-----LW- 614
GL +N K++I GIN+ + + A + C+ +PI YLG PLGG W
Sbjct: 1429 FGHISGLKVNLDKSNIFGINLEQNHLSRLAVMLDCKASGWPILYLGLPLGGNPKASGFWD 1488
Query: 615 --------------------------------------------LASTALK--------L 674
AS A K L
Sbjct: 1489 PVIERISRRLDGWQKAYLSFGGRISLIQSCLTHMPCYFLSLFRIPASVAAKIERMQREFL 1548
Query: 675 WVGTQGFCLRKEVADFGLILKE------------------------TFPNSTNLLSFR-- 734
W G G R + ++ ++ K +P L R
Sbjct: 1549 WSGV-GEGKRDHLVNWDVVCKPKSRGGLGFGKISMRNVALLGKWLWRYPRRVQLYGIRWS 1608
Query: 735 -------------------------------------------------------KNASI 794
KNA I
Sbjct: 1609 HRCPWKAIALVFQEFSKFTRFVVGDGDRIRFWDDLWWGDQPLGTQYPRLLSVVTDKNALI 1668
Query: 795 SECWNNNHQ-TWDLGLRRGLFYRESGSWEALVEILNEVQLGSGV-DKLIWTLEGSGCYTT 843
S + +W+ RR L E E+L+ L+ + + V DK W++ SG +T
Sbjct: 1669 SSILGYSRPFSWNFNFRRNLTDSEIEDLESLMRSLDRLHISPSVPDKRSWSISPSGLFTV 1728
BLAST of Lcy12g000220 vs. NCBI nr
Match:
CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])
HSP 1 Score: 548.9 bits (1413), Expect = 7.6e-152
Identity = 326/1041 (31.32%), Postives = 494/1041 (47.45%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E+L SR SM+ F+ FIS C+LID+P+ + FTWS M RL++
Sbjct: 802 GDFNVIRRSSEKLGGSRXTPSMKXFDDFISDCELIDLPLRSASFTWSNMQVNXVCKRLDR 861
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W + F + L R TSDH+PI L KWGP+PFRFENMWL++P F++N
Sbjct: 862 FLYSNEWEQAFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFG 921
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW NGW G +FM+KL+ +K+ ++ WNK FG L+ +K +IL + + DSLE++G
Sbjct: 922 RWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGG 981
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ E + +R + L E+ + ++ QK +++W+K+GD N+ FFH+ A+ + + +I
Sbjct: 982 LSHELLAQRALKKGELEELILREEIHWRQKARVKWVKEGDCNSRFFHKVANGRRNRKFIK 1041
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E+G +++ I+EEI++++ KLYT + ++ + W P+ S LE PF E
Sbjct: 1042 ELENENGLMMNNSESIKEEILRYFEKLYTSPSGESWRVEGLDWSPISGESAFRLESPFTE 1101
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EEIF+AI + K+PGP+G T F++ W ++K DLV+VF EF ++GIIN TN +I
Sbjct: 1102 EEIFKAIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIV 1161
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
L+PKK + I DFRPISL+TSLYKIIAKVLA R++ VL +TI Q AFV GRQILD++
Sbjct: 1162 LLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAFVQGRQILDAV 1221
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGFG-------------- 494
L+ANE V+E R + ++ V+ K+D EKAYD VSW+FLD VLE KGFG
Sbjct: 1222 LIANEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWRKWMRGCLSSV 1281
Query: 495 -----------------------------------DAISCSIHYCIERRIIKELSMGKDH 554
D +S + ER +++ +G++
Sbjct: 1282 SFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNR 1341
Query: 555 VEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEGDGLSLNRAKTSIIGINMHMDIIRE 614
V+ LQFADDT+ F + E M VL++ GL +N K++I GIN+ + +
Sbjct: 1342 TRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSR 1401
Query: 615 RAEKMGCRFENFPINYLGFPLGGE-----LW----------------------------- 674
AE + C+ +PI YLG PLGG W
Sbjct: 1402 LAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQ 1461
Query: 675 ----------------LASTALK--------LWVGTQGFCLRKEVADFGLILKETFPNST 734
AS A K LW G G R + ++ ++ K P S
Sbjct: 1462 SCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV-GEGKRDHLVNWDVVCK---PKSR 1521
Query: 735 NLLSFRK-------------------------------NASISECWNNNH---------- 794
L F K S S W+ N+
Sbjct: 1522 GGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPW 1581
Query: 795 ------------------------------------------------------------ 843
Sbjct: 1582 KAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILG 1641
BLAST of Lcy12g000220 vs. NCBI nr
Match:
RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 547.0 bits (1408), Expect = 2.9e-151
Identity = 324/1041 (31.12%), Postives = 494/1041 (47.45%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E+L SR SM+ F+ FIS C+LID+P+ + FTWS M RL++
Sbjct: 950 GDFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDR 1009
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W + F + L R TSDH+PI L KWGP+PFRFENMWL++P F++N
Sbjct: 1010 FLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFG 1069
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW NGW G +FM+KL+ +K+ ++ WNK FG L+ +K +IL + + DSLE++G
Sbjct: 1070 RWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSALVNFDSLEQEGG 1129
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ E + +R + L E+ + ++ QK +++W+K+GD N+ FFH+ A+ + + +I
Sbjct: 1130 LSHELLAQRAIKKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIK 1189
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E+G+ +++ I+EEI++++ KLYT + ++ + W P+ S V LE PF E
Sbjct: 1190 ELENENGQMMNNSESIKEEILRYFEKLYTSPSGESWRVEGLDWSPISGESAVRLESPFTE 1249
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EEI +AI + K+PGP+G T F++ W ++K DLV+VF EF ++GIIN TN +I
Sbjct: 1250 EEICKAIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIV 1309
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
L+PKK + I DFRPISL+TSLYKIIAKVLA R+++VL +TI Q AFV GRQILD++
Sbjct: 1310 LLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRIREVLHETIHSTQGAFVQGRQILDAV 1369
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGFG-------------- 494
L+ANE V+E R + ++ V+ K+D EKAYD VSW+FLD V+E KGFG
Sbjct: 1370 LIANEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEMKGFGIRWRKWMRGCLSSV 1429
Query: 495 -----------------------------------DAISCSIHYCIERRIIKELSMGKDH 554
D +S + ER +++ +G++
Sbjct: 1430 SFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNR 1489
Query: 555 VEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEGDGLSLNRAKTSIIGINMHMDIIRE 614
V+ LQFADDT+ F + E M VL++ GL +N K++I GIN+ + +
Sbjct: 1490 TRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSR 1549
Query: 615 RAEKMGCRFENFPINYLGFPLGGE-----LW----------------------------- 674
AE + C+ +PI YLG PLGG W
Sbjct: 1550 LAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQ 1609
Query: 675 ----------------LASTALK--------LWVGTQGFCLRKEVADFGLILKETFPNST 734
AS A K LW G G R + ++ ++ K P S
Sbjct: 1610 SCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV-GEGKRDHLVNWDVVCK---PKSR 1669
Query: 735 NLLSF------------------------------------------------------- 794
L F
Sbjct: 1670 GGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPW 1729
Query: 795 -------------------------------------------------RKNASISECWN 843
KNA IS
Sbjct: 1730 KAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILG 1789
BLAST of Lcy12g000220 vs. NCBI nr
Match:
CAN66330.1 (hypothetical protein VITISV_000598 [Vitis vinifera])
HSP 1 Score: 534.6 bits (1376), Expect = 1.5e-147
Identity = 305/942 (32.38%), Postives = 483/942 (51.27%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E+L SR SMR F+ FI +L D P+ N FTWS M + RL++
Sbjct: 1660 GDFNVIRRRSEKLGGSRVTSSMRDFDGFIRESELHDSPLRNASFTWSNMQESPVCKRLDR 1719
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W F + L R TSDH+PI L KWGP+PFRFENMWL++ +F+++
Sbjct: 1720 FLYSNEWXLSFPQSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHNFKESFS 1779
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW NGW G +FM+KL+ +K+ ++ WNK+ FG L ++K +I I ++D++E++G
Sbjct: 1780 SWWREFEGNGWEGHKFMRKLQFVKAKLKDWNKNTFGLLKERKKSISDEIANIDAIEQEGA 1839
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ + + R + L E+ + ++ QK K++W+K+GD N+ FH+ A+ + K +I
Sbjct: 1840 LSSDLVALRAIRKGELEELILREEIXWKQKAKIKWVKEGDCNSKLFHKVANGRRNKNFIK 1899
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E G + S I EEI+ ++ KLY+ + ++ I W P+ + S L+ PF E
Sbjct: 1900 ILENERGLVVDSSESITEEILLYFKKLYSCPPRESWRVEGIDWSPISEESASRLDSPFAE 1959
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EIF AI L K+PGP+G T F++ W+++K DLV VF EF +GIIN TN +I
Sbjct: 1960 AEIFNAIFQLDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHNSGIINQNTNASFIV 2019
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
L+PKK ++ I DFRPISL+T LYKIIAKVL+ RL+ VL +TI Q AFV GRQILD++
Sbjct: 2020 LLPKKSQSKKISDFRPISLITCLYKIIAKVLSGRLRGVLQETIHSTQGAFVQGRQILDAV 2079
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGF--------------- 494
L+ANE V+E + + ++ V+ K+D EKAYD V+W+FLD VLE KGF
Sbjct: 2080 LIANEIVDEKKRSGEEGVVFKIDFEKAYDHVNWDFLDHVLEMKGFSPRWRSWMRGCLSSV 2139
Query: 495 ----------------------GDAISCSIHYCI------------ERRIIKELSMGKDH 554
GD +S + + ER +++ +G++
Sbjct: 2140 SYAILVNGNAKGWVKAVRGLRQGDPLSPFLFTIVADVLSRMLLKVEERNLLEGFRVGRNR 2199
Query: 555 VEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEGDGLSLNRAKTSIIGINMHMDIIRE 614
V+ LQFADDT++F E + +L++ + GL +N K+++ GIN+ + +
Sbjct: 2200 CRVSHLQFADDTILFASPREDEVQTLKSLLLVFGQISGLKVNLDKSNLFGINLDQNHLSR 2259
Query: 615 RAEKMGCRFENFPINYLGFPLGGE-----LW----------------------------- 674
A + C+ ++PI YLG PLGG W
Sbjct: 2260 LASLLDCKASDWPILYLGLPLGGNPTACGFWDPVIERISRRLDGWQKAYLSFGGRITLLH 2319
Query: 675 ----------------LASTALK--------LWVGT---QGFCLR--KEVADFGLILKET 734
AS A K LW G G +R +++ ILK+
Sbjct: 2320 SCLSHIPSYFLSLFKIPASVAAKIERLQRDFLWSGVGEGDGERIRFWEDLWWGDQILKDQ 2379
Query: 735 FPNSTNLLSFRKNASISECWNNNHQ-TWDLGLRRGLFYRESGSWEALVEILNEVQLG-SG 794
+P ++ KN IS ++ +W+ RR L E E L+ L+ + L S
Sbjct: 2380 YPRLFRVV-MDKNIPISSILGSSRPFSWNFNFRRNLTDSEIEDLERLMHSLDCLNLSTSA 2439
Query: 795 VDKLIWTLEGSGCYTTKSMFQRCVGRSSKVNMPIVELIWEHNCPNKVKVFLWSVIYRSLN 843
D W+L +G +T KS F + +W+ KVK +W V ++ +N
Sbjct: 2440 SDARSWSLCSTGLFTVKSFFTALSQMPDSSPFFPTKFVWKSQVLFKVKTSIWLVAHKKVN 2499
BLAST of Lcy12g000220 vs. NCBI nr
Match:
RVW93866.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 534.3 bits (1375), Expect = 1.9e-147
Identity = 319/988 (32.29%), Postives = 485/988 (49.09%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E++ S SMR F+ FIS C+L+D P+ N FTWS M + RL++
Sbjct: 139 GDFNVIRRSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSNMQESPVCKRLDR 198
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W +F + L R TSDH+PI + WGP+PFRFENMWL++ +F++N
Sbjct: 199 FLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTPFRFENMWLQHTNFKENFR 258
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW+G GW G++FM++L+ +K+ ++ W K FG L +KK +IL + + D++E++G
Sbjct: 259 DWWSGFQGIGWEGYKFMRRLQYVKAKLKEWIKSSFGELKEKKKSILNDLANFDAIEQEGG 318
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ P+ I +R S + L E+ + ++ QK K++W+K+GD N+ F+H+ + + + YI
Sbjct: 319 LNPDLISQRVSRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVTNGRRNRKYIK 378
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E G L + I EEI+ ++ KLYT + ++ + W P+ + S + LE PF E
Sbjct: 379 ELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLESPFTE 438
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EEI +AI L K+ GP+G T F+ W+++K DLV VF EF ++GIIN TN +I
Sbjct: 439 EEISKAIFQLDRDKALGPDGFTIAIFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFII 498
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
LIPKK + I DFRPISL+TSLYKII KVL+ RL+ VL +TI Q AFV GRQILD++
Sbjct: 499 LIPKKSLSKRISDFRPISLITSLYKIIVKVLSGRLRGVLHETIHYTQGAFVQGRQILDAV 558
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKVSWEFLDVVLEFKGF--------------- 494
L+ANE V+E R + ++ V+ K+D EKAYD V W+FLD VLE KGF
Sbjct: 559 LIANEIVDERRRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSV 618
Query: 495 ----------------------------------GDAISCSIHYCIERRIIKELSMGKDH 554
D +S + ER +++ +G++
Sbjct: 619 SFAILVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSKMLMRAEERNMLEGFRVGRNR 678
Query: 555 VEVAILQFADDTMIFCPNEEAIMDNWWEVLIMILEGDGLSLNRAKTSIIGINMHMDIIRE 614
V+ LQFADDT+ F + E + +L++ GL +N K+SI GIN+ +
Sbjct: 679 TRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIYGINLDQAHLSR 738
Query: 615 RAEKMGCRFENFPINYLGFPLGGE-----LW----------------------------- 674
AE + C+ +PI YLG PLGG W
Sbjct: 739 LAEMLDCKASGWPILYLGLPLGGNPKACGFWDPVVERISSRLDGWQKAYLSFEGRITLIQ 798
Query: 675 ----------------LASTALK--------LWVG-------------------TQGF-- 734
A+ A K LW G T G
Sbjct: 799 SCLTHLPSYFLSLFKMPATVAAKIERLQRDFLWSGVGEGKRDHLVRWDIVYRPKTIGVRW 858
Query: 735 ---CLRKEVA----DFGLILKETFPNSTNLLSFR----------------------KNAS 794
C K +A +F LI + N + + KN S
Sbjct: 859 SHRCPWKAIAQVFQEFSLITRYVVGNGDRIRFWEDLWRGDQSLGTQYPRLFRVVVDKNIS 918
Query: 795 ISECWNNNHQ-TWDLGLRRGLFYRESGSWEALVEILNEVQLGSGV-DKLIWTLEGSGCYT 843
IS + W+L RR L E E L+ L+++ L V D +W L SG ++
Sbjct: 919 ISSVLGPSRPFLWNLNFRRNLSDSEIEDLEGLMRSLDDLYLSPSVPDARLWPLSSSGLFS 978
BLAST of Lcy12g000220 vs. NCBI nr
Match:
RVW20049.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 532.7 bits (1371), Expect = 5.7e-147
Identity = 313/986 (31.74%), Postives = 480/986 (48.68%), Query Frame = 0
Query: 15 GDFNVVRWVDERLHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWSRMGDRGAASRLNK 74
GDFNV+R E+L SR M+ F++FI C+LID P+ + +TWS M + RL++
Sbjct: 889 GDFNVIRRSSEKLGGSRLTPCMKDFDEFIRDCELIDSPLRSVSYTWSNMQENPVCKRLDR 948
Query: 75 MIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAMKWGPSPFRFENMWLENPDFRKNMD 134
+ + +W +VF + L R TSDH+PI L KWGP+PFRFENMWL++ F++N
Sbjct: 949 FLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFG 1008
Query: 135 IWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDSLEEQGV 194
WW+ NGW G +FM+KL+ +K+ ++ WNK FG L+ KK +IL + + DSLE++G
Sbjct: 1009 RWWSEFQGNGWEGHKFMRKLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGG 1068
Query: 195 IQPEDIEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWASAMKRKAYIA 254
+ E + +R + L E+ + ++ QK +++W+K+GD N+ FFH+ A+ + + +I
Sbjct: 1069 LSQELLVQRAFSKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIK 1128
Query: 255 AIDSEDGRFLSSEAEIEEEIIQFYTKLYTKDDIPRFVIDNISWVPLDDHSNVLLEEPFKE 314
+++E G L++ I+EEI++++ KLY + ++ + W P+D S LE PF E
Sbjct: 1129 ELENESGLMLNNPESIKEEILKYFEKLYACPSRESWRVEGLDWSPIDGESASRLESPFIE 1188
Query: 315 EEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHEFFKNGIINTKTNEKYIC 374
EEI++AI + K+PGP+G T F++ W+++K DLV VF EF ++GIIN TN +I
Sbjct: 1189 EEIYKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGIINQSTNASFIV 1248
Query: 375 LIPKKKKASNIKDFRPISLVTSLYKIIAKVLAERLKKVLPKTISDCQAAFVHGRQILDSI 434
L+PKK + I DFRPISL+TSLYKIIAKVLA RL+ VL +TI Q AFV GRQILD++
Sbjct: 1249 LLPKKSISRRISDFRPISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQILDAV 1308
Query: 435 LVANETVEEYRANKKKRVLLKLDLEKAYDKV--------SWEFLDVVLE---------FK 494
L+ANE V+E R ++ V+ K+D EKAYD V W L F
Sbjct: 1309 LIANEIVDEKRRTGEEGVVFKIDFEKAYDHVILVNGNAKGWVKASRGLRQGDPLSPFLFT 1368
Query: 495 GFGDAISCSIHYCIERRIIKELSMGKDHVEVAILQFADDTMIFCPNEEAIMDNWWEVLIM 554
D +S + ER +++ +G++ V+ LQFADDT+ F E + VL++
Sbjct: 1369 IVADVLSRMLLKAEERNVLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLV 1428
Query: 555 ILEGDGLSLNRAKTSIIGINMHMDIIRERAEKMGCRFENFPINYLGFPLGGE-----LW- 614
GL +N K++I GIN+ + + A + C+ +PI YLG PLGG W
Sbjct: 1429 FGHISGLKVNLDKSNIFGINLEQNHLSRLAVMLDCKASGWPILYLGLPLGGNPKASGFWD 1488
Query: 615 --------------------------------------------LASTALK--------L 674
AS A K L
Sbjct: 1489 PVIERISRRLDGWQKAYLSFGGRISLIQSCLTHMPCYFLSLFRIPASVAAKIERMQREFL 1548
Query: 675 WVGTQGFCLRKEVADFGLILKE------------------------TFPNSTNLLSFR-- 734
W G G R + ++ ++ K +P L R
Sbjct: 1549 WSGV-GEGKRDHLVNWDVVCKPKSRGGLGFGKISMRNVALLGKWLWRYPRRVQLYGIRWS 1608
Query: 735 -------------------------------------------------------KNASI 794
KNA I
Sbjct: 1609 HRCPWKAIALVFQEFSKFTRFVVGDGDRIRFWDDLWWGDQPLGTQYPRLLSVVTDKNALI 1668
Query: 795 SECWNNNHQ-TWDLGLRRGLFYRESGSWEALVEILNEVQLGSGV-DKLIWTLEGSGCYTT 843
S + +W+ RR L E E+L+ L+ + + V DK W++ SG +T
Sbjct: 1669 SSILGYSRPFSWNFNFRRNLTDSEIEDLESLMRSLDRLHISPSVPDKRSWSISPSGLFTV 1728
BLAST of Lcy12g000220 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 157.5 bits (397), Expect = 4.6e-38
Identity = 114/404 (28.22%), Postives = 182/404 (45.05%), Query Frame = 0
Query: 14 VGDFNVVRWVDER---LHMSRPNRSMRKFNQFISLCDLIDIPMANGKFTWS-RMGDRGAA 73
VGDF+ + + L S P R + +F + DL+DIP +TWS D
Sbjct: 224 VGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPII 283
Query: 74 SRLNKMIITKDWAEVFKEFNLVRLQRPTSDHFPIALSIGAM-KWGPSPFRFENMWLENPD 133
+L++ I DW F V SDH P + + + K FR+ + +P
Sbjct: 284 RKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPT 343
Query: 134 FRKNMDIWWNGQNPNGWAGFRFMKKLKGLKSYIRSWNKDVFGNLNDKKSNILQRIDHLDS 193
F ++ + W Q P G F + LK K + N+ FGN+ K + +D L+S
Sbjct: 344 FLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTK---EALDSLES 403
Query: 194 LEEQGVIQPED----IEERRSLRASLMEITVNDQRRLNQKCKLRWMKDGDENTSFFHRWA 253
++ Q + P D +E + + + R QK +++W++DGD NT FFH+
Sbjct: 404 IQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYR--QKSRIKWLQDGDANTRFFHKVI 463
Query: 254 SAMKRKAYIAAIDSEDGRFLSSEAEIEEEIIQFYTKL-------YTKDDIPRFVIDNISW 313
A + K I + +D + + +++E I+ +YT L T D + R I +I
Sbjct: 464 LANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQR--IKDIHP 523
Query: 314 VPLDDHSNVLLEEPFKEEEIFRAIQALGNQKSPGPNGMTGEFFKNFWNILKHDLVEVFHE 373
+D L ++EI A+ A+ K+PGP+ T EFF W ++K + E
Sbjct: 524 FRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKE 583
Query: 374 FFKNGIINTKTNEKYICLIPKKKKASNIKDFRPISLVTSLYKII 402
FF+ G + + N I LIPK + FRP+S T +YKII
Sbjct: 584 FFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620
BLAST of Lcy12g000220 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 61.2 bits (147), Expect = 4.5e-09
Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 0
Query: 405 LAERLKKVLPKTISDCQAAFVHGRQILDSILVANETVEEYRANK--KKRVLLKLDLEKAY 464
+ ERLK ++ I QA+F+ GR D+I+ E V R K K +LLKLDLEKAY
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 465 DKVSWEFLDVVLEFKGF 480
D++ W++L+ L GF
Sbjct: 61 DRIRWDYLEDTLISAGF 77
BLAST of Lcy12g000220 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 57.8 bits (138), Expect = 5.0e-08
Identity = 49/187 (26.20%), Postives = 73/187 (39.04%), Query Frame = 0
Query: 682 DKLIWTLEGSGCYTTKSMFQRCVGRSSKVNMPIVE----------LIWEHNCPNKVKVFL 741
DK+IW +G YT +S + + N+P + IW K+K FL
Sbjct: 117 DKIIWNYNTTGEYTVRSGYW-LLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFL 176
Query: 742 WSVIYRSLNADEQLQRKFKSWSLSPSVCRMCFNEEENIDHILIHCNFAKKAW-------- 801
W + ++L E+L + + PS C C E E+I+H L C FA AW
Sbjct: 177 WRALSQALATTERLTT--RGMRIDPS-CPRCHRENESINHALFTCPFATMAWRLSDSSLI 236
Query: 802 -------DFIANLQGI-SFCLPKRVDDWLNKGLIAWNLKKKAKVIAGCAFRSTMWLLWKE 843
DF N+ I +F + D+ +K L W +W +WK
Sbjct: 237 RNQLMSNDFEENISNILNFVQDTTMSDF-HKLLPVW----------------LIWRIWKA 282
BLAST of Lcy12g000220 vs. TAIR 10
Match:
AT1G45063.1 (copper ion binding;electron carriers )
HSP 1 Score: 47.0 bits (110), Expect = 8.8e-05
Identity = 25/93 (26.88%), Postives = 46/93 (49.46%), Query Frame = 0
Query: 748 KFKSWSLS-PSVCRMCFNEEENIDHILIHCNFAKKAWDFIANLQGISFCLPKRVDDWLNK 807
+F SW + PS+C +C +E H+ C F+ + W F + ++ P R+ +
Sbjct: 272 RFISWGIQVPSLCLLCNALDETRQHVFFDCPFSHEVWSFFCSNARVT---PPRMFKDSAR 331
Query: 808 GLIAWNLKKKAKVIAGCAFRSTMWLLWKERNAR 840
L KK I A++++++ +W+ERN R
Sbjct: 332 WLRHPCRDKKVAFILKLAYQASVYHIWRERNIR 361
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P14381 | 5.2e-34 | 26.76 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
| O00370 | 1.3e-24 | 21.24 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
| P11369 | 1.2e-22 | 25.98 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
| P08548 | 2.9e-21 | 24.64 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
| Q03274 | 9.5e-04 | 24.14 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A5BCI7 | 3.7e-152 | 31.32 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
| A0A438GDE7 | 1.4e-151 | 31.12 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_... | [more] |
| A5C3T9 | 7.2e-148 | 32.38 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000598 PE=4 SV=1 | [more] |
| A0A438IAX3 | 9.4e-148 | 32.29 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
| A0A438CA35 | 2.7e-147 | 31.74 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| CAN65484.1 | 7.6e-152 | 31.32 | hypothetical protein VITISV_029474 [Vitis vinifera] | [more] |
| RVW70235.1 | 2.9e-151 | 31.12 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
| CAN66330.1 | 1.5e-147 | 32.38 | hypothetical protein VITISV_000598 [Vitis vinifera] | [more] |
| RVW93866.1 | 1.9e-147 | 32.29 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
| RVW20049.1 | 5.7e-147 | 31.74 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
