Lcy11g016620 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g016620
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	4-hydroxy-4-methyl-2-oxoglutarate aldolase
Location	Chr11: 40093720 .. 40094223 (+)
RNA-Seq Expression	Lcy11g016620
Synteny	Lcy11g016620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTCCAGCAACAGCAGATATTTGTGATGCAAATGCAGCACACGTCACAAGCGGAGATCTCCGAGTATTGCAATCAGCATTCGAGATTTACGGGCAACGGCGAGCGTTTTTGGGACAAGTAGTGACGGTGAAGGTGTTTGAAGACAATGTTCTGGTGAGACAGCTTCTTGAAAGCAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGGAATGGAAGCAGGAGATGTGCATTGTTGGGAGGCAATCTTGGGCAGTTGGCTCAAAACATGGGGTGGGCTGGCATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAACTGTGATATTGGTGTGAGAGCATTGGGGACTAATCCATTGAAGTCAAACAAGAAAGGTTTAGGAGATAAGCACGTGCCTGTTCAAATTGGTGGGACTCTGATTCATGAAGGAGAGTGGTTGTATGCAGATAGTGATGGCATTTTGGTGTCCAAATTTGAGCTATCTGTTGAATAG

mRNA sequence

ATGGCAGCTCCAGCAACAGCAGATATTTGTGATGCAAATGCAGCACACGTCACAAGCGGAGATCTCCGAGTATTGCAATCAGCATTCGAGATTTACGGGCAACGGCGAGCGTTTTTGGGACAAGTAGTGACGGTGAAGGTGTTTGAAGACAATGTTCTGGTGAGACAGCTTCTTGAAAGCAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGGAATGGAAGCAGGAGATGTGCATTGTTGGGAGGCAATCTTGGGCAGTTGGCTCAAAACATGGGGTGGGCTGGCATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAACTGTGATATTGGTGTGAGAGCATTGGGGACTAATCCATTGAAGTCAAACAAGAAAGGTTTAGGAGATAAGCACGTGCCTGTTCAAATTGGTGGGACTCTGATTCATGAAGGAGAGTGGTTGTATGCAGATAGTGATGGCATTTTGGTGTCCAAATTTGAGCTATCTGTTGAATAG

Coding sequence (CDS)

ATGGCAGCTCCAGCAACAGCAGATATTTGTGATGCAAATGCAGCACACGTCACAAGCGGAGATCTCCGAGTATTGCAATCAGCATTCGAGATTTACGGGCAACGGCGAGCGTTTTTGGGACAAGTAGTGACGGTGAAGGTGTTTGAAGACAATGTTCTGGTGAGACAGCTTCTTGAAAGCAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGGAATGGAAGCAGGAGATGTGCATTGTTGGGAGGCAATCTTGGGCAGTTGGCTCAAAACATGGGGTGGGCTGGCATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAACTGTGATATTGGTGTGAGAGCATTGGGGACTAATCCATTGAAGTCAAACAAGAAAGGTTTAGGAGATAAGCACGTGCCTGTTCAAATTGGTGGGACTCTGATTCATGAAGGAGAGTGGTTGTATGCAGATAGTGATGGCATTTTGGTGTCCAAATTTGAGCTATCTGTTGAATAG

Protein sequence

MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLESKGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGTNPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSVE

Homology

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BLAST of Lcy11g016620 vs. ExPASy Swiss-Prot
Match: Q9FH13 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g56260 PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.1e-68
Identity = 125/166 (75.30%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAA ATA+ CD+NA  +++GDLR L   F+IYGQRR F G +VT+KVFEDNVLVR  LE+
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KGEG VLVIDG GS RCAL+GGNLGQLAQN GW+GIVVNGC+RDVDEIN+CD+GVRALG+
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKS KKG G+K+VPV IGGTLI +GEWLYADSDGIL+SK ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]

BLAST of Lcy11g016620 vs. ExPASy Swiss-Prot
Match: Q9FFE0 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g16450 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-60
Identity = 113/166 (68.07%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MA   TA++CDAN   + SG LR LQ  F+IYG+R+ F G VVTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KG GRVLV+DG GS+RCA+LGGN    AQN GWAGIVVNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKGLG++ VPV I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of Lcy11g016620 vs. ExPASy Swiss-Prot
Match: Q9M8R9 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=At3g02770 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-58
Identity = 110/166 (66.27%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MA   TA++CDAN   + SG LR LQ  F+IYG+R+ F G VVTVKVFEDN L+R  LE 
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KG GRVLV+DG GS RCA+LGGN    AQN GWAGI+VNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKGLG++ V + I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of Lcy11g016620 vs. ExPASy Swiss-Prot
Match: Q46ZV6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=Reut_A1963 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.3e-49
Identity = 86/159 (54.09%), Postives = 117/159 (73.58%), Query Frame = 0


Query: 6   TADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLESKGEGR 65
           T D+CDAN   +  G LRV+   F  +G+++AF G   T+K+FEDN LVR+ LES G+GR
Sbjct: 5   TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64

Query: 66  VLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGTNPLKS 125
           VLV+DG GS RCAL+GGNLG LA+  GW GI+VNGC+RD  E++ CDIG+RAL  +P KS
Sbjct: 65  VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124

Query: 126 NKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFEL 165
            K+G G++ V VQ+ G ++  G W+Y D+DG+LVS+ +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163

[Close]

BLAST of Lcy11g016620 vs. ExPASy Swiss-Prot
Match: Q13X79 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Paraburkholderia xenovorans (strain LB400) OX=266265 GN=Bxeno_A2772 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.8e-47
Identity = 88/160 (55.00%), Postives = 115/160 (71.88%), Query Frame = 0


Query: 5   ATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLESKGEG 64
           ATAD+CDA+   +  G LRVL+  F ++ +   F G+ VT+KVFEDN LVR  LE KG G
Sbjct: 4   ATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEKGAG 63

Query: 65  RVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGTNPLK 124
           RVLV+DG GS+RCAL+GGNL Q+AQ  GWAGIV+NGC+RD  E+N  ++G+ AL T P +
Sbjct: 64  RVLVVDGGGSQRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRR 123

Query: 125 SNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFEL 165
             K G G++ V VQ+ G L+  GEW+YADSDG+LV+   L
Sbjct: 124 GQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASAAL 163

[Close]

BLAST of Lcy11g016620 vs. ExPASy TrEMBL
Match: A0A6J1GE55 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC111453129 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.6e-83
Identity = 153/167 (91.62%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATADICDANAAHVTSGDLRVLQ  F++YGQRRAF G +VTVKVFEDNVLVRQLLES
Sbjct: 1   MAAPATADICDANAAHVTSGDLRVLQQKFKVYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+MGWAG+VVNGCIRDVDEINNCD+GVRALGT
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSVE 168
           NPLKSNKKGLG+KHVPV IGGTLIHEGEWLYADSDGILVSKFELSVE
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSVE 167

[Close]

BLAST of Lcy11g016620 vs. ExPASy TrEMBL
Match: A0A1S3BKF1 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC103490998 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.0e-82
Identity = 154/166 (92.77%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATAD+CDANAAHVT+GDLRVLQ  FEIYGQRRAF GQ+VTVKVFEDNVLVRQLLE+
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQN GWAGIVVNGCIRDVDEINNCDIGVRALGT
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKG+GDKHV +QIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

[Close]

BLAST of Lcy11g016620 vs. ExPASy TrEMBL
Match: A0A5D3D743 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00240 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.0e-82
Identity = 154/166 (92.77%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATAD+CDANAAHVT+GDLRVLQ  FEIYGQRRAF GQ+VTVKVFEDNVLVRQLLE+
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQN GWAGIVVNGCIRDVDEINNCDIGVRALGT
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKG+GDKHV +QIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

[Close]

BLAST of Lcy11g016620 vs. ExPASy TrEMBL
Match: A0A6J1KXS9 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita maxima OX=3661 GN=LOC111498522 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 153/167 (91.62%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATADICDANAAHV SGDLRVLQ  F+IYGQRRAF G +VTVKVFEDNVLVRQLLES
Sbjct: 1   MAAPATADICDANAAHVISGDLRVLQQKFKIYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+MGWAG+VVNGCIRDVDEINNCD+GVRALGT
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSVE 168
           NPLKSNKKGLG+KHVPV IGGTLIHEGEWLYADSDGILVSKFELSVE
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSVE 167

[Close]

BLAST of Lcy11g016620 vs. ExPASy TrEMBL
Match: A0A0A0L5X9 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_3G044520 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.2e-82
Identity = 152/166 (91.57%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATAD+CDANAAHVT+GDLRVLQ  FEIYGQRRAF GQ+VTVKVFEDNVLVRQLLE+
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQN GWAGIVVNGCIRDVDEINNCD+GVRALG 
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKG+G+KHV +QIGGTLIHEGEWLYADSDGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]

BLAST of Lcy11g016620 vs. NCBI nr
Match: XP_023540534.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pepo] >XP_023540535.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pepo] >KAG7028314.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.8 bits (813), Expect = 5.7e-83
Identity = 154/167 (92.22%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATADICDANAAHVTSGDLRVLQ  F+IYGQRRAF G +VTVKVFEDNVLVRQLLES
Sbjct: 1   MAAPATADICDANAAHVTSGDLRVLQQKFKIYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+MGWAG+VVNGCIRDVDEINNCD+GVRALGT
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSVE 168
           NPLKSNKKGLG+KHVPV IGGTLIHEGEWLYADSDGILVSKFELSVE
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSVE 167

[Close]

BLAST of Lcy11g016620 vs. NCBI nr
Match: KAG6596786.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.8 bits (813), Expect = 5.7e-83
Identity = 154/167 (92.22%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATADICDANAAHVTSGDLRVLQ  F+IYGQRRAF G +VTVKVFEDNVLVRQLLES
Sbjct: 14  MAAPATADICDANAAHVTSGDLRVLQQKFKIYGQRRAFSGPIVTVKVFEDNVLVRQLLES 73

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+MGWAG+VVNGCIRDVDEINNCD+GVRALGT
Sbjct: 74  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 133

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSVE 168
           NPLKSNKKGLG+KHVPV IGGTLIHEGEWLYADSDGILVSKFELSVE
Sbjct: 134 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSVE 180

[Close]

BLAST of Lcy11g016620 vs. NCBI nr
Match: XP_022949864.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita moschata])

HSP 1 Score: 317.4 bits (812), Expect = 7.4e-83
Identity = 153/167 (91.62%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATADICDANAAHVTSGDLRVLQ  F++YGQRRAF G +VTVKVFEDNVLVRQLLES
Sbjct: 1   MAAPATADICDANAAHVTSGDLRVLQQKFKVYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+MGWAG+VVNGCIRDVDEINNCD+GVRALGT
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSVE 168
           NPLKSNKKGLG+KHVPV IGGTLIHEGEWLYADSDGILVSKFELSVE
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSVE 167

[Close]

BLAST of Lcy11g016620 vs. NCBI nr
Match: XP_008448991.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] >XP_008448992.1 PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] >TYK19391.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 315.8 bits (808), Expect = 2.2e-82
Identity = 154/166 (92.77%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATAD+CDANAAHVT+GDLRVLQ  FEIYGQRRAF GQ+VTVKVFEDNVLVRQLLE+
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQN GWAGIVVNGCIRDVDEINNCDIGVRALGT
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKG+GDKHV +QIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

[Close]

BLAST of Lcy11g016620 vs. NCBI nr
Match: XP_023005580.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita maxima] >XP_023005581.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 2.8e-82
Identity = 153/167 (91.62%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAAPATADICDANAAHV SGDLRVLQ  F+IYGQRRAF G +VTVKVFEDNVLVRQLLES
Sbjct: 1   MAAPATADICDANAAHVISGDLRVLQQKFKIYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+MGWAG+VVNGCIRDVDEINNCD+GVRALGT
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSVE 168
           NPLKSNKKGLG+KHVPV IGGTLIHEGEWLYADSDGILVSKFELSVE
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSVE 167

[Close]

BLAST of Lcy11g016620 vs. TAIR 10
Match: AT5G56260.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 259.2 bits (661), Expect = 2.2e-69
Identity = 125/166 (75.30%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MAA ATA+ CD+NA  +++GDLR L   F+IYGQRR F G +VT+KVFEDNVLVR  LE+
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KGEG VLVIDG GS RCAL+GGNLGQLAQN GW+GIVVNGC+RDVDEIN+CD+GVRALG+
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKS KKG G+K+VPV IGGTLI +GEWLYADSDGIL+SK ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]

BLAST of Lcy11g016620 vs. TAIR 10
Match: AT5G16450.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61
Identity = 113/166 (68.07%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MA   TA++CDAN   + SG LR LQ  F+IYG+R+ F G VVTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KG GRVLV+DG GS+RCA+LGGN    AQN GWAGIVVNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKGLG++ VPV I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of Lcy11g016620 vs. TAIR 10
Match: AT5G16450.2 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61
Identity = 113/166 (68.07%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MA   TA++CDAN   + SG LR LQ  F+IYG+R+ F G VVTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KG GRVLV+DG GS+RCA+LGGN    AQN GWAGIVVNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKGLG++ VPV I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of Lcy11g016620 vs. TAIR 10
Match: AT3G02770.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 227.3 bits (578), Expect = 9.4e-60
Identity = 110/166 (66.27%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 1   MAAPATADICDANAAHVTSGDLRVLQSAFEIYGQRRAFLGQVVTVKVFEDNVLVRQLLES 60
           MA   TA++CDAN   + SG LR LQ  F+IYG+R+ F G VVTVKVFEDN L+R  LE 
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINNCDIGVRALGT 120
           KG GRVLV+DG GS RCA+LGGN    AQN GWAGI+VNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGLGDKHVPVQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKGLG++ V + I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

The following BLAST results are available for this feature:

BLAST of Lcy11g016620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH13	3.1e-68	75.30	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX...	[more]
Q9FFE0	1.8e-60	68.07	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX...	[more]
Q9M8R9	1.3e-58	66.27	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX...	[more]
Q46ZV6	7.3e-49	54.09	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensi...	[more]
Q13X79	1.8e-47	55.00	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Paraburkholderia xenovora...	[more]

BLAST of Lcy11g016620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GE55	3.6e-83	91.62	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A1S3BKF1	1.0e-82	92.77	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC1034909...	[more]
A0A5D3D743	1.0e-82	92.77	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1KXS9	1.4e-82	91.62	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0L5X9	5.2e-82	91.57	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_3G0...	[more]

BLAST of Lcy11g016620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540534.1	5.7e-83	92.22	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pep...	[more]
KAG6596786.1	5.7e-83	92.22	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyro...	[more]
XP_022949864.1	7.4e-83	91.62	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita moschata]	[more]
XP_008448991.1	2.2e-82	92.77	PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] ...	[more]
XP_023005580.1	2.8e-82	91.62	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita maxima] >XP_023...	[more]

BLAST of Lcy11g016620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56260.1	2.2e-69	75.30	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G16450.1	1.3e-61	68.07	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G16450.2	1.3e-61	68.07	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT3G02770.1	9.4e-60	66.27	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	PFAM	PF03737	RraA-like	coord: 6..159 e-value: 1.2E-46 score: 158.6
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	CDD	cd16841	RraA_family	coord: 7..160 e-value: 1.13877E-57 score: 175.34
None	No IPR available	GENE3D	3.50.30.40		coord: 2..167 e-value: 5.8E-52 score: 177.7
None	No IPR available	PANTHER	PTHR33254:SF22	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE	coord: 1..166
None	No IPR available	PANTHER	PTHR33254	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED	coord: 1..166
IPR010203	Regulator of ribonuclease activity A	TIGRFAM	TIGR01935	TIGR01935	coord: 6..160 e-value: 9.6E-63 score: 208.5
IPR036704	Ribonuclease E inhibitor RraA/RraA-like superfamily	SUPERFAMILY	89562	RraA-like	coord: 5..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g016620.1	Lcy11g016620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0051252	regulation of RNA metabolic process
molecular_function	GO:0047443	4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0008948	oxaloacetate decarboxylase activity
molecular_function	GO:0008428	ribonuclease inhibitor activity