Lcy11g014670 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g014670
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
LocationChr11: 30885937 .. 30888179 (-)
RNA-Seq ExpressionLcy11g014670
SyntenyLcy11g014670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATACGGCAAATCCAACTGTAGATGTGAAACACCACAATCTAATAGTAAAAATGTGTCCAAAAATGTTGTTTATAAAGTCATTCTCTTATAATAACCAATTTATTAAATACTTCTTTGTTTCTTTATTTCTTTTCTCCACAAATCAATCTCCTTTGGAGAATACTAAAAAATTAATTATGAGGTAATAAACTATCTTTATGTCACTTTTTTTTTAATCAATTTCAATTTATAATTTTTTTATTTTAATTCCATTGTATGTATTTTACTTTTAAGTTTTTTAACATCCATGTTCTTTATAATATCGATCTCTTTCATTACTTTTTAATTTCACGGGACTATAGTGGATAATCTTTGCTTCTCTTTTTTGTCCGTACAAATTTAACAAATTCTTATTTTTGTCATTCAATCTTTGCTGACAGTATGCGACACTTCAAGATGATGTATCCATTGATAGAAGGGTTGAATGGTTGCAATTTATGCTCGAGGGACACGACTATTTAGGACGTAGTTACGCATTGAAACCACACGTCCATTAGCCAATGGGTGTGATTCAAACAGTAAAATTGTTCCTAAAATGTTGTTAATCAAGGTTCAATTTGTTAAATATTTATTTCTTTATTTCTTTATTTTCTATAAACCAATCTATTTGAAGAACATCAAACAAATATCCGTGAGATAAATAAACTATCTTATTATATCATTTTTTTTTTATTATCAATTCCAATTTATATTTTTTCGTTCAATCTTTGTTGACAGTACACTACTCTTCGAATTGAGGCATCCATTGAGATAATGATTTCAATTAAAACAATAAGCTTTCACGTGCATTGCACGTGTTTTTTAACTAGTATATATAAAATGTAAAAAAGCGTGCAGAACTAAAAAAATGCAGCAACTACGTATTATACAACTCAAACTCAGGCCGTTCCACTGGGCGTGAGGGGGGGCTTCCGTCAATAACCACCAGACCAACAGATATTTTTGTTACATAAGATTAATTATTTTATATATAATATTTAATGTCTGAAAGTTGAGGAGGGGCTCGAGCCCCCCCTGGGCCTACAGTAAATCCGCCGCTGCGTGTTTGGTTGGAAAGTTGCTCTCAAATCGTATCATCTCCCCTGTAGCTATTAAGAACGCGTTGAAAGGTGCCTGGAAGACAAGAAGCAATTTTAGCAAAGAAACAATAGGAAGAAATATATTCAATTTCAAATTTGAAAACTCAGTTGACAGGGAATGGGTGTTGTGTAATGGCCCCTGGACTTTTGACAAAGACTTTATTGTAATTGAAATTCCCAAAGCAAATCAAAGATCTATAGAGCTAGAATTCAAGAATGTAGATCTTTGGATAAGACTCATCAATTTGCCAATGGGATTTAGAAATAAAGCAGTAGCAAAGAAAGTAGGGGATAGCATCGGTACCTACCTGGAGTCAGGAGAAAATAAGGAGGGAACAAGCGGGGGTCAAAGTATACGAATGCGAGTAGGATTTGATATTACTAAACCTCTTCTTAGAGGCTTTATGTTAAAGGCACCTGGTATTCAAGAAAGTTGTTGGGTTACCATCCGCTATGAGAAACTTCCAGAGTTTTGCTTTTATTGTGGTAGAATTGGTCATGTGGCCAAAGAGTGCCAAGAAATAAGGGGTGAAGTTCCAGCAAACCTGGAAGATCTAGAGTTTGGCAGCTGGTTAAGATATCAATACTTTCCAAGAACGGGCAAGAGGAAAGAATCCCCAGAAAGAAGATTTAATAACCAAGGTGAGGAAGCTGAGTTGCATCCAGAAGATATAAGGAAAGAAGCAGAAAATAATTCTAAAGATAAAGGGAAAGAACAAATTAGAGATAGTCAAGCCTCAGAAGTTCGTATTGTGGATATTGGGGGAATAAGAGATGAGGGCACTTCTTCTTGGACATATGACCTAAATACATCTGTTGATGGAGCAATTGAAAGCCAAGATCCATTATATGAGGAACATCTTAAATTAGACCAGACAATGGAGGATCAATGCAAAACACGGGAAAATCATGCTGAACCAAAAGTATTAACAAAAAGAAAGTCGAGTTGGAAGAGGAGGAATAAAACAGGAATTGGGAATTATGAGAAAAAGAATCCAGATTCTCACAAAAGGAAAGCTCCAGAAGAGGCTAGGGGGGAAAGGAAGAAACAGATGACTGAGGAACTAATGGAGTTGGATACCAATGGCAGTGATATTCAAAGGGCAGTGGCTGGAAAGTAG

mRNA sequence

ATGTATACGGCAAATCCAACTGTAGATGTGAAACACCACAATCTAATATTGAGGAGGGGCTCGAGCCCCCCCTGGGCCTACAGTAAATCCGCCGCTGCGTGTTTGGTTGGAAAGTTGCTCTCAAATCGTATCATCTCCCCTGTAGCTATTAAGAACGCGTTGAAAGGTGCCTGGAAGACAAGAAGCAATTTTAGCAAAGAAACAATAGGAAGAAATATATTCAATTTCAAATTTGAAAACTCAGTTGACAGGGAATGGGTGTTGTGTAATGGCCCCTGGACTTTTGACAAAGACTTTATTGTAATTGAAATTCCCAAAGCAAATCAAAGATCTATAGAGCTAGAATTCAAGAATGTAGATCTTTGGATAAGACTCATCAATTTGCCAATGGGATTTAGAAATAAAGCAGTAGCAAAGAAAGTAGGGGATAGCATCGGTACCTACCTGGAGTCAGGAGAAAATAAGGAGGGAACAAGCGGGGGTCAAAGTATACGAATGCGAGTAGGATTTGATATTACTAAACCTCTTCTTAGAGGCTTTATGTTAAAGGCACCTGGTATTCAAGAAAGTTGTTGGGTTACCATCCGCTATGAGAAACTTCCAGAGTTTTGCTTTTATTGTGGTAGAATTGGTCATGTGGCCAAAGAGTGCCAAGAAATAAGGGGTGAAGTTCCAGCAAACCTGGAAGATCTAGAGTTTGGCAGCTGGTTAAGATATCAATACTTTCCAAGAACGGGCAAGAGGAAAGAATCCCCAGAAAGAAGATTTAATAACCAAGGTGAGGAAGCTGAGTTGCATCCAGAAGATATAAGGAAAGAAGCAGAAAATAATTCTAAAGATAAAGGGAAAGAACAAATTAGAGATAGTCAAGCCTCAGAAGTTCGTATTGTGGATATTGGGGGAATAAGAGATGAGGGCACTTCTTCTTGGACATATGACCTAAATACATCTGTTGATGGAGCAATTGAAAGCCAAGATCCATTATATGAGGAACATCTTAAATTAGACCAGACAATGGAGGATCAATGCAAAACACGGGAAAATCATGCTGAACCAAAAGTATTAACAAAAAGAAAGTCGAGTTGGAAGAGGAGGAATAAAACAGGAATTGGGAATTATGAGAAAAAGAATCCAGATTCTCACAAAAGGAAAGCTCCAGAAGAGGCTAGGGGGGAAAGGAAGAAACAGATGACTGAGGAACTAATGGAGTTGGATACCAATGGCAGTGATATTCAAAGGGCAGTGGCTGGAAAGTAG

Coding sequence (CDS)

ATGTATACGGCAAATCCAACTGTAGATGTGAAACACCACAATCTAATATTGAGGAGGGGCTCGAGCCCCCCCTGGGCCTACAGTAAATCCGCCGCTGCGTGTTTGGTTGGAAAGTTGCTCTCAAATCGTATCATCTCCCCTGTAGCTATTAAGAACGCGTTGAAAGGTGCCTGGAAGACAAGAAGCAATTTTAGCAAAGAAACAATAGGAAGAAATATATTCAATTTCAAATTTGAAAACTCAGTTGACAGGGAATGGGTGTTGTGTAATGGCCCCTGGACTTTTGACAAAGACTTTATTGTAATTGAAATTCCCAAAGCAAATCAAAGATCTATAGAGCTAGAATTCAAGAATGTAGATCTTTGGATAAGACTCATCAATTTGCCAATGGGATTTAGAAATAAAGCAGTAGCAAAGAAAGTAGGGGATAGCATCGGTACCTACCTGGAGTCAGGAGAAAATAAGGAGGGAACAAGCGGGGGTCAAAGTATACGAATGCGAGTAGGATTTGATATTACTAAACCTCTTCTTAGAGGCTTTATGTTAAAGGCACCTGGTATTCAAGAAAGTTGTTGGGTTACCATCCGCTATGAGAAACTTCCAGAGTTTTGCTTTTATTGTGGTAGAATTGGTCATGTGGCCAAAGAGTGCCAAGAAATAAGGGGTGAAGTTCCAGCAAACCTGGAAGATCTAGAGTTTGGCAGCTGGTTAAGATATCAATACTTTCCAAGAACGGGCAAGAGGAAAGAATCCCCAGAAAGAAGATTTAATAACCAAGGTGAGGAAGCTGAGTTGCATCCAGAAGATATAAGGAAAGAAGCAGAAAATAATTCTAAAGATAAAGGGAAAGAACAAATTAGAGATAGTCAAGCCTCAGAAGTTCGTATTGTGGATATTGGGGGAATAAGAGATGAGGGCACTTCTTCTTGGACATATGACCTAAATACATCTGTTGATGGAGCAATTGAAAGCCAAGATCCATTATATGAGGAACATCTTAAATTAGACCAGACAATGGAGGATCAATGCAAAACACGGGAAAATCATGCTGAACCAAAAGTATTAACAAAAAGAAAGTCGAGTTGGAAGAGGAGGAATAAAACAGGAATTGGGAATTATGAGAAAAAGAATCCAGATTCTCACAAAAGGAAAGCTCCAGAAGAGGCTAGGGGGGAAAGGAAGAAACAGATGACTGAGGAACTAATGGAGTTGGATACCAATGGCAGTGATATTCAAAGGGCAGTGGCTGGAAAGTAG

Protein sequence

MYTANPTVDVKHHNLILRRGSSPPWAYSKSAAACLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVLCNGPWTFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTYLESGENKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIGHVAKECQEIRGEVPANLEDLEFGSWLRYQYFPRTGKRKESPERRFNNQGEEAELHPEDIRKEAENNSKDKGKEQIRDSQASEVRIVDIGGIRDEGTSSWTYDLNTSVDGAIESQDPLYEEHLKLDQTMEDQCKTRENHAEPKVLTKRKSSWKRRNKTGIGNYEKKNPDSHKRKAPEEARGERKKQMTEELMELDTNGSDIQRAVAGK
Homology
BLAST of Lcy11g014670 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.8e-41
Identity = 119/357 (33.33%), Postives = 177/357 (49.58%), Query Frame = 0

Query: 32  AACLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVLCNG 91
           A  LVGKLL+ RIIS   +   L  AWK     + E+IG+N+F F F    D   V+  G
Sbjct: 39  AYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTG 98

Query: 92  PWTFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTYLES 151
           PW FDK  IV++ P +++   ELEF  V  WI L +LPM + NK +A ++G++IG +++ 
Sbjct: 99  PWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDV 158

Query: 152 GENKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIG 211
             N++G S G S+R+RV  DITKPL RG  +   G    CW+ I+YE+LP+FC++CG IG
Sbjct: 159 DCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIG 218

Query: 212 HVAKECQ-EIRGEVPANLEDLEFGSWLRY---QYFPRTGKRKESPERRFNNQGEEAELHP 271
           H + +C          +    E+G WLR+   +   + G++ +SP R             
Sbjct: 219 HSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAR------------- 278

Query: 272 EDIRKEAENNSKDKGKEQIR------------DSQASEVRIVDIGGIRDEGT-------- 331
           ED    +  NSK++G E+ +             SQA+  +  D GG R   T        
Sbjct: 279 EDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQAAAEQTGDAGG-RASATGCALGMES 338

Query: 332 SSWTYDLNTSVDGAIESQDPLYEEHLKLDQTMEDQCKTRENHAEPKVLTKRKSSWKR 365
           +SW + +N     +  S+  L  + L              N  +PK L  + SS  R
Sbjct: 339 NSWDHSINDFPKSSQGSRKKLMSDVL--------------NKRKPKDLMNQNSSGAR 367

BLAST of Lcy11g014670 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.0e-41
Identity = 84/207 (40.58%), Postives = 127/207 (61.35%), Query Frame = 0

Query: 35  LVGKLLSNRIISPVAIKNALKGAWKTRSN-FSKETIGRNIFNFKFENSVDREWVLCNGPW 94
           L+ KLLS R IS   +KN LK AWK     FS + IG NIF F F  S DR  +L  GPW
Sbjct: 42  LICKLLSKRSISCTVLKNTLKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPW 101

Query: 95  TFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTYLESGE 154
           TFD+  I+I+ P +  + ++++F+NV LW+   +L +   NK +A ++G++IG + +   
Sbjct: 102 TFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVES 161

Query: 155 NKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIGHV 214
           N      G  +R+RV FD+ KPL RG  L   G    CW+ I+YE+LP+F ++CGR+ H+
Sbjct: 162 NANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHI 221

Query: 215 AKECQEIRGEVPANLEDLEFGSWLRYQ 241
            K+C +    V +  ++L++G WLR+Q
Sbjct: 222 LKDCSDCC--VDSVSKNLQYGPWLRFQ 246

BLAST of Lcy11g014670 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-37
Identity = 80/228 (35.09%), Postives = 132/228 (57.89%), Query Frame = 0

Query: 29  KSAAACLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVL 88
           +S +  L+GK ++N++I+  A K+ +   W+T++  + E +G NIF F+F+N  DR+ +L
Sbjct: 35  QSLSLSLIGKAITNKVINREAFKSTISTIWQTKNEVTMELMGINIFKFRFQNYWDRKRIL 94

Query: 89  CNGPWTFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTY 148
             GPW FDK  +V+     +++  +L+F+ V  WI+L NLP+   N+ +   +G  +G  
Sbjct: 95  EGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQV 154

Query: 149 LESGENKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCG 208
            E    + G   GQ IR+RV  D+  PL RG  +     ++   V I YE+LP FC+YCG
Sbjct: 155 KEIDAGESGECVGQFIRIRVLIDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYCG 214

Query: 209 RIGHVAKECQEIRGEVPANLEDLEFGSWLRYQYFPR---TGKRKESPE 254
           +IGH+ ++C     E+ ++    +FG W+R     R   TG++K SPE
Sbjct: 215 KIGHLVRDCPLNTKEITSS-SSFKFGPWMRAVSRTRSKGTGEKKNSPE 261

BLAST of Lcy11g014670 vs. ExPASy TrEMBL
Match: A0A392M033 (CCHC-type domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001115 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-35
Identity = 94/308 (30.52%), Postives = 161/308 (52.27%), Query Frame = 0

Query: 29  KSAAACLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVL 88
           +S +  LVGK+ +    +  A K  +  AW++R+    + + +N++ FKF    + + V 
Sbjct: 29  ESFSRTLVGKIWTESPYNIRAFKQTMTQAWRSRNPIEIQDLNKNLYLFKFATKREADLVY 88

Query: 89  CNGPWTFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTY 148
            NGPW+FD++ +++ I   N++  EL   +V  W+R+ +LP+  R++ +AKK+G+++GT+
Sbjct: 89  RNGPWSFDRNLLILNIISGNEQPSELAMDHVSFWVRVYDLPLKLRSEGIAKKLGNTVGTF 148

Query: 149 LESGENKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCG 208
            E  + KE    G+ +RMRV  D+ KPL RG  L   G  +  WV  +YE+LP FCF CG
Sbjct: 149 -EEMDFKEINRMGKFLRMRVSVDLKKPLKRGTKLNFQG--KEIWVDYKYERLPNFCFACG 208

Query: 209 RIGHVAKECQEIRGEVPANLEDLE-----FGSWLRYQYFPRTGKRKESPERRFNNQGEEA 268
           RIGH  ++C++I         +LE     FG WLR    P   K     ++  ++     
Sbjct: 209 RIGHQMRDCEDIEDHDEVQYSELEEKQQAFGPWLRASPLP---KMSYEVKKESSSSNCSK 268

Query: 269 ELHPEDIRKEAENNSKDK------GKEQIRDSQASEVRIVDIGGIRD-EGTSSWTYDLNT 325
            L P     + +N+   K       ++++ D Q S+ +I      +D EG +S   ++  
Sbjct: 269 SLFPSTSNSKGQNSGTAKEMDEEVEQQRVSDDQHSQQKITKGNMSKDAEGDTSKQQNVQK 328

BLAST of Lcy11g014670 vs. ExPASy TrEMBL
Match: A0A5C7HA98 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_022651 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.4e-35
Identity = 83/228 (36.40%), Postives = 121/228 (53.07%), Query Frame = 0

Query: 32  AACLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVLCNG 91
           A CL GK+LS  +++  A ++ +   WK R     E +  N++ F F+ S DR  V  +G
Sbjct: 2   ALCLAGKILSPDLVNRDAFRSLISRIWKVRGGVEIEVVTNNVYAFHFQLSEDRRKVFTSG 61

Query: 92  PWTFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTYLES 151
           PW FD   IV+E P        L+F  VD W+++ NLPM    K +A+ +G  IG   E 
Sbjct: 62  PWNFDDSLIVLEEPTGTGSIKGLKFDRVDFWVQISNLPMLCMTKEIAEFLGGIIGEVREV 121

Query: 152 GENKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIG 211
                G   G+ +R+RV  DITKPL R   +   G +E   + I+YE+LP FCF CG +G
Sbjct: 122 DSGPTGDCLGKFVRVRVAVDITKPLRRFLHVDVLGDEEETVMPIQYERLPSFCFRCGLLG 181

Query: 212 HVAKECQEIRGEVPANLEDLEFGSWLRYQYFPR-TGKRKESPERRFNN 259
           H    C E     P N +D  +G+W+R    P+  G R+ +P  R+N+
Sbjct: 182 HTVHGCPEGDCHSPINSKDFLYGAWMRATIPPKPVGNREWNP--RYNS 227

BLAST of Lcy11g014670 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 179.1 bits (453), Expect = 7.9e-41
Identity = 119/357 (33.33%), Postives = 177/357 (49.58%), Query Frame = 0

Query: 32  AACLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVLCNG 91
           A  LVGKLL+ RIIS   +   L  AWK     + E+IG+N+F F F    D   V+  G
Sbjct: 39  AYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTG 98

Query: 92  PWTFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTYLES 151
           PW FDK  IV++ P +++   ELEF  V  WI L +LPM + NK +A ++G++IG +++ 
Sbjct: 99  PWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDV 158

Query: 152 GENKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIG 211
             N++G S G S+R+RV  DITKPL RG  +   G    CW+ I+YE+LP+FC++CG IG
Sbjct: 159 DCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIG 218

Query: 212 HVAKECQ-EIRGEVPANLEDLEFGSWLRY---QYFPRTGKRKESPERRFNNQGEEAELHP 271
           H + +C          +    E+G WLR+   +   + G++ +SP R             
Sbjct: 219 HSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAR------------- 278

Query: 272 EDIRKEAENNSKDKGKEQIR------------DSQASEVRIVDIGGIRDEGT-------- 331
           ED    +  NSK++G E+ +             SQA+  +  D GG R   T        
Sbjct: 279 EDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQAAAEQTGDAGG-RASATGCALGMES 338

Query: 332 SSWTYDLNTSVDGAIESQDPLYEEHLKLDQTMEDQCKTRENHAEPKVLTKRKSSWKR 365
           +SW + +N     +  S+  L  + L              N  +PK L  + SS  R
Sbjct: 339 NSWDHSINDFPKSSQGSRKKLMSDVL--------------NKRKPKDLMNQNSSGAR 367

BLAST of Lcy11g014670 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-40
Identity = 84/207 (40.58%), Postives = 127/207 (61.35%), Query Frame = 0

Query: 35  LVGKLLSNRIISPVAIKNALKGAWKTRSN-FSKETIGRNIFNFKFENSVDREWVLCNGPW 94
           L+ KLLS R IS   +KN LK AWK     FS + IG NIF F F  S DR  +L  GPW
Sbjct: 42  LICKLLSKRSISCTVLKNTLKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPW 101

Query: 95  TFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTYLESGE 154
           TFD+  I+I+ P +  + ++++F+NV LW+   +L +   NK +A ++G++IG + +   
Sbjct: 102 TFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVES 161

Query: 155 NKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIGHV 214
           N      G  +R+RV FD+ KPL RG  L   G    CW+ I+YE+LP+F ++CGR+ H+
Sbjct: 162 NANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHI 221

Query: 215 AKECQEIRGEVPANLEDLEFGSWLRYQ 241
            K+C +    V +  ++L++G WLR+Q
Sbjct: 222 LKDCSDCC--VDSVSKNLQYGPWLRFQ 246

BLAST of Lcy11g014670 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 166.8 bits (421), Expect = 4.1e-37
Identity = 77/217 (35.48%), Postives = 123/217 (56.68%), Query Frame = 0

Query: 34  CLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVLCNGPW 93
           CLVGKLL+ R  +  A+KN L   W+         IG N+F F F + VD+  VL +GPW
Sbjct: 39  CLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPW 98

Query: 94  TFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTYLESGE 153
           TFDK  +++     N +  +++   V  W+ + NLP+   NK V + VG+++G +++   
Sbjct: 99  TFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDY 158

Query: 154 NKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIGHV 213
              G   G+++R+RV  D+ KPL RG  L A    E  WV  +YE+LP +C++CGR+GH 
Sbjct: 159 EDGGIVWGRTMRIRVALDVRKPLRRGMKL-ALSSAEPIWVDFKYERLPIYCYFCGRLGHS 218

Query: 214 AKECQE-IRGEVPANLEDLEFGSWLRYQYFPRTGKRK 250
            +EC + +     + ++ L++G+WLR       G R+
Sbjct: 219 ERECDDKLSSADGSRVDSLQYGAWLRMDNIKSKGSRR 254

BLAST of Lcy11g014670 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 166.8 bits (421), Expect = 4.1e-37
Identity = 77/217 (35.48%), Postives = 123/217 (56.68%), Query Frame = 0

Query: 34  CLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVLCNGPW 93
           CLVGKLL+ R  +  A+KN L   W+         IG N+F F F + VD+  VL NGPW
Sbjct: 39  CLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPW 98

Query: 94  TFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTYLESGE 153
           TFDK  +++     N +  +++   V  W+ + NLP+   NK V + VG+++G +++   
Sbjct: 99  TFDKHLLMLGEMDPNVQPSDIQLTGVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDY 158

Query: 154 NKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIGHV 213
              G + G+++R+RV  D+ KPL RG  L A    +  WV  +YE+LP +C++CGR+GH 
Sbjct: 159 EDGGIAWGRTMRIRVAIDVRKPLRRGMKL-ALSSADPIWVDFKYERLPIYCYFCGRLGHS 218

Query: 214 AKECQE-IRGEVPANLEDLEFGSWLRYQYFPRTGKRK 250
            +EC + +       ++ L++G+WLR       G R+
Sbjct: 219 DRECDDKLSFADGTRVDSLQYGAWLRMDNIKSKGSRR 254

BLAST of Lcy11g014670 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 166.0 bits (419), Expect = 6.9e-37
Identity = 80/228 (35.09%), Postives = 132/228 (57.89%), Query Frame = 0

Query: 29  KSAAACLVGKLLSNRIISPVAIKNALKGAWKTRSNFSKETIGRNIFNFKFENSVDREWVL 88
           +S +  L+GK ++N++I+  A K+ +   W+T++  + E +G NIF F+F+N  DR+ +L
Sbjct: 35  QSLSLSLIGKAITNKVINREAFKSTISTIWQTKNEVTMELMGINIFKFRFQNYWDRKRIL 94

Query: 89  CNGPWTFDKDFIVIEIPKANQRSIELEFKNVDLWIRLINLPMGFRNKAVAKKVGDSIGTY 148
             GPW FDK  +V+     +++  +L+F+ V  WI+L NLP+   N+ +   +G  +G  
Sbjct: 95  EGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQV 154

Query: 149 LESGENKEGTSGGQSIRMRVGFDITKPLLRGFMLKAPGIQESCWVTIRYEKLPEFCFYCG 208
            E    + G   GQ IR+RV  D+  PL RG  +     ++   V I YE+LP FC+YCG
Sbjct: 155 KEIDAGESGECVGQFIRIRVLIDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYCG 214

Query: 209 RIGHVAKECQEIRGEVPANLEDLEFGSWLRYQYFPR---TGKRKESPE 254
           +IGH+ ++C     E+ ++    +FG W+R     R   TG++K SPE
Sbjct: 215 KIGHLVRDCPLNTKEITSS-SSFKFGPWMRAVSRTRSKGTGEKKNSPE 261

BLAST of Lcy11g014670 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-09
Identity = 52/226 (23.01%), Postives = 93/226 (41.15%), Query Frame = 0

Query: 63  NFSKETIGRNI----FNFKFENSVDREWVLCNGPWTFDKDFIVIEIPKANQRSIELEFKN 122
           N  +E +GR +      F F++      +L  GPW+F+    VI+  +  +   + EFK 
Sbjct: 47  NVDEEVVGRILEIHKIEFLFQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKR 106

Query: 123 VDLWIRLINLPMGFRNKAVAKKVGDSIGTYLESGENKEGTSGGQSIRMRVGFDITKPLLR 182
           +  WI++  +P+ F    +   +G+ +G +LE+                +G D++     
Sbjct: 107 IPFWIQIRGIPLRFLTARIITSIGERMGLFLET---------------NLGRDVS----- 166

Query: 183 GFMLKAPGIQESCWVTIRYEKLPEFCFYCGRIGHVAKECQEIRGEVP-ANLEDLEFGSWL 242
             +LK            +YEKL  FC  CG + H A EC     + P A+ +D +  +  
Sbjct: 167 --VLK-----------FQYEKLKNFCTTCGMLSHDASECPTSGNQGPHADDDDDDDDNDA 226

Query: 243 RYQYFPRTGKRKESPERRFNNQGEEAELHPEDIRKEAENNSKDKGK 284
              +    G   +      N Q      HPE+  ++   N+  +GK
Sbjct: 227 NEDHPDVPGDNPDQVHGPMNQQ------HPEESTEDEHQNAPKRGK 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU553.8e-4133.33uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ15.0e-4140.58uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A5C7H9Y23.3e-3735.09CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A392M0331.1e-3530.52CCHC-type domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A... [more]
A0A5C7HA982.4e-3536.40CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02265... [more]
Match NameE-valueIdentityDescription
XP_022156185.17.9e-4133.33uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.11.0e-4040.58uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_028122006.14.1e-3735.48uncharacterized protein LOC114319195 [Camellia sinensis][more]
XP_028124075.14.1e-3735.48uncharacterized protein LOC114321128 [Camellia sinensis][more]
TXG54013.16.9e-3735.09hypothetical protein EZV62_019269 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
AT3G42140.11.0e-0923.01zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 203..219
e-value: 0.0034
score: 26.4
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 204..219
score: 10.180168
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 32..168
e-value: 1.2E-23
score: 83.3
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 170..218
e-value: 8.7E-15
score: 54.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..418
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 32..271
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 32..271
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 203..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g014670.1Lcy11g014670.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding