Lcy11g017770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g017770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CML13
Location	Chr11: 43822164 .. 43824970 (-)
RNA-Seq Expression	Lcy11g017770
Synteny	Lcy11g017770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAAGATCTGAGCGATGACCAGAAATCCTCCATGAGAGAGGCCTTCACCCTCTTCGATACCGACGGCGACGGCCGGATCGCCCCGTCGGAGCTCGGGATTCTAATGCGTTCTCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATCATCGCCGAGGAGAATCTCACTTCTCCCTTTGATTTCAATCGCTTCCTCGAGATCATGTCCAAGCACATGAAGCCCGAGCCCTTCGATCGCCAGCTTCGCGACGCCTTCAAGGTTCTCGATAAGGACAACACCGGCTACGTCCTGGTCTCGGAGCTCCGACACATTTTGACGAGTATAGGTGAGAAGCTGGAGCCCTCGGAGTTTGATGAGTGGATTCGAGAAGTGGAGGTCGGATCGGATGGTAGAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGAGGAGAGAAGTAATGGAAAATTGGTTTTGTGTGCTTTACTCGAATGCTTTCTGAAGTAATTTGTGGCGATCTTTGTTGTTTTTTTTCTTTTTTTTTTTTTTCCTTTCTGTTAATTGGTTTCAGATTACAAGACTTGCTTGGATTTTGGTGGGATGGATGCGGGTGATGTTCGCATACTTTCCCAAGTAATGCTAATATTATTTGGAAAGATTTAGGATTATGATGGGATGGATATGTTTGGTTGGATTCGAGGTGTATTGAAAACTGTGGTTTTCTGGGTAACGTAGAATCTGGTGATTTGTACGTGTTTCTTAGCTTAAATTCCAAAAAATGATTAGTTTCTTCCACGATTTACTGTCTTGCGCTGGTTGATATTACTCCGGGCTCTTTAAGTTAGAGAGACGGAGATGGTTGTCTTTATGTTCACCATGCCTTGTTTAGTTTGTAAGATTTGAACGATTAATTAATCTTCTCCTTTTTCATTTGGTTTAGCCTTTTCTTTCTATGTTAGCCTCATGAGTTGAGAGACCTGATTGCATATGTTTTATCTTTAAATCCTTCTGATATATTTTAGGTGTCGTAGGATTAGTTATATTGTATGTGTTCAAGATGTGTAAGGAATCCATTGCTACAATGTAAGAGTTTCTGATGCAATGAATTGAGTCAAAACATGGGCATTGAAAGCTTGGTTCTAGATTCCATTTTTTATTCGAAGTACTTTCTTTTCAAAAAGGATATATATAGTGTTTGCTCATGTTATATCCCTCTCAATTTGTTGTTTAAGAGATCTTCAATTTGTGGGCAGGATATACAGATGCTTTTAAAACTTACACCTCTCTGTATTTGAGATACTTCACAGTCAAATTTGAGATGAAAAGAGTAATGGTTTTAGTTGTAAGGCTGTGAGGCTACAGGAAATCATTTGCAAACCTTGTGTTTTCTCTTTTTCCATATAGTGTTTTACATTCTTTTTGTTTTCAGTTCTGAAGAAACGTTGTAGTTTGTAAATTTTAGTATTGATTTACCACAGGATCATCGTTTGGCTCTCTGTTGGAATTCTGTGCGGTCCTTACATTTATAGTGAACAAGATTTTGGAGGTTCTAAGTTGTCTTCATTGGATATCAGGGTGAGGTTCAGTTTAACATGTAGCTGTTTGGAATACTCCATTCCTAGTATGTTAAATTCATATACCAACTTATGAGAGTCTATGGTCTTTTGCCTTGAAAAAACATATGCTTTGGAAGTTCATAGCCATGTTTTATAAGCAAATTAATGGATCTTTTAAGTAGATAGAAGGAATAGAAAATTAAATAGAGTCCTTGCTTTAAAAATTTTAGTAACCTTTGTACTTTTTGGGAATTAGTCCTGAACTTATAACTAGTATTGGTTAAGATCTCTCCAAACATGGGGAGGGGTATATAGATTGGAGGCATTTTTATCTATTATGTAAAACTTTAAGTATGATCTTGTAAAACATTATCTGCATTTTATGAATATCAAGAAACAGAGCTGGGCTGTTTGATCATGTCAATGTTTGATCATGTCAATGACTCTTTAGGTTGATCAATATACTCCAGTCAGGTATAGTCGGGTATAAAGCTTCCGTTTTGAGTTGATAGACCAACGGGAGATCTCTAGTTATAAATTTAATGATCACTTTTTTACCACTGATCAAAGTTTTGAGTATAGCGGGTGGATTCTCGATTATTCGAGGACTTCCTCGTAAAAATTATAGACTTAGCATCTTAGCAGAAATCCTGTACTTCATGACAATCTGACCAGGAGTATTTGGACAGGAAACCACTCCAACCACACACACACACACAGCTCTTAACTACTTTTTGTGGTTTCTTAACCTTGGAAGGCATTAATGTTGAAGTCAAAGTATGAATCTGCCCATTTTTCTCTCTTCCCATCATCTGTGTTAACCAACTTCTCCTCCACTGCTCTATTTGCTTAAGCTGGAACTATCTCAAGATTTTTGGCCTCACATAGCTTTTCATGTTTTTCTTTTCCTGGCAAAGTTAAGGGTTTTATGGTGTAATGTGAGCAAAGCTCTTCCCTCCGTATGCCTTTTGTTCAACTTGTCTGATCAATCTCAATTGGAAGGTTTACTTTTGTAATCTTCCTTTGGGTCTGTGAAACATTTTTCCCCAGTTGTTTAACATATATCTGGGTTATTGTTGATCATGGAAGATGATAAAGTGGCATGTAATTGAATTTATTTTCACTTTGTATGAAAATTCTCATTTACTTTAGGCTCCACAAGGATTGAAGGGACTATATCTGCTAGCTTATCGTCAGTGCTAATCATATGTGCTGCTTATTTCTTTGACCAGTTTAGTTGGCTGCCTTGTGTGTAG

mRNA sequence

ATGGGCAAAGATCTGAGCGATGACCAGAAATCCTCCATGAGAGAGGCCTTCACCCTCTTCGATACCGACGGCGACGGCCGGATCGCCCCGTCGGAGCTCGGGATTCTAATGCGTTCTCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATCATCGCCGAGGAGAATCTCACTTCTCCCTTTGATTTCAATCGCTTCCTCGAGATCATGTCCAAGCACATGAAGCCCGAGCCCTTCGATCGCCAGCTTCGCGACGCCTTCAAGGTTCTCGATAAGGACAACACCGGCTACGTCCTGGTCTCGGAGCTCCGACACATTTTGACGAGTATAGGTGAGAAGCTGGAGCCCTCGGAGTTTGATGAGTGGATTCGAGAAGTGGAGGTCGGATCGGATGGTAGAATTCGGATCATCGTTTGGCTCTCTGTTGGAATTCTGTGCGGTCCTTACATTTATAGTGAACAAGATTTTGGAGGTTCTAAGTTGTCTTCATTGGATATCAGGGTGAGGTTCAGTTTAACATGTAGCTGTTTGGAATACTCCATTCCTAGCTCCACAAGGATTGAAGGGACTATATCTGCTAGCTTATCGTCAGTGCTAATCATATGTGCTGCTTATTTCTTTGACCAGTTTAGTTGGCTGCCTTGTGTGTAG

Coding sequence (CDS)

ATGGGCAAAGATCTGAGCGATGACCAGAAATCCTCCATGAGAGAGGCCTTCACCCTCTTCGATACCGACGGCGACGGCCGGATCGCCCCGTCGGAGCTCGGGATTCTAATGCGTTCTCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATCATCGCCGAGGAGAATCTCACTTCTCCCTTTGATTTCAATCGCTTCCTCGAGATCATGTCCAAGCACATGAAGCCCGAGCCCTTCGATCGCCAGCTTCGCGACGCCTTCAAGGTTCTCGATAAGGACAACACCGGCTACGTCCTGGTCTCGGAGCTCCGACACATTTTGACGAGTATAGGTGAGAAGCTGGAGCCCTCGGAGTTTGATGAGTGGATTCGAGAAGTGGAGGTCGGATCGGATGGTAGAATTCGGATCATCGTTTGGCTCTCTGTTGGAATTCTGTGCGGTCCTTACATTTATAGTGAACAAGATTTTGGAGGTTCTAAGTTGTCTTCATTGGATATCAGGGTGAGGTTCAGTTTAACATGTAGCTGTTTGGAATACTCCATTCCTAGCTCCACAAGGATTGAAGGGACTATATCTGCTAGCTTATCGTCAGTGCTAATCATATGTGCTGCTTATTTCTTTGACCAGTTTAGTTGGCTGCCTTGTGTGTAG

Protein sequence

MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTSPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEFDEWIREVEVGSDGRIRIIVWLSVGILCGPYIYSEQDFGGSKLSSLDIRVRFSLTCSCLEYSIPSSTRIEGTISASLSSVLIICAAYFFDQFSWLPCV

Homology

[Close]

BLAST of Lcy11g017770 vs. ExPASy Swiss-Prot
Match: Q94AZ4 (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana OX=3702 GN=CML13 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-61
Identity = 114/137 (83.21%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MGKD-LSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           MGKD LSDDQ SSM+EAF LFDTDGDG+IAPSELGILMRSLGGNPTQAQLK+IIA ENL+
Sbjct: 1   MGKDGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENLS 60

Query: 61  SPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSE 120
           SPFDFNRFL++M+KH+K EPFDRQLRDAFKVLDK+ TG+V V++LRHILTSIGEKLEP+E
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNE 120

Query: 121 FDEWIREVEVGSDGRIR 137
           FDEWI+EV+VGSDG+IR
Sbjct: 121 FDEWIKEVDVGSDGKIR 137

[Close]

BLAST of Lcy11g017770 vs. ExPASy Swiss-Prot
Match: Q8VZ50 (Probable calcium-binding protein CML14 OS=Arabidopsis thaliana OX=3702 GN=CML14 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-58
Identity = 109/137 (79.56%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MGKD-LSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           M KD LS+DQ SSM+EAF LFDTDGDG+IAPSELGILMRSLGGNPT++QLK+II  ENL+
Sbjct: 1   MSKDGLSNDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTESQLKSIITTENLS 60

Query: 61  SPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSE 120
           SPFDFNRFL++M+KH+K EPFDRQLRDAFKVLDK+ TG+V V++LRHILTSIGEKL+PSE
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSE 120

Query: 121 FDEWIREVEVGSDGRIR 137
           FDEWI+EV+VGSDG+IR
Sbjct: 121 FDEWIKEVDVGSDGKIR 137

[Close]

BLAST of Lcy11g017770 vs. ExPASy Swiss-Prot
Match: Q84VG0 (Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica OX=39947 GN=CML7 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-54
Identity = 101/135 (74.81%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 2   GKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTSP 61
           GK+LS++Q +SMREAF+LFDTDGDGRIAPSELG+LMRSLGGNPTQAQL+ I A+E LT+P
Sbjct: 3   GKELSEEQVASMREAFSLFDTDGDGRIAPSELGVLMRSLGGNPTQAQLRDIAAQEKLTAP 62

Query: 62  FDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEFD 121
           FDF RFL++M  H++PEPFDR LRDAF+VLDKD +G V V++LRH+LTSIGEKLEP EFD
Sbjct: 63  FDFPRFLDLMRAHLRPEPFDRPLRDAFRVLDKDASGTVSVADLRHVLTSIGEKLEPHEFD 122

Query: 122 EWIREVEVGSDGRIR 137
           EWIREV+V  DG IR
Sbjct: 123 EWIREVDVAPDGTIR 137

[Close]

BLAST of Lcy11g017770 vs. ExPASy Swiss-Prot
Match: Q03509 (Calmodulin-6 OS=Arabidopsis thaliana OX=3702 GN=CAM6 PE=1 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 8.9e-31
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+DDQ S  +EAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TSPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DKD  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDE 120

Query: 121 EFDEWIREVEVGSDGRI 136
           E DE IRE +V  DG+I
Sbjct: 121 EVDEMIREADVDGDGQI 137

[Close]

BLAST of Lcy11g017770 vs. ExPASy Swiss-Prot
Match: P62200 (Calmodulin-1/11/16 OS=Daucus carota OX=4039 GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+DDQ S  +EAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TSPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DKD  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGSDGRI 136
           E DE IRE +V  DG+I
Sbjct: 121 EVDEMIREADVDGDGQI 137

[Close]

BLAST of Lcy11g017770 vs. ExPASy TrEMBL
Match: A0A0A0L2F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036390 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.5e-68
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMKPEPFDRQLRDAFKVLDKDNTGYV VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREVEVGSDG IR
Sbjct: 121 DEWIREVEVGSDGSIR 136

[Close]

BLAST of Lcy11g017770 vs. ExPASy TrEMBL
Match: A0A5D3D7C6 (Putative calcium-binding protein CML13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001330 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.2e-68
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMKPEPFDRQLRDAFKVLDKDNTG+V VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGFVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREVEVGSDG IR
Sbjct: 121 DEWIREVEVGSDGSIR 136

[Close]

BLAST of Lcy11g017770 vs. ExPASy TrEMBL
Match: A0A7G7Y0U3 (CML13 OS=Cucumis melo subsp. melo OX=412675 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.2e-68
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMKPEPFDRQLRDAFKVLDKDNTG+V VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGFVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREVEVGSDG IR
Sbjct: 121 DEWIREVEVGSDGSIR 136

[Close]

BLAST of Lcy11g017770 vs. ExPASy TrEMBL
Match: A0A1S3BLQ3 (probable calcium-binding protein CML13 OS=Cucumis melo OX=3656 GN=LOC103490931 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.2e-68
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMKPEPFDRQLRDAFKVLDKDNTG+V VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGFVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREVEVGSDG IR
Sbjct: 121 DEWIREVEVGSDGSIR 136

[Close]

BLAST of Lcy11g017770 vs. ExPASy TrEMBL
Match: A0A6J1DIL4 (probable calcium-binding protein CML13 OS=Momordica charantia OX=3673 GN=LOC111020377 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 9.4e-68
Identity = 130/136 (95.59%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSM+EAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEE+LTS
Sbjct: 1   MGKDLSDDQKSSMKEAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEESLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL++MSKHMKPEPFDRQLRDAFKVLDKDNTG+VLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDLMSKHMKPEPFDRQLRDAFKVLDKDNTGFVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREV+VGSDGRIR
Sbjct: 121 DEWIREVDVGSDGRIR 136

[Close]

BLAST of Lcy11g017770 vs. NCBI nr
Match: XP_038876882.1 (probable calcium-binding protein CML13 [Benincasa hispida])

HSP 1 Score: 273.1 bits (697), Expect = 2.1e-69
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT+
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREVEVGSDGRIR
Sbjct: 121 DEWIREVEVGSDGRIR 136

[Close]

BLAST of Lcy11g017770 vs. NCBI nr
Match: XP_004147942.1 (probable calcium-binding protein CML13 [Cucumis sativus] >KGN55913.1 hypothetical protein Csa_011609 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 5.1e-68
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMKPEPFDRQLRDAFKVLDKDNTGYV VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREVEVGSDG IR
Sbjct: 121 DEWIREVEVGSDGSIR 136

[Close]

BLAST of Lcy11g017770 vs. NCBI nr
Match: XP_008448907.1 (PREDICTED: probable calcium-binding protein CML13 [Cucumis melo] >QNH87118.1 CML13 [Cucumis melo subsp. melo] >TYK19478.1 putative calcium-binding protein CML13 [Cucumis melo var. makuwa])

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-67
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMKPEPFDRQLRDAFKVLDKDNTG+V VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGFVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREVEVGSDG IR
Sbjct: 121 DEWIREVEVGSDGSIR 136

[Close]

BLAST of Lcy11g017770 vs. NCBI nr
Match: XP_022152721.1 (probable calcium-binding protein CML13 [Momordica charantia])

HSP 1 Score: 266.5 bits (680), Expect = 2.0e-67
Identity = 130/136 (95.59%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLSDDQKSSM+EAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEE+LTS
Sbjct: 1   MGKDLSDDQKSSMKEAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEESLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL++MSKHMKPEPFDRQLRDAFKVLDKDNTG+VLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDLMSKHMKPEPFDRQLRDAFKVLDKDNTGFVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREV+VGSDGRIR
Sbjct: 121 DEWIREVDVGSDGRIR 136

[Close]

BLAST of Lcy11g017770 vs. NCBI nr
Match: XP_023005593.1 (probable calcium-binding protein CML13 [Cucurbita maxima])

HSP 1 Score: 266.2 bits (679), Expect = 2.5e-67
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60
           MGKDLS+DQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS
Sbjct: 1   MGKDLSNDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFLEIMSKHMKPE FDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLEIMSKHMKPESFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGSDGRIR 137
           DEWIREVEVG DG+IR
Sbjct: 121 DEWIREVEVGPDGKIR 136

[Close]

BLAST of Lcy11g017770 vs. TAIR 10
Match: AT1G12310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-62
Identity = 114/137 (83.21%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MGKD-LSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           MGKD LSDDQ SSM+EAF LFDTDGDG+IAPSELGILMRSLGGNPTQAQLK+IIA ENL+
Sbjct: 1   MGKDGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENLS 60

Query: 61  SPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSE 120
           SPFDFNRFL++M+KH+K EPFDRQLRDAFKVLDK+ TG+V V++LRHILTSIGEKLEP+E
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNE 120

Query: 121 FDEWIREVEVGSDGRIR 137
           FDEWI+EV+VGSDG+IR
Sbjct: 121 FDEWIKEVDVGSDGKIR 137

[Close]

BLAST of Lcy11g017770 vs. TAIR 10
Match: AT1G62820.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 227.6 bits (579), Expect = 9.4e-60
Identity = 109/137 (79.56%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MGKD-LSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           M KD LS+DQ SSM+EAF LFDTDGDG+IAPSELGILMRSLGGNPT++QLK+II  ENL+
Sbjct: 1   MSKDGLSNDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTESQLKSIITTENLS 60

Query: 61  SPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSE 120
           SPFDFNRFL++M+KH+K EPFDRQLRDAFKVLDK+ TG+V V++LRHILTSIGEKL+PSE
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSE 120

Query: 121 FDEWIREVEVGSDGRIR 137
           FDEWI+EV+VGSDG+IR
Sbjct: 121 FDEWIKEVDVGSDGKIR 137

[Close]

BLAST of Lcy11g017770 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 )

HSP 1 Score: 135.2 bits (339), Expect = 6.3e-32
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+DDQ S  +EAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TSPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DKD  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDE 120

Query: 121 EFDEWIREVEVGSDGRI 136
           E DE IRE +V  DG+I
Sbjct: 121 EVDEMIREADVDGDGQI 137

[Close]

BLAST of Lcy11g017770 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 )

HSP 1 Score: 134.8 bits (338), Expect = 8.3e-32
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+DDQ S  +EAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TSPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DKD  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGSDGRI 136
           E DE IRE +V  DG+I
Sbjct: 121 EVDEMIREADVDGDGQI 137

[Close]

BLAST of Lcy11g017770 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 )

HSP 1 Score: 133.7 bits (335), Expect = 1.8e-31
Identity = 65/137 (47.45%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+DDQ S  +EAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TSPFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DKD  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGSDGRI 136
           E DE I+E +V  DG+I
Sbjct: 121 EVDEMIKEADVDGDGQI 137

The following BLAST results are available for this feature:

BLAST of Lcy11g017770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AZ4	3.7e-61	83.21	Probable calcium-binding protein CML13 OS=Arabidopsis thaliana OX=3702 GN=CML13 ...	[more]
Q8VZ50	1.3e-58	79.56	Probable calcium-binding protein CML14 OS=Arabidopsis thaliana OX=3702 GN=CML14 ...	[more]
Q84VG0	1.5e-54	74.81	Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q03509	8.9e-31	48.18	Calmodulin-6 OS=Arabidopsis thaliana OX=3702 GN=CAM6 PE=1 SV=2	[more]
P62200	1.2e-30	48.18	Calmodulin-1/11/16 OS=Daucus carota OX=4039 GN=CAM-1 PE=2 SV=2	[more]

BLAST of Lcy11g017770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2F2	2.5e-68	97.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036390 PE=4 SV=1	[more]
A0A5D3D7C6	7.2e-68	97.06	Putative calcium-binding protein CML13 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A7G7Y0U3	7.2e-68	97.06	CML13 OS=Cucumis melo subsp. melo OX=412675 PE=2 SV=1	[more]
A0A1S3BLQ3	7.2e-68	97.06	probable calcium-binding protein CML13 OS=Cucumis melo OX=3656 GN=LOC103490931 P...	[more]
A0A6J1DIL4	9.4e-68	95.59	probable calcium-binding protein CML13 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Lcy11g017770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876882.1	2.1e-69	99.26	probable calcium-binding protein CML13 [Benincasa hispida]	[more]
XP_004147942.1	5.1e-68	97.79	probable calcium-binding protein CML13 [Cucumis sativus] >KGN55913.1 hypothetica...	[more]
XP_008448907.1	1.5e-67	97.06	PREDICTED: probable calcium-binding protein CML13 [Cucumis melo] >QNH87118.1 CML...	[more]
XP_022152721.1	2.0e-67	95.59	probable calcium-binding protein CML13 [Momordica charantia]	[more]
XP_023005593.1	2.5e-67	97.06	probable calcium-binding protein CML13 [Cucurbita maxima]	[more]

BLAST of Lcy11g017770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12310.1	2.6e-62	83.21	Calcium-binding EF-hand family protein	[more]
AT1G62820.1	9.4e-60	79.56	Calcium-binding EF-hand family protein	[more]
AT5G21274.1	6.3e-32	48.18	calmodulin 6	[more]
AT3G43810.1	8.3e-32	48.18	calmodulin 7	[more]
AT2G41110.1	1.8e-31	47.45	calmodulin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 83..111 e-value: 4.7E-4 score: 29.5 coord: 12..40 e-value: 1.2E-4 score: 31.5
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 82..135 e-value: 1.5E-9 score: 38.2
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 13..41 e-value: 3.9E-6 score: 26.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 79..114 score: 12.281773
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 8..43 score: 12.979158
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 14..72 e-value: 2.7874E-10 score: 52.5501
None	No IPR available	GENE3D	1.10.238.10		coord: 81..141 e-value: 3.7E-14 score: 54.6
None	No IPR available	GENE3D	1.10.238.10		coord: 3..79 e-value: 3.6E-20 score: 74.0
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 1..137
None	No IPR available	PANTHER	PTHR23050:SF412	SUBFAMILY NOT NAMED	coord: 1..137
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 21..33
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 5..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g017770.1	Lcy11g017770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding