Lcy11g020280 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g020280
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Enoyl-CoA hydratase, mitochondrial
Location	Chr11: 47942165 .. 47942543 (-)
RNA-Seq Expression	Lcy11g020280
Synteny	Lcy11g020280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCTAAACGTGTTTTTCATAGGGCAGGTGGGACTGCAAGGCTTCCTAGGGTGGTGGGGAAATCAATAGCAAAGGAACTTATATTCACAGGTGGTAAGGTCAGTGGAAAAGATGCAATGTCTATAGGTATGATCACCAAAAGAACTTTTTGGCTAGAGTTCTGTGTTTTATCAAGGAGAAGAAAATAAAATTTCATGCTCCAGGTTTTGTCAATTACTGTGTCCCTGCTGGTGAAGCTTATGCAAAGGCACTAGAAATTGCCCAAGAGATAAATAAGAAGGTAAGTAGAACATGTAAATATAATTATCTGTGGCCGCCATGTCGACAATTTGTTATTTGTATGTTTTACCTTCCTTAATTTAGTCTGCTAATTAA

mRNA sequence

ATGCCTTCTAAACGTGTTTTTCATAGGGCAGGTGGGACTGCAAGGCTTCCTAGGGTGGTGGGGAAATCAATAGCAAAGGAACTTATATTCACAGGTGGTAAGGTCAGTGGAAAAGATGCAATGTCTATAGGTTTTGTCAATTACTGTGTCCCTGCTGGTGAAGCTTATGCAAAGGCACTAGAAATTGCCCAAGAGATAAATAAGAAGTCTGCTAATTAA

Coding sequence (CDS)

ATGCCTTCTAAACGTGTTTTTCATAGGGCAGGTGGGACTGCAAGGCTTCCTAGGGTGGTGGGGAAATCAATAGCAAAGGAACTTATATTCACAGGTGGTAAGGTCAGTGGAAAAGATGCAATGTCTATAGGTTTTGTCAATTACTGTGTCCCTGCTGGTGAAGCTTATGCAAAGGCACTAGAAATTGCCCAAGAGATAAATAAGAAGTCTGCTAATTAA

Protein sequence

MPSKRVFHRAGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKKSAN

Homology

[Close]

BLAST of Lcy11g020280 vs. ExPASy Swiss-Prot
Match: F4JML5 (Probable enoyl-CoA hydratase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g16800 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-13
Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGT RL R+VG+S++KELIFTG K+   +A + G VN CV AGEA+ KA+E+AQ+IN+K
Sbjct: 184 AGGTQRLSRLVGRSVSKELIFTGRKIDAIEAANKGLVNICVTAGEAHEKAIEMAQQINEK 243

[Close]

BLAST of Lcy11g020280 vs. ExPASy Swiss-Prot
Match: Q54HG7 (Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=auh PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-09
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGT RLPR++G   AKELIFTG  +  K A+ IG V Y    GEA+ KA+EIA++I  K
Sbjct: 186 AGGTQRLPRLIGIPRAKELIFTGAILDSKRALEIGLVQYETEKGEAFDKAIEIAKQIIPK 245

[Close]

BLAST of Lcy11g020280 vs. ExPASy Swiss-Prot
Match: Q3TLP5 (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus OX=10090 GN=Echdc2 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 5.4e-09
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGE----AYAKALEIAQE 67
           AGGT RLPR +G ++AKELIFTG +++G  A  +G VN+ V   E    AY +AL +AQE
Sbjct: 175 AGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVNHAVAQNEEGNAAYHRALALAQE 234

[Close]

BLAST of Lcy11g020280 vs. ExPASy Swiss-Prot
Match: Q2TBT3 (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Bos taurus OX=9913 GN=ECHDC2 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.1e-09
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGE----AYAKALEIAQE 67
           AGGT RLPR +G ++AKELIFTG ++SG  A ++G VN+ V   E    AY +A  +AQE
Sbjct: 175 AGGTQRLPRCLGVALAKELIFTGRRLSGAQAQALGLVNHAVAQNEEGNAAYHRARALAQE 234

[Close]

BLAST of Lcy11g020280 vs. ExPASy Swiss-Prot
Match: Q86YB7 (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Homo sapiens OX=9606 GN=ECHDC2 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-08
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGE----AYAKALEIAQE 67
           AGGT RLPR +G ++AKELIFTG ++SG +A  +G VN+ V   E    AY +A  +AQE
Sbjct: 171 AGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQE 230

[Close]

BLAST of Lcy11g020280 vs. ExPASy TrEMBL
Match: A0A6J1KT67 (probable enoyl-CoA hydratase 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498438 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-22
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 3   SKRVFHRAGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEI 62
           S+RVF RAGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAG AY KALEI
Sbjct: 215 SERVFCRAGGTARLPRLVGKSIAKELIFTGRKVSGRDAISIGLVNYCVPAGGAYVKALEI 274

Query: 63  AQEINKK 70
           AQEIN+K
Sbjct: 275 AQEINQK 281

[Close]

BLAST of Lcy11g020280 vs. ExPASy TrEMBL
Match: A0A6J1HJH0 (probable enoyl-CoA hydratase 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465075 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-21
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAGEAYAKALEIAQEIN+K
Sbjct: 197 AGGTARLPRLVGKSIAKELIFTGRKVSGRDALSIGLVNYCVPAGEAYAKALEIAQEINQK 256

[Close]

BLAST of Lcy11g020280 vs. ExPASy TrEMBL
Match: A0A6J1E5X2 (probable enoyl-CoA hydratase 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431086 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-21
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAGEAYAKALEIAQEIN+K
Sbjct: 211 AGGTARLPRLVGKSIAKELIFTGRKVSGRDALSIGLVNYCVPAGEAYAKALEIAQEINQK 270

[Close]

BLAST of Lcy11g020280 vs. ExPASy TrEMBL
Match: A0A5A7THC3 (Putative enoyl-CoA hydratase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00600 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-21
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAGEAYAKALEIAQEIN+K
Sbjct: 211 AGGTARLPRLVGKSIAKELIFTGRKVSGRDALSIGLVNYCVPAGEAYAKALEIAQEINQK 270

[Close]

BLAST of Lcy11g020280 vs. ExPASy TrEMBL
Match: A0A6J1HQ43 (probable enoyl-CoA hydratase 2, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465075 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-21
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAGEAYAKALEIAQEIN+K
Sbjct: 196 AGGTARLPRLVGKSIAKELIFTGRKVSGRDALSIGLVNYCVPAGEAYAKALEIAQEINQK 255

[Close]

BLAST of Lcy11g020280 vs. NCBI nr
Match: XP_023005457.1 (probable enoyl-CoA hydratase 2, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 113.6 bits (283), Expect = 7.0e-22
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 3   SKRVFHRAGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEI 62
           S+RVF RAGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAG AY KALEI
Sbjct: 215 SERVFCRAGGTARLPRLVGKSIAKELIFTGRKVSGRDAISIGLVNYCVPAGGAYVKALEI 274

Query: 63  AQEINKK 70
           AQEIN+K
Sbjct: 275 AQEINQK 281

[Close]

BLAST of Lcy11g020280 vs. NCBI nr
Match: XP_023540838.1 (probable enoyl-CoA hydratase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21
Identity = 55/67 (82.09%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 3   SKRVFHRAGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEI 62
           ++RVF RAGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAG AY KALEI
Sbjct: 215 AERVFCRAGGTARLPRLVGKSIAKELIFTGRKVSGRDAISIGLVNYCVPAGGAYVKALEI 274

Query: 63  AQEINKK 70
           A+EIN+K
Sbjct: 275 AREINQK 281

[Close]

BLAST of Lcy11g020280 vs. NCBI nr
Match: XP_022965120.1 (probable enoyl-CoA hydratase 2, mitochondrial isoform X3 [Cucurbita maxima])

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-20
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAGEAYAKALEIAQEIN+K
Sbjct: 172 AGGTARLPRLVGKSIAKELIFTGRKVSGRDALSIGLVNYCVPAGEAYAKALEIAQEINQK 231

[Close]

BLAST of Lcy11g020280 vs. NCBI nr
Match: XP_008448801.1 (PREDICTED: probable enoyl-CoA hydratase 2, mitochondrial isoform X2 [Cucumis melo] >KAA0041061.1 putative enoyl-CoA hydratase 2 [Cucumis melo var. makuwa] >TYK12047.1 putative enoyl-CoA hydratase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-20
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAGEAYAKALEIAQEIN+K
Sbjct: 211 AGGTARLPRLVGKSIAKELIFTGRKVSGRDALSIGLVNYCVPAGEAYAKALEIAQEINQK 270

[Close]

BLAST of Lcy11g020280 vs. NCBI nr
Match: XP_023551723.1 (probable enoyl-CoA hydratase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551724.1 probable enoyl-CoA hydratase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-20
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGTARLPR+VGKSIAKELIFTG KVSG+DA+SIG VNYCVPAGEAYAKALEIAQEIN+K
Sbjct: 211 AGGTARLPRLVGKSIAKELIFTGRKVSGRDALSIGLVNYCVPAGEAYAKALEIAQEINQK 270

[Close]

BLAST of Lcy11g020280 vs. TAIR 10
Match: AT4G16800.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-14
Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 10  AGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEINKK 69
           AGGT RL R+VG+S++KELIFTG K+   +A + G VN CV AGEA+ KA+E+AQ+IN+K
Sbjct: 184 AGGTQRLSRLVGRSVSKELIFTGRKIDAIEAANKGLVNICVTAGEAHEKAIEMAQQINEK 243

[Close]

BLAST of Lcy11g020280 vs. TAIR 10
Match: AT4G16210.1 (enoyl-CoA hydratase/isomerase A )

HSP 1 Score: 43.5 bits (101), Expect = 8.3e-05
Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 6   VFHRAGGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQE 65
           +F   G + +L R++G + A+E+  T   ++   A  +GFVN+ V  GEA  KA EIA+ 
Sbjct: 140 IFPSWGLSQKLSRIIGANKAREVSLTSMPLTADVAGKLGFVNHVVEEGEALKKAREIAEA 199

Query: 66  INK 69
           I K
Sbjct: 200 IIK 202

[Close]

BLAST of Lcy11g020280 vs. TAIR 10
Match: AT3G06860.1 (multifunctional protein 2 )

HSP 1 Score: 41.6 bits (96), Expect = 3.2e-04
Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = 0


Query: 11  GGTARLPRVVGKSIAKELIFTGGKVSGKDAMSIGFVNYCVPAGEAYAKALEIAQEI 67
           GGT RLPR+VG + A E+I T   V  ++  S+G ++  VP  E    A   A +I
Sbjct: 149 GGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDI 204

The following BLAST results are available for this feature:

BLAST of Lcy11g020280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JML5	1.6e-13	60.00	Probable enoyl-CoA hydratase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q54HG7	1.1e-09	55.00	Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum OX=446...	[more]
Q3TLP5	5.4e-09	52.46	Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus O...	[more]
Q2TBT3	7.1e-09	52.46	Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Bos taurus OX=...	[more]
Q86YB7	1.2e-08	52.46	Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Homo sapiens O...	[more]

BLAST of Lcy11g020280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KT67	3.4e-22	85.07	probable enoyl-CoA hydratase 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1HJH0	4.9e-21	90.00	probable enoyl-CoA hydratase 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1E5X2	4.9e-21	90.00	probable enoyl-CoA hydratase 2, mitochondrial isoform X1 OS=Cucurbita moschata O...	[more]
A0A5A7THC3	4.9e-21	90.00	Putative enoyl-CoA hydratase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1HQ43	4.9e-21	90.00	probable enoyl-CoA hydratase 2, mitochondrial isoform X2 OS=Cucurbita maxima OX=...	[more]

BLAST of Lcy11g020280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005457.1	7.0e-22	85.07	probable enoyl-CoA hydratase 2, mitochondrial isoform X1 [Cucurbita maxima]	[more]
XP_023540838.1	4.5e-21	82.09	probable enoyl-CoA hydratase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. ...	[more]
XP_022965120.1	1.0e-20	90.00	probable enoyl-CoA hydratase 2, mitochondrial isoform X3 [Cucurbita maxima]	[more]
XP_008448801.1	1.0e-20	90.00	PREDICTED: probable enoyl-CoA hydratase 2, mitochondrial isoform X2 [Cucumis mel...	[more]
XP_023551723.1	1.0e-20	90.00	probable enoyl-CoA hydratase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. ...	[more]

BLAST of Lcy11g020280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16800.1	1.2e-14	60.00	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT4G16210.1	8.3e-05	38.10	enoyl-CoA hydratase/isomerase A	[more]
AT3G06860.1	3.2e-04	39.29	multifunctional protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001753	Enoyl-CoA hydratase/isomerase	PFAM	PF00378	ECH_1	coord: 9..71 e-value: 4.7E-11 score: 42.5
None	No IPR available	GENE3D	3.90.226.10		coord: 5..72 e-value: 9.1E-20 score: 72.9
None	No IPR available	PANTHER	PTHR11941	ENOYL-COA HYDRATASE-RELATED	coord: 10..70
None	No IPR available	PANTHER	PTHR11941:SF105	FI23914P1-RELATED	coord: 10..70
None	No IPR available	CDD	cd06558	crotonase-like	coord: 10..66 e-value: 2.1529E-17 score: 69.8968
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 7..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g020280.1	Lcy11g020280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044281	small molecule metabolic process
molecular_function	GO:0003824	catalytic activity