Lcy11g015140 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g015140
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DUF4218 domain-containing protein
Location	Chr11: 33626789 .. 33627247 (+)
RNA-Seq Expression	Lcy11g015140
Synteny	Lcy11g015140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAGTTTTATGTTGATTCTTAGGGTGCTAAGAGATCGTATTGGTGGAACTATTGAGTCTGTATTCGATGGAGTAGGCTCTCATGTTCCATGGCCTAAAGAACACGTAATTCTGGACAAAGAAAAAAAGGTATGTTTAGTTAAGAAGCACATGATATATTAGTTTATATATTTTTTTTAATAAGGAATACTTCTTACGTAGGAACCTAAGAAAATGCTACGTGAATTAGCTGCAATAAAGGAGAAGAAGTTAAATAGTCAAGTGTCAAAAGTGCCAGTAGCAGTGAAATACGTATTAGGATTTATAGAGAACATGACAAAGGATTGCTTAGATATTATAGTACCCGATCACGTGTTCGACTTCCACTTCAACTTCCATCTAATGAAAAATAGCATGAAAGAATTTTGCTTGATGGAGGAATTAGCAACCACTATTATAACAATTTATATCGTCTAA

mRNA sequence

ATGCTTAGTTTTATGTTGATTCTTAGGGTGCTAAGAGATCGTATTGGTGGAACTATTGAGTCTGTATTCGATGGAGTAGGCTCTCATGTTCCATGGCCTAAAGAACACGTAATTCTGGACAAAGAAAAAAAGGAACCTAAGAAAATGCTACGTGAATTAGCTGCAATAAAGGAGAAGAAGTTAAATAGTCAAGTGTCAAAAGTGCCAGTAGCAGTGAAATACGTATTAGGATTTATAGAGAACATGACAAAGGATTGCTTAGATATTATAGTACCCGATCACGTGTTCGACTTCCACTTCAACTTCCATCTAATGAAAAATAGCATGAAAGAATTTTGCTTGATGGAGGAATTAGCAACCACTATTATAACAATTTATATCGTCTAA

Coding sequence (CDS)

ATGCTTAGTTTTATGTTGATTCTTAGGGTGCTAAGAGATCGTATTGGTGGAACTATTGAGTCTGTATTCGATGGAGTAGGCTCTCATGTTCCATGGCCTAAAGAACACGTAATTCTGGACAAAGAAAAAAAGGAACCTAAGAAAATGCTACGTGAATTAGCTGCAATAAAGGAGAAGAAGTTAAATAGTCAAGTGTCAAAAGTGCCAGTAGCAGTGAAATACGTATTAGGATTTATAGAGAACATGACAAAGGATTGCTTAGATATTATAGTACCCGATCACGTGTTCGACTTCCACTTCAACTTCCATCTAATGAAAAATAGCATGAAAGAATTTTGCTTGATGGAGGAATTAGCAACCACTATTATAACAATTTATATCGTCTAA

Protein sequence

MLSFMLILRVLRDRIGGTIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKYVLGFIENMTKDCLDIIVPDHVFDFHFNFHLMKNSMKEFCLMEELATTIITIYIV

Homology

[Close]

BLAST of Lcy11g015140 vs. ExPASy TrEMBL
Match: A0A5A7UBK9 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00720 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13
Identity = 45/113 (39.82%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 18  TIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKYVLG 77
           +I S+ D +GSHVPWPK  ++++++KK   K   EL A+K  K      K+P  +++VL 
Sbjct: 405 SIYSIHDAIGSHVPWPKYLIVIEEQKKTSSKKSHELEALKGTKSKMNELKLPTTIRFVLR 464

Query: 78  FIE-NMTKDCLDIIV-PDHVFDFHFNFHLMKNSMKEFCLMEELATTIITIYIV 129
            +E +M  + L I V    +F + FN ++MK+SMK+ CLMEELA ++I  Y++
Sbjct: 465 HVEKDMEDEYLTIPVDTQEIFGYSFNVNVMKDSMKQLCLMEELAFSVILSYMI 517

[Close]

BLAST of Lcy11g015140 vs. ExPASy TrEMBL
Match: A0A5D3D5S7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00800 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 15  IGGTIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKY 74
           I G I SV D +GSHV W K  ++++++KK   K  REL A+K  KL     K+   +++
Sbjct: 164 IVGNIYSVHDAIGSHVSWQKYLIVIEEQKKTSSKKPRELEALKGTKLKMNELKLSTTIRF 223

Query: 75  VLGFIE-NMTKDCLDIIV-PDHVFDFHFNFHLMKNSMKEFCLMEELATTIITIYIV 129
           VL  +E +M  + L I V    +F + FN ++MK+S+K+ CLMEELA ++I  YI+
Sbjct: 224 VLRHVEKDMNDEYLTIPVDTQEIFGYSFNVNVMKDSIKQLCLMEELALSVILSYII 279

[Close]

BLAST of Lcy11g015140 vs. ExPASy TrEMBL
Match: A0A5A7VPW2 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00380 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.3e-12
Identity = 44/114 (38.60%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 17  GTIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKYVL 76
           G+I SV D +GSHVPW K  + ++++KK   K  REL A+K  K      K+P+ +++VL
Sbjct: 499 GSIYSVHDAIGSHVPWRKYLIAIEEQKKTSSKKCRELEALKGTKSKMNELKLPLTIRFVL 558

Query: 77  GFIENMTKDCLDIIVPD--HVFDFHFNFHLMKNSMKEFCLMEELATTIITIYIV 129
             +E   KD    I  D   +  + FN ++MK+S+K+ CLMEEL  ++I  Y++
Sbjct: 559 KHVEKDMKDEYLTIPVDTQELLGYSFNVNVMKDSIKQLCLMEELTLSVILSYMI 612

[Close]

BLAST of Lcy11g015140 vs. ExPASy TrEMBL
Match: A0A5A7U7P3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00230 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.7e-12
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 10  VLRDRIGGTIESVF---DGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVS 69
           V R R+G     VF   D +GSHV WPK  ++++++KK   K  REL A+K  KL     
Sbjct: 166 VYRVRLGEGDVWVFIELDAIGSHVSWPKYLIVIEEQKKTSSKKSRELEALKGTKLKMNEL 225

Query: 70  KVPVAVKYVLGFIENMTKDCLDIIVPD--HVFDFHFNFHLMKNSMKEFCLMEELATTIIT 129
           K+   +++VL  +E    D   II  D   +F + FN ++MK+S+K+ CLM+ELA ++I 
Sbjct: 226 KLSTTIRFVLSHVEKDMNDEYLIIPVDTQEIFGYSFNVNVMKDSIKQLCLMDELALSVIL 285

[Close]

BLAST of Lcy11g015140 vs. ExPASy TrEMBL
Match: A0A5A7SX35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00040 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 7.4e-12
Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 15  IGGTIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKY 74
           I G+I SV D +G HVPWPK  ++++++KK   K   EL A+K  K      K+P  +++
Sbjct: 119 IVGSIYSVHDAIGLHVPWPKYLIVIEEQKKTSSKKSCELEALKGTKSKMNELKLPTTIRF 178

Query: 75  VLGFIENMTKD-CLDIIV-PDHVFDFHFNFHLMKNSMKEFCLMEELATTII 124
           VL  +E   KD  L I V  + +F + FN ++MK+S+K+ CLME LA ++I
Sbjct: 179 VLRHVEKDMKDEYLTIPVDTEEIFGYSFNVNVMKDSIKQLCLMEGLAISVI 229

[Close]

BLAST of Lcy11g015140 vs. NCBI nr
Match: KAA0053273.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-13
Identity = 45/113 (39.82%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 18  TIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKYVLG 77
           +I S+ D +GSHVPWPK  ++++++KK   K   EL A+K  K      K+P  +++VL 
Sbjct: 405 SIYSIHDAIGSHVPWPKYLIVIEEQKKTSSKKSHELEALKGTKSKMNELKLPTTIRFVLR 464

Query: 78  FIE-NMTKDCLDIIV-PDHVFDFHFNFHLMKNSMKEFCLMEELATTIITIYIV 129
            +E +M  + L I V    +F + FN ++MK+SMK+ CLMEELA ++I  Y++
Sbjct: 465 HVEKDMEDEYLTIPVDTQEIFGYSFNVNVMKDSMKQLCLMEELAFSVILSYMI 517

[Close]

BLAST of Lcy11g015140 vs. NCBI nr
Match: TYK18876.1 (uncharacterized protein E5676_scaffold204G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 2.4e-12
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 15  IGGTIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKY 74
           I G I SV D +GSHV W K  ++++++KK   K  REL A+K  KL     K+   +++
Sbjct: 164 IVGNIYSVHDAIGSHVSWQKYLIVIEEQKKTSSKKPRELEALKGTKLKMNELKLSTTIRF 223

Query: 75  VLGFIE-NMTKDCLDIIV-PDHVFDFHFNFHLMKNSMKEFCLMEELATTIITIYIV 129
           VL  +E +M  + L I V    +F + FN ++MK+S+K+ CLMEELA ++I  YI+
Sbjct: 224 VLRHVEKDMNDEYLTIPVDTQEIFGYSFNVNVMKDSIKQLCLMEELALSVILSYII 279

[Close]

BLAST of Lcy11g015140 vs. NCBI nr
Match: KAA0067725.1 (uncharacterized protein E6C27_scaffold352G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 9.0e-12
Identity = 44/114 (38.60%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 17  GTIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKYVL 76
           G+I SV D +GSHVPW K  + ++++KK   K  REL A+K  K      K+P+ +++VL
Sbjct: 499 GSIYSVHDAIGSHVPWRKYLIAIEEQKKTSSKKCRELEALKGTKSKMNELKLPLTIRFVL 558

Query: 77  GFIENMTKDCLDIIVPD--HVFDFHFNFHLMKNSMKEFCLMEELATTIITIYIV 129
             +E   KD    I  D   +  + FN ++MK+S+K+ CLMEEL  ++I  Y++
Sbjct: 559 KHVEKDMKDEYLTIPVDTQELLGYSFNVNVMKDSIKQLCLMEELTLSVILSYMI 612

[Close]

BLAST of Lcy11g015140 vs. NCBI nr
Match: KAA0051220.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-11
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 10  VLRDRIGGTIESVF---DGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVS 69
           V R R+G     VF   D +GSHV WPK  ++++++KK   K  REL A+K  KL     
Sbjct: 166 VYRVRLGEGDVWVFIELDAIGSHVSWPKYLIVIEEQKKTSSKKSRELEALKGTKLKMNEL 225

Query: 70  KVPVAVKYVLGFIENMTKDCLDIIVPD--HVFDFHFNFHLMKNSMKEFCLMEELATTIIT 129
           K+   +++VL  +E    D   II  D   +F + FN ++MK+S+K+ CLM+ELA ++I 
Sbjct: 226 KLSTTIRFVLSHVEKDMNDEYLIIPVDTQEIFGYSFNVNVMKDSIKQLCLMDELALSVIL 285

[Close]

BLAST of Lcy11g015140 vs. NCBI nr
Match: KAA0034021.1 (uncharacterized protein E6C27_scaffold65G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11
Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 15  IGGTIESVFDGVGSHVPWPKEHVILDKEKKEPKKMLRELAAIKEKKLNSQVSKVPVAVKY 74
           I G+I SV D +G HVPWPK  ++++++KK   K   EL A+K  K      K+P  +++
Sbjct: 119 IVGSIYSVHDAIGLHVPWPKYLIVIEEQKKTSSKKSCELEALKGTKSKMNELKLPTTIRF 178

Query: 75  VLGFIENMTKD-CLDIIV-PDHVFDFHFNFHLMKNSMKEFCLMEELATTII 124
           VL  +E   KD  L I V  + +F + FN ++MK+S+K+ CLME LA ++I
Sbjct: 179 VLRHVEKDMKDEYLTIPVDTEEIFGYSFNVNVMKDSIKQLCLMEGLAISVI 229

The following BLAST results are available for this feature:

BLAST of Lcy11g015140 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g015140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBK9	2.3e-13	39.82	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102...	[more]
A0A5D3D5S7	1.1e-12	40.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VPW2	4.3e-12	38.60	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7U7P3	5.7e-12	37.90	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00230 P...	[more]
A0A5A7SX35	7.4e-12	40.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy11g015140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053273.1	4.8e-13	39.82	putative transposase [Cucumis melo var. makuwa]	[more]
TYK18876.1	2.4e-12	40.52	uncharacterized protein E5676_scaffold204G00800 [Cucumis melo var. makuwa]	[more]
KAA0067725.1	9.0e-12	38.60	uncharacterized protein E6C27_scaffold352G00380 [Cucumis melo var. makuwa]	[more]
KAA0051220.1	1.2e-11	37.90	transposase [Cucumis melo var. makuwa]	[more]
KAA0034021.1	1.5e-11	40.54	uncharacterized protein E6C27_scaffold65G00040 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy11g015140 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g015140.1	Lcy11g015140.1	mRNA