Lcy11g020300 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g020300
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Mediator of RNA polymerase II transcription subunit 10
Location	Chr11: 47960769 .. 47970352 (+)
RNA-Seq Expression	Lcy11g020300
Synteny	Lcy11g020300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCGTTAAAGCCCCAATTAGACCCTTCAAATAATTTCTCCGTCTCGAAAGTCGAAACTCTTTAGATTCAAAGTTTCAGGCTTTCACCATTAATATTCATCGCGCTCGCAGCCCTAGTCCCATCGATCTCCTCCTCACTCCTTCGAACAAGTAAGATTGAAGTACTATGTTCTCTTGATTTTCAATTCTTTGATTCTCTCGCCTTCTTGTAGTCCGGTTTTTGATCGATGCTGGGAATTGTTGCTCTTCGGTCCATGATTTCTGCAATTCTAATTTGTGGGGGTCGTTTTTATTTGCCTTTGATTTCGGGGAAGCTGTTTGTTTGACTCAACTATTTGGTTTATCGCGATTGATTTTCTTTTTTATTTTTGTTTGATTATCATTCATTTTGGGATATTCAAGTTCGAGCTTGTTATGATTTTTGCTGTGATTTGTGGGACTTTCATACCAGTCGGAGGACTTGTTTTTTTTAGGGTTCGCATACTTCGACTTTCTCAGTGGCCCTCTGCGGGTCTGAAGATAGTAATATCATGATAAACGTATTTGCAACTGCCCTCCAAATGGGGAAATCTTCAGTAGATCTAAAATTTTGATATGTTTTTAGAGAAAAGCAAGACAGAAGGCTGATATAGTAATATTGCGAAAATTTGAAATGAACTTGTGTCAGTTGGGAGATTTATTGAGTCTTTGTAGTTCTCACCAACTAAAATTGATAATAACAACCAAACAGTAGCCATATAATGTAGTACTTAACAACTCTTCTGTATTGAATTGTTCCAAATATGGATTTCAGAGCTCCAAGGTATTTAGGAAGTGAAAAGAAGATAATGGATTCAACTCAGAATGCATCTTCAGCTGCTGGGACCGGTGGAAGTGGTGGCAATGGATCGGTCATCAATGATACGTCTGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGCATCCTCCATCAGCTCAACCTCACCGTCACCAACTTCAATGCCGCCTATCAGCTGCCGCTTTTACAACGCATGTACGCTCAGTTTTGCTTTGTCTAATATCTACTTCGTTCTTTATTCCCTCCTTATTCCACTCTATACCAGTGATATTCTTCTCGATTTTACAGTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAGTTATCAGAGAAATGCACCATCCAGGTCCCCATGGAGGTTGTTAAGTGAGTCTTTGTGCACCCTTTCTGATCTCTAGCCTTGCAAACTTTTTTTTTCCTGACATTTCAATTTTTTCTTGGTCTACTTCTTACTTTTCTTTTGATTAGTTTGATCGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGTAGTCTTTACATGGAGATGTAGCAGGCTGTTAAAAATCTACTTACCTCTTATTTGTATCTTGATTTCCAAAGATTTACAAAAATCTTTATTGAATGTTGTACTACTTACTATATTCAGGGTTTACGGAAGCATCTTTTGGAAGAACTTGAACAGACATTTCCTGATGAAGTAGAGTCTTACAGAGAAATTCGTGCTGCTTCTGCTGCCGTGAGTTAAAATTTCTTTCCTGTGGTCAATTTTATCTCTTTCTTCAAGTTTTGCTCAAAATTATTGGATGTGTGTGTTTATTAATTTTCAAGCTTATCAAAAATATTTTCTTGGTTCTTATGGATTAATTTGTACTTTATCTATAACCATAATTTCCATGTTTTCTCGAAGTCTGCATCATCCTTTCTAGCATTTCATGGCTATTTATATATTTTTGGTGGTTTTAGATATCAAACTTCAGAAATGTACAAAAATGTAAATATGTAAGCTATGTTTTGGTGTAAGTTCTAGGTATAGTCGAATGTCCATTGCTTTAATTATATGTTAAGTTATAAAGACTCACTTTAGACTTTCCTAGTCATAGGAGTCTTTAATATAAGATATTGGACAAATTCTATTCTGTTATTTTGAGTTTGGTTGCAGGTAATAGTTGCTTCATTGTATAGTTTCTATTGGTTTTCTTTTATTGTATGAAAATGTGAGGAAACAAGTAGCATTTTTGTTTTGTGATTCATAGGATGGTTGAATTCTGTTTGCTTGAAAAACTACTTTTTGGTTATTTTATAAACATCTCTCAAGCCAATTTTACCTCGCAATTTTCTCCTTTGTGATTGAAGGAGTTTAATGTCTTTAGACACCCCTTTTTGTAATCCTTCCTTTGGGAGAGGGGATGCCTTATCCTTTGTTCCTTAGGTTGTTTTGTTTGGTTTTTTTGCCTCTTTGACTGAAGTGCTCTCGTTTCTTTAAAAAAAAAGAGTTTAATTTATCTAGAATCAGATTAAACTACTTTAGCTCCTTGTTTGTTGAACAGGGTTTTGTGATTAGCTTATGTGAAATAAAGAACTTGTAATACTTCCTGCCTTAAATTCTGTAACCATCCTTCCAGTTTTGGCGCAAGGTTGATGGTATTTTCAAAAACCATAAAATTGATCAGTGATCACAGCCTTGCTTATTCCAATTGGTGTCTGTCTGTATATATGCTCCTACTACCGTCCTCTTGACCAGTACTAAATCTTTTGTGATATCAAGGTTTGTCTATCGCATGGTCAAGTGGAAATTAGGGTACTGGAGTTTTTTGTACTTGCTGGCTGTTTTAAGTTTCACAAATTACAATTCTTGCCAGTACCTTAAGCTTAGTGATTACTATATGTGGCATTGTGTCACGGGGTAATTTCGATCACAAAATTTTTACCCACGTGTGGCCTAAGGTGCTCCCTTAGTAGTTAGTACAACCTCATACTATCCCTGTAGTTCTTTTCTTAGGTTAGTTGCGGAAATAAACACTCTTCACCACTTCCACTTTGGTCATGACTCGCACATCGTGTCGCTCACAAGATCTCAACACTTGCTCTCTCAAGTGTCATGTCACTTCGTGTGCACATACACATATCACGAGCACATAAGCCATGTAGTAGAGTTGCAAAGCCAACATACGGGAAAACTCACTCCCAACCTTCTTCATTTACACACATGAATAAGGAATATATGTTACAACCTTCTTCATTTACACACATGGATAAGGAATATATGTTACAACCTAATGGCATATGTACCCAAGCACTACAAAATTGACACACCCAAGGCAAGAGTTCTCCCAATATCTCTTCCTCACACCAAGACTCACTCTTGAATCAAGGTTTATGGAATTCTCATCATGGGGAGTCGATTTTTTCCTTTGTGTGGAAGGTGAAAGTGCCGAATAAGATTAGGTTATTTATTTGGCAAGTTATCCATGGTAAAGTAAATACTTTCAATAGGCTCTTGAGAAGTATGCCCTCGCTGGTGGGCCCGTTATATTGTATTCTTTGTCGGAAGGCGGAGAAAAATCTGGATCACATTCTTCGTGCTTGTGACTATGCTTACATGGTGTGGGATTTGTTCTATGATGCTTTTGGGATGCAGTCGCAGAGTTATCTGAATGTTAGGGAGATGATCGAGGAGTTCCTCTTCCATCTGCCTTTTTGCGAGAAGGGGAGATTCTTGTGGCAAGCTGGGCTGTGTGCTTTGTTATGGTTCTTATGGGGGGAAAGAAATAATAGTGTTTAGGGGGTTGGAGATAGACCCAAGGGATGCATGGTCACTCGCTAGATTCCATGTGTCCCTTTGGGCTTCGGTGTCGAAACTTTTTTGTAATTATCCGTTAGGCATCATTTTACTTGATTGGGGTCCTTTCCTTTAATTGGATCCTTTTTTTTTGTGGGCTTGTTTTTTTGTATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCTAGTTCTTTATTAAAAAAAATAGAATTCCCACATAGAATCCATAATCAAGACCTCATTTGAATCCTCTCTGGAAGACTCCTCACAAGTCACTTTAAAGACTCTTAAAAGACTATCCCAAAGACCTCATGAAGAGACCTGCCAAAGGCCTCTTGAAAAGACCAACCTAAGGCCTCTTGCACAACTCTTGCAAGCTTGCCTTTATATAGACAAAGGGAATGGTAGAATTGCAATTAAAGAGAAGTTGTGGATAAGGATGCCCATTTGAATTTCATTCTTATCCAAACTCATACTTATCCAATATTTGAATTCATACCTTTGAATTCAAATCCCAAGAGTTACCATCTTGCTTCTAGGATCGCCAAGTGTCAAGCATGCATTTTTGTATGTCAATATGTTGCCAAGTGTCCACCATGTGTCTTCCATGCAAAATGCTCTTCTAAATGCTTGCCACGTGTCCCATCAATGGATAAATCCTTTCCCAAGTGCTTCCACGCAAATCGGGTTAGTAATCGCCAACTTGGTCAGTTATGGTCCTCCAATGGACTTGTCATAAACGTGTACCACTTGTTCTTCTCTCGAACTTGGACCTGTGGGTAATGAGCACCAACCCACTTTTTGGCTTCTTTCCTCTGATTTTTGCGGTGGGTCTTCTTCATTTGGACGATTTCTTAGATATTCAGTCGTGGGTTGCAAAACTTCGGTATCCTTCTGTTATTTCCAACTTTAATATCCTTAAGATTGCTTGGTTCATTGTTTTATTTTACCTTACGAAAATTTTCGCCTTCTTTCTGACGGTAGAAGTGTGTGGCCTAAGAGATCCTCTTAGTACAACAATTTATTTTTTTGCCTTCTTTCTGATTGTCGTGGGTTGCAAAACTTTGGTATCCTTCCCTTATTTCCAACTTTAATCCTTAAGATTGCTTGGTTCATTGTTGTATTTTACCTTACGAAAATTTTTGCCTTCCTTCTAACGGTAGAAGTGTGCGGTCTAAGAGATCCTCTTAGTACAACCTTTTATTTTTCCCCTCAGTCCCACAAAATGCACATAAGAATGGTCAAGAACATATACCAAGGATGCTAACTCGTTGTAGCTTTGATGGACGAACTGCTCAATGCAAGATATGTTCGAGAAATGTCCTCAACTTCTCTTTTATTGCGTAAGGTAAAATACAAAATGAACTCCCTCACTTTGTACAATTTCACTCTCACCCAAAATTGTGTCTTTCCCAAATGAAAAGACTCCCTCCCTTTTATAAGAAGAGATGTGGATGTTGGTGTCCAAGTTATTATCCACACATCCATCTCCAAATCTACCCAATTGGAGACAAATGTCCTCCGAGTGGTGGCTCTCCAATCATGGCCTTTAACTCCTTTAAAGGGTGGCTTCCTCTTCAATCTTCATCATCTTTGAAGTTGCAAGACATCTCTCATGGATTGAGACTCATTTTGTGGGTAGATCGTAGAAGAACTCCTGCAGCCTCCTGCTCATGCTCCTGCTCCTGCTCAGGTATATCAGGGAGGTCCTCGTTCAACCAATTGTCGGCCTGTCTCAAGGCCTTTCATACTTCACGTGGCGGGTACATCAGATGCTCTTCAACGCTTGTCTTGATTTCGTTGATCTCTTCACTCAACAGGTGGAGATCGTGACGAAGGGTGTCGAGCCCGATTCTCGCAGTCTGCTGTAGATCCAGCATAGTTTGATTCGCTATGAGGATATAGCTTTGGACGTTATCGATGAGTGCCCTTACCAAGTTCTCCATGTTTGCTATGCAGTCGTGGTACTCCTGGATCACGTCCGTGATTACTGGTTCCAATGTTGGGAAGTCCTCCTAATCTGAACTTAGAAGCTTGTTCTTGAACGTCCCTAGTTCAACGCCATGACGTTCTTCGAGTCTTCGCACTCTCGCTCGGTGTGCATATTTTGCCATGTTCAACACCTGTGGAACTTTGCAACGGAAGTCTGGTGGTATCAGAGTCAGGTTAGCATCAAGCAAACCGGGTCTCTTTCCCAATAGACTTCCAAATATGCACACCGAGCGAGAGTGCAAAGACTTGAAGAACGTCTTGGCGTTGAACAAGGGACGTTCAGGAACGAGCTCCTGAGTCCAGATTAGGGGGACTTCCCAGCACTGGAGCCAGCGATCACTGACGTGATCCAGGAGTACCACGACCGCATAGCAAACATGGAGAACTCGGTAAGGGTACTCACTGATAATGTCCAAAGCTATATCCTCGCAGTGAGAATTGGGCTTGACGCCCTTCGTCACAATCTCCACCAGTTGAGTGAAGAGACCAACGAAATTAAGACGGGCGTTGAAGAGCATCTGATGTACCTGCCATGTGAAGTTCGAGAGGCCTCGAGACAGATCGACGATTGGTTGAACGGGGACCTCCCCGATATACTTGAGGAGGAGGCTGCTGGAGTCTACCCACAAAATGAGTTCCAATCCATGAAAGATGTCTTACAACTTCAAAGATGATGAAGATTGAAGAGGAAGCCACCCTTTAAGGGAGTTAAAAGCCCGTGGGTTCCCTTCATTTCAACCAAGCACATGGAGAGCCATCACTTGGAGGACATTTGTCTCCTATTGGGTAGATTGGAGATGGATGTGTGGGTAATAACTTGGGCACCAACATCCACATCTCTTCTTATAAAAAGGGAGGGAGTCTTTTCATTTGGGAAAGACAATTTTGGGTGAGAGAAATTGTACAAAGTGAGGGAGTTTAGGTGAGAGACAATTTTTACCTTGCAATAAAAGAGAAGCCGAGGACATTTCTCAAACATATCTTGCATTGAGCCGTTCGTCCATCAAAGCTACAACAAGTTAGCATCCTTGGTGTATGTTCTTGACCATTCTTATGTGCATTCTGTGGAACTGAGGGGAAAAATAAAAGGCGGTACTAAGAGGATCTCTTAGGCACTTCTAACTTCAGAGAGAAGGCGAAAATTTCTGACTAATTTTTAGACGCGTGACACATTGCTCCTTGTAAGTGAATTATATAACTTACATTGTATAAAGACATTAGAATGAGCATGAGTCCTGTCATCAAGTTGGCTTTCAATTTTTCACCATGGTTATTGAGCAGCCTTAGTAGATAGTTTTACCTATACTTTTTATATAATTTATTTATTTCATATTTTATAAAGAGTGCCCGAGTGACTAAGGCGATGCATTTTTGTCACCTCTCATCTTGAGGCAATTATGAAACCTCTCATCTTTAAGGTGAGACAATTACAAAACTTGTCATCTTAAGGTGCGTCTTCACTAAACACTGGTTCTTTCCAGGCTCGTGTGTACCATCCAAGATATTTGAAAAGTGCAACCCAAAATTTGATTTGTGCAACACCCAACCACAAAAACTATTCCTAACTGTAAATTTGCACTATTCGTGGATCCACCTCACCTTTCCACTCCATCTCCTAGCACTACCACTCCTTCCCTCGATGTTTTTGTTGTCAGAATCTTCAAAATTATCAGTTGTGAGGACTCTAGCCTCATTTGAAGAGAGAAAACAAGCTTGAGTGTTGCTAGGATTCTCTAGAAAGGTGCTAAAACTTTGATTTCCATCCGTAAATGCAAGTCCCAAAACGGAATCATATGATTTTTTTGCAACTTTTTGTCTATTTTTGTCAATTGATTGACTCACTCCATCACATTCCCTACCTCGTAGCCCTTGCCCATTTGTGTATTTGTTTCCGACCAATTAGCATCCAAACTTTCTCGTGCCACCATTGTCAGATGATTTTGGTCTCTGTGGCATTGGTCTGTATTGTATTGGCTTGATCTGTGTGGTTCTTTTGCCTATACATTTGATCAATTTTTTCCTGTTTTCCAGATCCTTTCCTGAGATCGAATGGCTCGGATATCAATTTGATTAGAACCCAATCTTGAGATTGCAAAGAAAATGGGAGATAAAACTGGATTGTTATATTAAAGTATGTGGGTAATAACCATTTGAGACGACTATTCCTCTCCTTCAACCTGTACTAACCAACTCATCATCTTGTCGTTTTGTGATCCTGCTTTGGACAGCCCATGGCATGTATGAGTTGGGAAAGCCAAAAACTTCTACTTTTGTTAAACAGCTATGTTGTGAGATCTTTTGACTAGTGAATCAATTATAACGAGAAAATACATAAGGGATATATACCATAGAGAAAACTCTTGATTTTGATTTTTTTTTTTTAACTTTCACGTTATTCATCAAGTTCGCCATAGAAATACACTGTTTATTATGTTTCCTGTCATTGGACTCAAATTTTAATCTTGTTGAAACAAATGCAGGAAGCAAAAAGGATAGCGCAAGCACAGAGTATGTTACCAAATGGGGATATGAAGGTTAAGATGGAGGTTTAAGTGCCTTCTGCGTTGATTATCAGGTCTTTGAAGTTCTTCGCTTACGATTATTCTTTATTATGTCTTCAGCAGCATATAATTATATTGATTAGCCATCATATATCACATGATTTTAGTCTCATTCAAGGGATTGATAATAGAATAACATCATCCTTCTTAATTCTTAGTTATTAAGAAAAAAAAGAAAGAAAGAATAACGTAATCCTCTATTTTTATTACCGTCTGTAACCTTGCTCTGGTGTGTTTTAGTACTTTTGGAATTGCAAGTCATGATACAGATGACTTCTACTTGATATATTGTTTAAACATAAGTTCGATATTGAATCAGCTAGTCTAATGGCCTCTTTTTGATGTTCTTTCTCAAAGTTTTTTTTATTGTCTTCTCTTAGGATTTTTCTATGATTTGGAATGCTTTTATTTATCCCATGTAATTTATTTTGGTTGGTCCTTATGCTTTTTATTGTTTCTCTTCTGTTTGATTCTTTAGTGGAGTTTGTATCATTTGAGCATTAGTCTTTCTCATTTCATCAATGAAAAGTTTCGTATCTTGTTAGAATAAAACATAAGTTTGATATAGTTGCCAACCTGAGCCTAGTCTCTCTCTCTCTCCATTCAACAACATGTGGGGTGGGAGATTTAAACCTCTTGATCGAGGGTATTGCCTTAACTAGTTAAGCTATGCTCAAGTTGGCAACCGGAACATAGATTAACCAGCCAATTGGTTAAGGGATTACACATCTTTTCTAAAAGCCAAATATTTGAATATCTAACCTCTGGTTGAAAAAAAAAACCCGAGATGCTTCGAATTCATTCTTATTTTATACTCAATTAAGTTGAAAATATCCTTTCAAGAACGAATTTTCTTGCTCAAAAATAGGTGAGGTGGCTGTATCTTGGTTTCTCCACTCAAGGCTGTGCGGGTGACAACGTGGGATTGGATGGCGGCTAATGAATTAATACTCTGCAAAAACCACACAAGATGAAACACTTTCTGGTACTATATCGTATTCGTATTCATTGAGCCAATCAAGATGGAGAAGAATGACAAACCCCAAACGTTGAACTTTGGATTTTACTGGCAGTGACAACCCATCCAGTGTGTCTGATTCAAGTTTAATTTTGTTGTTTTTACTTGGTACATCTCACTATTCTGTGAATAAGTATTGTAAGTTCATATACAATTCCTTGCCTCAACTCTTTGAATTTTGACTAATGAATTTCATCTTTATCCATGGGTGCTATTTCCCAAGTGATGTATATCTATGTATTCATATTTGTGCAAATGACAGACTATGTTCGATTGGGTTTTTAGCATGTTTAGAAACACCTTTACCA

mRNA sequence

CAGCGTTAAAGCCCCAATTAGACCCTTCAAATAATTTCTCCGTCTCGAAAGTCGAAACTCTTTAGATTCAAAGTTTCAGGCTTTCACCATTAATATTCATCGCGCTCGCAGCCCTAGTCCCATCGATCTCCTCCTCACTCCTTCGAACAAAGCTCCAAGGTATTTAGGAAGTGAAAAGAAGATAATGGATTCAACTCAGAATGCATCTTCAGCTGCTGGGACCGGTGGAAGTGGTGGCAATGGATCGGTCATCAATGATACGTCTGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGCATCCTCCATCAGCTCAACCTCACCGTCACCAACTTCAATGCCGCCTATCAGCTGCCGCTTTTACAACGCATTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAGTTATCAGAGAAATGCACCATCCAGGTCCCCATGGAGGTTGTTAATTTGATCGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGGTTTACGGAAGCATCTTTTGGAAGAACTTGAACAGACATTTCCTGATGAAGTAGAGTCTTACAGAGAAATTCGTGCTGCTTCTGCTGCCGAAGCAAAAAGGATAGCGCAAGCACAGAGTATGTTACCAAATGGGGATATGAAGGTTAAGATGGAGGTTTAAGTGCCTTCTGCGTTGATTATCAGGTGAGGTGGCTGTATCTTGGTTTCTCCACTCAAGGCTGTGCGGGTGACAACGTGGGATTGGATGGCGGCTAATGAATTAATACTCTGCAAAAACCACACAAGATGAAACACTTTCTGGTACTATATCGTATTCGTATTCATTGAGCCAATCAAGATGGAGAAGAATGACAAACCCCAAACGTTGAACTTTGGATTTTACTGGCAGTGACAACCCATCCAGTGTGTCTGATTCAAGTTTAATTTTGTTGTTTTTACTTGGTACATCTCACTATTCTGTGAATAAGTATTGTAAGTTCATATACAATTCCTTGCCTCAACTCTTTGAATTTTGACTAATGAATTTCATCTTTATCCATGGGTGCTATTTCCCAAGTGATGTATATCTATGTATTCATATTTGTGCAAATGACAGACTATGTTCGATTGGGTTTTTAGCATGTTTAGAAACACCTTTACCA

Coding sequence (CDS)

ATGGATTCAACTCAGAATGCATCTTCAGCTGCTGGGACCGGTGGAAGTGGTGGCAATGGATCGGTCATCAATGATACGTCTGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGCATCCTCCATCAGCTCAACCTCACCGTCACCAACTTCAATGCCGCCTATCAGCTGCCGCTTTTACAACGCATTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAGTTATCAGAGAAATGCACCATCCAGGTCCCCATGGAGGTTGTTAATTTGATCGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGGTTTACGGAAGCATCTTTTGGAAGAACTTGAACAGACATTTCCTGATGAAGTAGAGTCTTACAGAGAAATTCGTGCTGCTTCTGCTGCCGAAGCAAAAAGGATAGCGCAAGCACAGAGTATGTTACCAAATGGGGATATGAAGGTTAAGATGGAGGTTTAA

Protein sequence

MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPNGDMKVKMEV

Homology

[Close]

BLAST of Lcy11g020300 vs. ExPASy Swiss-Prot
Match: F4HPA7 (Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana OX=3702 GN=MED10B PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.7e-67
Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD TQN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTVT+F  A QL LLQR+NSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQS 180
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA  KR+AQ+QS
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQS 180

Query: 181 MLPNGDMKVKMEV 190
           +LPNGD KVK E+
Sbjct: 181 VLPNGDAKVKNEL 189

[Close]

BLAST of Lcy11g020300 vs. ExPASy Swiss-Prot
Match: Q9FHZ2 (Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana OX=3702 GN=MED10A PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.5e-62
Identity = 133/190 (70.00%), Postives = 156/190 (82.11%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MD TQN  + AG G    NGS+  + +A  TVDDS + LNQ+INS QK L +LHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLN- 120
           ++F  A QL LLQR+NSLV+ELDNM KLS+KC IQVP+EV+NLIDDGKNPDEFT+DVLN 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLP 180
           +CIAKNQ TKGK+DAFKGLRKHLLEELEQ FPDEV+ YR+IRA+ AAEAKR+AQ QS+LP
Sbjct: 121 NCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRLAQTQSVLP 180

Query: 181 NGDMKVKMEV 190
           NGD KVK E+
Sbjct: 181 NGDAKVKSEL 186

[Close]

BLAST of Lcy11g020300 vs. ExPASy Swiss-Prot
Match: Q16G71 (Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 GN=MED10 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-16
Identity = 42/123 (34.15%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 39  LNQVINSIQKTLGILHQLNLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPM 98
           L  + N ++  +  + Q+ + V++F    Q  L Q+I SLV  L  + KL  +  + VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQVDVNVPL 64

Query: 99  EVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYR 158
           EV + ID G+NP  +T+D ++  + KN+  KGK D+++  + +L++EL++TFP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELDETFPTEIAKYK 124

Query: 159 EIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Lcy11g020300 vs. ExPASy Swiss-Prot
Match: Q7Q5R5 (Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7165 GN=MED10 PE=3 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 5.4e-16
Identity = 42/123 (34.15%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 39  LNQVINSIQKTLGILHQLNLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPM 98
           L  + N ++  +  + Q+ + V++F    Q  L Q+I SLV  L  + KL  +  + VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQIDVNVPL 64

Query: 99  EVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYR 158
           EV + ID G+NP  +T+D ++  + KN+  KGK D+++  + +L++EL +TFP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELSETFPVEISKYK 124

Query: 159 EIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Lcy11g020300 vs. ExPASy Swiss-Prot
Match: Q9CXU0 (Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 GN=Med10 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.6e-14
Identity = 41/117 (35.04%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 46  IQKTLGILHQLNLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKC-TIQVPMEVVNLI 105
           ++K +  + QL + V++F  + Q  L Q++N +V  L ++ K  ++   I VP+EV   I
Sbjct: 12  LEKFVENIRQLGIIVSDFQPSSQAGLSQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYI 71

Query: 106 DDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIR 162
           D G+NP  +T++ L   +AKN+  KGK D  K  +  L++EL + FP+++  YR IR
Sbjct: 72  DQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIR 128

[Close]

BLAST of Lcy11g020300 vs. ExPASy TrEMBL
Match: A0A6J1HLJ2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111465259 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.4e-91
Identity = 183/189 (96.83%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+QSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQSMLPN 180

Query: 181 GDMKVKMEV 190
           GDMKVKME+
Sbjct: 181 GDMKVKMEI 189

[Close]

BLAST of Lcy11g020300 vs. ExPASy TrEMBL
Match: A0A6J1E6X8 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111431167 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.4e-91
Identity = 183/189 (96.83%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+QSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQSMLPN 180

Query: 181 GDMKVKMEV 190
           GDMKVKME+
Sbjct: 181 GDMKVKMEI 189

[Close]

BLAST of Lcy11g020300 vs. ExPASy TrEMBL
Match: A0A1S3BJY3 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 GN=LOC103490703 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 183/189 (96.83%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDMKVKMEV 190
           GDMKVKMEV
Sbjct: 181 GDMKVKMEV 189

[Close]

BLAST of Lcy11g020300 vs. ExPASy TrEMBL
Match: A0A0A0L3Q2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=3659 GN=MED10 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.5e-90
Identity = 182/189 (96.30%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDT  STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 61  MDSAQNASSAAGTGGSGGNGSVINDTPVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 120

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 121 SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 180

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 181 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 240

Query: 181 GDMKVKMEV 190
           GDMKVKMEV
Sbjct: 241 GDMKVKMEV 249

[Close]

BLAST of Lcy11g020300 vs. ExPASy TrEMBL
Match: A0A6J1CVZ0 (Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX=3673 GN=LOC111014791 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.7e-89
Identity = 179/189 (94.71%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSAS TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLV+ELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDMKVKMEV 190
           GD+KVKMEV
Sbjct: 181 GDVKVKMEV 189

[Close]

BLAST of Lcy11g020300 vs. NCBI nr
Match: XP_022923485.1 (mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923486.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923487.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923488.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923489.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923491.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923492.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022965379.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965380.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965381.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965383.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965384.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965385.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965386.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_023553208.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553209.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553210.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553211.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553212.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.7 bits (883), Expect = 4.9e-91
Identity = 183/189 (96.83%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+QSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQSMLPN 180

Query: 181 GDMKVKMEV 190
           GDMKVKME+
Sbjct: 181 GDMKVKMEI 189

[Close]

BLAST of Lcy11g020300 vs. NCBI nr
Match: XP_008448559.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448560.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448561.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 2.4e-90
Identity = 183/189 (96.83%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDMKVKMEV 190
           GDMKVKMEV
Sbjct: 181 GDMKVKMEV 189

[Close]

BLAST of Lcy11g020300 vs. NCBI nr
Match: XP_038876576.1 (mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876578.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876579.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876580.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida])

HSP 1 Score: 342.0 bits (876), Expect = 3.2e-90
Identity = 183/189 (96.83%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGS GNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSSGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCAIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDMKVKMEV 190
           GDMKVKMEV
Sbjct: 181 GDMKVKMEV 189

[Close]

BLAST of Lcy11g020300 vs. NCBI nr
Match: XP_004146135.1 (mediator of RNA polymerase II transcription subunit 10b [Cucumis sativus] >XP_031739316.1 mediator of RNA polymerase II transcription subunit 10b [Cucumis sativus] >KAE8650007.1 hypothetical protein Csa_009833 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 9.3e-90
Identity = 182/189 (96.30%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDT  STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTPVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDMKVKMEV 190
           GDMKVKMEV
Sbjct: 181 GDMKVKMEV 189

[Close]

BLAST of Lcy11g020300 vs. NCBI nr
Match: XP_022145303.1 (mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145304.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145305.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145306.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia])

HSP 1 Score: 338.6 bits (867), Expect = 3.5e-89
Identity = 179/189 (94.71%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSAS TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLV+ELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDMKVKMEV 190
           GD+KVKMEV
Sbjct: 181 GDVKVKMEV 189

[Close]

BLAST of Lcy11g020300 vs. TAIR 10
Match: AT1G26665.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 259.2 bits (661), Expect = 2.5e-69
Identity = 144/193 (74.61%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD TQN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTVT+F  A QL LLQR+NSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQS 180
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAAEAKR+AQ+QS
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAEAKRLAQSQS 180

Query: 181 MLPNGDMKVKMEV 190
           +LPNGD KVK E+
Sbjct: 181 VLPNGDAKVKNEL 189

[Close]

BLAST of Lcy11g020300 vs. TAIR 10
Match: AT1G26665.2 (Mediator complex, subunit Med10 )

HSP 1 Score: 255.0 bits (650), Expect = 4.8e-68
Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD TQN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTVT+F  A QL LLQR+NSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQS 180
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA  KR+AQ+QS
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQS 180

Query: 181 MLPNGDMKVKMEV 190
           +LPNGD KVK E+
Sbjct: 181 VLPNGDAKVKNEL 189

[Close]

BLAST of Lcy11g020300 vs. TAIR 10
Match: AT5G41910.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 238.0 bits (606), Expect = 6.0e-63
Identity = 133/190 (70.00%), Postives = 156/190 (82.11%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MD TQN  + AG G    NGS+  + +A  TVDDS + LNQ+INS QK L +LHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLN- 120
           ++F  A QL LLQR+NSLV+ELDNM KLS+KC IQVP+EV+NLIDDGKNPDEFT+DVLN 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLP 180
           +CIAKNQ TKGK+DAFKGLRKHLLEELEQ FPDEV+ YR+IRA+ AAEAKR+AQ QS+LP
Sbjct: 121 NCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRLAQTQSVLP 180

Query: 181 NGDMKVKMEV 190
           NGD KVK E+
Sbjct: 181 NGDAKVKSEL 186

The following BLAST results are available for this feature:

BLAST of Lcy11g020300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HPA7	6.7e-67	73.58	Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana ...	[more]
Q9FHZ2	8.5e-62	70.00	Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana ...	[more]
Q16G71	2.4e-16	34.15	Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 ...	[more]
Q7Q5R5	5.4e-16	34.15	Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7...	[more]
Q9CXU0	6.6e-14	35.04	Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 ...	[more]

BLAST of Lcy11g020300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLJ2	2.4e-91	96.83	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=36...	[more]
A0A6J1E6X8	2.4e-91	96.83	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=...	[more]
A0A1S3BJY3	1.2e-90	96.83	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 G...	[more]
A0A0A0L3Q2	4.5e-90	96.30	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=365...	[more]
A0A6J1CVZ0	1.7e-89	94.71	Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX...	[more]

BLAST of Lcy11g020300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923485.1	4.9e-91	96.83	mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata...	[more]
XP_008448559.1	2.4e-90	96.83	PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [C...	[more]
XP_038876576.1	3.2e-90	96.83	mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida]...	[more]
XP_004146135.1	9.3e-90	96.30	mediator of RNA polymerase II transcription subunit 10b [Cucumis sativus] >XP_03...	[more]
XP_022145303.1	3.5e-89	94.71	mediator of RNA polymerase II transcription subunit 10b-like [Momordica charanti...	[more]

BLAST of Lcy11g020300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26665.1	2.5e-69	74.61	Mediator complex, subunit Med10	[more]
AT1G26665.2	4.8e-68	73.58	Mediator complex, subunit Med10	[more]
AT5G41910.1	6.0e-63	70.00	Mediator complex, subunit Med10	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019145	Mediator complex, subunit Med10	PFAM	PF09748	Med10	coord: 45..158 e-value: 9.6E-29 score: 99.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 1..188
None	No IPR available	PANTHER	PTHR13345:SF9	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10A-RELATED	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g020300.1	Lcy11g020300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity