Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACAATTATGGTAATAGAACGTAACCTTTGAAGCTGGGAACTGGGAAGAGAAGCGCTGGTTGTTGTTAATGGAGGACGGGCCCAAGATTAGTGGTGAAGATGTCATCGAAAAGCTCAAGGATGACGGCGACTTCGATAAACTCCGTCTCAAGATCATTCGCAAGCTCAAAGACAATGTATGTTCATTTTCCTCTTTCCTTTCCATTCCGATTTCCCCTGTTTCCTAGGTTTTTGTTTTATGGTTTTTGCTGTTCATTCAATTTCCGCTTAATAGTTCTGTTAATTCTACTCTTATAGTCATAATTATTAATTAATCATATCGAATTCATATGGTAGAGAATGGAGCTGTGCCGAAAGAGGGATTTGTTGATACATTTGAGCTATTAGTTCTTTCTTTCTTCCATTTCCAAATGAAGCATATTTGTTTAGGGTATTAAGGGAGATAAATTGGGGAAATTGGACTTTACTTAGTGGTAGTATCAATTGAAGTTCTGAAAACATTGACGTACTTGTTGGATTTGGGGTTCTCATAGAAGAAGTCTTCTTAACTGTAGGAAGAATTGCGGAATAATATAGTTGCAATAGTGAAGCATTCGGCAGCTCTTAATCGGGCAGGAACTGAAAATGTAAAGCCTCGGCAAGTTTCTGATGCAATATATGGCGAGGTTGGGTAAGACCAAATTTCTGCTGTCCCATGTTCTTAATTGTTTCTTTTGACATTAGTAATATTGTCGTTGTGATTTACTTTCTTGAATTCTCTAGCTAAAGTAGATCGTGGAGATGAGATGATGACTGCTTCTTTTGTGCTGTGGCAGCTAAAATTTGGATAGGATAGATTGGGTCGACTCTTCTTATAATGGGAGGTGAAAGTTTCATCTCGTCCAGATGAAGTACTTGCTTCACATTAAGAAGTTCCCACTATGACATTCTATAAAACCCCCTTCACTGTTCTTTACTCAAGTTTTTTTTTTTTAACCAAAACAAACTTTTCTTTGATGTGTGAAAAGATAGAAAAATGTTCAAGGATACAAACTCCTGTAGGGAGTGAAAAGAAACCCAAACAACAAAACAAAGTGAAGATCTCCAAATATTTCTAGAGCCAAAAGAATAAAATATCGAAGAACAAAATGCCTGAGAAGATTTCGAACCGCCAACAAGCCAAAGCGACCAAAACTACTCCCACCCTGCACCAAGTTGTCGAGAAGAAAATAAAATCTATAAACCATTTTCGGAGAATGCAGTAAGTCCTTCTTCACATGGCTCTTCCCTTCAACGACCAAATCTTGAATCAATAAACCAAACTCTTCCTCACCGATACTACTAATACTAATATCAGAGACATCATCAAATCTTTCCTCTTCTGAAGTGCATCTACATCTTTTCTTGTTGACTGAGTTGTTCCAAAAGACAGAGGAATATGCACTCTTGAGTCTGATGAGTTCTCGAATTCTTCCCCATTAGCTAAATTCAAAACTGAGTGGATGAGTGGCTCAAGTCATCTATGAAGACCAAATATCTTGGACACCTTTGTTTGCTGGCATTTGTTTCTATAGAAATTTAGGACCAATTAGTCTTATCTGGTGCTGAAGTCGTTGGATAAACATTGACAGACAAAATTGTAAAGAAGACTGCAAGATTGGTCGATTATCTTATATAATTTACCAGTATAGTTGTTTCCCTCTTCTTATTGTCCATACTGAAATTTTCTTTTAAAGAAAATTAAAGTGCCTATTGAGAGATGAGAAGGTAATGATGTATTTGCCTTGTCTTTAGGGATGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATAATCAGATCAGCTGATGGCATGAAAAATGAAATTACAGAAACGGTACAATCTGTCTACAATAAGTTAGCGAACCCGAAAGCGAAGGAAGATGCCGAAGCATCCACCCACCATGCTATACCAGTTTGGAAGGAAGCCGATAATAATGGTTCTACAAAGACCTCCACCAGTCGATTTGAACATTCTGAGACTGATCCTGTAGAACCTCCAGGTTTCTCCTTTGCTGGTAATCATGCGAACAATGAGAAACAGCACGTAGAGGAGCTGCAATTTCCGAAACGTCACGAAGGAAGGCATGATAATGATAGTCGAAAGGAAGAGGGACACCATCCAAACAATGTGTCTGATGCAGACGATGTTGATCTGCCGCCAGGCTTTGTTTCAAACAGGAAGCACAACCAAATGTGTGAAGATGCTGGTAGTGATGAAGACCCGGATGTGCCCCCTGGTTTCGGTTGAAGAACTACATTTTTATTTTGGTTTTCTTCTGATTTTGCTGTCACCAGTTTTTGAGCATCTTGCAACAAGAAATTGGTTGAATCCCATGTTGCGACACGATGAAAAAGTCGGGATTAATCAGTGGATCATTTCATCTGCCATGGTTCGTAATGGATGCTTACAAATGTTCTCATGGATATAGGTGATTGTAATGTATAAAATTTGTTCCATGTGGACTAAATTATGGAACACTATGTTGAGAAGACAATGCAGTTCATGTATAAAGTTCCGATCGATAACCATAGCGAAGTTTGGTGAAAAGCCACAAGTTCAAAAAGCTTTTTGCTATTGTAAGTTAGTGTGAGTTTTCTATAAAGCTCAAAATTAATAGCAAAATGTTATTTTTGGTGAGAA
mRNA sequence
CAAACAATTATGGTAATAGAACGTAACCTTTGAAGCTGGGAACTGGGAAGAGAAGCGCTGGTTGTTGTTAATGGAGGACGGGCCCAAGATTAGTGGTGAAGATGTCATCGAAAAGCTCAAGGATGACGGCGACTTCGATAAACTCCGTCTCAAGATCATTCGCAAGCTCAAAGACAATGAAGAATTGCGGAATAATATAGTTGCAATAGTGAAGCATTCGGCAGCTCTTAATCGGGCAGGAACTGAAAATGTAAAGCCTCGGCAAGTTTCTGATGCAATATATGGCGAGGTTGGGGATGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATAATCAGATCAGCTGATGGCATGAAAAATGAAATTACAGAAACGGTACAATCTGTCTACAATAAGTTAGCGAACCCGAAAGCGAAGGAAGATGCCGAAGCATCCACCCACCATGCTATACCAGTTTGGAAGGAAGCCGATAATAATGGTTCTACAAAGACCTCCACCAGTCGATTTGAACATTCTGAGACTGATCCTGTAGAACCTCCAGGTTTCTCCTTTGCTGGTAATCATGCGAACAATGAGAAACAGCACGTAGAGGAGCTGCAATTTCCGAAACGTCACGAAGGAAGGCATGATAATGATAGTCGAAAGGAAGAGGGACACCATCCAAACAATGTGTCTGATGCAGACGATGTTGATCTGCCGCCAGGCTTTGTTTCAAACAGGAAGCACAACCAAATGTGTGAAGATGCTGGTAGTGATGAAGACCCGGATGTGCCCCCTGGTTTCGGTTGAAGAACTACATTTTTATTTTGGTTTTCTTCTGATTTTGCTGTCACCAGTTTTTGAGCATCTTGCAACAAGAAATTGGTTGAATCCCATGTTGCGACACGATGAAAAAGTCGGGATTAATCAGTGGATCATTTCATCTGCCATGGTTCGTAATGGATGCTTACAAATGTTCTCATGGATATAGGTGATTGTAATGTATAAAATTTGTTCCATGTGGACTAAATTATGGAACACTATGTTGAGAAGACAATGCAGTTCATGTATAAAGTTCCGATCGATAACCATAGCGAAGTTTGGTGAAAAGCCACAAGTTCAAAAAGCTTTTTGCTATTGTAAGTTAGTGTGAGTTTTCTATAAAGCTCAAAATTAATAGCAAAATGTTATTTTTGGTGAGAA
Coding sequence (CDS)
ATGGAGGACGGGCCCAAGATTAGTGGTGAAGATGTCATCGAAAAGCTCAAGGATGACGGCGACTTCGATAAACTCCGTCTCAAGATCATTCGCAAGCTCAAAGACAATGAAGAATTGCGGAATAATATAGTTGCAATAGTGAAGCATTCGGCAGCTCTTAATCGGGCAGGAACTGAAAATGTAAAGCCTCGGCAAGTTTCTGATGCAATATATGGCGAGGTTGGGGATGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATAATCAGATCAGCTGATGGCATGAAAAATGAAATTACAGAAACGGTACAATCTGTCTACAATAAGTTAGCGAACCCGAAAGCGAAGGAAGATGCCGAAGCATCCACCCACCATGCTATACCAGTTTGGAAGGAAGCCGATAATAATGGTTCTACAAAGACCTCCACCAGTCGATTTGAACATTCTGAGACTGATCCTGTAGAACCTCCAGGTTTCTCCTTTGCTGGTAATCATGCGAACAATGAGAAACAGCACGTAGAGGAGCTGCAATTTCCGAAACGTCACGAAGGAAGGCATGATAATGATAGTCGAAAGGAAGAGGGACACCATCCAAACAATGTGTCTGATGCAGACGATGTTGATCTGCCGCCAGGCTTTGTTTCAAACAGGAAGCACAACCAAATGTGTGAAGATGCTGGTAGTGATGAAGACCCGGATGTGCCCCCTGGTTTCGGTTGA
Protein sequence
MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTENVKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDAEASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFPKRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG
Homology
BLAST of Lcy11g017400 vs. ExPASy TrEMBL
Match:
A0A0A0L4H3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038130 PE=4 SV=1)
HSP 1 Score: 412.1 bits (1058), Expect = 1.5e-111
Identity = 210/242 (86.78%), Postives = 223/242 (92.15%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME GPK+SGE VIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVK SAALNRAGTEN
Sbjct: 1 MEVGPKVSGEAVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGTEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAIY EVG+EIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKA+E+A
Sbjct: 61 VKPRQISDAIYDEVGEEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAEENA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
EASTHHAIP KE DNNGS K STS+ EHSE DPVEPPGFSFAGNH NN +QH+E+LQFP
Sbjct: 121 EASTHHAIPARKEGDNNGSMKASTSQLEHSEADPVEPPGFSFAGNHTNNGRQHIEDLQFP 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGS--DEDPDVPPG 240
K HEGRH+NDSR EGH+PNNVSDAD+VDLPPGFVSNRKHNQM +DAGS DEDPDVPPG
Sbjct: 181 KHHEGRHNNDSRNVEGHNPNNVSDADNVDLPPGFVSNRKHNQMFKDAGSDDDEDPDVPPG 240
BLAST of Lcy11g017400 vs. ExPASy TrEMBL
Match:
A0A1S3BKW9 (uncharacterized protein LOC103490958 OS=Cucumis melo OX=3656 GN=LOC103490958 PE=4 SV=1)
HSP 1 Score: 403.3 bits (1035), Expect = 7.2e-109
Identity = 206/240 (85.83%), Postives = 216/240 (90.00%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME GPKISGE VIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVK SAALNRAGTEN
Sbjct: 1 MEVGPKISGEAVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGTEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAIY EVG+EIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKA+E+A
Sbjct: 61 VKPRQISDAIYDEVGEEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAEENA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
EASTHHA+PVWKE DNNGS K STS+ EHSE DP EPPGFSFAGNH NN KQH+E+LQFP
Sbjct: 121 EASTHHAVPVWKEGDNNGSMKASTSQLEHSEADPEEPPGFSFAGNHTNNGKQHIEDLQFP 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG 240
K EGRH NDSR EGH+PNNVSDAD+VDLPPGFVSNRKHN D DEDPDVPPGFG
Sbjct: 181 KHREGRHSNDSRNLEGHNPNNVSDADNVDLPPGFVSNRKHN---PDVDDDEDPDVPPGFG 237
BLAST of Lcy11g017400 vs. ExPASy TrEMBL
Match:
A0A6J1DEX6 (uncharacterized protein LOC111020416 OS=Momordica charantia OX=3673 GN=LOC111020416 PE=4 SV=1)
HSP 1 Score: 386.7 bits (992), Expect = 6.9e-104
Identity = 201/240 (83.75%), Postives = 210/240 (87.50%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME P ISGEDVIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVK SAALNRAGTEN
Sbjct: 1 MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAIY EVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPK EDA
Sbjct: 61 VKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKMNEDA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
AST H V KEA NNG K STS FE SE DPVEPPGFSFAGNHANNEKQHVEE +FP
Sbjct: 121 GASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFP 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG 240
+RHEGRHD +SR EGHH NNV DAD VDLPPGF SN+ HN+MC+DAGSDEDPDVPPGFG
Sbjct: 181 ERHEGRHDYNSRNVEGHHQNNVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG 240
BLAST of Lcy11g017400 vs. ExPASy TrEMBL
Match:
A0A6J1FJ59 (uncharacterized protein LOC111446176 OS=Cucurbita moschata OX=3662 GN=LOC111446176 PE=4 SV=1)
HSP 1 Score: 372.1 bits (954), Expect = 1.8e-99
Identity = 195/240 (81.25%), Postives = 209/240 (87.08%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME GPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVK SAALNRAG EN
Sbjct: 1 MEVGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGAEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAI+ EVGDEIMSKVSDNLWEIIRS DGMKNEITETVQS+Y+ LANPKAKEDA
Sbjct: 61 VKPRQLSDAIFDEVGDEIMSKVSDNLWEIIRSDDGMKNEITETVQSIYDNLANPKAKEDA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
EASTHHAIPVWKEADNNGS K STS+ EH+E++P+EP G+SFAGNH N EKQHV+ELQF
Sbjct: 121 EASTHHAIPVWKEADNNGSMKASTSQSEHTESNPIEPSGYSFAGNHTNKEKQHVDELQFI 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG 240
KR DNDSR N++SDAD+VD PGFVSN KHNQMC D SDEDPDVPPGFG
Sbjct: 181 KR-----DNDSR-------NDMSDADNVDPAPGFVSNTKHNQMCIDDDSDEDPDVPPGFG 228
BLAST of Lcy11g017400 vs. ExPASy TrEMBL
Match:
A0A6J1KZH9 (uncharacterized protein LOC111498492 OS=Cucurbita maxima OX=3661 GN=LOC111498492 PE=4 SV=1)
HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98
Identity = 194/240 (80.83%), Postives = 207/240 (86.25%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME GPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVK SAALNRAG EN
Sbjct: 1 MEVGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGAEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SD I+ EVGDEIMSKVSDNLWEIIRS DGMKNEITETVQS+YN LANPKAKEDA
Sbjct: 61 VKPRQLSDTIFDEVGDEIMSKVSDNLWEIIRSDDGMKNEITETVQSIYNNLANPKAKEDA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
EA+THHAIPVWKEADNNGS K STS+ EH+ET+P+EP GFSFAGNH N EKQHV+ELQF
Sbjct: 121 EAATHHAIPVWKEADNNGSMKASTSQSEHTETNPIEPSGFSFAGNHTNKEKQHVDELQFI 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG 240
KR NDSR N++SDAD+VD PGFVSN KH+QMC D SDEDPDVPPGFG
Sbjct: 181 KR-----GNDSR-------NDMSDADNVDPAPGFVSNTKHHQMCIDDDSDEDPDVPPGFG 228
BLAST of Lcy11g017400 vs. NCBI nr
Match:
XP_038903340.1 (uncharacterized protein LOC120089960 [Benincasa hispida])
HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-112
Identity = 212/240 (88.33%), Postives = 222/240 (92.50%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME GPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNI+AIVK SAALNRAG EN
Sbjct: 1 MEIGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIIAIVKQSAALNRAGAEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAIY EVG+EIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKA+E+A
Sbjct: 61 VKPRQLSDAIYDEVGEEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAEENA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
EAST H IPV KE NNGS K STS+F+HSE DP+EPPGFSFAGNH NN KQHVEELQFP
Sbjct: 121 EASTQHTIPVRKEV-NNGSMKASTSQFDHSEADPIEPPGFSFAGNHTNNGKQHVEELQFP 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG 240
K HEGRH+NDSR EGHHPNNV DADDVDLPPGFVSNRKHNQMC+DAGSDEDPDVPPGFG
Sbjct: 181 KCHEGRHNNDSRNVEGHHPNNVFDADDVDLPPGFVSNRKHNQMCKDAGSDEDPDVPPGFG 239
BLAST of Lcy11g017400 vs. NCBI nr
Match:
XP_004147961.1 (uncharacterized protein LOC101206797 [Cucumis sativus])
HSP 1 Score: 412.1 bits (1058), Expect = 3.2e-111
Identity = 210/242 (86.78%), Postives = 223/242 (92.15%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME GPK+SGE VIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVK SAALNRAGTEN
Sbjct: 1 MEVGPKVSGEAVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGTEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAIY EVG+EIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKA+E+A
Sbjct: 61 VKPRQISDAIYDEVGEEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAEENA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
EASTHHAIP KE DNNGS K STS+ EHSE DPVEPPGFSFAGNH NN +QH+E+LQFP
Sbjct: 121 EASTHHAIPARKEGDNNGSMKASTSQLEHSEADPVEPPGFSFAGNHTNNGRQHIEDLQFP 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGS--DEDPDVPPG 240
K HEGRH+NDSR EGH+PNNVSDAD+VDLPPGFVSNRKHNQM +DAGS DEDPDVPPG
Sbjct: 181 KHHEGRHNNDSRNVEGHNPNNVSDADNVDLPPGFVSNRKHNQMFKDAGSDDDEDPDVPPG 240
BLAST of Lcy11g017400 vs. NCBI nr
Match:
XP_008448942.1 (PREDICTED: uncharacterized protein LOC103490958 [Cucumis melo])
HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-108
Identity = 206/240 (85.83%), Postives = 216/240 (90.00%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME GPKISGE VIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVK SAALNRAGTEN
Sbjct: 1 MEVGPKISGEAVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGTEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAIY EVG+EIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKA+E+A
Sbjct: 61 VKPRQISDAIYDEVGEEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAEENA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
EASTHHA+PVWKE DNNGS K STS+ EHSE DP EPPGFSFAGNH NN KQH+E+LQFP
Sbjct: 121 EASTHHAVPVWKEGDNNGSMKASTSQLEHSEADPEEPPGFSFAGNHTNNGKQHIEDLQFP 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG 240
K EGRH NDSR EGH+PNNVSDAD+VDLPPGFVSNRKHN D DEDPDVPPGFG
Sbjct: 181 KHREGRHSNDSRNLEGHNPNNVSDADNVDLPPGFVSNRKHN---PDVDDDEDPDVPPGFG 237
BLAST of Lcy11g017400 vs. NCBI nr
Match:
XP_022152780.1 (uncharacterized protein LOC111020416 [Momordica charantia] >XP_022152781.1 uncharacterized protein LOC111020416 [Momordica charantia])
HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 201/240 (83.75%), Postives = 210/240 (87.50%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME P ISGEDVIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVK SAALNRAGTEN
Sbjct: 1 MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAIY EVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPK EDA
Sbjct: 61 VKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKMNEDA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
AST H V KEA NNG K STS FE SE DPVEPPGFSFAGNHANNEKQHVEE +FP
Sbjct: 121 GASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFP 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG 240
+RHEGRHD +SR EGHH NNV DAD VDLPPGF SN+ HN+MC+DAGSDEDPDVPPGFG
Sbjct: 181 ERHEGRHDYNSRNVEGHHQNNVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG 240
BLAST of Lcy11g017400 vs. NCBI nr
Match:
KAG6596817.1 (hypothetical protein SDJN03_09997, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028344.1 hypothetical protein SDJN02_09525 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 373.6 bits (958), Expect = 1.3e-99
Identity = 196/240 (81.67%), Postives = 209/240 (87.08%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
ME GPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVK SAALNRAG EN
Sbjct: 1 MEVGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGAEN 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
VKPRQ+SDAI+ EVGDEIMSKVSDNLWEIIRS DGMKNEITETVQS+Y+ LANPKAKEDA
Sbjct: 61 VKPRQLSDAIFDEVGDEIMSKVSDNLWEIIRSDDGMKNEITETVQSIYDNLANPKAKEDA 120
Query: 121 EASTHHAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFP 180
EASTHHAIPVWKEADNNGS K STS+ EH+ET+P+EP G+SFAGNH N EKQHV+ELQF
Sbjct: 121 EASTHHAIPVWKEADNNGSMKASTSQSEHTETNPIEPSGYSFAGNHTNKEKQHVDELQFI 180
Query: 181 KRHEGRHDNDSRKEEGHHPNNVSDADDVDLPPGFVSNRKHNQMCEDAGSDEDPDVPPGFG 240
KR DNDSR N++SDAD+VD PGFVSN KHNQMC D SDEDPDVPPGFG
Sbjct: 181 KR-----DNDSR-------NDMSDADNVDPAPGFVSNTKHNQMCIDDDSDEDPDVPPGFG 228
BLAST of Lcy11g017400 vs. TAIR 10
Match:
AT1G12530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 92/209 (44.02%), Postives = 128/209 (61.24%), Query Frame = 0
Query: 6 KISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTENVKPRQ 65
KIS E+V+EKLKDDGDFD+LRLKIIR+LK+NE+LRNN++++VK S +L R G +N+K RQ
Sbjct: 7 KISKEEVVEKLKDDGDFDRLRLKIIRRLKENEDLRNNMISVVKESTSLKRHGAQNMKTRQ 66
Query: 66 VSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDAEASTH 125
+SDAI+ EVG +++S++SD LW IIRS DGMKNEI ETVQSVY L+NP+ ++
Sbjct: 67 LSDAIFEEVGSKMLSQLSDGLWGIIRSEDGMKNEIRETVQSVYATLSNPRGEKRG----- 126
Query: 126 HAIPVWKEADNNGSTKTSTSRFEHSETDPVEPPGFSFAGNHANNEKQHVEELQFPKRHEG 185
TS EH P + F + A+ +KQ + +
Sbjct: 127 ----------------TSAREMEHKIPTPKKEARTDFNTSPASKQKQELIKGAVEDNKGE 186
Query: 186 RHDNDSRKEEGHHPNNVSDADDVDLPPGF 215
+D + +G N+ D +D +LPPGF
Sbjct: 187 ACSDDVQDNKGEAYND--DEEDPELPPGF 192
BLAST of Lcy11g017400 vs. TAIR 10
Match:
AT1G56420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 82.0 bits (201), Expect = 7.0e-16
Identity = 51/157 (32.48%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 1 MEDGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKHSAALNRAGTEN 60
M I EDV+E L +DG D LRL+II +LK NEEL++ + + + S LN G E
Sbjct: 1 MSSSSVIKPEDVLEHLMNDGTIDALRLRIINQLKANEELKSTTIKMAEESKVLNTPGAEK 60
Query: 61 VKPRQVSDAIYGEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAKEDA 120
R++ DA+ E+ ++ K S ++W++I DG+ EI ETV+ V+ L+ + +
Sbjct: 61 QTKRELFDALRQELEGPVLEKASKSVWDLIIEKDGLGKEINETVERVFCHLSGQEPPFYS 120
Query: 121 EASTHHA-IPVWKEADNNGSTKTSTSRFEHSETDPVE 157
++ + + KE + S+KT + SE + E
Sbjct: 121 SSNVEKTPMEIDKETEVKDSSKTKPKKRSLSEVNSSE 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L4H3 | 1.5e-111 | 86.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038130 PE=4 SV=1 | [more] |
A0A1S3BKW9 | 7.2e-109 | 85.83 | uncharacterized protein LOC103490958 OS=Cucumis melo OX=3656 GN=LOC103490958 PE=... | [more] |
A0A6J1DEX6 | 6.9e-104 | 83.75 | uncharacterized protein LOC111020416 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A6J1FJ59 | 1.8e-99 | 81.25 | uncharacterized protein LOC111446176 OS=Cucurbita moschata OX=3662 GN=LOC1114461... | [more] |
A0A6J1KZH9 | 1.1e-98 | 80.83 | uncharacterized protein LOC111498492 OS=Cucurbita maxima OX=3661 GN=LOC111498492... | [more] |
Match Name | E-value | Identity | Description | |
XP_038903340.1 | 1.3e-112 | 88.33 | uncharacterized protein LOC120089960 [Benincasa hispida] | [more] |
XP_004147961.1 | 3.2e-111 | 86.78 | uncharacterized protein LOC101206797 [Cucumis sativus] | [more] |
XP_008448942.1 | 1.5e-108 | 85.83 | PREDICTED: uncharacterized protein LOC103490958 [Cucumis melo] | [more] |
XP_022152780.1 | 1.4e-103 | 83.75 | uncharacterized protein LOC111020416 [Momordica charantia] >XP_022152781.1 uncha... | [more] |
KAG6596817.1 | 1.3e-99 | 81.67 | hypothetical protein SDJN03_09997, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
AT1G12530.1 | 1.2e-36 | 44.02 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G56420.1 | 7.0e-16 | 32.48 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |