Lcy11g016820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g016820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	(thale cress) hypothetical protein
Location	Chr11: 40503517 .. 40511594 (+)
RNA-Seq Expression	Lcy11g016820
Synteny	Lcy11g016820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGTATTTCAGTATTTCACCTTCTTTTACCCATGGTCTAATTTCTGGTTTTTATTCATTCCTATTGCGTCGAGTTGAAGGAAAAAGCGATTGCAAAATCTAGGTTTTAATTGAAAACTTGGATTCTCTGATTGTTTTGTAATTATTTTCTTAAAAGCGAGATAGATGTATATTCTCTCTGGAATTGGATTAAAATCATGGTCTAATTTCTTTAACATGCATTTTTGGTGCAGTGAATAAGAAGAATTGGTTTCAGTTAGGAGTTCTTGGTGCCAACTCTGGAGAAGCAAAATCAATTCATGGCACTGATATGAGATTGTACACCATTCAGAATACATTTATTTACTTCCTATCATGTTCTCTTCAACTGCTTTCCTCTGTTACTTCCATAGTTGAGGGGTGTTGATGTCTATCCTTCAAGTTCTGAGTGATGTTTGCTGATATTATTGTTGCACCAAAATGTTACTCCTATTATTTGCTATCAATTTTATTTTACATACGTATCATGAATACTTTGAGTTCTTATCATTTACATATGTCTGCTAGAGATTATTATGAGACACTTGGTATGAACACATATGTGTTTTCTTTTTGTTTATTCAGGATAAAAGTGAATGGGCCATCAATCCTATTCTCCATGGTACCACGGCAGTGGTGAGTTCCTATCTTTCTAATCTTCTTTTTTTTGTTTTCTCCATGGAATTTCATGAAGGCTTCTAGATTTTTGTTGTGCAGTGAATCAGTGATAAATTTGAACTTTATGTTGTGTTCTTTAAATTAGTCTGCTATAGAGCAATCGATGAACTTTTCTGGAATAATAATGTTAGTGTTTAATTCAATTCAGTTCCACCTATTAGCGATTGGATAATCTTATGTAACTCAATTTATGCTACTGTGTGGATTTTCATGGTTTACTAGGGACGTAAAAGATTGTAGGAATGAATGTATAGGAGTATTTTTGTCATAAATATTGTGGTTTCCATGTCTTTTGACTATTCTTGTACTGCCTTGTTAAATAGGCAGGATTAGGTCTTGGTGAGTTGCTTAGTGCAGTTCATGCCTTTAATACGGGTATGTTAGCAAATTGTTTTTGCTTGTTCTCTCTTTATGTTTCCTCAGCCTATTGGTTTTGCATTATTTTAAAACGAAAAACTGATTACTTACTGCATTGAAATATGCATACAAATTAAGGGAAGGACTAGAACCTACCTAGAAACTTAGAATTTGCTTATCAGGTTGATGAATTCCTCTATTATTTCCTTACTTTTCATTTTTCTGTTTATATTTTGCTTACCATTTCTGTTCTCCTCGATATTCTTTGTGCAGATGCCTTTGAAGGCCACTGAGAGAGATGTTTACGAATTCTTTTCAAAAGCGGGCCACTGAGAGAGATGTTTACGAATTCTTTTCAAAAGCGGGAAAGGTATTTGAAATTTATTACTGAATAGAAGTAATTGAGTGTTTATTTTTTCTTTTGCTAAAAATTAACAATTAAAGGTATTAGCAGTCCTACTTTCATCTATATAATTTCCATGTGTCATGCCCCTCATACTTGTTCACCTCTGTATCATGTATTAGAATAGAAGCATTTTTGTTGCAATGTTATTGCTACAAACGTTATGATTGCATAGATATTGAGATAGATTTGCTTCGTATTGCAATTACTGTTCCTCTGCCTTCAGTTTCAAAACTATAATCAATTTCTTCTATCTCAACATTATTTTTATATGGGGTGAGTGAAAATGTATGAGTTCTGTTGTCATCTCATTGATGGCCAAATGGTGCTTTGCCTCGAGTGTAAAGAATGGAAACCTTTATTTCTTATCTCTTTGTTGGCTTCCAAAATAACCTGCTCTCATTGTTCTTGCAAATTTTAGGTGAGAGATGTTGGGCTGATCATGGATAGGAATTCTAGACGGTCAAAAGGAGTTGGGTATGTGGTCTTGGGATGAGCAATTTTTATATTGTATGCTTGTGATCAAGTTAATATGGTTATTAACTTAGTAGTTTTCAAGTATCAAATTTACCTGTATTTTTAAATGAACTAGCAATGCAAAAATGATGAGGGATGGTGGGAATACTATGCACTCATTTTTAATCAATTCATGCTGCTTGTTGTGAACCTGAAGTGTTGTGAGGTTGTAGTTGAGCGGTTTTTCATATAGAAGTGTGTTTCTCTTGTTTAACAGGTTTAAAAATTTTTGGGATAGTCATATGTATGTCGTTATGCTGTCGAAATTTTCGGAGCATCTGGTTAGAATTAAGATAGAAACTTTAGTAATGTCGCTAGGTTAAGTATAGAAACCTAGAGTGTTACAGGTTCTTTGAATGAGTTAAACTTGATCTCTATGAGTTTGTAAGATTTTGGAGTTTATTGGACTTTCTAACAAATTTTTTCGATACTCATTGAGATTGATTTTTTTTTCTGTATTTTATTGCTAACTAAATTTGTTTTTCTTAGGTTCTTCAAGTTGTTGAACATATGTTTGTTATGTGAGTTCTTGTTTCAGTTGTAAAGTGAGGAATGTTTCGGTTTAATCTAATTGAAATTTGTTTTTCTTAGGTTCTTCAAGATTGATGTACACGAGCAAGATTCTGCCGAAAAGAATGGAAGCTGCATGTACAAGAATTTTTGTTTTTCTTAAGTAGGCTTTTAATCATAGGTGCTTTATAATTTTACTTTTTTATATCAAACTTGTATGAACAAAAATTGTCTGAACAAATTTTATTAATTGGTTTATTGGAATAAAATTAAGCAAATATTTGATTTTTATATAATTTTGAAAATTTTTCTTCTTAAAAAAAAAAGTTGGAAATGACAGACTTTCAATGACGGACATTTAATGACGGGCTTTTAATGACAGACTTTTAATGACGGACATTTAATGATGGACCTTTAATGACGGACATTTGATTGGAAAATACCCTTTCAATGACGAACATTTGATGACAGACGCCCTTTAATGACGGGCACGACCTGTCATTAAAAACGTCACTCATTGTACTTTTTAATGACGGGCAATGCCCGTCATTAAAAGGTACAATGACACTCGTATAGATGACGTACACCGCCTGTCATTTAAAGTCCTTTTTGTAGTAGTGGGCATTTTTCAAGAAGGTTTGTCTTCCTCTACCTCTCGGTTTCGCTCTCTCTCTCTCTCGGTGTTCCAACAGCATTTTCCTTTTCGTCATGAGCAGTAGGTCGTGAGCAGGTTGTTGTGTGGCATGGGTCTCGGCAGAAGGGTGTTTTCCGGCGAGATCAGAGCGTAGCGACGACGTTGGGCGTGGTTTCCGATTCCAACGGCTGTAGGCGTTTTTCTTCGGCGGATTTGGGCGAGATTAACCTTGGGTAAGTTGGAGTAAAGGATATTTTGGTTGATTTTAGCTTTCGGTTGAATACCCACTCATTGTTTGTTCCGTTCAGCGGGTTCTTCGTTCAAATTTCAGCGATTGAGTAGTGGGTCTTCGAGTGCTAGTGTCTTTGAGTAATTTCGGCATTGGGTAAGAGGATTAATTTAGTTTTTAGGTTGTTTAAAACAATTTAGAGGATTACACATTAATTTTGGGTTTTAAGGAATTTTCCTTCTATTTTGTAGATGGTCTAAAGTCTTGGAATCAAGGAGTTTTGAATAGGATAAGTCTTGTGTTATTTAAGCCAATGTAAGTGGCTTTACTACTGGAACGCTTAGGCTAGGTTGAGAAATTGTGTGCTGTTAGGATAGAATTTTCATGTATGATTGTTATGTGATGCATGACCTGATGACACAAGAACTATGAATTTATTTGTTATATGAACCATGATAGACTACGAAATTTTGTGTCATGCATGATTGGTGATTTTATGTGCATTTTCATGTAATATGATGTTTTGATATGGGACCCCATGCATATGTATGTTTCATGAAACTAAAAGAACCATGTTCATGGCAATTACCTTAGAGGAAATTGATGTACATCTAAAGGAACCTGAGGTACTGTAGGCGAGATTCAACCCCACTAATTAGGTGCCAACTGAGTGTTAGATGGGGCGCATTCTCTAGAGGATGCCTATGATATCTCTTAGTTGGGAGAGAAACCAGAAGGAAGGTAATTGTCCATGTAAAGGCCTTAAAAGAAATTTATAATTAAGAGGAAAGAGGAATAGGGTTCCACCAGATAAACATGAACCATGTTGTATGTGTCTGCATATCTTGACCCCAGTAGTGGGGTTACTTACTGAGTATTTTAAATACTCATTCTTTCCATAAATGATTTTTTTTTAGGTAAAGGCAAGGACGAGTGATGGCGATTGATGAGAATTTGTTAGGCAGCCATGGGAGAGACTAGGACTCAAGAATTTCTTATTTCCTTCCGCTTTAAGAACTATATTTCATTCTTTTATTTCTTTAATAAACTTGTTGAAGATTTTTTTTTCAGGTCGTGTAAAAACCGTTAGCTTGAATTTATTTTTTACATTAATTTGTTCTTTTAAAGTTTTGGGATCTTGAATAAAAGTTGTTTTTACTTTGAGGTTTTACTGAAATTACGAGTTTATATTTTAAAAATGTTTTATTTAAAAAGGCCTCCATAGCATGCATGTGGTTGCGATCCTGAATAGGTCCATATTAGAAGTCGGGTCGTTACACACAAGGAGTGTAAAATGCTCTTGGATTTATATCTAATAATTTTTTTTGAACTCCTTGATGCTTACCTTTCATATTCGACCCATTATCATACCCCTGTCCCCTTACATCATCTATATCAAGACAAAGATCCTTCAATTCAGTTTGTAAAACTGATTCGAACTATAACGACTTCTTATTATGCAAAGTAATTAGGGAATATATCATTGCCATGCATTAATCCAAGTATAAATCATGCACAACCAAGTAATACCTGGAACATTCTAGGGTCAGAACACAAGGAAGGGAGTGAAGTAATCTCAACAGTTCTAACAACATATACTCAAACGCATGGGACTTTAAAGTTAAAAAGAAGCTAAGCGGTAGTAATGAGTATGCGGCAAACAGGAATAAAGAAGCAGATGTGATAAGAGTAAAAGCAAATGAGAGAGACTATTAAGGCGTTCACCGTAGCAACCACATCCGTTAATGACATCTCCTGTAGCGCATACTATGAATGAGATGTTATCAATGCTTAAGTGAGAAATAAACATGTGATTCCCTTCCGGTATTACTCATGTGTTTGGCTTAGGACTAAGAATGTTTATGTTCACTTAGGTCATGCGTTAGCGCGGTTCTCTTAATTACGTGCAAGCGACTAAATTATCCCTAAGACAGTCTAAATACATTCATGGATTATCTCTTGCGGTATCGCTAACTCTAACGCAACCTAGACTACATGCAATGCATTATCTTGCTCTACTTAGACGTTTCCACTTGCGTTACCCTTCCGGGATTTATCATGTTGCTACCGCAACCGGCTGGCCAGGCGGACGTTAGTAATGAAAGTATTAGCACATCTAAGTAGAGAACATCAATTTCATTCATTAAAAAAATATAACGCATACAGGAAATGTTCATCGCCGCATTGGTGCCTAGGTTAAGCCTTGATAAAAGAAAGTTAACTCATGCTACTAAAGGAATACATAACACTATACATTAAAAACCGAAGCAGCTGCGCTGAACAAGTATCTTCCTTTTCTTCTCTCTTCTCTTGTCTCCCCCTCTCCCTTTTTCATGAGCAAATGGGTGGAATTTATAGACTTGAGGCTGGTGACTTCTTCAAGCAACATGCTCGCGTGTTCCATCTTCAAGCAACAGGCGAGAATAACTATTGGGTTTCCAGAGTGGGTGAAAATGTAGTAAGAAATAGACTCTAGAACTCTGTGCAAGTATACACAATCCGCAGCAAGTAATAAGTATTTATCGAATCCAAGGTCTGAATTAGCTCTCACTTTATCTATTTTGTATAACTTTTCAATGGTTTCAAAGGTGGTTAAAATGATTGATTTTTATAGAATGTTGAAGCAAAAGGAATGACAAAACATAAAGTAAACAAATAGGCAGACAGATTAGAAACAGGCGCTGGTCAGGATTTCGTAATTGTTTTAAAAGTTGCTCTAGCAATATTATTGATCATGCAAAACTCTCGCAGTCTTATAACCAGATTCCTCCCGGAACTCCGGATTTTTTAGAATGTGTTTCAACTCCAATGACGTACTACCGATCAAGCACTAGGCAACTGGCTATCCCTAGTTCAGTCACTGGCGTTCACCAATACACAATGATCTAGTGTGATTTAATGCCACACACTCCCTAAATCATCCCTGAAACGAGAGAGTGGTGTTCATACCGGCTGCCCAAGCGGGCACAAAATATAAATGAGCGCAACAAATAATCAAGATGCATCAATCAACATTTGTTGCGTAGAGATTAAGCACGACAATTACATGTGTCCTTAACCAACGCCTACAATTACTTAGTTCATAAAGTGCATGGAGACACGTTACAATATAAGTAAATGCATCCATAACTACAAAGTAATACAAGAAAATATTAATTCCCATCAGCTTGCAATTGATGGTCTTCTTGTTGGTCTCCAATCTCTCTCCTCTATTTGGCTCCCAAAATGGAAATGAGAAATGATCCTTCCAAAAGTGGAATGTTCCTCCCAAGGATGGAATTCGCTTCCCAAAAAGCAATGAATTTGACTTGGGCGGCTATCTCCTTTTATGGAGTTGAGGAAAGCTTGAATTAGGTTGACCTAGACACGTGGATGACTCTCCTTGATCCTTTATCCCGAGAATAGCTTAACAGAATTCAGTTCATTAAATTGACTAACGAACTGTGACAGGGCAGTTTTGCTCCCAGCTTTGCTCCAGCACAGATTTTGCTCCCTCAAGTCACTCAGCAATATATTCTGCACAAAATAACTTCCAAAGCATCCATTCTTCCAAATGGGTTAAAACATATAATATCTATCTAAAAGCAACCCTATTTAGCACAAAAGACACACAAATCACTATAGAAATAAGGTCTAAATAACTCCCTTTTGGAGAGTTATCAATAACTTAGCTCTCAAGATTAGACTCAGCACCTAAAACCTTTTAACTTCTTCCACCAATGCTTTTCTAAAGAATTTAGCCCTTACTTAGCTCTCCCCCTAGATTTAAGATTTTCTCCTTGCGCTAGACTTTCCAAACTGAAACAATGCAAACAAGCAAGCTTGCATTACAAGCTCAGGCGCATAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGTGAACATCAATTAATCAACATCAAAACGCATCCTTTCGTTTTGGCTTACCCACATTTGCGATGAAGGGTATCCAACTACGGGCATTGCATTTGTTTACTGCCCTAAACGCTCATGAAATAATTATGCGCTCTCGCGCAAAGACAAACGATGGGTGACATGAATGCCACTGTCTACTAGCGTAAGGAAACCAGTTGGACGCATTTGTTTCATTATTGTTGCGCTAAAACATCTAACATACCCCCAAATTAAAATAGACAATGTCCCCATTGTCCCCCAAACTTGAACATGGGAATGCTTTGCGATGCTCTAAGCAGGCGCTGACTGTGCTGCGATAGTATCAGATCATCAAGCGAAACGAAAAATTCCTAAAGCAGAGGGGAATGCTAAGGAAAGGGAAATTCTTTGGAATGAGTTGCGGTAGAAAAAACTCGGAAATTTTTTTGGATTCTAAGTCATAGCAAATAGAGCTAACTCATAGATATTTAATAGCTAAGGCATAAATTAAAGGCTCTAAAACACAATTGCGATAAAAGATACAAATTTGGCTTTTCATTGATGCGGTGATAAAATACAAAAGATAATTAAAGGAAAACGCATCACAAAAAAAAATTCATAAAAAAATAAAGATAGAAATTTCAGAAGTCAGTCCTTTGGCGGATGTGGTGGTCTAGGTGATCGCGGCAACAGCGGCGGCATCTCAGGGCACACTTGCAATGGCCCAGTGCCATTAGGTCTTTGCGGCGAACGAGGCTGGATGATGAGATTTACTGGCGCAGGAGGCAAATTGCCAAAGGCGCTCATCTAA

mRNA sequence

ATGGATAAAAGTGAATGGGCCATCAATCCTATTCTCCATGGTACCACGGCAGTGGCAGGATTAGGTCTTGGTGAGTTGCTTAGTGCAGTTCATGCCTTTAATACGGTAGGTCGTGAGCAGGTTGTTGTGTGGCATGGGTCTCGGCAGAAGGGTGTTTTCCGGCGAGATCAGAGCGTAGCGACGACGTTGGGCGTGGTTTCCGATTCCAACGGCTGTGATCGCGGCAACAGCGGCGGCATCTCAGGGCACACTTGCAATGGCCCAGTGCCATTAGGTCTTTGCGGCGAACGAGGCTGGATGATGAGATTTACTGGCGCAGGAGGCAAATTGCCAAAGGCGCTCATCTAA

Coding sequence (CDS)

ATGGATAAAAGTGAATGGGCCATCAATCCTATTCTCCATGGTACCACGGCAGTGGCAGGATTAGGTCTTGGTGAGTTGCTTAGTGCAGTTCATGCCTTTAATACGGTAGGTCGTGAGCAGGTTGTTGTGTGGCATGGGTCTCGGCAGAAGGGTGTTTTCCGGCGAGATCAGAGCGTAGCGACGACGTTGGGCGTGGTTTCCGATTCCAACGGCTGTGATCGCGGCAACAGCGGCGGCATCTCAGGGCACACTTGCAATGGCCCAGTGCCATTAGGTCTTTGCGGCGAACGAGGCTGGATGATGAGATTTACTGGCGCAGGAGGCAAATTGCCAAAGGCGCTCATCTAA

Protein sequence

MDKSEWAINPILHGTTAVAGLGLGELLSAVHAFNTVGREQVVVWHGSRQKGVFRRDQSVATTLGVVSDSNGCDRGNSGGISGHTCNGPVPLGLCGERGWMMRFTGAGGKLPKALI

Homology

[Close]

BLAST of Lcy11g016820 vs. ExPASy TrEMBL
Match: A0A0A0LEC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G798610 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.9e-07
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          DKSEWAINP+LHG TAVAG GLG LLSAVHA+NT
Sbjct: 43 DKSEWAINPVLHGVTAVAGSGLGGLLSAVHAYNT 76

[Close]

BLAST of Lcy11g016820 vs. ExPASy TrEMBL
Match: A0A6J1L0N8 (uncharacterized protein LOC111498779 OS=Cucurbita maxima OX=3661 GN=LOC111498779 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 8.4e-07
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          D SEWAINP+LH TTAVAG GLG LLSAVHAFNT
Sbjct: 43 DTSEWAINPVLHSTTAVAGSGLGGLLSAVHAFNT 76

[Close]

BLAST of Lcy11g016820 vs. ExPASy TrEMBL
Match: A0A6J1FZY6 (uncharacterized protein LOC111449402 OS=Cucurbita moschata OX=3662 GN=LOC111449402 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 8.4e-07
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          D SEWAINP+LH TTAVAG GLG LLSAVHAFNT
Sbjct: 43 DTSEWAINPVLHSTTAVAGSGLGGLLSAVHAFNT 76

[Close]

BLAST of Lcy11g016820 vs. ExPASy TrEMBL
Match: A0A6J1DD33 (uncharacterized protein LOC111019374 OS=Momordica charantia OX=3673 GN=LOC111019374 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          DKSEWAINP+LH  TAVAG GLG +LSAVHAFNT
Sbjct: 43 DKSEWAINPVLHDATAVAGSGLGGMLSAVHAFNT 76

[Close]

BLAST of Lcy11g016820 vs. ExPASy TrEMBL
Match: A0A5A7TKA8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00830 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          DKSEWA+NP+LH  TAVAG GLG LLSAVHA+NT
Sbjct: 11 DKSEWAVNPVLHDVTAVAGSGLGGLLSAVHAYNT 44

[Close]

BLAST of Lcy11g016820 vs. NCBI nr
Match: XP_023538973.1 (uncharacterized protein LOC111799746 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-07
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          DKSEWAINP+LH TTAVAG GLG LLSAVHAFNT
Sbjct: 43 DKSEWAINPVLHSTTAVAGSGLGGLLSAVHAFNT 76

[Close]

BLAST of Lcy11g016820 vs. NCBI nr
Match: XP_011652076.1 (uncharacterized protein LOC101220824 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-07
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          DKSEWAINP+LHG TAVAG GLG LLSAVHA+NT
Sbjct: 43 DKSEWAINPVLHGVTAVAGSGLGGLLSAVHAYNT 76

[Close]

BLAST of Lcy11g016820 vs. NCBI nr
Match: XP_038904167.1 (uncharacterized protein LOC120090522 [Benincasa hispida] >XP_038904168.1 uncharacterized protein LOC120090522 [Benincasa hispida])

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-07
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          DKSEWAINP+LHG TAVAG GLG LLSAVHA+NT
Sbjct: 43 DKSEWAINPVLHGVTAVAGSGLGGLLSAVHAYNT 76

[Close]

BLAST of Lcy11g016820 vs. NCBI nr
Match: KAE8651129.1 (hypothetical protein Csa_002251 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-07
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          DKSEWAINP+LHG TAVAG GLG LLSAVHA+NT
Sbjct: 66 DKSEWAINPVLHGVTAVAGSGLGGLLSAVHAYNT 99

[Close]

BLAST of Lcy11g016820 vs. NCBI nr
Match: XP_023005917.1 (uncharacterized protein LOC111498779 [Cucurbita maxima] >XP_023005918.1 uncharacterized protein LOC111498779 [Cucurbita maxima] >XP_023005919.1 uncharacterized protein LOC111498779 [Cucurbita maxima] >XP_023005920.1 uncharacterized protein LOC111498779 [Cucurbita maxima])

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-06
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          D SEWAINP+LH TTAVAG GLG LLSAVHAFNT
Sbjct: 43 DTSEWAINPVLHSTTAVAGSGLGGLLSAVHAFNT 76

[Close]

BLAST of Lcy11g016820 vs. TAIR 10
Match: AT2G41945.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          +K EW I P+LH   AVAG G+G LLSAVHAFNT
Sbjct: 43 EKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNT 76

[Close]

BLAST of Lcy11g016820 vs. TAIR 10
Match: AT2G41945.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          +K EW I P+LH   AVAG G+G LLSAVHAFNT
Sbjct: 43 EKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNT 76

[Close]

BLAST of Lcy11g016820 vs. TAIR 10
Match: AT2G41945.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 2  DKSEWAINPILHGTTAVAGLGLGELLSAVHAFNT 36
          +K EW I P+LH   AVAG G+G LLSAVHAFNT
Sbjct: 43 EKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNT 76

The following BLAST results are available for this feature:

BLAST of Lcy11g016820 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g016820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEC4	2.9e-07	85.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G798610 PE=4 SV=1	[more]
A0A6J1L0N8	8.4e-07	85.29	uncharacterized protein LOC111498779 OS=Cucurbita maxima OX=3661 GN=LOC111498779...	[more]
A0A6J1FZY6	8.4e-07	85.29	uncharacterized protein LOC111449402 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]
A0A6J1DD33	1.4e-06	82.35	uncharacterized protein LOC111019374 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5A7TKA8	2.4e-06	79.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy11g016820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538973.1	3.5e-07	88.24	uncharacterized protein LOC111799746 [Cucurbita pepo subsp. pepo]	[more]
XP_011652076.1	6.0e-07	85.29	uncharacterized protein LOC101220824 [Cucumis sativus]	[more]
XP_038904167.1	6.0e-07	85.29	uncharacterized protein LOC120090522 [Benincasa hispida] >XP_038904168.1 unchara...	[more]
KAE8651129.1	6.0e-07	85.29	hypothetical protein Csa_002251 [Cucumis sativus]	[more]
XP_023005917.1	1.7e-06	85.29	uncharacterized protein LOC111498779 [Cucurbita maxima] >XP_023005918.1 uncharac...	[more]

BLAST of Lcy11g016820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41945.1	1.3e-07	67.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G41945.2	1.3e-07	67.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G41945.3	1.3e-07	67.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g016820.1	Lcy11g016820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0010431	seed maturation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus