Lcy11g015390 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g015390
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zf-RVT domain-containing protein
Location	Chr11: 35905283 .. 35916094 (+)
RNA-Seq Expression	Lcy11g015390
Synteny	Lcy11g015390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATAAAATTAAGGATAACTTTAGTGCCCTCGAGGCAGAGGAGATTTTAAATATGCCTCTAGTTTCGGGGGACTCTAAAGATGAGATCATTTGGAAATTCGACAAAAGAGGTCTATTCTCCGTTAAAAGTGCTTATCAGATTGCGATAGCCATCTTAGATAAGGATGAAGCATCATCCTCGGATCCTTCTAACCAAGTTCGTCTATGGAAATATCTCTGGAAACTCAAGATCCCCCCTAGAGCTAAAATCTGCAGCTGGAAAATTATAAAGAACGATATTCCTTCCAAGGTCAACATTCAATCTAAAGGGGTCGATGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACTGTTCGTAGTTAATTTTGTTTCTACTAAAATACCAATGCGTTGGCAAAAGGTTAAGCAGTGAGAAACATACCTTCGTTGACGACTCTGAATTCTTCAAGAACGCCTTTCTTGATTGCTCTGCAACAACGAAGAACACCACCATTTGATCTTCCCCGCTACAACTCTGAGATTAGGAACGTAGTTGTGGGACTACCTAATCTTGAATGGGAAAAAAACTCTAGATAGAAAATTCTCCCTAGAGTTCTTGAGTTGAGAGAATATGAGAGGGCCTTATGGTGGCCATATGTTGTGGTACCTAAACCCTAGGGTTAGTGTTCTATTTATAGGAGAAAGGCCATGAATAAAATATTCATTTAAAATCAATTATTTCCATAACTGATTTAATCTTTTCCATAATCAATCAATTCCATAACCAATCAATTCCATAATTGATTAATCCTTTCCATAAATGATTGATCACTTCCATAAGTGATTACTCATTTCCATAATTGATTAATTACCAATTAATTAATTCTTTAATTAATTAATCACCAATTAAATATCATATATTTAATTTCAGACCTTCTATTAGTTAATTAATTAATTACCCAATTAAATATCATATATTTAATTTCAGACCTTCAATTAATTAATTCCATAATATGAATCAAATTCATATTAAAATTTGAACTCCTTCAAATTCTCTTATATCCTATAAATTTAATATGAATCAAATTCATATTAATATTTGAATTTCTTCAAATATTTATTTCTCTCATAGACTATAGTTTAATTAAATCTCGTTTAATTTAAACTAAATTGAATAATTAATTAATTCATAATTAATTAATTCATCTTCTAATTAAATACCATTTAATTAGACATATATTTGAACTCTTTCAAATATATTCAATCTCTCAATATAATAAAGTTTAATCTCAAATTAGACTTTATATTTTAATGCATCACTATACATTATATTAATTTGTATCTCATACAATTAACTTAATTCCCAATATGAATTTGAACTATTCAAATTCTCTCAAGATATATTTGTTCCTAATTACTCTTTACGAGCTAGCATGGGGACCTAATGGACCTACAGATCAGAAGCTCCAATGATATGAGGTTAACTGATTAAACTCATTAATCAAGTTAACCAATTCATTAACTGTGGGTCAATCCACTAAAGACCCACAGCTGAACTCTTCTCACGGTAGAACATTTCTGTGTCCATGGATGTAGACCTATGCCGGTAAGTCAATCCTTCACGAGTGTTCGTAACCACGGCTGGGTCAAATTACCGTTTTACCCCTGTGTTACATCTGTCTCCTTAAGTACCGGCGCTCCTCTAATGAACAACCTGTTTATGGTCCAACCATTAAACAGAAAGTCCCTCTCGGGCCAGTGACAGGACGGGATCCCTTTGTTCAAGTCCTGGAGTCACCACTTAAGGGAACACTCATCTATTTCTCCTAGAAGTGGGAAGGAGTGAATTCCATCTTGTGTTGTCATGTCCCCAACCCCACACTCGGTCTTGTCCCCAAGAAGGTAGGCTTATTGAGTCGGTGTGCAGGCCACTCTTACCCATACTAATCAAAGGACAACCCCTCGTGAGAAGGAGTTCATGACACACTCAGGATTAAGACTGAGTTACCTAGTTCATCCTATTGAAACAGTAACCTAACTAGTTAACGGTGTTACATCTAGTGGTTTACTATTTTGTGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCGCTCGCATGTCTCCTACATGGACGCATTGGATTAATACGCCTGTATCGAATACAAAGCGGGTCGTATCACATAGTGTTACTAGGATAAGGTACCCAACCTTATCCTTGTACTATAGACCTTTTAGGTTGTTACTTGAACACCAATCCCTGTATGTCCCCACATACTAGTTCAAGTCACATGTAAACAACCTTGGATCTTAGTTTATTGGATTTGGGTCAAATTGTGCAATATTTAACAATAACACTTTATTGTAGAAACTCAATTACACTTTATTGAAAAAAGTATACAATTTGTTTACATTCACTATCTACGAGTTTTAGGGCATAAAGCCCAACAAACTCCCACTTGAACTAAAACTCTAGTTTAGTGGGATGTACAATAATCTATACAGCACTGGGTGTATAAATACATGTATAAAACATATACAATGTACAGATACAATAAACTAGGGCATCACTATACCCATTACATAATGGTATCACTATACCCATTACATTTCTCCTACTTGCCCTAGATTACATCTTTGTACATATCTGGTAGATCTAGACCTTCTAGATGACCCTCAAACACTTTAGCCGAGAGAGTCTTTGTAAGTGAATCATCAATATTTCATTCAATTTAATGTGTGCTTGTCTTGGGTTGCGATGTTCTTTTGAATTTGCCACAACACCACTATATCACTATAAAGTGTGATGGGCAAGTTCACATTTGGAACACATTCCAAATCAATCAAGAACTTCCTAAGGCATATACAGTCTCTATCGCTGCTTCATAAGCAACTATGTTTTCGGCCTATATGGTCAAGACTGTAACTATGTCATACTATAGCTCATTTGTAAAGATTGACCATAGATGTTGATGTAGATTTCCTTAAATCCTTATCAGTCTTAAAATCCATGTCAGTGTATCCTGTAAGGATCAAATCCTTAGTCTCATACACGAGCATATAGTTCCTCGTTCTCCTAAGATGCTTGAGGATATTCTTAACGGTTTTCCAGTGATCAAATCTTGGATTAGATTGATACTTACTGACAATCCCTACTGCATAGGGCATTCGTCTCATGTCCTCAACCTCTTGAGGAGTCTTATGAAACATTTTCTTAGACAAAAGAATTTGATATCTGAAAGGTAGTGAACCCTTATTGGAATTCTGCATCTTATATCTAACTAACATTTTGTAGATATAAGACACTTGAGACAAGGCTAGCCTTTTGTTCTTACGGTTCCTAAACAATTTGGATCCCAAGAATAAAATCAGCTTCTCCCAAATTTTCATTTGGAATTGAGTTGCTAGCTCCTTTTACTAGTCAGCAAGATAACCTACATCATTCCCAGTGATTAGGATATCAATCATATACAACACTAAGTAAGCTACTGAACTATTGATGATCACTTGTAAACACAAAACTCATCAATGTTCTGATTAAAGCCAAAAGATTTGGTCACTGTATCAAATCTTATATTTCAAGATCGAAATGCTTAGGTCAATCCATGAATAGATCAATTAAGCTTGCAAACCCTTTTGCTTTTGATCTTGTTGTATGAACCCTTCTGGTTAAGACATGAATGTCTCGTTTCCTCTTGTAAATCCACTTGTAACTAATAGGTGTTACCCATCAAGCAGATCTACAAGATCCCAGATGGAAGTGAAATACAAAAGACTTCATTTCCAAGTCCATGACTTTAATCCATTGGTCCTTGTCAACATCATTCATTTTCTTTCTAAAAGATAATGAACCCACTATGCCATCATCAGGTATGATGTCCTAGGCTTCAAACAAGTCCATGTAACATTCAGGTTATCAAACAACCCTCCCACTACATTGAGGCAATCTCAATTATTGAGAAGGATGTGACTAACTAGATGCACTGATCCATCAACAACTCTTGTTGAACAGTCAGTTTCATCAACAACTCTTGTGGATGTTACTGTAGCTTCATTAGTTAACTTACTTAAACCGACTTTACTCTTGTGGTTTATGATTTGTGATGTGAACTTCTTCTGAGAATTTAACATTTGTCGATACAAATTCTTTATTCTCTTGTGAATTGAAGAAGTATCCACTTCTCGTTTCCTTTGGGGTTGCCTACTACAGTATGCAATGCAATCAACACTGCATGACCCCAAAACGAGCCAGACAATTGAGCATAGCTCAACATGGAATGAACCATATCCAATAGGGTTCTATTTCTCCTATATGAGATTTAGGGTGTGATCCCATGTACTATCAAATAGTTCTGGAATCTCAAATCCCTATACTCAACACTTTGATCAGATCGAAGTGTTTTTATCATCTCACTTAACAAGTTTCCAACTTCAGTCCTAAGCCCCTTCAAATATCTCAAGAGCTATAGACTTAAGTTGCATTAGGTAAAGATACTCATACCTTTGAATAATCATCCAAAAGAGATGAATTATTCATGCCCTCCCACTGCTTTAACATATTGAACCACAAGGATCCAAATGTACAAGCTCCAAGGGCTCTTTGGCTCTTAGATCTTTTCCAGTAAAAGATCTATCAGTCATATTGCCCACAAGGCATGACTTACAAGGTAGTAGAGAGTCATCTTCTAACTCGCTTAGAAGTTCACTCTTGACCAATCTCCCAATCAAATTGAGATTAATATGGTCTACCTTAGAACCAAAGAAAGATATTTTCCTTTAGGAGAAATCCCTTGCCTCTTTTCACATTGAGTAGTAGCAGACTTAAACAACCCAGTGTTTATGATTGTTTTACTCTTGATTAGTCTTAAAACATTTAGGTTACTTTCCAGTAAAGCTAAACAAATGTCGACTCCCTTTCTTGAAACAAAACTGCGCTAGCAGAGAAAGCTAAAAAAATAACATTGTTCCAGCAAATAAGACACAGAAATAAAATTTCTTTTGATCTTAGGAATTACATACACATTATCTAATAGTATGTATTTTCTCCCACTGAGAAAAATAACTTAATGTTCCCCACTGCTATAGCCGAAATAACCTCTCTAATTCTAACTTTGAGAGTTATTACACAAGCAACATGTTGTTGCTAGGAACTTATTCCTTTAAAAGAAGAACACACATGATTTGTGGCCCCTGAATCAAGTATTCGGGGAGAATCACTATTCTTCACTAATCACGTTTTCAAGACAAGTAAATGAAAATTACGATCTTGAACAAGTTCTCTTTTTGCTAAGTAGGGTTCTATGTCATATTCATCAAGAACAATTCTTAATGATTTAAACATATGGGGCATGAGGACATTCCTCAGTTAAGAATAATCCTAGACTTATTTACCACAATTCGTCGTTTAAGCTTGTTGTATTATCGTTATTTATAAAATGACGTAAGACAATACACATAAAATTATTATATAATTGCTGAAGTAACAAATTACTTGTATTATTAATAGCACTAACCCATTACAAATAATCCAATCAATTTCTGCAAAAACAAATAAGAAATCAAAGAAACCCTATAAAACTATTGATTTAGTTTTTGCAACGGTACTTCAAAGGTTTAGAACAACAGCCACCGAAGGGTGGTCAGCTACTCCTCCTCTGAATTGAGACAATATCAACCAAATTCTAACACCAGAATAACTCATATTCCGTTAGCGTTTAGTTACCGTTGTTCGATCAAGGATTAGTTAACACATTTACCTCATTCCCGTAAGTGTAACCCTCCCACTTTCAGATCTCAGAGGCACGCACCAACAGGCTACCGAAGGGAAAGACAACTGTTGGTAATTAGCCTAAGAGTTCCTATCCTATTCAGGAGTTCACGATGTTCCGAATCCTATGATCAGGCCCTCCGAAGGGATGGTTGCGTCAGGACAACCTGCAAGCGGATCATAGGACTCTCACGGTGTGAACTAGGGGTGGAGACCGAGGGATACGTTGACACGTGTCCCGCTCCCACTTACTCTAGACATTTTTCCCATTCACCTTGTTATTGATTCATGAAAACACTTTCCGAAGGAGGCCGCTCCTAGGGCGACTCGAAGCCGAGCATGAACCTCACGTTGTGAATATAGGGACGTAGGAGCAAAACTTGATTTAAATCTCGTTTTGTAATTTTCCTCCCACTAAAAATGTCCTAATGTTAATTTAGGGTTGTTTAACTTAGATTAAATTTGGCTAAGTCAATCTATCTAAGTCTGATCCTATTATAACAATTATGGAAAAGATTCAACCACAATGTTTTAGGTGAATTAAACTTTTTTTAACAAACCCAATATTGCAAGTCAACATTACTATGGTTAATTCAACTCAAGGTTCGGGTCAGTTCCCAGGTAGGAGGTGTTCCGTAAACCGTCAACTTAAATACCCCCAACCTTAGACAGAACTTCACCGAGAGAGTTCCCTTATAATCACAGTAATGTAAGGTCTTTACTCTAAAGATCTAGGTGCATTAAACACTTTTAACAAACCTAGTGAAATTGCATGCTAACATTTAACTATGATTAATTAAACTCCGGTATTCCGGGTCAGTTTCCAGGTAGGAGGTGTTCCGTGAACCGTCAGTTTAAATACCCCCAGCCTTAGACAGAACTTAACCGGTGGAGTTCCCTTATAATCATAGTAATGTTTTTCCTACTTAGTCAATTAAAACTAATTTTAATTCTAAGTAAGAATAATTCTAATCCTATTAGAAATGTGATCTTAGATCTAATTAATTTTAAACATTTTAAAATTAATTCATTTATCCTAAGATCCTATGTTTGCATGCAATTCTTTGTTATAGGTTAACGGTTTCTATTCATTAATTTTATAACTATTATAAAATTTAATGAATTAACCCTATAACATGCTACTATGGTGAATAAATTAACAATCAAATTCTAATTAATTTATAAAACCATACATTAGCATACAAGACATACCATAAATATAACAATTATATTAATCTAAGGTAATGTCATGCTCAATGCAAATTAATTTCCTTTTAATTAACATAACTCTTAAATTAATTATACAAGAAAATTAAAATTAAGCATTACCATTTTCATACATTAACATAACATTTATATTAATAGCTCATGAAAACTAATTAAGCATGTTAATTACTTAATATAAATATAACTCTTATATTTTTAAACTAAAGTAATTTCATGCTCAATGCAAATTAATTTTCTTAAATTAATCTAACTCTTAAATTAATAACCCAAGAAAATTAAAACAAGCATTCACATTTTCATACATTAACATAACACTTTATATTAATAGCTCATGAAAATAAATAAGCAAATAAATTACTTTCATAAATATAACTTTTTATATTTTTACTAAAGTAATTTCATGCTCAATGCTTCTCAATTTTCATCCATTTAATCATAACAATTTATATTAAATACCCATGAAAATTAAATTCATGCATAATACTTATATTATAACAATTATAATTAAAAATGCATGAATATGCTTAATCTATGGTAGGATTAAAAACTATATGGCATTCATAAAGCAATTTAAATAGCTAAGTAGACGGGCTTTGGCATCCTAGGACTCAAAACAATAGAAAAATTACATTAATCAATCTATTAAAGTCCTATCCTGCCGTAAATCAGCCCGAACAACCTCGAACCGCGTCCAAACTCTTCGAACCGGCAAGATATTAAGCTGAACCACACTGAACCAGCTTCAAAACACCTAGAACCGGCTTTAAATGTGACGAACCGAACCAAAAATGGCTCAAACAGCACAAAACCAGGTCGAAACCCCCTTAGACCAGTCAAAACCACGCGAGAACCGGTCAAATCTCGAACGAATCAGTCAAAACTGCCCGAACCGGTCAAACCACGTGCGAACCGGTCAAAACTGCTGGAAACCGGATGAACCGAACCACGAACAAAACTAAACAAATTTAAACGCCGCTGATCAAAATCATGAATAGAACTCACGGATCAGTTGGTTAGTGAAGCTATGGATTTCCTGCGTCCTTCTCTTCAGGCGTGAGTTCGAATACTTACGGACGCAAAACGCCTTTTTTTATTTTTTTTATTTTTAACACGCGAAAATTGACGAAAAAAGACGCTCACGCCAAGACTTGAATAACAGCCCTCACGGTTGACAAGCGCGCGCTCCAACCGCCAAGGTTGCAACCAATATTGAAGAGAAAATCCGATTCCTTTATTTTATTTTATTCTTGTCGCGCGATTTCTTCCTTTTCTGGGTTTTTCCGCTAGCGTTGAGACGCTATTTAGACAGCATCGACGCTGTCTCTCAGATTTCTCGATTTCCAGCTTCTGTTTTGCTTCGATTTAGGCCCCGATTTCTTCAAATCTTCATGGAATTTCACCAAAAACCATTGACACGGACTTACAGACTCGATTGCAATTAAATGCCCAAAACACCGGGCCCTTACATTGATCAAATCAACTAAAAAATTGCAAAACTAATGCCAAAACCTTAAACGTCTACTAGCAAAATCTCATACATCAAATGCATAATTAAATCTCACTAATAGCCAATGCAAATTTTAGAAAAAAACAAAATTGAAATTACGATCGGCTCTGATACCAATTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAGTTAATTTTGTTTCTACTAAAATACCAATGCATTGGCAAAAGGTTAAGCGGTGAGAAACATACCTTCGTTGACGACTCTGAATTCTTCAAGAACGCCTTTCTTGATTGCTCTGCAACAACGAAGAACACCACCATTTGATCTTCCCCGCTATAACTCTGAGATTAGGAACGTAGTTGTGGGACTACCTAATCTTGAATGGGAAAAAAACTCTAGAGAGAAAATTCTCCCTAGAGTTCTTGAGTTGAGAGAATATGAGAGTGCCTTATGGTGGCGGTACCTAAACCCTAGGGTTAGTGTTCTATTTAGAGGAGAAAGGCCATGAATAAAATATTCATTTAAAATCAATTATTTCCATAACTGATTTAATCTTTTCCATAATCAATCAATTCCATAACCAATCAATTCCATAATTGATTAATCTTTTCCATAAATGATTGATCACTTCCATAAGTGATTAATCATTTCCATAATTGATTAATTACCAATTAATTAATTCTTTAATTAATTAATCACCAATTAAATATCATATATTTAATTTCAGATCTTCTATTAGTTAATTAATTAATTACCCAATTAAATATCATATATTTAATTTCAGACCTTCAATTAATTAATTCCATAATATGAATCAAATTCATATTAAAATTTGAACTCCTTCAAATTCTCTTATATCCTATAAATTTAATATGAATCAAATTCATATTAATATTTGAATTTCTTCAAATATTTATTTCTCTCATAGACTATAGTTTAATTAAATCTCGTTTAATTTAAACTAAATTGAATAATTAATTAATTCATAATTAATTAATTCATCTTCTAATTAAATACCATTTAATTAGACATATATTTGAACTCTTTCAAATATATTCAATCTCTCAATATAATAAAGTTTAATCTCAAATTAGACTTTATATTTTAATGCATCACTATACATTATATTAATTTGTATCTCATACAATTAACTTAATTCCCAATATGAATTTGAACTATTCAAATTCTCTCAAGATTTATTTGTTCCTAATTACTCTTTACGAGCTAGTAGGGGGACCTAATGGACCTACAGATCAGAAGCTCCAATGATATGAGGTTAACTGATTAAACTCATTAATCAATTTAACCAATTTATTAACTGTGGGTCATTCCACTAAAGACCCACAACTGAACTCTTCTCACTGTAGAACATTTATGTGTCCATGGATGTAGACCTATGCCGGTAAGTCAATCCTTCACGAGTGTTCGTAACCACGGCTGGGTCAAATTACCGTTTTACCCCTGTGTTACATCTGTCTCCTTAAGTACCGGCGCTCCTCTAATGAACAACCTGTTTATGGTCCAACCATTAAACAGAAAGTCCCTCTCGGGCTAGTGAGAGGGCGGGATCCCTTTTGTTCAAGTCCTGGAGTCACCACTTAAGGGAACACTCATCTACTTCTCCTAGAAGTGGGAAGGAGTGAATTCCATCTTGTGTTGTCATGTCCCCAGCCCCACACTCGGTCTTGTCCCCAAGAAGGTAGGCTTATTGAGTCGGCGTGTAGGCCACTCTCACCCATACTAATCAAAGGACAGCCCCTCGTGAGAAGGAGTTCATGACACACTCAGGATTAAGACTGAGTTACCTAGTTCATCCTATTGAAACAGTAACCTAACTAGTTAACGGTGTTACATCTAGTGGTTTACTATTTCGTGGTCCAGTCTTATGCAAACTCATTGCATAGGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTGGATTAATACGTCTGTATCGAATACAAAGCGGGCCGTATCACATAGTGTTATCAGGATAAGGTACCCAACCTTATCCTTGTACTATAGACCTTTTAGGTTGTTACTTGAACACCAATCCCCGTATGTCCCCACATACTAGTTTAAGTCACATGTAAACAACCTTGGATCTTAGTTTATTGGATTTGAGTCAAATTGTGCAATATTTAACAATAACACTTTATTGTAGAAACTCAATTACACTTTATTGAAACAAGTATACAATTTGTTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACACGATGCTCCTAACTGCTGTTGTTTTTGTAGGAAAGCAAGGGAGTCTACAGTGCACGTGATCTGGGAGTGTAA

mRNA sequence

ATGGAGGATAAAATTAAGGATAACTTTAGTGCCCTCGAGGCAGAGGAGATTTTAAATATGCCTCTAGTTTCGGGGGACTCTAAAGATGAGATCATTTGGAAATTCGACAAAAGAGGTCTATTCTCCGTTAAAAGTGCTTATCAGATTGCGATAGCCATCTTAGATAAGGATGAAGCATCATCCTCGGATCCTTCTAACCAAGAAAGCAAGGGAGTCTACAGTGCACGTGATCTGGGAGTGTAA

Coding sequence (CDS)

ATGGAGGATAAAATTAAGGATAACTTTAGTGCCCTCGAGGCAGAGGAGATTTTAAATATGCCTCTAGTTTCGGGGGACTCTAAAGATGAGATCATTTGGAAATTCGACAAAAGAGGTCTATTCTCCGTTAAAAGTGCTTATCAGATTGCGATAGCCATCTTAGATAAGGATGAAGCATCATCCTCGGATCCTTCTAACCAAGAAAGCAAGGGAGTCTACAGTGCACGTGATCTGGGAGTGTAA

Protein sequence

MEDKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAILDKDEASSSDPSNQESKGVYSARDLGV

Homology

[Close]

BLAST of Lcy11g015390 vs. ExPASy TrEMBL
Match: A0A7N2N4A7 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 3  DKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAILDKDE 59
          DKI+ NF   EAE ILN+PL     KD+IIW  +K G+FSVKSAY +A+ +++K E
Sbjct: 2  DKIRRNFLPFEAETILNIPLSYNLPKDKIIWVGNKCGMFSVKSAYYVALPLVEKSE 57

[Close]

BLAST of Lcy11g015390 vs. ExPASy TrEMBL
Match: A0A072UKI0 (zf-RVT domain-containing protein OS=Medicago truncatula OX=3880 GN=MTR_4g065063 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.0e-06
Identity = 26/58 (44.83%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 2  EDKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAIL-DKDE 59
          E  I++NF+  + +EIL +PL+  +  D IIW+FDK+G++SVKSAY++ + +L ++DE
Sbjct: 14 EPLIRNNFNLRDVDEILKIPLLLREQNDAIIWRFDKKGVYSVKSAYRVCVDVLINRDE 71

[Close]

BLAST of Lcy11g015390 vs. ExPASy TrEMBL
Match: A0A392M2U4 (RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0002376 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 26/57 (45.61%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 3   DKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQI-AIAILDKDE 59
           + I+ NF+  +A EIL +PL+   ++DEIIW++DK+G++SVKSAY++ A  ++D+ E
Sbjct: 771 ESIQTNFNDRDAREILKIPLLPQGAQDEIIWRYDKKGMYSVKSAYRVCADIMIDRSE 827

[Close]

BLAST of Lcy11g015390 vs. ExPASy TrEMBL
Match: Q2HS45 (RNA-directed DNA polymerase (Reverse transcriptase) OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC157503g30v2 PE=4 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 25/58 (43.10%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 2   EDKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAIL-DKDE 59
           E  I++NF+  + +EIL +PL+  +  D IIW+FDK+G++SVK+AY++ + +L ++DE
Sbjct: 541 EPLIRNNFNLRDVDEILKIPLLHCEQNDAIIWRFDKKGVYSVKNAYRVCVDVLINRDE 598

[Close]

BLAST of Lcy11g015390 vs. ExPASy TrEMBL
Match: A0A5B7BF13 (zf-RVT domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_036910 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-05
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 2   EDKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAI------LD 61
           ED+++D F   EAEEI  +PL    S D++IW + K G++SVKS Y IA+ +       +
Sbjct: 270 EDRVRDLFIPFEAEEICAIPLSVHASSDKLIWHYSKNGVYSVKSGYHIAVHLSSSFNAAN 329

Query: 62  KDEASSSDPSNQESKGVYS 75
           K E SS D  N+  K ++S
Sbjct: 330 KGEGSSMDLVNKAWKLLWS 348

[Close]

BLAST of Lcy11g015390 vs. NCBI nr
Match: XP_024042628.1 (uncharacterized protein LOC112099434 [Citrus clementina])

HSP 1 Score: 61.6 bits (148), Expect = 3.5e-06
Identity = 28/69 (40.58%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 7   DNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAILDKDEASSSDPSN 66
           D F   +A+ I+N+PL    S+D++IW +D++G +SVKS YQIA+ +   D  SSS  +N
Sbjct: 356 DQFVQEDADAIMNIPLPRNHSRDQVIWHYDRKGEYSVKSGYQIALKMKVPDTPSSSVNNN 415

Query: 67  QESKGVYSA 76
            +S+ ++ A
Sbjct: 416 NQSENIFHA 424

[Close]

BLAST of Lcy11g015390 vs. NCBI nr
Match: KEH30222.1 (hypothetical protein MTR_4g065063 [Medicago truncatula])

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 26/58 (44.83%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 2  EDKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAIL-DKDE 59
          E  I++NF+  + +EIL +PL+  +  D IIW+FDK+G++SVKSAY++ + +L ++DE
Sbjct: 14 EPLIRNNFNLRDVDEILKIPLLLREQNDAIIWRFDKKGVYSVKSAYRVCVDVLINRDE 71

[Close]

BLAST of Lcy11g015390 vs. NCBI nr
Match: ABD33126.2 (RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula])

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-05
Identity = 25/58 (43.10%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 2   EDKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAIL-DKDE 59
           E  I++NF+  + +EIL +PL+  +  D IIW+FDK+G++SVK+AY++ + +L ++DE
Sbjct: 541 EPLIRNNFNLRDVDEILKIPLLHCEQNDAIIWRFDKKGVYSVKNAYRVCVDVLINRDE 598

[Close]

BLAST of Lcy11g015390 vs. NCBI nr
Match: MCH81586.1 (RNA-directed DNA polymerase (Reverse transcriptase) [Trifolium medium])

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-05
Identity = 26/57 (45.61%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 3   DKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQI-AIAILDKDE 59
           + I+ NF+  +A EIL +PL+   ++DEIIW++DK+G++SVKSAY++ A  ++D+ E
Sbjct: 771 ESIQTNFNDRDAREILKIPLLPQGAQDEIIWRYDKKGMYSVKSAYRVCADIMIDRSE 827

[Close]

BLAST of Lcy11g015390 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 57.0 bits (136), Expect = 8.7e-05
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 2   EDKIKDNFSALEAEEILNMPLVSGDSKDEIIWKFDKRGLFSVKSAYQIAIAILDK 57
           E K++++F   EA+ IL  PL S D  DEIIW  DK G+FSV+SAY + I ++ K
Sbjct: 637 EIKVRESFIVSEADIILQTPLPSQDKDDEIIWGMDKTGIFSVRSAYHLGIQLMLK 691

The following BLAST results are available for this feature:

BLAST of Lcy11g015390 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g015390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7N2N4A7	1.7e-06	53.57	zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A072UKI0	5.0e-06	44.83	zf-RVT domain-containing protein OS=Medicago truncatula OX=3880 GN=MTR_4g065063 ...	[more]
A0A392M2U4	1.1e-05	45.61	RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) OS=Trifolium medi...	[more]
Q2HS45	1.1e-05	43.10	RNA-directed DNA polymerase (Reverse transcriptase) OS=Medicago truncatula OX=38...	[more]
A0A5B7BF13	3.2e-05	40.51	zf-RVT domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_036910 P...	[more]

BLAST of Lcy11g015390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024042628.1	3.5e-06	40.58	uncharacterized protein LOC112099434 [Citrus clementina]	[more]
KEH30222.1	1.0e-05	44.83	hypothetical protein MTR_4g065063 [Medicago truncatula]	[more]
ABD33126.2	2.3e-05	43.10	RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula]	[more]
MCH81586.1	2.3e-05	45.61	RNA-directed DNA polymerase (Reverse transcriptase) [Trifolium medium]	[more]
XP_022155286.1	8.7e-05	49.09	uncharacterized protein LOC111022423 [Momordica charantia]	[more]

BLAST of Lcy11g015390 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g015390.1	Lcy11g015390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009059	macromolecule biosynthetic process
biological_process	GO:0090304	nucleic acid metabolic process
biological_process	GO:0034654	nucleobase-containing compound biosynthetic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0097159	organic cyclic compound binding