Lcy11g016550 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g016550
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	N6-adenosine-methyltransferase MT-A70-like
Location	Chr11: 39987715 .. 39988268 (-)
RNA-Seq Expression	Lcy11g016550
Synteny	Lcy11g016550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGAGAAAAACCCAAATCTCGAACTTGAACCAGTTCTTCCCCTTCGGGTCTGGTCCCGTCTCTTCTCTCGACCTCTCTCTCAAGGTCGTATCCTCCTTCAATGGCCGCCCCTTTACTCCCACACCCCTTCTCCCTGAACCCAAAAACAAACCCTCTAAATACCCTTTGTCCCCTGGTAACTCTGTGCCCCACAAATCCCGCCCTAATCTTCTACCTTCAAGAGAAGTGAAACCCACGATTCAGAAGAAACAAAATGCAAAGGCGTTGTTGGAATCGAATTCCGATCGTAAGCAAGCTCGCCAGCAGGACGACTGGAAGTTTTTGATCGACGATAGTGGAAGCCCCTGGTCGGTAGTGCGGTAGATGGTGGCGGTTTGTTTACTTGAGCGGGTGCCCTTTACGACGATTGATTCTTCGATGGTGTTGAGGAAATTGGAGAACGATCAGAAGGCGACAGAGACGGAGAAGGCAGCGCTGCAGGAATTAGGGGGAGATTCCGGTGCGATATTGGCGGTGGAGATGGCTTAGAGGTCGATGGCGGAGGATAG

mRNA sequence

ATGGCTTTGAGAAAAACCCAAATCTCGAACTTGAACCAGTTCTTCCCCTTCGGGTCTGGTCCCGTCTCTTCTCTCGACCTCTCTCTCAAGGTCGTATCCTCCTTCAATGGCCGCCCCTTTACTCCCACACCCCTTCTCCCTGAACCCAAAAACAAACCCTCTAAATACCCTTTGTCCCCTGGTAACTCTGTGCCCCACAAATCCCGCCCTAATCTTCTACCTTCAAGAGAAGTGAAACCCACGATTCAGAAGAAACAAAATGCAAAGGCGTTGTTGGAATCGAATTCCGATCGTAAGCAAGCTCGCCAGCAGGACGACTGGAAGTTTTTGATCGACGATAGTGGAAGCCCCTGGTCGGAAATTGGAGAACGATCAGAAGGCGACAGAGACGGAGAAGGCAGCGCTGCAGGAATTAGGGGGAGATTCCGGTGCGATATTGGCGGTGGAGATGGCTTAGAGGTCGATGGCGGAGGATAG

Coding sequence (CDS)

ATGGCTTTGAGAAAAACCCAAATCTCGAACTTGAACCAGTTCTTCCCCTTCGGGTCTGGTCCCGTCTCTTCTCTCGACCTCTCTCTCAAGGTCGTATCCTCCTTCAATGGCCGCCCCTTTACTCCCACACCCCTTCTCCCTGAACCCAAAAACAAACCCTCTAAATACCCTTTGTCCCCTGGTAACTCTGTGCCCCACAAATCCCGCCCTAATCTTCTACCTTCAAGAGAAGTGAAACCCACGATTCAGAAGAAACAAAATGCAAAGGCGTTGTTGGAATCGAATTCCGATCGTAAGCAAGCTCGCCAGCAGGACGACTGGAAGTTTTTGATCGACGATAGTGGAAGCCCCTGGTCGGAAATTGGAGAACGATCAGAAGGCGACAGAGACGGAGAAGGCAGCGCTGCAGGAATTAGGGGGAGATTCCGGTGCGATATTGGCGGTGGAGATGGCTTAGAGGTCGATGGCGGAGGATAG

Protein sequence

MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSPGNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSEIGERSEGDRDGEGSAAGIRGRFRCDIGGGDGLEVDGGG

Homology

[Close]

BLAST of Lcy11g016550 vs. ExPASy Swiss-Prot
Match: O82486 (N6-adenosine-methyltransferase MT-A70-like OS=Arabidopsis thaliana OX=3702 GN=MTA PE=1 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 4.0e-04
Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0


Query: 22 VSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPL 59
          V SLDLSLK++SSF  RPF  TP LPEPK +   +P+
Sbjct: 46 VPSLDLSLKLISSFTNRPFVATPPLPEPKVEKKHHPI 82

[Close]

BLAST of Lcy11g016550 vs. ExPASy TrEMBL
Match: A0A5A7UFI5 (N6-adenosine-methyltransferase MT-A70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00870 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.5e-33
Identity = 83/121 (68.60%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 1   MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSP 60
           +A   +Q+  L+         VSSLDLSLKVVSSFNGRPFTPTP+LPE KNKPSKYPL  
Sbjct: 26  LAQHSSQLELLSSLESLVPDIVSSLDLSLKVVSSFNGRPFTPTPVLPELKNKPSKYPLLT 85

Query: 61  GNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSE 120
            NS+PHKSRPNLLPS E KPTIQK QNAKA  ESNSDRK+ARQ D  KF +DDSGSP S 
Sbjct: 86  TNSLPHKSRPNLLPSGEAKPTIQKNQNAKAYSESNSDRKRARQPDGGKFSMDDSGSPLSV 145

Query: 121 I 122
           +
Sbjct: 146 V 146

[Close]

BLAST of Lcy11g016550 vs. ExPASy TrEMBL
Match: A0A1S3BJD8 (N6-adenosine-methyltransferase MT-A70-like OS=Cucumis melo OX=3656 GN=LOC103490711 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.5e-33
Identity = 83/121 (68.60%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 1   MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSP 60
           +A   +Q+  L+         VSSLDLSLKVVSSFNGRPFTPTP+LPE KNKPSKYPL  
Sbjct: 26  LAQHSSQLELLSSLESLVPDIVSSLDLSLKVVSSFNGRPFTPTPVLPELKNKPSKYPLLT 85

Query: 61  GNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSE 120
            NS+PHKSRPNLLPS E KPTIQK QNAKA  ESNSDRK+ARQ D  KF +DDSGSP S 
Sbjct: 86  TNSLPHKSRPNLLPSGEAKPTIQKNQNAKAYSESNSDRKRARQPDGGKFSMDDSGSPLSV 145

Query: 121 I 122
           +
Sbjct: 146 V 146

[Close]

BLAST of Lcy11g016550 vs. ExPASy TrEMBL
Match: A0A0A0L4Z1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002960 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 82/121 (67.77%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 1   MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSP 60
           +A   +Q+  L+         VSSLDLSL+VVSSFNGRPFTPTP+LPE KNKPSKYPL  
Sbjct: 26  LAQHSSQLELLSSLESLVPDIVSSLDLSLQVVSSFNGRPFTPTPVLPELKNKPSKYPLLT 85

Query: 61  GNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSE 120
            NS+PHKSRPNLLPS E KPTIQK QNAKA  ESNSDRK+ARQ D  KF +DDSGSP S 
Sbjct: 86  TNSLPHKSRPNLLPSGEAKPTIQKNQNAKAYTESNSDRKRARQPDGGKFSMDDSGSPLSV 145

Query: 121 I 122
           +
Sbjct: 146 V 146

[Close]

BLAST of Lcy11g016550 vs. ExPASy TrEMBL
Match: A0A6J1HLA1 (N6-adenosine-methyltransferase MT-A70-like OS=Cucurbita maxima OX=3661 GN=LOC111465197 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.8e-28
Identity = 76/121 (62.81%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 1   MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSP 60
           +A    Q+  L+         VSSLDLSLKVV+SFNGRPF PTP LPEPKNKPSKYPL  
Sbjct: 27  LAQHSNQLELLSSLEALVPDLVSSLDLSLKVVTSFNGRPFAPTPALPEPKNKPSKYPLVA 86

Query: 61  GNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSE 120
            NS+PHK+R N L S E KP IQK QNAKA  ESNSDRK+ARQ D  KF +DDSG+P S 
Sbjct: 87  TNSMPHKTRLNPLSSGEAKPGIQKNQNAKAFPESNSDRKRARQTDGGKFSMDDSGNPLSV 146

Query: 121 I 122
           +
Sbjct: 147 V 147

[Close]

BLAST of Lcy11g016550 vs. ExPASy TrEMBL
Match: A0A6J1GFZ8 (N6-adenosine-methyltransferase MT-A70-like OS=Cucurbita moschata OX=3662 GN=LOC111453835 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.8e-28
Identity = 73/102 (71.57%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 20  GPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSPGNSVPHKSRPNLLPSREVK 79
           G VSSLDLSLK+VSSFNGR FTPTP+LPEPKNKPSKYPLS  +++ HKSRPNLLPS E K
Sbjct: 46  GIVSSLDLSLKLVSSFNGRSFTPTPVLPEPKNKPSKYPLSSSDAMLHKSRPNLLPSGEAK 105

Query: 80  PTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSEI 122
           P IQK +NAK+  E NSDRK+ RQ D  KF IDDS SP S +
Sbjct: 106 PAIQKNRNAKSYPELNSDRKRVRQPDGGKFSIDDSRSPLSVV 147

[Close]

BLAST of Lcy11g016550 vs. NCBI nr
Match: XP_008448574.1 (PREDICTED: N6-adenosine-methyltransferase MT-A70-like [Cucumis melo] >KAA0052976.1 N6-adenosine-methyltransferase MT-A70-like [Cucumis melo var. makuwa] >TYK11432.1 N6-adenosine-methyltransferase MT-A70-like [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 83/121 (68.60%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 1   MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSP 60
           +A   +Q+  L+         VSSLDLSLKVVSSFNGRPFTPTP+LPE KNKPSKYPL  
Sbjct: 26  LAQHSSQLELLSSLESLVPDIVSSLDLSLKVVSSFNGRPFTPTPVLPELKNKPSKYPLLT 85

Query: 61  GNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSE 120
            NS+PHKSRPNLLPS E KPTIQK QNAKA  ESNSDRK+ARQ D  KF +DDSGSP S 
Sbjct: 86  TNSLPHKSRPNLLPSGEAKPTIQKNQNAKAYSESNSDRKRARQPDGGKFSMDDSGSPLSV 145

Query: 121 I 122
           +
Sbjct: 146 V 146

[Close]

BLAST of Lcy11g016550 vs. NCBI nr
Match: XP_031738811.1 (N6-adenosine-methyltransferase MT-A70-like [Cucumis sativus] >KAE8650010.1 hypothetical protein Csa_011178 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-32
Identity = 82/121 (67.77%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 1   MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSP 60
           +A   +Q+  L+         VSSLDLSL+VVSSFNGRPFTPTP+LPE KNKPSKYPL  
Sbjct: 26  LAQHSSQLELLSSLESLVPDIVSSLDLSLQVVSSFNGRPFTPTPVLPELKNKPSKYPLLT 85

Query: 61  GNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSE 120
            NS+PHKSRPNLLPS E KPTIQK QNAKA  ESNSDRK+ARQ D  KF +DDSGSP S 
Sbjct: 86  TNSLPHKSRPNLLPSGEAKPTIQKNQNAKAYTESNSDRKRARQPDGGKFSMDDSGSPLSV 145

Query: 121 I 122
           +
Sbjct: 146 V 146

[Close]

BLAST of Lcy11g016550 vs. NCBI nr
Match: XP_038876592.1 (N6-adenosine-methyltransferase MT-A70-like [Benincasa hispida])

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-31
Identity = 81/121 (66.94%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 1   MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSP 60
           +A   +Q+  L+         VSSLDLSL+VVSSFNGRPFTPTP+LPEPKNKPSKYPL  
Sbjct: 27  LAQHSSQLELLSSLQSLVPDIVSSLDLSLQVVSSFNGRPFTPTPILPEPKNKPSKYPLLT 86

Query: 61  GNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSE 120
            NSVPHK RPNLL S E KPTIQK QNAKA  ESNSD K+ RQQD  KF +DDSGSP S 
Sbjct: 87  TNSVPHKPRPNLLLSGEAKPTIQKNQNAKAYPESNSDPKRPRQQDGGKFSMDDSGSPLSV 146

Query: 121 I 122
           +
Sbjct: 147 V 147

[Close]

BLAST of Lcy11g016550 vs. NCBI nr
Match: XP_022965286.1 (N6-adenosine-methyltransferase MT-A70-like [Cucurbita maxima])

HSP 1 Score: 135.6 bits (340), Expect = 3.8e-28
Identity = 76/121 (62.81%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 1   MALRKTQISNLNQFFPFGSGPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSP 60
           +A    Q+  L+         VSSLDLSLKVV+SFNGRPF PTP LPEPKNKPSKYPL  
Sbjct: 27  LAQHSNQLELLSSLEALVPDLVSSLDLSLKVVTSFNGRPFAPTPALPEPKNKPSKYPLVA 86

Query: 61  GNSVPHKSRPNLLPSREVKPTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSE 120
            NS+PHK+R N L S E KP IQK QNAKA  ESNSDRK+ARQ D  KF +DDSG+P S 
Sbjct: 87  TNSMPHKTRLNPLSSGEAKPGIQKNQNAKAFPESNSDRKRARQTDGGKFSMDDSGNPLSV 146

Query: 121 I 122
           +
Sbjct: 147 V 147

[Close]

BLAST of Lcy11g016550 vs. NCBI nr
Match: XP_022950866.1 (N6-adenosine-methyltransferase MT-A70-like [Cucurbita moschata])

HSP 1 Score: 135.6 bits (340), Expect = 3.8e-28
Identity = 73/102 (71.57%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 20  GPVSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPLSPGNSVPHKSRPNLLPSREVK 79
           G VSSLDLSLK+VSSFNGR FTPTP+LPEPKNKPSKYPLS  +++ HKSRPNLLPS E K
Sbjct: 46  GIVSSLDLSLKLVSSFNGRSFTPTPVLPEPKNKPSKYPLSSSDAMLHKSRPNLLPSGEAK 105

Query: 80  PTIQKKQNAKALLESNSDRKQARQQDDWKFLIDDSGSPWSEI 122
           P IQK +NAK+  E NSDRK+ RQ D  KF IDDS SP S +
Sbjct: 106 PAIQKNRNAKSYPELNSDRKRVRQPDGGKFSIDDSRSPLSVV 147

[Close]

BLAST of Lcy11g016550 vs. TAIR 10
Match: AT4G10760.1 (mRNAadenosine methylase )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0


Query: 22 VSSLDLSLKVVSSFNGRPFTPTPLLPEPKNKPSKYPL 59
          V SLDLSLK++SSF  RPF  TP LPEPK +   +P+
Sbjct: 46 VPSLDLSLKLISSFTNRPFVATPPLPEPKVEKKHHPI 82

The following BLAST results are available for this feature:

BLAST of Lcy11g016550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82486	4.0e-04	59.46	N6-adenosine-methyltransferase MT-A70-like OS=Arabidopsis thaliana OX=3702 GN=MT...	[more]

BLAST of Lcy11g016550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFI5	5.5e-33	68.60	N6-adenosine-methyltransferase MT-A70-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BJD8	5.5e-33	68.60	N6-adenosine-methyltransferase MT-A70-like OS=Cucumis melo OX=3656 GN=LOC1034907...	[more]
A0A0A0L4Z1	1.2e-32	67.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002960 PE=4 SV=1	[more]
A0A6J1HLA1	1.8e-28	62.81	N6-adenosine-methyltransferase MT-A70-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GFZ8	1.8e-28	71.57	N6-adenosine-methyltransferase MT-A70-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Lcy11g016550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448574.1	1.1e-32	68.60	PREDICTED: N6-adenosine-methyltransferase MT-A70-like [Cucumis melo] >KAA0052976...	[more]
XP_031738811.1	2.5e-32	67.77	N6-adenosine-methyltransferase MT-A70-like [Cucumis sativus] >KAE8650010.1 hypot...	[more]
XP_038876592.1	2.8e-31	66.94	N6-adenosine-methyltransferase MT-A70-like [Benincasa hispida]	[more]
XP_022965286.1	3.8e-28	62.81	N6-adenosine-methyltransferase MT-A70-like [Cucurbita maxima]	[more]
XP_022950866.1	3.8e-28	71.57	N6-adenosine-methyltransferase MT-A70-like [Cucurbita moschata]	[more]

BLAST of Lcy11g016550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10760.1	2.8e-05	59.46	mRNAadenosine methylase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g016550.1	Lcy11g016550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043414	macromolecule methylation
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0008168	methyltransferase activity