Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGGTAGGGACTTGTTTAAAAAGGGCATGCGGTGGAGGGTTGGGAACGGGAGGCATATTATAATAGGAGATGACCCTTGGATAGCTGGAGTTAGCGGGTTCAAGCCTGTAGGTATGAAGGATAGCTTCAAGAAGAACTATGTGAGCTCTCTCATTGGTGCTGACAGCAGGTGGTTGGAAGATAAGATCAGAGATATCTTCATTCAATCAGATGTGGAAGCTATTCTGGATATTCCTTTAGGCAACTTACAGGCTAAGGACGACATCATTTGGGGCCATAACTCTAGAGGGAATTTTACTGTCAAAAGGGCTTATTTCCTTGCTCAACTGGGGGTCTCGGAAGAGAGAGTTTCCTCTTCGGACCAATCAGCCTCGAAAGCTTTGTGGAAGGACCTATGGAAGTCAAAAGCTTTACCCAGAGAGAAAAATTGCTCGTGGAAGGCTTTTCAGGACATTCTCCCTACTCAAACTAAAATCATTTCTAAAGGAATTGATATTAATCCCACATGTTTTCTTTGCAGGGATAAAAAGGAATCAAGGAGGTGTAGGGATAAAAACCCTAGCGCAGCGGAAACGTACAGAGACCTTAATCGGTTTAAATGCCGATTGGGAAACCAATACGACGGCAAAACAATTATACAGCAGAAAATTAAAGAATCATGCTGTAAAAATTGAAATAAAACATGCTTAAATAGCCCTAAAAACAATAGATCTAATCTATAAAGAATCCTATTGATCCTAGGGTTCAAGAATACTTACCCTTGAAGTTTTCTTGACAAGATTTCACCAAAATCCTTCGGTTCCACAGAAAAAACAGCAGCCAAGAACTCCTCTTCTTTGCTGGAGAATAATCACGAACACCACCACCACGATTGCACCGGTATTCTCTTAGGTGTGAATGTTGAGTGGCTTGTGGGAACCCAGATCTCTAAGGATTTTTCTCTGAAAAGACACTCTGTATTCACAGAGGGAGAGACGAACGAGAGAGAGGGCGAGAGAGAGGGAAAGAGGCGTGAGTTTGGGGAGTGTCGTCCTCAAAACTGAATATGACCCCTTCAAAAATAACCTCACGCATAATATCAGGTAACTGAAATATCAGTTACCTGATATTTTTAATTAATTATAAATTTAAAAATAATATTTTAAATTATAATTAATTAAATTTTAATTAATCAATATTAATTAAAATAACATTAATTTAAATCTTATTTAAATTAATATCCCTCTTAACCTATAGTTTAATTAAATCAAATTTAATTAAACTAAATCAATTAATTAATTCAAAATTAATTAATTTAAAAATAATAAAATTGAACATCATATATTCAATTATTATTATTCTCTCTCATAAAACTATAGTATTAATATACATCCAATGCACATTAATTATAACCTATAGTTTTAATATGAATCAAATTCATATTTTAGTTTAATATCCGAACCCCTTCGAATACTTAATTTAACCTTAGAAATTTACCTCAACGCCCTTATAGAGCTACCGATGGGACCTGATGGACCTACAGATCAGAAGCTCCAACGATATGAGATTAGTTGGTTAAACTCATTAACCAAGTTAATCAATATTCGTTAACTGTGGTTCACTCCACTAAAGAACCACAGCTGCACTCTTCTCACTGCAGATATATTTCTGTGTCCACGGATATCGACCGTCAACAGCAAGTTAGCCCTTCACGTGTGTTCGTACCCCAGCTAGGTCAAATTACCGTTTTACCCCTGGGCTACCTCTTGGTCCTTAAGTACCAGTGCTCCTCTAATGAACAACCTGTTTGTGGTCCAACCAGCAAACAGAAATCCCTCTCGTGCCATAAAGAGGGTAGGGCCCATTGTTCAAGACCCGGAGACACCACTTAAGGGAACACACCTCTACTTACCCTAATATCGGGAAGGAGTGAATTCCATCTTGTAAGACTACGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGGCGAACAGGCCACTCTCACCCGTACAAATCAAAGGACAATCCCTCATGGACAGGAGTCCATAATCCACTCAGGATTAAGGCCAAGTTGCCTAGGTCATCCTAGTGAAATAGAAACCGAGCTAACTAACGGTGTTACAGTTAGTGGTTAACTATTTCGCGGTCCGGTCTTTGTGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCAACCACATGAACGCGTTGGATCATTACGTTTGTATCAATATACAAAGCGGACCGTATCCATAGTGTCACCAGGACAAGGTACCCAGCCTTATCCCTATACTACAGACCCTTTAGGCTAAAACTTGAACATTGATCCCCGTATGTCCCTACATACTAGTTCAAGCCTCATTCTATTAGCCTTGGATGTTTAGTTTATTGGATTAGGGTTCATAAGACAAGATATAATACAAACATTGAATAATACATCAGTTTTATTAATGTTCGGTCAAATGTACATTTACTATCAACAAGTTTTAGGGCATAAAACCCAACAGGAGGCACATAATATGGGGTTGCAAGGTCTCAGGTAAGATCTGGTCCCACTTCTTCCCCTTCTTATGTATCTCTGATTTGGGTGGCAGGGAGGGAGATGATCCTAAAGCTTGCTGGGAGCAGGCGCGAAAGGTTTTTAACGAAGAAGATCGTGATTTGGCATTTCGGATATTTGGCACATTTGGTCCCTTAGAAACAGGGTTAACCATTCTAAGTCTAAGCTAGATCCTCAAGCGATTATCAGAGAAATCGAAATTTTGCAAGGGAACAGAACGCACCTCACGGAGTTCGGAGCTCCTTCAACCAGATGTGAGAGTCGGTCGAGTCAGGGGTCGTGGAGGCCTCCTCAGCAAGGTTGGTGGAAGATCAACACGGATGCTTCCTGGTCAGATTCCAAAAATGCAGGAGGTATTGGGTGGATTGCTCGTGACTCGGGTGGGTCTTTCATCTTCGCCAGAGGGAAAAAAATTAGCAGAAAGTGGGATATGAAATGCATGGAGTTGAAAGCGATTGTGGAAGGTCTCAGAAGCTTACTAATCAATATTGGTAGGCCTCTCCCGCGGATCCTCATCGAATCAGACTTCTCTGTTGCGATCGCCATTATGAATCATGAAGCTGAATAG
mRNA sequence
ATGTGGGGTAGGGACTTGTTTAAAAAGGGCATGCGGTGGAGGGTTGGGAACGGGAGGCATATTATAATAGGAGATGACCCTTGGATAGCTGGAGTTAGCGGGTTCAAGCCTGTAGGTATGAAGGATAGCTTCAAGAAGAACTATGTGAGCTCTCTCATTGGTGCTGACAGCAGGTGGTTGGAAGATAAGATCAGAGATATCTTCATTCAATCAGATGTGGAAGCTATTCTGGATATTCCTTTAGGCAACTTACAGGCTAAGGACGACATCATTTGGGGCCATAACTCTAGAGGGAATTTTACTGTCAAAAGGGCTTATTTCCTTGCTCAACTGGGGGTCTCGGAAGAGAGAGTTTCCTCTTCGGACCAATCAGCCTCGAAAGCTTTGTGGAAGGACCTATGGAAGTCAAAAGCTTTACCCAGAGAGAAAAATTGCTCGTGGAAGGCTTTTCAGGACATTCTCCCTACTCAAACTAAAATCATTTCTAAAGGAATTGATATTAATCCCACATGGAGGGAGATGATCCTAAAGCTTGCTGGGAGCAGGCGCGAAAGGGTTAACCATTCTAAGTCTAAGCTAGATCCTCAAGCGATTATCAGAGAAATCGAAATTTTGCAAGGGAACAGAACGCACCTCACGGAGTTCGGAGCTCCTTCAACCAGATGTGAGAGTCGGTCGAGTCAGGGGTCGTGGAGGCCTCCTCAGCAAGGTTGGTGGAAGATCAACACGGATGCTTCCTGGTCAGATTCCAAAAATGCAGGAGGTATTGGGTGGATTGCTCGTGACTCGGGTGGGTCTTTCATCTTCGCCAGAGGGAAAAAAATTAGCAGAAAGTGGGATATGAAATGCATGGAGTTGAAAGCGATTGTGGAAGGTCTCAGAAGCTTACTAATCAATATTGGTAGGCCTCTCCCGCGGATCCTCATCGAATCAGACTTCTCTGTTGCGATCGCCATTATGAATCATGAAGCTGAATAG
Coding sequence (CDS)
ATGTGGGGTAGGGACTTGTTTAAAAAGGGCATGCGGTGGAGGGTTGGGAACGGGAGGCATATTATAATAGGAGATGACCCTTGGATAGCTGGAGTTAGCGGGTTCAAGCCTGTAGGTATGAAGGATAGCTTCAAGAAGAACTATGTGAGCTCTCTCATTGGTGCTGACAGCAGGTGGTTGGAAGATAAGATCAGAGATATCTTCATTCAATCAGATGTGGAAGCTATTCTGGATATTCCTTTAGGCAACTTACAGGCTAAGGACGACATCATTTGGGGCCATAACTCTAGAGGGAATTTTACTGTCAAAAGGGCTTATTTCCTTGCTCAACTGGGGGTCTCGGAAGAGAGAGTTTCCTCTTCGGACCAATCAGCCTCGAAAGCTTTGTGGAAGGACCTATGGAAGTCAAAAGCTTTACCCAGAGAGAAAAATTGCTCGTGGAAGGCTTTTCAGGACATTCTCCCTACTCAAACTAAAATCATTTCTAAAGGAATTGATATTAATCCCACATGGAGGGAGATGATCCTAAAGCTTGCTGGGAGCAGGCGCGAAAGGGTTAACCATTCTAAGTCTAAGCTAGATCCTCAAGCGATTATCAGAGAAATCGAAATTTTGCAAGGGAACAGAACGCACCTCACGGAGTTCGGAGCTCCTTCAACCAGATGTGAGAGTCGGTCGAGTCAGGGGTCGTGGAGGCCTCCTCAGCAAGGTTGGTGGAAGATCAACACGGATGCTTCCTGGTCAGATTCCAAAAATGCAGGAGGTATTGGGTGGATTGCTCGTGACTCGGGTGGGTCTTTCATCTTCGCCAGAGGGAAAAAAATTAGCAGAAAGTGGGATATGAAATGCATGGAGTTGAAAGCGATTGTGGAAGGTCTCAGAAGCTTACTAATCAATATTGGTAGGCCTCTCCCGCGGATCCTCATCGAATCAGACTTCTCTGTTGCGATCGCCATTATGAATCATGAAGCTGAATAG
Protein sequence
MWGRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNYVSSLIGADSRWLEDKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVSSSDQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPTWREMILKLAGSRRERVNHSKSKLDPQAIIREIEILQGNRTHLTEFGAPSTRCESRSSQGSWRPPQQGWWKINTDASWSDSKNAGGIGWIARDSGGSFIFARGKKISRKWDMKCMELKAIVEGLRSLLINIGRPLPRILIESDFSVAIAIMNHEAE
Homology
BLAST of Lcy11g017950 vs. ExPASy TrEMBL
Match:
A0A803PVI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 2.0e-29
Identity = 100/363 (27.55%), Postives = 156/363 (42.98%), Query Frame = 0
Query: 1 MWGRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNYVSSLIGADSRWL 60
+WG++L KG+RW+VG+G++I+ DPWI G + FKP+ + YVSS I AD RW
Sbjct: 791 VWGKELLVKGLRWKVGDGQNILFASDPWIPGFTNFKPLQSVVTSTNQYVSSFITADRRWN 850
Query: 61 EDKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVSS 120
+ + D F+ SDVE +L IPL A D +IW + G +TVK Y LA EE++ +
Sbjct: 851 LELLYDTFLISDVEKVLQIPLSIFPASDQLIWNFETNGAYTVKSGYALAT--SLEEQMPN 910
Query: 121 SDQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINP----------- 180
+ + W W + + W+A D LPT + + I +P
Sbjct: 911 ASGLQCQTWWNKFWSLTLPSKVRIFLWRAINDCLPTAATLHHRHIADSPICLLCQNARET 970
Query: 181 -------------TWREMILKLAGSRRERVNHSKSKLDPQAIIREIEILQ---------- 240
WR+ L+ E + + L + ++I Q
Sbjct: 971 TQHALFYCKRPRKIWRDSSFTLSPMISEYMTIKELMLQVSDLWSNLQIEQFITILWLIWN 1030
Query: 241 -------GNRT---HLTEFGAPSTRCESRSSQ--------------------GSWRPPQQ 300
G++T +L E+ A S + +++Q SW P
Sbjct: 1031 ERNKEKHGHKTKPYNLLEYSALSYLEDYQAAQRKKPATTPAASHNNLHQKQDASWLHPPT 1090
BLAST of Lcy11g017950 vs. ExPASy TrEMBL
Match:
B8BN96 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37529 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 1.7e-28
Identity = 102/337 (30.27%), Postives = 149/337 (44.21%), Query Frame = 0
Query: 2 WGRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNYVSSLIGADSRWLE 61
+G DL KKG+ WRVGNG I I D W+ +P+ K + + +VS LI D W
Sbjct: 1370 YGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDV 1429
Query: 62 DKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVSSS 121
KI F D E IL+I + + +D I W + G F+V+ AY LA V+ E SSS
Sbjct: 1430 PKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSS 1489
Query: 122 DQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPTWREMILKLAGS 181
+ W+ +WK K + K +W+ + L T + WR +
Sbjct: 1490 GTNNINKAWEMIWKCKVPQKVKIFAWRVASNCLATMAMFLM------TLWRNWYV----- 1549
Query: 182 RRERVNHSKSKLDPQAIIREI--------EILQGNRTHLTE----------FGAPSTRCE 241
R + H KS + R I +I Q + L + G P R
Sbjct: 1550 -RNELIHGKSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRV- 1609
Query: 242 SRSSQGSWRPPQQGWWKINTDASWSDSKNAGGIGWIARDSGGSFIFARGKKISRKWDMKC 301
+ Q W P+ GW K+N D S+ S GG+G I R+S G IF K + R +
Sbjct: 1610 LNNHQPCWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLE 1669
Query: 302 MELKAIVEGLRSLLINIGRPLPRILIESDFSVAIAIM 321
EL+A VEGL+ + I L I +E+D + + ++
Sbjct: 1670 SELRACVEGLK---LAIHWTLLPIQVETDCASVVQLL 1690
BLAST of Lcy11g017950 vs. ExPASy TrEMBL
Match:
A0A803NU77 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 135.2 bits (339), Expect = 4.9e-28
Identity = 88/299 (29.43%), Postives = 136/299 (45.48%), Query Frame = 0
Query: 1 MWGRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNYVSSLIGADSRWL 60
+WG++L KG+RW+VG+G I+ DPWI G++ FKP+ + VSSLI + +W
Sbjct: 1232 VWGKELLLKGLRWKVGDGHSILCVSDPWIPGITNFKPLQSAGTTINQQVSSLITPERQWN 1291
Query: 61 EDKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVSS 120
+ + F+ SDV+ IL IPL A D +IW + + G +TVK Y LA EE++ +
Sbjct: 1292 LELLHATFLNSDVDKILQIPLTIFPAGDQLIWHYETNGAYTVKSGYALAT--SLEEQLPT 1351
Query: 121 SDQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPTWREMILKLAG 180
S+ W W + + W+A D LPT + + +P M L
Sbjct: 1352 VSGLQSQNWWNKFWSLTLPSKVRIFLWRAINDCLPTAATLHHRHNADSP----MCLLCQN 1411
Query: 181 SRRERVNHSKSKLDPQAIIREIEILQGNRTHLTEFGAPSTRCESRSSQGSWRPPQQGWWK 240
+ + + S P A S R + + SW P G K
Sbjct: 1412 ANFQAAQKNNSATAP---------------------AVSPRNLQQQQEASWLNPPTGRLK 1471
Query: 241 INTDASWSDSKNAGGIGWIARDSGGSFIFARGKKISRKWDMKCMELKAIVEGLRSLLIN 300
+NTDA+ + G G I R+S G + A K + + + ME A++ GL+ L+ N
Sbjct: 1472 LNTDAAINKETQTTGCGAILRNSDGEVVAAFSKPVIGSFRPEVMEALALMYGLQWLIDN 1503
BLAST of Lcy11g017950 vs. ExPASy TrEMBL
Match:
A0A7N2L6Z9 (Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 7.1e-27
Identity = 117/377 (31.03%), Postives = 165/377 (43.77%), Query Frame = 0
Query: 5 DLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNY--VSSLIGADSRWLE- 64
++ KKG RWRVGNGR I I DD W+ S +K + ++Y VSSLI D+RW +
Sbjct: 795 EVLKKGTRWRVGNGRRIHIWDDKWLPSPSTYKVI-TPPRITEDYPMVSSLIDPDTRWWKI 854
Query: 65 DKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLA-QLGVSEERVSS 124
D IR +F+ D EAIL IPL D IIW N +G F+VK AYF+A L S E V
Sbjct: 855 DSIRALFLPVDAEAILKIPLSFNLPDDRIIWIGNKKGEFSVKSAYFVAVNLLESAEIVEC 914
Query: 125 SDQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDIN------------ 184
S LWK+LWK + K +W+A + LPT + +G++ N
Sbjct: 915 SSGDPFLPLWKNLWKLDLPEKVKIFAWRACLNGLPTMANMHMRGLNANIFCPVCDEEVEC 974
Query: 185 ---------------PTWREMILKLAGSRRE---RVNHSKSKLDPQ------AIIREIEI 244
W++ L L R+ H + P+ AI I
Sbjct: 975 LNHCLLTCDFALSVWALWQDCPLGLLLESRDIKALALHFLANSPPRHLLIFFAISWAIWH 1034
Query: 245 LQGNRTHLTEFGAPSTRCE-------------------SRSSQGSWRPPQQGWWKINTDA 304
+ R H + +P E +S+ W P G +K+N D
Sbjct: 1035 NRNLRVHDEDCLSPLQTWEMAQRLIDDYHGAIKLDFPPMQSTLRGWSAPPPGVFKVNVDG 1094
Query: 305 SWS-DSKNAGGIGWIARDSGGSFIFARGKKISRKWDMKCMELKAIVEGLRSLLINIGRPL 322
+ S D + G+G + RD G I A K + + + EL AI +G LL+ L
Sbjct: 1095 ACSIDPVGSSGVGVVIRDESGMVIAALCKLLPSYFPAEWTELFAIEQG---LLLAQEMDL 1154
BLAST of Lcy11g017950 vs. ExPASy TrEMBL
Match:
A0A803QEG9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 1.6e-26
Identity = 104/396 (26.26%), Postives = 161/396 (40.66%), Query Frame = 0
Query: 2 WGRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNYVSSLIGADSRWLE 61
WGR+L G+RW++G GR + G DPW+ G S F P+ V++LI + +W
Sbjct: 1423 WGRELLAHGLRWKIGEGRTVRSGFDPWLPGHSSFLPITYSGP-PNGVVANLITDERQWNI 1482
Query: 62 DKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVSSS 121
++ F D+E IL +PL +D +IW H+S GNFTV+ AY LA + E +SSS
Sbjct: 1483 PLLQQYFCPLDIEKILTLPLSFFPTRDKLIWHHHSSGNFTVQSAYHLA-TSLENEDLSSS 1542
Query: 122 DQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPT----------- 181
SA + WK W + + K +W+ D LP T ++ + I + T
Sbjct: 1543 STSAVQ-WWKHFWSLQIPQKVKIFAWRVIHDALPVATSLVRRKIITDSTCSICKQAWEST 1602
Query: 182 -------------WREM-----------------------------------ILKLAGSR 241
WR I+
Sbjct: 1603 GHALFGCKYAKAVWRSFHFNFNWSAAISMKNGDYLMYLSSIYNKAEMEELFCIMWAIWGE 1662
Query: 242 RERVNHSKS--KLDPQAIIREI-----------EILQGNRTHLTEFGAPSTRCE----SR 301
R +V H K+ + + A+ + + T+ PS + +
Sbjct: 1663 RNKVVHGKNARRANDLAVFATVFLQNFRAAQHKPVAAATAPAATDVAGPSQQPSKPPAAT 1722
Query: 302 SSQGSWRPPQQGWWKINTDASWSDSKNAGGIGWIARDSGGSFIFARGKKISRKWDMKCME 322
++ SWRPP +K+NTDA+ +S N G+G + RD+ GS A I + ME
Sbjct: 1723 AALSSWRPPAADCYKLNTDAAAENSSNTIGVGAVLRDASGSVTGALAMPIIGNFKSHEME 1782
BLAST of Lcy11g017950 vs. NCBI nr
Match:
XP_030486845.1 (uncharacterized protein LOC115703751 [Cannabis sativa])
HSP 1 Score: 142.1 bits (357), Expect = 8.3e-30
Identity = 99/301 (32.89%), Postives = 137/301 (45.51%), Query Frame = 0
Query: 2 WGRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPV---GMKDSFKKNYVSSLIGADSR 61
WG+DL KG+RW+VG+G+ I+ DPW+ GV+ F+P+ G+ D K VSSLI A+
Sbjct: 925 WGKDLLSKGLRWKVGDGQSILCKSDPWLPGVTNFRPLVLAGIDDHIK---VSSLITAERY 984
Query: 62 WLEDKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERV 121
W + + FI SDVE IL IPL D +IW H G +TVK YF+A EE+
Sbjct: 985 WNLNLLNSYFIPSDVERILSIPLTLTPCSDALIWHHEHNGCYTVKSGYFMAT--NLEEQQ 1044
Query: 122 SSSDQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPTWREMILKL 181
S + S+ WK W+ + + W+A D LP + K I +P I L
Sbjct: 1045 PSISGTQSQQWWKKFWRLSLPSKVRIFLWRAINDCLPATAVLHHKHIAQSP-----ICPL 1104
Query: 182 AGSRRERVNH--------------SKSKLDPQAIIREIEILQGNRTHLTEFGAPSTRCES 241
E + H S LD + +E + Q ++ PS S
Sbjct: 1105 CQRDSESILHALFYCHRPRKIWKDSSFSLDNILLSKEYQSAQKSK------APPSLSSPS 1164
Query: 242 RSS---QGSWRPPQQGWWKINTDASWSDSKNAGGIGWIARDSGGSFIFARGKKISRKWDM 283
RS W P G K+NTDA+ S G G + RDS G + A K I + +
Sbjct: 1165 RSMTAFDAPWLNPPSGKLKLNTDAAVDKSNQRTGCGAVLRDSNGDIVAAFSKSIPGFFGL 1209
BLAST of Lcy11g017950 vs. NCBI nr
Match:
EEC68887.1 (hypothetical protein OsI_37529 [Oryza sativa Indica Group])
HSP 1 Score: 136.7 bits (343), Expect = 3.5e-28
Identity = 102/337 (30.27%), Postives = 149/337 (44.21%), Query Frame = 0
Query: 2 WGRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNYVSSLIGADSRWLE 61
+G DL KKG+ WRVGNG I I D W+ +P+ K + + +VS LI D W
Sbjct: 1370 YGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDV 1429
Query: 62 DKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVSSS 121
KI F D E IL+I + + +D I W + G F+V+ AY LA V+ E SSS
Sbjct: 1430 PKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSS 1489
Query: 122 DQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPTWREMILKLAGS 181
+ W+ +WK K + K +W+ + L T + WR +
Sbjct: 1490 GTNNINKAWEMIWKCKVPQKVKIFAWRVASNCLATMAMFLM------TLWRNWYV----- 1549
Query: 182 RRERVNHSKSKLDPQAIIREI--------EILQGNRTHLTE----------FGAPSTRCE 241
R + H KS + R I +I Q + L + G P R
Sbjct: 1550 -RNELIHGKSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRV- 1609
Query: 242 SRSSQGSWRPPQQGWWKINTDASWSDSKNAGGIGWIARDSGGSFIFARGKKISRKWDMKC 301
+ Q W P+ GW K+N D S+ S GG+G I R+S G IF K + R +
Sbjct: 1610 LNNHQPCWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLE 1669
Query: 302 MELKAIVEGLRSLLINIGRPLPRILIESDFSVAIAIM 321
EL+A VEGL+ + I L I +E+D + + ++
Sbjct: 1670 SELRACVEGLK---LAIHWTLLPIQVETDCASVVQLL 1690
BLAST of Lcy11g017950 vs. NCBI nr
Match:
KAG8387873.1 (hypothetical protein BUALT_Bualt02G0066800 [Buddleja alternifolia])
HSP 1 Score: 134.8 bits (338), Expect = 1.3e-27
Identity = 101/353 (28.61%), Postives = 164/353 (46.46%), Query Frame = 0
Query: 4 RDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKN-YVSSLIGADSRWLE- 63
R + K+G RWRVGNG I I DPW+ SGFK N V+SLI ++ W +
Sbjct: 72 RHIVKQGSRWRVGNGEDIAIWFDPWLPSTSGFKITTRNRLLPMNAKVNSLINPNTGWWDS 131
Query: 64 DKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVSSS 123
D I +F D I IPLG+ +D +IW +S G F V+ AY LA+ SSS
Sbjct: 132 DLIDRVFCPEDASIIKTIPLGSNNNRDRLIWNFSSSGFFAVRSAYHLAKDIDRRRAASSS 191
Query: 124 DQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPTWR--------- 183
+ W+ +WK++ P+ + +WKA +D LPT ++++ +++ +
Sbjct: 192 NPKPPSLSWQFIWKTRVPPKIRVFAWKACKDALPTAANLLNRRVEVYAGCQHCESEREDL 251
Query: 184 EMILKLAGSRRE-----RVNHSKSKLDPQAIIREIEILQGNRTHLTEF-----GAPSTRC 243
+ +L+ R+ + H + + I ++++ N H+ T
Sbjct: 252 QHVLRCCPFSRQLWALMGLPHHTISRNSETIELNQKVMENNNIHMESLITMIQSFHMTAH 311
Query: 244 ESRSSQGS---------WRPPQQGWWKINTD-ASWSDSKNAGGIGWIARDSGGSFIFARG 303
+ ++G+ W PP GW KIN D A++S+ K+ G+G IARDS G + +
Sbjct: 312 QIEPNRGAQIIDTTVMHWSPPAPGWLKINFDGANFSEPKSI-GLGVIARDSEGECLHWQR 371
Query: 304 KKISRKWDMKCMELKAIVEGLRSLLINIGRPLPRILIESDFSVAIAIMNHEAE 326
K + + E A VEGL+ +N R +++E D I +N +E
Sbjct: 372 KFLPYHASAEVGEGLACVEGLQLASLNGWR---NVILEGDCLSLIQKINSPSE 420
BLAST of Lcy11g017950 vs. NCBI nr
Match:
XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])
HSP 1 Score: 131.3 bits (329), Expect = 1.5e-26
Identity = 101/386 (26.17%), Postives = 165/386 (42.75%), Query Frame = 0
Query: 1 MWGRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNYVSSLIGADSRWL 60
MWGR + KKGMRWR+GNG+ I I D W+ F+P+ + V+ LI AD++W
Sbjct: 947 MWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLPVSSVVADLIKADNQWD 1006
Query: 61 EDKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVSS 120
E K+R F+ D IL IPL +A+D+++W ++ RGN++VK Y LA S+ S+
Sbjct: 1007 EIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQLALR--SKFPDST 1066
Query: 121 SDQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPTWREMILKLAG 180
S AS W LW + + K W+A ++LP+ + + + PT + L +
Sbjct: 1067 SCTEASHKYWSALWTLELPEKLKIFMWRASNNLLPSAENLWKRKVVEEPTCKRCKLSV-- 1126
Query: 181 SRRERVNHS----------------------------------------KSKLDPQAII- 240
E ++H+ KS L+ +
Sbjct: 1127 ---ETISHALLECKAARKIWLQSPFSAPRLEANSQDIFSTLQNMAKELRKSDLELMVALC 1186
Query: 241 ------REIEILQGNRTH-----------LTEFGAPSTRCES------RSSQGSWRPPQQ 300
R I G + LT F +S + Q W PP Q
Sbjct: 1187 WSAWYARNKCIFDGRELNPIISAAKAESVLTAFQRVRKPQQSHISISIKEKQQEWLPPPQ 1246
Query: 301 GWWKINTDASWSDSKNAGGIGWIARDSGGSFIFARGKKISRKWDMKCMELKAIVEGLRSL 323
+K+N DA+++ + G+G + RDS G + A + K E +A++ GL+
Sbjct: 1247 NVFKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAGVNQNLLKGSASLAEAEAVLWGLQ-- 1306
BLAST of Lcy11g017950 vs. NCBI nr
Match:
XP_023915006.1 (uncharacterized protein LOC112026546 [Quercus suber])
HSP 1 Score: 129.4 bits (324), Expect = 5.6e-26
Identity = 107/375 (28.53%), Postives = 162/375 (43.20%), Query Frame = 0
Query: 5 DLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKK-NYVSSLIGADSRWLE-D 64
++ ++G RWRVGNGR I I DD W+ + K + + F VSSLI DS+W + D
Sbjct: 64 EIIRRGTRWRVGNGRRIQIWDDKWLPTPTTHKVISPQSDFGDFPMVSSLIDHDSKWWKVD 123
Query: 65 KIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLA-QLGVSEERVSSS 124
+R IF+ + ++IL IPL +D ++W N +G+FTVK AY++A + S E SS
Sbjct: 124 VVRSIFLPFEADSILKIPLSYNLPEDCLVWVGNKKGSFTVKSAYYIASSILDSNEDGESS 183
Query: 125 DQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDIN------------- 184
+ LWK +W K P+ K +W+ + LPT + +G+ +
Sbjct: 184 SSNEMTGLWKRIWHQKIPPKLKIFAWRLCVNGLPTMFNLSHRGVHCSCFCPLCDKAIETT 243
Query: 185 --------------PTWREMILKLAGSRRERV--------NHSKSKLDPQAIIREIEILQ 244
W L+ +E V N S S L+ +
Sbjct: 244 AHALLHCDHAKLTWAHWHNGFAVLSAGTQEPVDIALDIIKNDSSSALELFIAVAWSIWWN 303
Query: 245 GNRTHLTEFGAPSTR---------------CESR-----SSQGSWRPPQQGWWKINTDAS 304
N+ GAP ++ C SS +WRPP G+ KIN D +
Sbjct: 304 RNQALHEGSGAPPSQIWDMAIRILGEYKEACSFSNLPLVSSLINWRPPPAGFTKINVDGA 363
Query: 305 WSDSKNAGGIGWIARDSGGSFIFARGKKISRKWDMKCMELKAIVEGLRSLLINIGRPLPR 322
SD G I RDS GS I A + +S + E A+ +G+ L + +G L +
Sbjct: 364 ASDDGRPSSTGVIIRDSQGSSIAASCRVLSSPFPADISEALALQDGV-MLALELG--LSK 423
BLAST of Lcy11g017950 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 77.4 bits (189), Expect = 2.3e-14
Identity = 49/171 (28.65%), Postives = 85/171 (49.71%), Query Frame = 0
Query: 3 GRDLFKKGMRWRVGNGRHIIIGDDPWIAGVSGFKPVGMKDSFKKNYVSSLI---GADSRW 62
G L KKG R +G+G++I IG D I +P+ ++++K+ +++L G+ W
Sbjct: 30 GIALLKKGTRHLIGDGQNIRIGLDN-IVDSHPPRPLNTEETYKEMTINNLFERKGSYYFW 89
Query: 63 LEDKIRDIFIQSDVEAILDIPLGNLQAKDDIIWGHNSRGNFTVKRAYFLAQLGVSEERVS 122
+ KI QSD I I L + D IIW +N+ G +TV+ Y+L S +
Sbjct: 90 DDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPA 149
Query: 123 SSDQSASKALWKDLWKSKALPREKNCSWKAFQDILPTQTKIISKGIDINPT 171
+ S L +W +P+ K+ W+A L T ++ ++G+ I+P+
Sbjct: 150 INPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPS 199
BLAST of Lcy11g017950 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 61.2 bits (147), Expect = 1.7e-09
Identity = 47/165 (28.48%), Postives = 83/165 (50.30%), Query Frame = 0
Query: 168 NPTWRE-------MILKLAGSRRERVNHSKSKLDPQAIIREIEILQGNRTHLTEFGAPST 227
NP W + ++ +L +R E V + + + Q ++R E TE + T
Sbjct: 350 NPQWEKASQLVPWLLWRLWKNRNELVFRGR-EFNAQEVLRRAEDDLEEWRIRTEAESCGT 409
Query: 228 RCE-SRSSQGSWRPPQQGWWKINTDASWSDSKNAGGIGWIARDSGGSFIFARGKKISRKW 287
+ + +RSS G WRPP W K NTDA+W+ GIGW+ R+ G + + + +
Sbjct: 410 KPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPK-- 469
Query: 288 DMKCMELKAIVEGLRSLLINIGR-PLPRILIESDFSVAIAIMNHE 324
+K + L+A +E +R ++++ R ++ ESD V I I+N++
Sbjct: 470 -LKSV-LEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNND 509
BLAST of Lcy11g017950 vs. TAIR 10
Match:
AT5G19270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03566.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 45.4 bits (106), Expect = 9.9e-05
Identity = 33/113 (29.20%), Postives = 51/113 (45.13%), Query Frame = 0
Query: 208 NRTHLTEFGAPSTRCESRSSQGSWRPPQQGWWKINTDASWSDSKNAGGIGWIARDSGGSF 267
N + +GA R S +W PP G K N +A W ++ G+ WIARD G
Sbjct: 40 NARQIDTYGACFVR--GTSLDLNWTPPDFGIVKCNVNAHWGNADMMSGVAWIARDVNGLA 99
Query: 268 IFARGKKISRKWDMKCMELKAIVEGLRSLLINIGRPLPRILIESDFSVAIAIM 321
++ +R + EL+ I+ ++SL L ++I SD AIA +
Sbjct: 100 LYHARDAFTRSSNRIMAELRCILWVVKSLR---DLRLQNVIISSDCQAAIAAL 147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803PVI9 | 2.0e-29 | 27.55 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
B8BN96 | 1.7e-28 | 30.27 | Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX... | [more] |
A0A803NU77 | 4.9e-28 | 29.43 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A7N2L6Z9 | 7.1e-27 | 31.03 | Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 ... | [more] |
A0A803QEG9 | 1.6e-26 | 26.26 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_030486845.1 | 8.3e-30 | 32.89 | uncharacterized protein LOC115703751 [Cannabis sativa] | [more] |
EEC68887.1 | 3.5e-28 | 30.27 | hypothetical protein OsI_37529 [Oryza sativa Indica Group] | [more] |
KAG8387873.1 | 1.3e-27 | 28.61 | hypothetical protein BUALT_Bualt02G0066800 [Buddleja alternifolia] | [more] |
XP_024950112.1 | 1.5e-26 | 26.17 | uncharacterized protein LOC112496847 [Citrus sinensis] | [more] |
XP_023915006.1 | 5.6e-26 | 28.53 | uncharacterized protein LOC112026546 [Quercus suber] | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 2.3e-14 | 28.65 | Ribonuclease H-like superfamily protein | [more] |
AT4G29090.1 | 1.7e-09 | 28.48 | Ribonuclease H-like superfamily protein | [more] |
AT5G19270.1 | 9.9e-05 | 29.20 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |