Lcy11g018950 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g018950
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	AAI domain-containing protein
Location	Chr11: 45864780 .. 45866960 (-)
RNA-Seq Expression	Lcy11g018950
Synteny	Lcy11g018950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCAACTCCCAAAGTCAATCGAGCACTAATAAAGATATGCAAAATCCTCCGCACGCAGCGCACTATATAACCACGCGTGGGGCTAAGGCCGAAGGGCAGAGGGCGAGGAAGGCATTCGTGTGAGTGAGGACTTTTGTCAAACAGATGGCGGGCATTCGAGTGGGGCTGTGGCGCTGGGGCTTGGTGCTGGGCGCGGTGGTGCTGGCGGTGGAGATGGCCGGCACGGCGGCGCTGACAGCGGCGGAGTGCAAGGCGGAGAGAGACATGGCGGTGAAGGAGTGCATGACGGTGGTGTTCGGGAGGAATCCGTCGCCGGCGTGCTGCGAGAGGGCGAGAGTGAGCCATACGGAGTGTATTTGCCCAGCAGTTACGCCTAAGCTCATGACTTATGTCGATCCTAATCGCGCCATTCGCCTCATCCAAGGCTGTGGCCGTAAGGTTCCTCGCCATTTCAAATGTGGAAGTAAGCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTCTTGAGTAATAAGCTCTTTTCTTTTTTTGGTTCTCTCTTTCTTATAATCTTATAAACTATATTTTTTTCGAAAAATTATTCAATCAAACTGCCATAATAGGGAGAAGTTATTAGGTGCTCTCAATGCGAGCGAGTAGTTTTGCTTCGTTGAATATAAGAGAGAGAAATTGTAAAAATACTTCGATTTTGCATCCAACGGTTATTGCGAGTACTTTTAAAGAGAGAGCTGCATTGCACCGGAAGCACCTAATAATTTGTCCATAATATGGTTGCGGCTTAATATATCATGGGAAGTGGATCCAAAATCTGTTTCATTTGATCACTAGATACAATTTTGAAATATTTTATGGTTAAGTTACAAGGTTAGTTCCTCTTTTTGGGTTGTTTCATTTGGTCCATGAACTTGTCTAATAGATCCTTGAATTTTCAATTTTGTGTTTCTTGAACTTTAAAAATGCATGATAAATCATTGAACTTTCAATTTTATGTCTAATAGATCCTTGGAGTTAAAAAATGTTTAACAAGTCTCTGAACTTTTAATTTTGTGTCTAATAGATCCCTAGCACATTCAAAATTTTAAAAATCAACCGATCTAATATATATAAAATTGAAAATTATGTCTATTGGGACTCTAAACTTTCAATTTTGCATCTAATAGGTTTGTAAATTTTTTAAAAAAATGTCGAATAGGTCAAAGACTTATTAGACACAAAAGTAAAAGTTTAAGGATTTATTGGATACTTTTAAAAGCTCATAGACCTATTGGACTCAAAATTGAAAGTTTGAATGCCTAATTGACATTTTGAAAGTTCAGAGACCAAATTGACACAATTCTTAAAGCTTAAAAATTAAACTTGTAATTGAATCTACTTTTATTAAACAAGAAATTGAAAGTTTAAAAATTTATTAGACACAAAATTCAATTTGAATGACGAATCACATTGAACCATTGATCTACCTATATCTCTATAAAGTATAAAATAGAATTAAAATCCCTTCACTAATTCTATTAAATCCTTTTTAACAGTTTATTGAAAAACACTTCACTAATTATAAAAGTTTAGTCCCTACTATTAGTATGATGCATTGACAGTTTCATTTAAGTTCTTTTTAGTACAAAAAAATATAGAGGTAGAGTAGATGTTTCACAAGTTATTCTTATATACGAGTGGTATCAATTAGAATTTAATAAATTTATTGAAAATTATTAAGAAACATAATGTATTTTATAATTATAAAAAAAATAGTGGTTATATATTCACACAAAAACACACACATATATATATATATATTTTATAATTTTTCAATTTACCATAAATCAACTAGTCAAGATATTATTTACATTTTTAAAAGTTTGATGTTAGATATTTAAGATAATTATATTTCAGACTGTTTATTTAAATTTTAATGATATACAAGTTAATTATCTAAATATGTGAAATTAATGTTTGTAATGCAGGTTTCACTACTCCATGAAAGTTATCATTGGGACATTACAATAAGCAAGCCTGAAGAGAGATAAAGACTTGAAGAGAGAGATAGAGGTTGAATGATATGATATTGTGTGTGTGTGTTTGTTTTCTTGTTTTCTTTTTAGAGAGTGGCTTGTTTAATGTTATAAGGTTATAGACACTACACTTTTTATCCCTAGATTAAAATAAATAAATAAAGTTTAGTTA

mRNA sequence

TCCCAACTCCCAAAGTCAATCGAGCACTAATAAAGATATGCAAAATCCTCCGCACGCAGCGCACTATATAACCACGCGTGGGGCTAAGGCCGAAGGGCAGAGGGCGAGGAAGGCATTCGTGTGAGTGAGGACTTTTGTCAAACAGATGGCGGGCATTCGAGTGGGGCTGTGGCGCTGGGGCTTGGTGCTGGGCGCGGTGGTGCTGGCGGTGGAGATGGCCGGCACGGCGGCGCTGACAGCGGCGGAGTGCAAGGCGGAGAGAGACATGGCGGTGAAGGAGTGCATGACGGTGGTGTTCGGGAGGAATCCGTCGCCGGCGTGCTGCGAGAGGGCGAGAGTGAGCCATACGGAGTGTATTTGCCCAGCAGTTACGCCTAAGCTCATGACTTATGTCGATCCTAATCGCGCCATTCGCCTCATCCAAGGCTGTGGCCGTAAGGTTCCTCGCCATTTCAAATGTGGAAGTTTCACTACTCCATGAAAGTTATCATTGGGACATTACAATAAGCAAGCCTGAAGAGAGATAAAGACTTGAAGAGAGAGATAGAGGTTGAATGATATGATATTGTGTGTGTGTGTTTGTTTTCTTGTTTTCTTTTTAGAGAGTGGCTTGTTTAATGTTATAAGGTTATAGACACTACACTTTTTATCCCTAGATTAAAATAAATAAATAAAGTTTAGTTA

Coding sequence (CDS)

ATGGCGGGCATTCGAGTGGGGCTGTGGCGCTGGGGCTTGGTGCTGGGCGCGGTGGTGCTGGCGGTGGAGATGGCCGGCACGGCGGCGCTGACAGCGGCGGAGTGCAAGGCGGAGAGAGACATGGCGGTGAAGGAGTGCATGACGGTGGTGTTCGGGAGGAATCCGTCGCCGGCGTGCTGCGAGAGGGCGAGAGTGAGCCATACGGAGTGTATTTGCCCAGCAGTTACGCCTAAGCTCATGACTTATGTCGATCCTAATCGCGCCATTCGCCTCATCCAAGGCTGTGGCCGTAAGGTTCCTCGCCATTTCAAATGTGGAAGTTTCACTACTCCATGA

Protein sequence

MAGIRVGLWRWGLVLGAVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPACCERARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP

Homology

[Close]

BLAST of Lcy11g018950 vs. ExPASy TrEMBL
Match: A0A6J1E6K1 (uncharacterized protein LOC111431169 OS=Cucurbita moschata OX=3662 GN=LOC111431169 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 91/109 (83.49%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 3   GIRVGLWRWGLVLGAVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPACCER 62
           G+ +G+ RWGLVL AVV+AV +   AALTAA+CKAERDMAVKEC+ VVFGRNPSPACC+R
Sbjct: 5   GMGMGMRRWGLVL-AVVMAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACCQR 64

Query: 63  ARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           ARVSHTECICPAVTPKLMTYVDPNRAIRLI+GCGRKVPRHFKCGS+TTP
Sbjct: 65  ARVSHTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGSYTTP 112

[Close]

BLAST of Lcy11g018950 vs. ExPASy TrEMBL
Match: A0A6J1EBZ9 (uncharacterized protein LOC111431170 OS=Cucurbita moschata OX=3662 GN=LOC111431170 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MAGIRVGLWRWGLVLG-AVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPAC 60
           M G+ +G+ RWGLVL  AVV+AV +   AALTAA+CKAERDMAVKEC+ VVFG NPSPAC
Sbjct: 1   MVGMGIGMRRWGLVLAVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPAC 60

Query: 61  CERARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           C+RARVSHTECICPAVTPKLMTYVDPNRAIRLI+ CGRKVPRHFKCGS TTP
Sbjct: 61  CQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSLTTP 112

[Close]

BLAST of Lcy11g018950 vs. ExPASy TrEMBL
Match: A0A6J1HN99 (uncharacterized protein LOC111465144 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.3e-44
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 3   GIRVGLWRWGLVLG-AVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPACCE 62
           G+ +G+ RWGLVL  AVV+AV +   AALTAA+CKAERDMAVKEC+ VVFG NPSPACC+
Sbjct: 7   GMGMGMKRWGLVLTVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQ 66

Query: 63  RARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           RARVSHTECICPAVTPKLMTYVDPNRAIRLI+ CGRKVPRHFKCGS+TTP
Sbjct: 67  RARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSYTTP 116

[Close]

BLAST of Lcy11g018950 vs. ExPASy TrEMBL
Match: A0A6J1HJS5 (uncharacterized protein LOC111465144 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.8e-43
Identity = 89/110 (80.91%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 3   GIRVGLWRWGLVLG-AVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPACCE 62
           G+ +G+ RWGLVL  AVV+AV +   AALTAA+CKAERDMAVKEC+ VVFG NPSPACC+
Sbjct: 7   GMGMGMKRWGLVLTVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQ 66

Query: 63  RARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           RARVSHTECICPAVTPKLMTYVDPNRAIRLI+ CGRKVPRHFKCGS TTP
Sbjct: 67  RARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSLTTP 116

[Close]

BLAST of Lcy11g018950 vs. ExPASy TrEMBL
Match: A0A6J1HQF4 (uncharacterized protein LOC111465144 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43
Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MAGIRVGLWRWGLVLG-AVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPAC 60
           M  I +G+ RWGLVL   VV+AV +   AALTAA+CKAER+MAVKEC+ VVFGR+PSPAC
Sbjct: 1   MVSIGIGMRRWGLVLAVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRSPSPAC 60

Query: 61  CERARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           C+RARVSHTECICPAVT KLMTYVDP+RAIRLI+GCGRKVPRHFKCGS+TTP
Sbjct: 61  CQRARVSHTECICPAVTAKLMTYVDPSRAIRLIEGCGRKVPRHFKCGSYTTP 112

[Close]

BLAST of Lcy11g018950 vs. NCBI nr
Match: XP_022923494.1 (uncharacterized protein LOC111431169 [Cucurbita moschata])

HSP 1 Score: 191.8 bits (486), Expect = 3.1e-45
Identity = 91/109 (83.49%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 3   GIRVGLWRWGLVLGAVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPACCER 62
           G+ +G+ RWGLVL AVV+AV +   AALTAA+CKAERDMAVKEC+ VVFGRNPSPACC+R
Sbjct: 5   GMGMGMRRWGLVL-AVVMAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACCQR 64

Query: 63  ARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           ARVSHTECICPAVTPKLMTYVDPNRAIRLI+GCGRKVPRHFKCGS+TTP
Sbjct: 65  ARVSHTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGSYTTP 112

[Close]

BLAST of Lcy11g018950 vs. NCBI nr
Match: XP_022923495.1 (uncharacterized protein LOC111431170 [Cucurbita moschata])

HSP 1 Score: 188.3 bits (477), Expect = 3.5e-44
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MAGIRVGLWRWGLVLG-AVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPAC 60
           M G+ +G+ RWGLVL  AVV+AV +   AALTAA+CKAERDMAVKEC+ VVFG NPSPAC
Sbjct: 1   MVGMGIGMRRWGLVLAVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPAC 60

Query: 61  CERARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           C+RARVSHTECICPAVTPKLMTYVDPNRAIRLI+ CGRKVPRHFKCGS TTP
Sbjct: 61  CQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSLTTP 112

[Close]

BLAST of Lcy11g018950 vs. NCBI nr
Match: XP_023553118.1 (uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 3.5e-44
Identity = 89/113 (78.76%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MAGIRVGLWRWGLVLG--AVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPA 60
           M G+ +G+ RWGLVL    VV+AV +   AALTAA+CKAER+MAVKEC+ VVFGRNPSPA
Sbjct: 1   MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA 60

Query: 61  CCERARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           CC+RARVSHTECICPAVTPKLMTYVDPNRAIRLI+ CGRKVPRHFKCGS+TTP
Sbjct: 61  CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSYTTP 113

[Close]

BLAST of Lcy11g018950 vs. NCBI nr
Match: XP_023553186.1 (uncharacterized protein LOC111810675 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 89/113 (78.76%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 1   MAGIRVGLWRWGLVLG--AVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPA 60
           M G+ +G+ RWGLVL   AVV+AV +   AALT A+CKAERDMAVKEC+ VVFG NPSPA
Sbjct: 1   MVGMGIGMRRWGLVLAVVAVVMAVAVGEVAALTPAQCKAERDMAVKECLAVVFGSNPSPA 60

Query: 61  CCERARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           CC+RARVSHTECICPAVTPKLMTYVDPNRAIRLI+ CGRKVPRHFKCGS TTP
Sbjct: 61  CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSLTTP 113

[Close]

BLAST of Lcy11g018950 vs. NCBI nr
Match: XP_022965228.1 (uncharacterized protein LOC111465144 isoform X2 [Cucurbita maxima])

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 3   GIRVGLWRWGLVLG-AVVLAVEMAGTAALTAAECKAERDMAVKECMTVVFGRNPSPACCE 62
           G+ +G+ RWGLVL  AVV+AV +   AALTAA+CKAERDMAVKEC+ VVFG NPSPACC+
Sbjct: 7   GMGMGMKRWGLVLTVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQ 66

Query: 63  RARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
           RARVSHTECICPAVTPKLMTYVDPNRAIRLI+ CGRKVPRHFKCGS+TTP
Sbjct: 67  RARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSYTTP 116

[Close]

BLAST of Lcy11g018950 vs. TAIR 10
Match: AT4G33550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 2.5e-08
Identity = 32/110 (29.09%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 12  GLVLGAVVLAVE--MAGTAALTAAE---CKAERDMAVKECMTVVF-----GRNPSPACCE 71
           G++   V+LA+   M G+  +  A+   C A     + EC   V       + PS +CC 
Sbjct: 4   GMIRTLVILAIALFMIGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCA 63

Query: 72  RARVSHTECICPAVTPKLMTYVDPNRAIRLIQGCGRKVPRHFKCGSFTTP 112
             R     C C  V+  +  Y+D ++ + + + CG+K+P  +KCGS+T P
Sbjct: 64  LIRPIDVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGSYTIP 113

The following BLAST results are available for this feature:

BLAST of Lcy11g018950 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g018950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6K1	1.5e-45	83.49	uncharacterized protein LOC111431169 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1EBZ9	1.7e-44	80.36	uncharacterized protein LOC111431170 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1HN99	8.3e-44	80.91	uncharacterized protein LOC111465144 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HJS5	1.8e-43	80.91	uncharacterized protein LOC111465144 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HQF4	7.0e-43	77.68	uncharacterized protein LOC111465144 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lcy11g018950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923494.1	3.1e-45	83.49	uncharacterized protein LOC111431169 [Cucurbita moschata]	[more]
XP_022923495.1	3.5e-44	80.36	uncharacterized protein LOC111431170 [Cucurbita moschata]	[more]
XP_023553118.1	3.5e-44	78.76	uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo]	[more]
XP_023553186.1	1.3e-43	78.76	uncharacterized protein LOC111810675 [Cucurbita pepo subsp. pepo]	[more]
XP_022965228.1	1.7e-43	80.91	uncharacterized protein LOC111465144 isoform X2 [Cucurbita maxima]	[more]

BLAST of Lcy11g018950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33550.2	2.5e-08	29.09	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 17..105 e-value: 1.1E-10 score: 41.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 31..103 e-value: 2.0E-7 score: 33.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 43..101
None	No IPR available	PANTHER	PTHR33286:SF38	SUBFAMILY NOT NAMED	coord: 11..111
None	No IPR available	PANTHER	PTHR33286	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 11..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g018950.1	Lcy11g018950.1	mRNA