Lcy11g018440 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g018440
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat superfamily protein, putative
Location	Chr11: 45107012 .. 45108881 (+)
RNA-Seq Expression	Lcy11g018440
Synteny	Lcy11g018440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGACTCTTCTCTACCAAATTTCTACTATACCTACAAACACAAAAGCCACTACTTCAAAAATCTGCCACCACATTTCACAATGCCAACAATTTTCAGCTATGTTCCTCAATCGACGACCAAGATCCATGGACCAGCCTCCGAGTGGCTCTTGCCGGCGGCGGCCGCACGGCCGAGTTGGCTCTAGCCGAAGCCTTTCAGGCGCTCAAGTGCAACCCAAATGGCTACGCTCTGGTTCAACTGGTTCGAGCCTGCACGAGCCAGGCCTGGGATTTCTGTGGCCACCAGCTTCACAGCTACATTTTACGATCTGGGTTTGCCTCTAATGTCTTCGTGGCCACAGCCATGGTCAACTTCTACATAAAAAGTGAGTCCTTTGATAATGCCCATAAGGTGTTTGATGAAATGCCTCAACCAAGTTTGGTTTCTTGGAACTCTTTGATCTCTGGTTATGTGCATTGTGGGCAGTTTCGCAAGGCTTTGTCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGATTCATATTCTTTGTCTGCAGCTTTGAGTGCCTCTGGTCAGCTGGGTTGGTTGCCATTGGGTCAGTCGATTCATTCAAAAGTTGTAAAACTTGGCCTAGAAGGTAATACCATTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGCGAGTCTTTTGAAGAGGCAGTTGATGTGTTCAATGACATGATTGGAAAGGATACTATTTCATGGAATTCGGTTATTGCAGCCACAGCTAGAAATGGAAGGCTAGAACAAGCATCGAGATATTTGCAACAGATGCCTCGACCTGATACTATATCGTATAATGAATTGATAAACGGTTATGCTCAATTTGGAGATATTGAAGATGCTGTCGAAATTCTATCAAAGATGGATAGTCCAAACTCTTCATCTTGGAATGCGGTTTTAACGGGATATGTTGATAGGGGTGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGGGTGATGTCGGAATGGATCAATTCACATTTTCAAGCGTTTTGAGTGGCATTGCAAGGTTCTCAACTTTGACATGGGGTTTGTCAATTCATTGTTGCATAATTAAATGTGGTTTAGATACATCAACGATTGTTGGTAGTGCCCTAATCGATATGTACTCCAAATGTGGGCATGTGAACTATGCTGAATTGATATTTCAGTCATTGCCCAAGAAGAACTTGGTATCCTGGAACGCAATGATCTCGGGTTTGGCTCACAATGGCAAAACAATGGAAGTGATCCATCTTTTTGAGAAGCTAAAGATGATGAAAGACGTCAAACCTGATAGCATCACATTTCTTAATATTCTACTTTCATGTTCAAATAACCAAGTTCCATGGGAGACCACAATGCAGTACTTCAAATCAATGATTGAGGATTATGGTATCAAACCAACTATTGAGCATTGTTGTACTTTGGTTAGGCTAATGGGACAAAGAGGGGATGTGTATAGAACTACAAGGCTGATATACGAGCTAGGATTTGGTTCGAGCGGATCGGTGTGGAGAGCTCTTCTGGGCACTTGTGTAGCTTGTAGGGATTTAAAACTGGCAAAGATAGTAGCTGCAAAAGTAATCGAATTGGGGGTTGCTGATGATTATGTACATGTTATGATGTCCAACATATTTGCATCTCATGGAAAATGGAGAGATGTGAGAGAGGTTAGGGAGCTGATGAGAAAGAAAGGGGTTAGAAAAGAAACTGGTTATAGTTGGTTGATTGAGGTGGAAAACGAAAATTCTTCATTGTCTAGTTCGTGTCAAACTGACCTTTAAAATAAGAATTACATGCTTCTTTAGAAACAACATTTTGCAGATTTTTCCCTTTTGCATA

mRNA sequence

ATGCAAAGACTCTTCTCTACCAAATTTCTACTATACCTACAAACACAAAAGCCACTACTTCAAAAATCTGCCACCACATTTCACAATGCCAACAATTTTCAGCTATGTTCCTCAATCGACGACCAAGATCCATGGACCAGCCTCCGAGTGGCTCTTGCCGGCGGCGGCCGCACGGCCGAGTTGGCTCTAGCCGAAGCCTTTCAGGCGCTCAAGTGCAACCCAAATGGCTACGCTCTGGTTCAACTGGTTCGAGCCTGCACGAGCCAGGCCTGGGATTTCTGTGGCCACCAGCTTCACAGCTACATTTTACGATCTGGGTTTGCCTCTAATGTCTTCGTGGCCACAGCCATGGTCAACTTCTACATAAAAAGTGAGTCCTTTGATAATGCCCATAAGGTGTTTGATGAAATGCCTCAACCAAGTTTGGTTTCTTGGAACTCTTTGATCTCTGGTTATGTGCATTGTGGGCAGTTTCGCAAGGCTTTGTCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGATTCATATTCTTTGTCTGCAGCTTTGAGTGCCTCTGGTCAGCTGGGTTGGTTGCCATTGGGTCAGTCGATTCATTCAAAAGTTGTAAAACTTGGCCTAGAAGCCACAGCTAGAAATGGAAGGCTAGAACAAGCATCGAGATATTTGCAACAGATGCCTCGACCTGATACTATATCGTATAATGAATTGATAAACGGTTATGCTCAATTTGGAGATATTGAAGATGCTGTCGAAATTCTATCAAAGATGGATAGTCCAAACTCTTCATCTTGGAATGCGGTTTTAACGGGATATGTTGATAGGGGTGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGGGTGATGTCGGAATGGATCAATTCACATTTTCAAGCGTTTTGAGTGGCATTGCAAGGTTCTCAACTTTGACATGGGGTTTGTCAATTCATTGTTGCATAATTAAATGTGGTTTAGATACATCAACGATTGTTGGTAGTGCCCTAATCGATATGTACTCCAAATGTGGGCATGTGAACTATGCTGAATTGATATTTCAGTCATTGCCCAAGAAGAACTTGGTATCCTGGAACGCAATGATCTCGGGTTTGGCTCACAATGGCAAAACAATGGAAGTGATCCATCTTTTTGAGAAGCTAAAGATGATGAAAGACGTCAAACCTGATAGCATCACATTTCTTAATATTCTACTTTCATGTTCAAATAACCAAGTTCCATGGGAGACCACAATGCAGTACTTCAAATCAATGATTGAGGATTATGGTATCAAACCAACTATTGAGCATTGTTGTACTTTGGTTAGGCTAATGGGACAAAGAGGGGATGTGTATAGAACTACAAGGCTGATATACGAGCTAGGATTTGGTTCGAGCGGATCGGTGTGGAGAGCTCTTCTGGGCACTTGTGTAGCTTGTAGGGATTTAAAACTGGCAAAGATAGTAGCTGCAAAAGTAATCGAATTGGGGGTTGCTGATGATTATGTACATGTTATGATGTCCAACATATTTGCATCTCATGGAAAATGGAGAGATGTGAGAGAGGTTAGGGAGCTGATGAGAAAGAAAGGGGTTAGAAAAGAAACTGGTTATAGTTGGTTGATTGAGGTGGAAAACGAAAATTCTTCATTGTCTAGTTCGTGTCAAACTGACCTTTAAAATAAGAATTACATGCTTCTTTAGAAACAACATTTTGCAGATTTTTCCCTTTTGCATA

Coding sequence (CDS)

ATGCAAAGACTCTTCTCTACCAAATTTCTACTATACCTACAAACACAAAAGCCACTACTTCAAAAATCTGCCACCACATTTCACAATGCCAACAATTTTCAGCTATGTTCCTCAATCGACGACCAAGATCCATGGACCAGCCTCCGAGTGGCTCTTGCCGGCGGCGGCCGCACGGCCGAGTTGGCTCTAGCCGAAGCCTTTCAGGCGCTCAAGTGCAACCCAAATGGCTACGCTCTGGTTCAACTGGTTCGAGCCTGCACGAGCCAGGCCTGGGATTTCTGTGGCCACCAGCTTCACAGCTACATTTTACGATCTGGGTTTGCCTCTAATGTCTTCGTGGCCACAGCCATGGTCAACTTCTACATAAAAAGTGAGTCCTTTGATAATGCCCATAAGGTGTTTGATGAAATGCCTCAACCAAGTTTGGTTTCTTGGAACTCTTTGATCTCTGGTTATGTGCATTGTGGGCAGTTTCGCAAGGCTTTGTCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGATTCATATTCTTTGTCTGCAGCTTTGAGTGCCTCTGGTCAGCTGGGTTGGTTGCCATTGGGTCAGTCGATTCATTCAAAAGTTGTAAAACTTGGCCTAGAAGCCACAGCTAGAAATGGAAGGCTAGAACAAGCATCGAGATATTTGCAACAGATGCCTCGACCTGATACTATATCGTATAATGAATTGATAAACGGTTATGCTCAATTTGGAGATATTGAAGATGCTGTCGAAATTCTATCAAAGATGGATAGTCCAAACTCTTCATCTTGGAATGCGGTTTTAACGGGATATGTTGATAGGGGTGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGGGTGATGTCGGAATGGATCAATTCACATTTTCAAGCGTTTTGAGTGGCATTGCAAGGTTCTCAACTTTGACATGGGGTTTGTCAATTCATTGTTGCATAATTAAATGTGGTTTAGATACATCAACGATTGTTGGTAGTGCCCTAATCGATATGTACTCCAAATGTGGGCATGTGAACTATGCTGAATTGATATTTCAGTCATTGCCCAAGAAGAACTTGGTATCCTGGAACGCAATGATCTCGGGTTTGGCTCACAATGGCAAAACAATGGAAGTGATCCATCTTTTTGAGAAGCTAAAGATGATGAAAGACGTCAAACCTGATAGCATCACATTTCTTAATATTCTACTTTCATGTTCAAATAACCAAGTTCCATGGGAGACCACAATGCAGTACTTCAAATCAATGATTGAGGATTATGGTATCAAACCAACTATTGAGCATTGTTGTACTTTGGTTAGGCTAATGGGACAAAGAGGGGATGTGTATAGAACTACAAGGCTGATATACGAGCTAGGATTTGGTTCGAGCGGATCGGTGTGGAGAGCTCTTCTGGGCACTTGTGTAGCTTGTAGGGATTTAAAACTGGCAAAGATAGTAGCTGCAAAAGTAATCGAATTGGGGGTTGCTGATGATTATGTACATGTTATGATGTCCAACATATTTGCATCTCATGGAAAATGGAGAGATGTGAGAGAGGTTAGGGAGCTGATGAGAAAGAAAGGGGTTAGAAAAGAAACTGGTTATAGTTGGTTGATTGAGGTGGAAAACGAAAATTCTTCATTGTCTAGTTCGTGTCAAACTGACCTTTAA

Protein sequence

MQRLFSTKFLLYLQTQKPLLQKSATTFHNANNFQLCSSIDDQDPWTSLRVALAGGGRTAELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSYSLSAALSASGQLGWLPLGQSIHSKVVKLGLEATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILSKMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTWGLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVIELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENENSSLSSSCQTDL

Homology

[Close]

BLAST of Lcy11g018440 vs. ExPASy Swiss-Prot
Match: Q9FGL1 (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E103 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.3e-134
Identity = 242/551 (43.92%), Postives = 347/551 (62.98%), Query Frame = 0


Query: 38  SIDDQDPWTSLRVALAGGGRTAELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQ 97
           S    + W+++  ALA  G    L  A         P+   LV L+R   +  +     Q
Sbjct: 17  STASSNSWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQ 76

Query: 98  LHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQ 157
           LH Y+ + GF SN  ++ +++ FY  S+S ++AHKVFDEMP P ++SWNSL+SGYV  G+
Sbjct: 77  LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136

Query: 158 FRKALSLFIQLDGSENLVDSYSLSAALSASGQLGWLPLGQSIHSKVVKLGLE-------- 217
           F++ + LF++L  S+   + +S +AAL+A  +L   PLG  IHSK+VKLGLE        
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196

Query: 218 -----------------------------------ATARNGRLEQASRYLQQMPRPDTIS 277
                                              + +RNG+LE    +  QMP PDT++
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVT 256

Query: 278 YNELINGYAQFGDIEDAVEILSKMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDV 337
           YNELI+ + + GD  +A ++LS M +PNSSSWN +LTGYV+  ++ +A  FFTKMHS  V
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGV 316

Query: 338 GMDQFTFSSVLSGIARFSTLTWGLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAEL 397
             D+++ S VL+ +A  + + WG  IH C  K GLD+  +V SALIDMYSKCG + +AEL
Sbjct: 317 RFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAEL 376

Query: 398 IFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQ 457
           +F ++P+KNL+ WN MISG A NG ++E I LF +LK  + +KPD  TFLN+L  CS+ +
Sbjct: 377 MFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCE 436

Query: 458 VPWETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRA 517
           VP E  + YF+ MI +Y IKP++EHCC+L+R MGQRG+V++  ++I E GFG  G  WRA
Sbjct: 437 VPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRA 496

Query: 518 LLGTCVACRDLKLAKIVAAKVIELGVA--DDYVHVMMSNIFASHGKWRDVREVRELMRKK 544
           LLG C A +DLK AK VAAK+IELG A  D+Y++++MSN++A H +WR+V ++R++MR+ 
Sbjct: 497 LLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRES 556

[Close]

BLAST of Lcy11g018440 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.2e-73
Identity = 161/487 (33.06%), Postives = 262/487 (53.80%), Query Frame = 0


Query: 75  NGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVF 134
           N Y+   ++ AC+       G Q+HS I +S F S+V++ +A+V+ Y K  + ++A +VF
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 135 DEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSYSLSAALSASGQLGWLP 194
           DEM   ++VSWNSLI+ +   G   +AL +F  +  S    D  +L++ +SA   L  + 
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 195 LGQSIHSKVVK------------LGLEATARNGRLEQASRYLQQMPRPDTISYNELINGY 254
           +GQ +H +VVK              ++  A+  R+++A      MP  + I+   +I+GY
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330

Query: 255 AQFGDIEDAVEILSKMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFS 314
           A     + A  + +KM   N  SWNA++ GY   GE  +ALS F  +    V    ++F+
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390

Query: 315 SVLSGIARFSTLTWGLSIHCCIIKCGL------DTSTIVGSALIDMYSKCGHVNYAELIF 374
           ++L   A  + L  G+  H  ++K G       +    VG++LIDMY KCG V    L+F
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450

Query: 375 QSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVP 434
           + + +++ VSWNAMI G A NG   E + LF ++ +    KPD IT + +L +C +    
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREM-LESGEKPDHITMIGVLSACGHAGFV 510

Query: 435 WETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALL 494
            E    YF SM  D+G+ P  +H   +V L+G+ G +     +I E+       +W +LL
Sbjct: 511 -EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 570

Query: 495 GTCVACRDLKLAKIVAAKVIELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRK 544
             C   R++ L K VA K++E+  ++   +V++SN++A  GKW DV  VR+ MRK+GV K
Sbjct: 571 AACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 630

[Close]

BLAST of Lcy11g018440 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.1e-70
Identity = 164/511 (32.09%), Postives = 269/511 (52.64%), Query Frame = 0


Query: 45  WTSLRVALAGGGR--TAELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYI 104
           W +L  A A G     +  A  +     +C PN Y    L++A    +    G  LH   
Sbjct: 98  WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157

Query: 105 LRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKAL 164
           ++S   S+VFVA ++++ Y      D+A KVF  + +  +VSWNS+I+G+V  G   KAL
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217

Query: 165 SLFIQLDGSENLVDSYSLSAALSASGQLGWLPLGQSIHSKVV--KLGLEATARN------ 224
            LF +++  +      ++   LSA  ++  L  G+ + S +   ++ +  T  N      
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277

Query: 225 ---GRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILSKMDSPNSSSWNAVLT 284
              G +E A R    M   D +++  +++GYA   D E A E+L+ M   +  +WNA+++
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337

Query: 285 GYVDRGEAWKALSFFTKMH-SGDVGMDQFTFSSVLSGIARFSTLTWGLSIHCCIIKCGLD 344
            Y   G+  +AL  F ++    ++ ++Q T  S LS  A+   L  G  IH  I K G+ 
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397

Query: 345 TSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKL 404
            +  V SALI MYSKCG +  +  +F S+ K+++  W+AMI GLA +G   E + +F K+
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457

Query: 405 KMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQR 464
           +   +VKP+ +TF N+  +CS+  +  E     F  M  +YGI P  +H   +V ++G+ 
Sbjct: 458 Q-EANVKPNGVTFTNVFCACSHTGLVDEAE-SLFHQMESNYGIVPEEKHYACIVDVLGRS 517

Query: 465 GDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVIELGVADDYVHVMMS 524
           G + +  + I  +    S SVW ALLG C    +L LA++   +++EL   +D  HV++S
Sbjct: 518 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 577

Query: 525 NIFASHGKWRDVREVRELMRKKGVRKETGYS 542
           NI+A  GKW +V E+R+ MR  G++KE G S
Sbjct: 578 NIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606

[Close]

BLAST of Lcy11g018440 vs. ExPASy Swiss-Prot
Match: Q9FIB2 (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-68
Identity = 150/510 (29.41%), Postives = 267/510 (52.35%), Query Frame = 0


Query: 41  DQDPWTSLRVALAGGGRTAELALAEAFQALKCN---PNGYALVQLVRACTSQAWDFCGHQ 100
           D   W S+   L   G   E    E +++++ +   P  + L+  + +C S  W   G Q
Sbjct: 379 DSVSWNSMITGLDQNGCFIE--AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 438

Query: 101 LHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQ 160
           +H   L+ G   NV V+ A++  Y ++   +   K+F  MP+   VSWNS+I       +
Sbjct: 439 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 498

Query: 161 -FRKALSLFIQLDGSENLVDSYSLSAALSASGQLGWLPLGQSIHSKVVKLGLEATARNGR 220
              +A+  F+    +   ++  + S+ LSA   L +  LG+ IH   +K        N  
Sbjct: 499 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK--------NNI 558

Query: 221 LEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILSKM-DSPNSSSWNAVLTGYVD 280
            ++A+            + N LI  Y + G+++   +I S+M +  ++ +WN++++GY+ 
Sbjct: 559 ADEAT------------TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 618

Query: 281 RGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTWGLSIHCCIIKCGLDTSTIV 340
                KAL     M      +D F +++VLS  A  +TL  G+ +H C ++  L++  +V
Sbjct: 619 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 678

Query: 341 GSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMMKD 400
           GSAL+DMYSKCG ++YA   F ++P +N  SWN+MISG A +G+  E + LFE +K+   
Sbjct: 679 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 738

Query: 401 VKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQRGDVYR 460
             PD +TF+ +L +CS+  +  E   ++F+SM + YG+ P IEH   +  ++G+ G++ +
Sbjct: 739 TPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 798

Query: 461 TTRLIYELGFGSSGSVWRALLGTCVAC--RDLKLAKIVAAKVIELGVADDYVHVMMSNIF 520
               I ++    +  +WR +LG C     R  +L K  A  + +L   +   +V++ N++
Sbjct: 799 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 858

Query: 521 ASHGKWRDVREVRELMRKKGVRKETGYSWL 544
           A+ G+W D+ + R+ M+   V+KE GYSW+
Sbjct: 859 AAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

[Close]

BLAST of Lcy11g018440 vs. ExPASy Swiss-Prot
Match: Q9FWA6 (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 253.1 bits (645), Expect = 7.6e-66
Identity = 151/480 (31.46%), Postives = 265/480 (55.21%), Query Frame = 0


Query: 78  ALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEM 137
           +L  + RAC        G Q++   ++S  + +V VA A ++ Y K ++   A +VFDEM
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 443

Query: 138 PQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSYSLSAALSA--SGQLGWLPL 197
            +   VSWN++I+ +   G+  + L LF+ +  S    D ++  + L A   G LG+   
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY--- 503

Query: 198 GQSIHSKVVKLGLEATARNGRLEQASRYLQQMPRPDTISYNELING-YAQFGDIEDAVEI 257
           G  IHS +VK G+ + +  G        +    +   I   E I+  + Q  ++   +E 
Sbjct: 504 GMEIHSSIVKSGMASNSSVG-----CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEE 563

Query: 258 LSKMDSPNSS----SWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIAR 317
           L KM +        SWN++++GYV + ++  A   FT+M    +  D+FT+++VL   A 
Sbjct: 564 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 623

Query: 318 FSTLTWGLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAM 377
            ++   G  IH  +IK  L +   + S L+DMYSKCG ++ + L+F+   +++ V+WNAM
Sbjct: 624 LASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAM 683

Query: 378 ISGLAHNGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIED 437
           I G AH+GK  E I LFE++ +++++KP+ +TF++IL +C++  +  +  ++YF  M  D
Sbjct: 684 ICGYAHHGKGEEAIQLFERM-ILENIKPNHVTFISILRACAHMGL-IDKGLEYFYMMKRD 743

Query: 438 YGIKPTIEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACR-DLKLAK 497
           YG+ P + H   +V ++G+ G V R   LI E+ F +   +WR LLG C   R ++++A+
Sbjct: 744 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 803

Query: 498 IVAAKVIELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENE 550
              A ++ L   D   + ++SN++A  G W  V ++R  MR   ++KE G SW +E+++E
Sbjct: 804 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW-VELKDE 852

[Close]

BLAST of Lcy11g018440 vs. ExPASy TrEMBL
Match: A0A6J1L1J5 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita maxima OX=3661 GN=LOC111500270 PE=4 SV=1)

HSP 1 Score: 942.2 bits (2434), Expect = 1.0e-270
Identity = 478/596 (80.20%), Postives = 508/596 (85.23%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSATT--FHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQ+ F TK  LYLQTQKPLLQKSA T    NA NFQ C S + QDPWTS R+ LAGGGRT
Sbjct: 1   MQKPFYTKLQLYLQTQKPLLQKSAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           AELALAEAFQALKCNPNGYALVQLVRACT+ AWD CGHQLHSYILRSGFASNVFV TAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFY+KSESFD+AHKVFDEMPQP+LVSWNSLISGYVHCGQFR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLSAAL+ASGQLGWL LGQSIHSKVVKLGLE                             
Sbjct: 181 SLSAALNASGQLGWLILGQSIHSKVVKLGLENNTIVANCLIDTYGKCESFEEAVKVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARNGRLEQASRYL+QMPRPDTISYNELING AQFGDIE+AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASRYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
            MDSPNSSSWNAVLTGYVDR EAWKALSFFTKMHS ++GMDQFTFSS+LSG+A  S LTW
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNIGMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           G SIHCCI K GLDTST+VGSALIDMYSKCGHVNYAE+IFQSLPKKNLVSWNAMISGLA 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAR 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVIHLFEKLK MKDV PDSITFL+ILLSCS+NQVP ETTMQYFKSMIED+GI+PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSILLSCSDNQVPLETTMQYFKSMIEDFGIEPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           +EHCCT+VRLMGQRGDVYR+ +LI+ELGF S+GSVWRALLG C   +DLKLAK+ AAKVI
Sbjct: 481 VEHCCTMVRLMGQRGDVYRSKKLIHELGFDSNGSVWRALLGACALWKDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENENSS 553
           ELG ADDYVHVMMSNI ASHGKWRDVREVRELMRKKGVRKETGYSWLIE+ENENSS
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVRELMRKKGVRKETGYSWLIEMENENSS 596

[Close]

BLAST of Lcy11g018440 vs. ExPASy TrEMBL
Match: A0A6J1E9S2 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita moschata OX=3662 GN=LOC111431163 PE=4 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 3.7e-265
Identity = 471/596 (79.03%), Postives = 501/596 (84.06%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSATT--FHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQR F+TK  LYLQTQ PLLQK A T    NA NFQ C S + QDPWTS R+ LAGGGRT
Sbjct: 1   MQRSFATKLQLYLQTQNPLLQKFAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           AELALAEAFQALKCNPNGYALVQLVRACT+ AWD CG QLHSYILRSGFASNVFV TAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGRQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFY+KSESFD+AHKVFDEMPQP+LVSWNSLISGYVHCGQFR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLSAALSASGQLG L LGQSIHSK VKLGLE                             
Sbjct: 181 SLSAALSASGQLGLLILGQSIHSKAVKLGLENNTIVANCLIDMYGKCESFEEAVKVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARNGRLEQAS YL+QMPRPDTISYNELING AQFGDIE+AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASSYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
            MDSPNSSSWNAVLTGYVDR EAWKALSFFTKMHS +V MDQFTFSS+LSG+A  S LTW
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNVDMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           G SIHCCI K GLDTST+VGSALIDMYSKCGHVNYAE+IFQSLPKKNLVSWNAMISGLA 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAQ 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVIHLFEKLK MKDV PDSITFL++LLSCS+NQVP ETTMQYFKSMIED+GIKPT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSLLLSCSDNQVPLETTMQYFKSMIEDFGIKPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           +EHCCT+VRL+GQRGDVYR+ RLI+ELGF S+GSVWRA+LG C   +DLKLAK+ AAKVI
Sbjct: 481 VEHCCTMVRLIGQRGDVYRSKRLIHELGFDSNGSVWRAVLGACAVWKDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENENSS 553
           ELG ADDYVHVMMSNI ASHGKWRDVREVRE+MRKKGVRKETGYSWLIE+ NENSS
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVREVMRKKGVRKETGYSWLIEMANENSS 596

[Close]

BLAST of Lcy11g018440 vs. ExPASy TrEMBL
Match: A0A0A0L6U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019960 PE=4 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.9e-261
Identity = 465/593 (78.41%), Postives = 497/593 (83.81%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSAT--TFHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQR FSTK +L     KPLLQK +   + HNA+NFQ C SIDDQ P T++R ALAGGG T
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           A+LALAEAF+ALKCNPNGYALVQLVRACTS A D CGHQLHSYILRSGFASNVFV TAMV
Sbjct: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFYIK+ESFD+AHK+FDEMPQPSLV+WNSLISGYVHCGQFRKAL LFIQLDGS NLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLS ALSASG LGWL LGQSIHSKV+KLGLE                             
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARNGRLEQASRYLQQMPRPDTIS+NELINGYAQFGDIE AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
           KMDSPNSSSWNAVLTGYVDR E W+ALSFFTKMHS DV MDQFTFSS+LSG+A  S L W
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           GL+IHCCI KCGLDTST+VGSALI MYSKCGHVNYAE+IFQSLPKKNLVSWNAMISGLAH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVIHLFEKLKM KDVKPD+ITFLNILLSCS+NQVP E TMQY+KSM+EDYGIKPT
Sbjct: 421 NGKTMEVIHLFEKLKMTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           IEHCCT+VRLMGQRGDVY + RLI+ELGF SSG VWRALLG C   RDLKLAK+ AAKVI
Sbjct: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENE 550
            LG ADDYV+VMMSNIFASHGKWRDV+ VRELMR KGVRKETGYSWLIE+ENE
Sbjct: 541 VLGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 588

[Close]

BLAST of Lcy11g018440 vs. ExPASy TrEMBL
Match: A0A5D3CKT8 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00420 PE=4 SV=1)

HSP 1 Score: 899.0 bits (2322), Expect = 9.7e-258
Identity = 462/593 (77.91%), Postives = 493/593 (83.14%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSAT--TFHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQR FSTK +L     KPLLQK +   + HNA+NFQ C S+DDQ P T+LR ALAGGG T
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           AELALAEAF+ALKCNPNGYALVQLVRACTS AWD CGHQLHSYILRSGFASNVFV TAMV
Sbjct: 61  AELALAEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFYIK+ESFD+AHK+FDEMPQPSLV+WNSLISGYV CGQFRKAL LFIQLDGSENLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLS ALSASG LGWL LGQSIHSKVVKLGLE                             
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARN RLEQASRYLQ+MPRPDTIS+NELINGYAQFGDIE AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNRRLEQASRYLQRMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
           KMDSPNSSSWNAVLTGYVDR E WKALSFFTKMHS DVGMDQFTFSS+LSG+A  S L W
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           GL+IHCCI KCGLDTST+VGSALI+MYSKCGHVN AE+IFQSLPKKNLVSWNAMISGLAH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVI LFEKLK  KDVKPD+ITFL IL SCS+NQVP E TMQ FKSM+EDYGIKPT
Sbjct: 421 NGKTMEVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           IEHCCT+VRLMGQRGDV+ + RLI+ELGF SSGSVWRALLG C   RDLKLAK+ AAKVI
Sbjct: 481 IEHCCTMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENE 550
            LG ADDYV+VMMSNIFASHGKWRDV+ VRELM KKG RKETGYSWLIE+ENE
Sbjct: 541 VLGAADDYVYVMMSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENE 588

[Close]

BLAST of Lcy11g018440 vs. ExPASy TrEMBL
Match: A0A1S3BK19 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucumis melo OX=3656 GN=LOC103490879 PE=4 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 4.8e-257
Identity = 461/593 (77.74%), Postives = 492/593 (82.97%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSAT--TFHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQR FSTK +L     KPLLQK +   + HNA+NFQ C S+DDQ P T+LR ALAGGG T
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           AELALAEAF+ALKCNPNGYALVQLVRACTS AWD CGHQLHSYILRSGFASNVFV TAMV
Sbjct: 61  AELALAEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFYIK+ESFD+AHK+FDEMPQPSLV+WNSLISGYV CGQFRKAL LFIQLDGSENLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLS ALSASG LGWL LGQSIHSKVVKLGLE                             
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARN RLEQASRYLQ MPRPDTIS+NELINGYAQFGDIE AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNRRLEQASRYLQLMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
           KMDSPNSSSWNAVLTGYVDR E WKALSFFTKMHS DVGMDQFTFSS+LSG+A  S L W
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           GL+IHCCI KCGLDTST+VGSALI+MYSKCGHVN AE+IFQSLPKKNLVSWNAMISGLAH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVI LFEKLK  KDVKPD+ITFL IL SCS+NQVP E TMQ FKSM+EDYGIKPT
Sbjct: 421 NGKTMEVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           IEHCCT+VRLMGQRGDV+ + RLI+ELGF SSGSVWRALLG C   RDLKLAK+ AAKVI
Sbjct: 481 IEHCCTMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENE 550
            LG ADDYV+VM+SNIFASHGKWRDV+ VRELM KKG RKETGYSWLIE+ENE
Sbjct: 541 VLGAADDYVYVMLSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENE 588

[Close]

BLAST of Lcy11g018440 vs. NCBI nr
Match: XP_023007751.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita maxima])

HSP 1 Score: 942.2 bits (2434), Expect = 2.1e-270
Identity = 478/596 (80.20%), Postives = 508/596 (85.23%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSATT--FHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQ+ F TK  LYLQTQKPLLQKSA T    NA NFQ C S + QDPWTS R+ LAGGGRT
Sbjct: 1   MQKPFYTKLQLYLQTQKPLLQKSAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           AELALAEAFQALKCNPNGYALVQLVRACT+ AWD CGHQLHSYILRSGFASNVFV TAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFY+KSESFD+AHKVFDEMPQP+LVSWNSLISGYVHCGQFR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLSAAL+ASGQLGWL LGQSIHSKVVKLGLE                             
Sbjct: 181 SLSAALNASGQLGWLILGQSIHSKVVKLGLENNTIVANCLIDTYGKCESFEEAVKVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARNGRLEQASRYL+QMPRPDTISYNELING AQFGDIE+AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASRYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
            MDSPNSSSWNAVLTGYVDR EAWKALSFFTKMHS ++GMDQFTFSS+LSG+A  S LTW
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNIGMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           G SIHCCI K GLDTST+VGSALIDMYSKCGHVNYAE+IFQSLPKKNLVSWNAMISGLA 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAR 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVIHLFEKLK MKDV PDSITFL+ILLSCS+NQVP ETTMQYFKSMIED+GI+PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSILLSCSDNQVPLETTMQYFKSMIEDFGIEPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           +EHCCT+VRLMGQRGDVYR+ +LI+ELGF S+GSVWRALLG C   +DLKLAK+ AAKVI
Sbjct: 481 VEHCCTMVRLMGQRGDVYRSKKLIHELGFDSNGSVWRALLGACALWKDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENENSS 553
           ELG ADDYVHVMMSNI ASHGKWRDVREVRELMRKKGVRKETGYSWLIE+ENENSS
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVRELMRKKGVRKETGYSWLIEMENENSS 596

[Close]

BLAST of Lcy11g018440 vs. NCBI nr
Match: XP_038905285.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Benincasa hispida])

HSP 1 Score: 941.0 bits (2431), Expect = 4.6e-270
Identity = 478/605 (79.01%), Postives = 508/605 (83.97%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSATT--FHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQR FS+K LLYLQTQ PLLQKS TT   H+A+NFQ C SID Q PWTSLR ALAGGGRT
Sbjct: 1   MQRPFSSKLLLYLQTQNPLLQKSVTTISIHDASNFQPCFSIDYQAPWTSLRTALAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           AELAL +AFQALKCNPNGY LVQLVRACTS AWD CGHQLH YILRSGFASNVFV TAMV
Sbjct: 61  AELALTKAFQALKCNPNGYVLVQLVRACTSHAWDSCGHQLHCYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFYIKSESFD+AHKVFDEMPQPSLVSWNSLISG+VHCGQFRKALSLFIQLDGSENLVDSY
Sbjct: 121 NFYIKSESFDSAHKVFDEMPQPSLVSWNSLISGFVHCGQFRKALSLFIQLDGSENLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLG------------------------------- 240
           SLS ALSAS QLGWL LGQSIHSKVVKLG                               
Sbjct: 181 SLSTALSASSQLGWLKLGQSIHSKVVKLGVADNTIVANCLIDMYGKCESFEEAVKVFNEI 240

Query: 241 -----------LEATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                      + A+ARNGRLEQASRYL+QMP+PDTISYNELINGYAQFG+IE AVEILS
Sbjct: 241 IDKDVISWNSVIAASARNGRLEQASRYLRQMPQPDTISYNELINGYAQFGEIEVAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
           KMDSPNSSSWNAVLTGYVDR EAWKALSFFTKMH  DVGMDQFTFSS+LSG+A  S L W
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHLWDVGMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           GL+IHCCI KCGL  ST+VGSALIDMYSKCGHVNYAE+IFQSLPKKNLVSWNAMISGLAH
Sbjct: 361 GLAIHCCITKCGLGKSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVIHLFEKLK MKDVKPD+ITFLNILLSCS+NQ+P E TMQYFKSM+EDYGIKPT
Sbjct: 421 NGKTMEVIHLFEKLKKMKDVKPDNITFLNILLSCSDNQLPLEATMQYFKSMVEDYGIKPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           IEHCCT+VRLMGQRGDVYR+ RLI+ELGF +SGSVWRA LG C A RDLKLAK+ AAKV 
Sbjct: 481 IEHCCTMVRLMGQRGDVYRSKRLIHELGFDTSGSVWRAFLGVCGASRDLKLAKVAAAKVT 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENENSSLSSS 562
            LG ADDYVHVMMSNI ASHGKWRDV+ +RELMRK GVRKETGYSWLIE+ENE SS + S
Sbjct: 541 VLGAADDYVHVMMSNICASHGKWRDVKLIRELMRKNGVRKETGYSWLIEMENEISSSNQS 600

[Close]

BLAST of Lcy11g018440 vs. NCBI nr
Match: XP_023553024.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 931.8 bits (2407), Expect = 2.8e-267
Identity = 474/596 (79.53%), Postives = 502/596 (84.23%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSATT--FHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQR FSTK  LYLQTQ PLL K A T    NA NFQ C S + QDPWTS R+ LAGGGRT
Sbjct: 1   MQRSFSTKLQLYLQTQNPLLLKFAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           AELALAEAFQALKCNPNGYALVQLVRACT+ AWD CG QLHSYILRSGFASNVFV TAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGRQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFY+KSESFD+AHKVFDEMPQP+LVSWNSLISGYVHCGQFR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLSAALSASGQLGWL LGQSIHSK VKLGLE                             
Sbjct: 181 SLSAALSASGQLGWLILGQSIHSKAVKLGLENNTIVANCLIDMYGKCESFEEAVKVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARNGRLEQAS YL+QMPRPDTISYNELING AQFGDIE+AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASSYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
            MDSPNSSSWNAVLTGYVD  EAWKALSFFTKMHS ++GMDQFTFSS+LSG+A  S LTW
Sbjct: 301 TMDSPNSSSWNAVLTGYVDGDEAWKALSFFTKMHSCNIGMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           G SIHCCI K GLDTST+VGSALIDMYSKCGHVNYAE IFQSLPKKNLVSWNAMISGLA 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAETIFQSLPKKNLVSWNAMISGLAR 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVIHLFEKLK MKDVKPDSITFL++LLSCS+NQVP ETTMQYFKSMIED+GIKPT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVKPDSITFLSLLLSCSDNQVPLETTMQYFKSMIEDFGIKPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           +EHCCT+VRLMGQRGDVYR+ RLI+ELGF S+GSVWRALLG C   +DLKLAK+ AAKVI
Sbjct: 481 VEHCCTMVRLMGQRGDVYRSKRLIHELGFDSNGSVWRALLGACAVWKDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENENSS 553
           ELG ADDYVHVMMSNI ASHG+WRDVREVRE+MRKKGVRKETGYSWLIE+ENENSS
Sbjct: 541 ELGAADDYVHVMMSNILASHGRWRDVREVREVMRKKGVRKETGYSWLIEMENENSS 596

[Close]

BLAST of Lcy11g018440 vs. NCBI nr
Match: XP_022923483.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita moschata])

HSP 1 Score: 923.7 bits (2386), Expect = 7.6e-265
Identity = 471/596 (79.03%), Postives = 501/596 (84.06%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSATT--FHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQR F+TK  LYLQTQ PLLQK A T    NA NFQ C S + QDPWTS R+ LAGGGRT
Sbjct: 1   MQRSFATKLQLYLQTQNPLLQKFAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           AELALAEAFQALKCNPNGYALVQLVRACT+ AWD CG QLHSYILRSGFASNVFV TAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGRQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFY+KSESFD+AHKVFDEMPQP+LVSWNSLISGYVHCGQFR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLSAALSASGQLG L LGQSIHSK VKLGLE                             
Sbjct: 181 SLSAALSASGQLGLLILGQSIHSKAVKLGLENNTIVANCLIDMYGKCESFEEAVKVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARNGRLEQAS YL+QMPRPDTISYNELING AQFGDIE+AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASSYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
            MDSPNSSSWNAVLTGYVDR EAWKALSFFTKMHS +V MDQFTFSS+LSG+A  S LTW
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNVDMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           G SIHCCI K GLDTST+VGSALIDMYSKCGHVNYAE+IFQSLPKKNLVSWNAMISGLA 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAQ 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVIHLFEKLK MKDV PDSITFL++LLSCS+NQVP ETTMQYFKSMIED+GIKPT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSLLLSCSDNQVPLETTMQYFKSMIEDFGIKPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           +EHCCT+VRL+GQRGDVYR+ RLI+ELGF S+GSVWRA+LG C   +DLKLAK+ AAKVI
Sbjct: 481 VEHCCTMVRLIGQRGDVYRSKRLIHELGFDSNGSVWRAVLGACAVWKDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENENSS 553
           ELG ADDYVHVMMSNI ASHGKWRDVREVRE+MRKKGVRKETGYSWLIE+ NENSS
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVREVMRKKGVRKETGYSWLIEMANENSS 596

[Close]

BLAST of Lcy11g018440 vs. NCBI nr
Match: XP_004147255.2 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis sativus])

HSP 1 Score: 911.4 bits (2354), Expect = 3.9e-261
Identity = 465/593 (78.41%), Postives = 497/593 (83.81%), Query Frame = 0


Query: 1   MQRLFSTKFLLYLQTQKPLLQKSAT--TFHNANNFQLCSSIDDQDPWTSLRVALAGGGRT 60
           MQR FSTK +L     KPLLQK +   + HNA+NFQ C SIDDQ P T++R ALAGGG T
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60

Query: 61  AELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMV 120
           A+LALAEAF+ALKCNPNGYALVQLVRACTS A D CGHQLHSYILRSGFASNVFV TAMV
Sbjct: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSY 180
           NFYIK+ESFD+AHK+FDEMPQPSLV+WNSLISGYVHCGQFRKAL LFIQLDGS NLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180

Query: 181 SLSAALSASGQLGWLPLGQSIHSKVVKLGLE----------------------------- 240
           SLS ALSASG LGWL LGQSIHSKV+KLGLE                             
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 -------------ATARNGRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILS 300
                        A+ARNGRLEQASRYLQQMPRPDTIS+NELINGYAQFGDIE AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTW 360
           KMDSPNSSSWNAVLTGYVDR E W+ALSFFTKMHS DV MDQFTFSS+LSG+A  S L W
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAH 420
           GL+IHCCI KCGLDTST+VGSALI MYSKCGHVNYAE+IFQSLPKKNLVSWNAMISGLAH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPT 480
           NGKTMEVIHLFEKLKM KDVKPD+ITFLNILLSCS+NQVP E TMQY+KSM+EDYGIKPT
Sbjct: 421 NGKTMEVIHLFEKLKMTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480

Query: 481 IEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVI 540
           IEHCCT+VRLMGQRGDVY + RLI+ELGF SSG VWRALLG C   RDLKLAK+ AAKVI
Sbjct: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 ELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENE 550
            LG ADDYV+VMMSNIFASHGKWRDV+ VRELMR KGVRKETGYSWLIE+ENE
Sbjct: 541 VLGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 588

[Close]

BLAST of Lcy11g018440 vs. TAIR 10
Match: AT5G47460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 481.5 bits (1238), Expect = 9.3e-136
Identity = 242/551 (43.92%), Postives = 347/551 (62.98%), Query Frame = 0


Query: 38  SIDDQDPWTSLRVALAGGGRTAELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQ 97
           S    + W+++  ALA  G    L  A         P+   LV L+R   +  +     Q
Sbjct: 17  STASSNSWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQ 76

Query: 98  LHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQ 157
           LH Y+ + GF SN  ++ +++ FY  S+S ++AHKVFDEMP P ++SWNSL+SGYV  G+
Sbjct: 77  LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136

Query: 158 FRKALSLFIQLDGSENLVDSYSLSAALSASGQLGWLPLGQSIHSKVVKLGLE-------- 217
           F++ + LF++L  S+   + +S +AAL+A  +L   PLG  IHSK+VKLGLE        
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196

Query: 218 -----------------------------------ATARNGRLEQASRYLQQMPRPDTIS 277
                                              + +RNG+LE    +  QMP PDT++
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVT 256

Query: 278 YNELINGYAQFGDIEDAVEILSKMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDV 337
           YNELI+ + + GD  +A ++LS M +PNSSSWN +LTGYV+  ++ +A  FFTKMHS  V
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGV 316

Query: 338 GMDQFTFSSVLSGIARFSTLTWGLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAEL 397
             D+++ S VL+ +A  + + WG  IH C  K GLD+  +V SALIDMYSKCG + +AEL
Sbjct: 317 RFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAEL 376

Query: 398 IFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQ 457
           +F ++P+KNL+ WN MISG A NG ++E I LF +LK  + +KPD  TFLN+L  CS+ +
Sbjct: 377 MFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCE 436

Query: 458 VPWETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRA 517
           VP E  + YF+ MI +Y IKP++EHCC+L+R MGQRG+V++  ++I E GFG  G  WRA
Sbjct: 437 VPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRA 496

Query: 518 LLGTCVACRDLKLAKIVAAKVIELGVA--DDYVHVMMSNIFASHGKWRDVREVRELMRKK 544
           LLG C A +DLK AK VAAK+IELG A  D+Y++++MSN++A H +WR+V ++R++MR+ 
Sbjct: 497 LLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRES 556

[Close]

BLAST of Lcy11g018440 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 278.1 bits (710), Expect = 1.6e-74
Identity = 161/487 (33.06%), Postives = 262/487 (53.80%), Query Frame = 0


Query: 75  NGYALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVF 134
           N Y+   ++ AC+       G Q+HS I +S F S+V++ +A+V+ Y K  + ++A +VF
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 135 DEMPQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSYSLSAALSASGQLGWLP 194
           DEM   ++VSWNSLI+ +   G   +AL +F  +  S    D  +L++ +SA   L  + 
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 195 LGQSIHSKVVK------------LGLEATARNGRLEQASRYLQQMPRPDTISYNELINGY 254
           +GQ +H +VVK              ++  A+  R+++A      MP  + I+   +I+GY
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330

Query: 255 AQFGDIEDAVEILSKMDSPNSSSWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFS 314
           A     + A  + +KM   N  SWNA++ GY   GE  +ALS F  +    V    ++F+
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390

Query: 315 SVLSGIARFSTLTWGLSIHCCIIKCGL------DTSTIVGSALIDMYSKCGHVNYAELIF 374
           ++L   A  + L  G+  H  ++K G       +    VG++LIDMY KCG V    L+F
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450

Query: 375 QSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVP 434
           + + +++ VSWNAMI G A NG   E + LF ++ +    KPD IT + +L +C +    
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREM-LESGEKPDHITMIGVLSACGHAGFV 510

Query: 435 WETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALL 494
            E    YF SM  D+G+ P  +H   +V L+G+ G +     +I E+       +W +LL
Sbjct: 511 -EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 570

Query: 495 GTCVACRDLKLAKIVAAKVIELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRK 544
             C   R++ L K VA K++E+  ++   +V++SN++A  GKW DV  VR+ MRK+GV K
Sbjct: 571 AACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 630

[Close]

BLAST of Lcy11g018440 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 3.6e-71
Identity = 164/511 (32.09%), Postives = 269/511 (52.64%), Query Frame = 0


Query: 45  WTSLRVALAGGGR--TAELALAEAFQALKCNPNGYALVQLVRACTSQAWDFCGHQLHSYI 104
           W +L  A A G     +  A  +     +C PN Y    L++A    +    G  LH   
Sbjct: 98  WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157

Query: 105 LRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQFRKAL 164
           ++S   S+VFVA ++++ Y      D+A KVF  + +  +VSWNS+I+G+V  G   KAL
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217

Query: 165 SLFIQLDGSENLVDSYSLSAALSASGQLGWLPLGQSIHSKVV--KLGLEATARN------ 224
            LF +++  +      ++   LSA  ++  L  G+ + S +   ++ +  T  N      
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277

Query: 225 ---GRLEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILSKMDSPNSSSWNAVLT 284
              G +E A R    M   D +++  +++GYA   D E A E+L+ M   +  +WNA+++
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337

Query: 285 GYVDRGEAWKALSFFTKMH-SGDVGMDQFTFSSVLSGIARFSTLTWGLSIHCCIIKCGLD 344
            Y   G+  +AL  F ++    ++ ++Q T  S LS  A+   L  G  IH  I K G+ 
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397

Query: 345 TSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKL 404
            +  V SALI MYSKCG +  +  +F S+ K+++  W+AMI GLA +G   E + +F K+
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457

Query: 405 KMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQR 464
           +   +VKP+ +TF N+  +CS+  +  E     F  M  +YGI P  +H   +V ++G+ 
Sbjct: 458 Q-EANVKPNGVTFTNVFCACSHTGLVDEAE-SLFHQMESNYGIVPEEKHYACIVDVLGRS 517

Query: 465 GDVYRTTRLIYELGFGSSGSVWRALLGTCVACRDLKLAKIVAAKVIELGVADDYVHVMMS 524
           G + +  + I  +    S SVW ALLG C    +L LA++   +++EL   +D  HV++S
Sbjct: 518 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 577

Query: 525 NIFASHGKWRDVREVRELMRKKGVRKETGYS 542
           NI+A  GKW +V E+R+ MR  G++KE G S
Sbjct: 578 NIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606

[Close]

BLAST of Lcy11g018440 vs. TAIR 10
Match: AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 261.5 bits (667), Expect = 1.5e-69
Identity = 150/510 (29.41%), Postives = 267/510 (52.35%), Query Frame = 0


Query: 41  DQDPWTSLRVALAGGGRTAELALAEAFQALKCN---PNGYALVQLVRACTSQAWDFCGHQ 100
           D   W S+   L   G   E    E +++++ +   P  + L+  + +C S  W   G Q
Sbjct: 379 DSVSWNSMITGLDQNGCFIE--AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 438

Query: 101 LHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEMPQPSLVSWNSLISGYVHCGQ 160
           +H   L+ G   NV V+ A++  Y ++   +   K+F  MP+   VSWNS+I       +
Sbjct: 439 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 498

Query: 161 -FRKALSLFIQLDGSENLVDSYSLSAALSASGQLGWLPLGQSIHSKVVKLGLEATARNGR 220
              +A+  F+    +   ++  + S+ LSA   L +  LG+ IH   +K        N  
Sbjct: 499 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK--------NNI 558

Query: 221 LEQASRYLQQMPRPDTISYNELINGYAQFGDIEDAVEILSKM-DSPNSSSWNAVLTGYVD 280
            ++A+            + N LI  Y + G+++   +I S+M +  ++ +WN++++GY+ 
Sbjct: 559 ADEAT------------TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 618

Query: 281 RGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIARFSTLTWGLSIHCCIIKCGLDTSTIV 340
                KAL     M      +D F +++VLS  A  +TL  G+ +H C ++  L++  +V
Sbjct: 619 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 678

Query: 341 GSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMMKD 400
           GSAL+DMYSKCG ++YA   F ++P +N  SWN+MISG A +G+  E + LFE +K+   
Sbjct: 679 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 738

Query: 401 VKPDSITFLNILLSCSNNQVPWETTMQYFKSMIEDYGIKPTIEHCCTLVRLMGQRGDVYR 460
             PD +TF+ +L +CS+  +  E   ++F+SM + YG+ P IEH   +  ++G+ G++ +
Sbjct: 739 TPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 798

Query: 461 TTRLIYELGFGSSGSVWRALLGTCVAC--RDLKLAKIVAAKVIELGVADDYVHVMMSNIF 520
               I ++    +  +WR +LG C     R  +L K  A  + +L   +   +V++ N++
Sbjct: 799 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 858

Query: 521 ASHGKWRDVREVRELMRKKGVRKETGYSWL 544
           A+ G+W D+ + R+ M+   V+KE GYSW+
Sbjct: 859 AAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

[Close]

BLAST of Lcy11g018440 vs. TAIR 10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 253.1 bits (645), Expect = 5.4e-67
Identity = 151/480 (31.46%), Postives = 265/480 (55.21%), Query Frame = 0


Query: 78  ALVQLVRACTSQAWDFCGHQLHSYILRSGFASNVFVATAMVNFYIKSESFDNAHKVFDEM 137
           +L  + RAC        G Q++   ++S  + +V VA A ++ Y K ++   A +VFDEM
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 443

Query: 138 PQPSLVSWNSLISGYVHCGQFRKALSLFIQLDGSENLVDSYSLSAALSA--SGQLGWLPL 197
            +   VSWN++I+ +   G+  + L LF+ +  S    D ++  + L A   G LG+   
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY--- 503

Query: 198 GQSIHSKVVKLGLEATARNGRLEQASRYLQQMPRPDTISYNELING-YAQFGDIEDAVEI 257
           G  IHS +VK G+ + +  G        +    +   I   E I+  + Q  ++   +E 
Sbjct: 504 GMEIHSSIVKSGMASNSSVG-----CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEE 563

Query: 258 LSKMDSPNSS----SWNAVLTGYVDRGEAWKALSFFTKMHSGDVGMDQFTFSSVLSGIAR 317
           L KM +        SWN++++GYV + ++  A   FT+M    +  D+FT+++VL   A 
Sbjct: 564 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 623

Query: 318 FSTLTWGLSIHCCIIKCGLDTSTIVGSALIDMYSKCGHVNYAELIFQSLPKKNLVSWNAM 377
            ++   G  IH  +IK  L +   + S L+DMYSKCG ++ + L+F+   +++ V+WNAM
Sbjct: 624 LASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAM 683

Query: 378 ISGLAHNGKTMEVIHLFEKLKMMKDVKPDSITFLNILLSCSNNQVPWETTMQYFKSMIED 437
           I G AH+GK  E I LFE++ +++++KP+ +TF++IL +C++  +  +  ++YF  M  D
Sbjct: 684 ICGYAHHGKGEEAIQLFERM-ILENIKPNHVTFISILRACAHMGL-IDKGLEYFYMMKRD 743

Query: 438 YGIKPTIEHCCTLVRLMGQRGDVYRTTRLIYELGFGSSGSVWRALLGTCVACR-DLKLAK 497
           YG+ P + H   +V ++G+ G V R   LI E+ F +   +WR LLG C   R ++++A+
Sbjct: 744 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 803

Query: 498 IVAAKVIELGVADDYVHVMMSNIFASHGKWRDVREVRELMRKKGVRKETGYSWLIEVENE 550
              A ++ L   D   + ++SN++A  G W  V ++R  MR   ++KE G SW +E+++E
Sbjct: 804 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW-VELKDE 852

The following BLAST results are available for this feature:

BLAST of Lcy11g018440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGL1	1.3e-134	43.92	Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis th...	[more]
Q9SIT7	2.2e-73	33.06	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
O82380	5.1e-70	32.09	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9FIB2	2.1e-68	29.41	Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th...	[more]
Q9FWA6	7.6e-66	31.46	Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop...	[more]

BLAST of Lcy11g018440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L1J5	1.0e-270	80.20	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita maxi...	[more]
A0A6J1E9S2	3.7e-265	79.03	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita mosc...	[more]
A0A0A0L6U8	1.9e-261	78.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019960 PE=4 SV=1	[more]
A0A5D3CKT8	9.7e-258	77.91	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3BK19	4.8e-257	77.74	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucumis melo O...	[more]

BLAST of Lcy11g018440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023007751.1	2.1e-270	80.20	putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita maxima...	[more]
XP_038905285.1	4.6e-270	79.01	putative pentatricopeptide repeat-containing protein At5g47460 [Benincasa hispid...	[more]
XP_023553024.1	2.8e-267	79.53	putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita pepo s...	[more]
XP_022923483.1	7.6e-265	79.03	putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita moscha...	[more]
XP_004147255.2	3.9e-261	78.41	putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis sativus]	[more]

BLAST of Lcy11g018440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47460.1	9.3e-136	43.92	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G13600.1	1.6e-74	33.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	3.6e-71	32.09	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G09950.1	1.5e-69	29.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G02330.1	5.4e-67	31.46	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 55..208 e-value: 8.5E-21 score: 76.6 coord: 209..313 e-value: 4.4E-21 score: 77.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 318..412 e-value: 2.2E-17 score: 65.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 413..553 e-value: 2.0E-7 score: 32.5
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 230..258 e-value: 1.2E-6 score: 28.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 143..165 e-value: 4.8E-5 score: 21.3 coord: 233..259 e-value: 1.5E-4 score: 19.7 coord: 365..399 e-value: 1.6E-5 score: 22.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 115..138 e-value: 0.2 score: 12.0 coord: 143..167 e-value: 1.1E-6 score: 28.5 coord: 509..534 e-value: 0.45 score: 10.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 362..407 e-value: 2.4E-8 score: 34.0 coord: 261..309 e-value: 2.3E-7 score: 30.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 231..265 score: 10.500983
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 363..398 score: 9.284279
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 141..171 score: 9.119859
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 251..544 coord: 62..209
None	No IPR available	PANTHER	PTHR47928:SF110	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 251..544 coord: 62..209
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 463..494

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g018440.1	Lcy11g018440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding