
Lcy11g016780 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTCTTTGGCAGGAGCAACTTCAGAGTCCGATCTTCAAGCCGTCATACAAACAGTCGTCCAAACTCTTTCAGATAACGACGACGTTCAAGAAGGAGAAAATCCTAAAGCAACCGAAGCAGCTTCAGAGTCTTCTGTCAATGATATCGAAGATGAATATGACCCATATCTCAACTTCAATATTTTAGACCCTTACTATGATTCCCAATCAGGATGA ATGACGTCTTTGGCAGGAGCAACTTCAGAGTCCGATCTTCAAGCCGTCATACAAACAGTCGTCCAAACTCTTTCAGATAACGACGACGTTCAAGAAGGAGAAAATCCTAAAGCAACCGAAGCAGCTTCAGAGTCTTCTGTCAATGATATCGAAGATGAATATGACCCATATCTCAACTTCAATATTTTAGACCCTTACTATGATTCCCAATCAGGATGA ATGACGTCTTTGGCAGGAGCAACTTCAGAGTCCGATCTTCAAGCCGTCATACAAACAGTCGTCCAAACTCTTTCAGATAACGACGACGTTCAAGAAGGAGAAAATCCTAAAGCAACCGAAGCAGCTTCAGAGTCTTCTGTCAATGATATCGAAGATGAATATGACCCATATCTCAACTTCAATATTTTAGACCCTTACTATGATTCCCAATCAGGATGA MTSLAGATSESDLQAVIQTVVQTLSDNDDVQEGENPKATEAASESSVNDIEDEYDPYLNFNILDPYYDSQSG Homology
BLAST of Lcy11g016780 vs. ExPASy TrEMBL
Match: A0A5A7STS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00870 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.6e-09 Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of Lcy11g016780 vs. ExPASy TrEMBL
Match: A0A5A7VA49 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00290 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.6e-09 Identity = 37/69 (53.62%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Lcy11g016780 vs. ExPASy TrEMBL
Match: A0A5D3BD22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001850 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.8e-08 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of Lcy11g016780 vs. ExPASy TrEMBL
Match: A0A5A7UEA0 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00850 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.6e-08 Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of Lcy11g016780 vs. ExPASy TrEMBL
Match: A0A5A7U8X4 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001080 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.4e-07 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of Lcy11g016780 vs. NCBI nr
Match: KAA0033913.1 (hypothetical protein E6C27_scaffold43059G001040 [Cucumis melo var. makuwa] >TYK01295.1 hypothetical protein E5676_scaffold49G00870 [Cucumis melo var. makuwa]) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08 Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of Lcy11g016780 vs. NCBI nr
Match: KAA0062549.1 (hypothetical protein E6C27_scaffold79G00290 [Cucumis melo var. makuwa]) HSP 1 Score: 68.9 bits (167), Expect = 2.0e-08 Identity = 37/69 (53.62%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Lcy11g016780 vs. NCBI nr
Match: KAA0065792.1 (hypothetical protein E6C27_scaffold37G00900 [Cucumis melo var. makuwa] >TYJ96531.1 hypothetical protein E5676_scaffold546G001850 [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 5.8e-08 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of Lcy11g016780 vs. NCBI nr
Match: KAA0051819.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK21425.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 7.5e-08 Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of Lcy11g016780 vs. NCBI nr
Match: KAA0050626.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK07814.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 4.9e-07 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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