Lcy11g014610 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g014610
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein BPS1
LocationChr11: 30324635 .. 30325548 (+)
RNA-Seq ExpressionLcy11g014610
SyntenyLcy11g014610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGCCGAAAAGGAGGGTAAAATAGGAATTGAAAGGCAAAATCGTTGTGCCGTGGAAAGAACCACTGCCTTGAAAGCAAAACTCGGCACGACCTCGGTGCTAAATCGTTTAATTGTCTGTATGCTCTCCAAGGTTAACACAACCTCCGAAACAGACGTGCACTCGTCAGGACGGAGTGGAATCAATCTCGTGCTCAAGAAAGGAAAATGAAAGCAGAGAGGAGAAGAATAGAGAATGAGATGGGATGATCAGGAAGGTAGGGGAAGGGCTCTATTTAGAGTGTAGAAGTGACCAAAATTAGAATTAGAATATTTAAAATTAAAATTCCAAAAAAACAGTGGCCACACACGTGTCCTTTGACCAGCTCCTTTTCCTCTGCAGATGCCACGTGTCCTTAGACTTCTTTAGTCACTTCCTTCGAGCCTGCCACGTAGATTTGACTAAGCAATAAGAAGAAGAAAGTCCCAAAAATAAGCCCAAGCCCGAGCCCGAGCCGGACGACGGCGCGCGCGTATGGGCCTTGGTCTTGGCTTACCTCACATCAAGTTTATAAGCCTAATACACAACAAGTGCTTTTAAATTAGCTTTCCAAGAGCTACGCTTCCGATTTTGGACAAAACTATTTGTCATTCCCAACAGTGTATTGTTGATCTTAGTCAAGCTCGGTTGACGCTTTCTCATGCTTTGAGCTTGGTGGAGGCTTCTCCTTTCTCTACAATTGATCGTTTGAAACCTATAGGATCAATCAGTTCCAGAAGGGCTCAATCAAGGAAGGTGAAAGTGGAGAGATAAGTGTGGAAGTTGTGAAATCTGGGAAAGAATCGGTGGTTTATCGTGCTTTGATGATTATGAAGCGGATTGGTTTGTGGGTTTGTGGGATTTTGATTTCTGGATTAAGGGGAGATACATGA

mRNA sequence

ATGTTAGCCGAAAAGGAGGGTAAAATAGGAATTGAAAGGCAAAATCGTTGTGCCGTGGAAAGAACCACTGCCTTGAAAGCAAAACTCGGCACGACCTCGGTGCTAAATCGTTTAATTGTCTGTATGCTCTCCAAGGTTAACACAACCTCCGAAACAGACGTGCACTCGATCAATCAGTTCCAGAAGGGCTCAATCAAGGAAGGTGAAAGTGGAGAGATAAGTGTGGAAGTTGTGAAATCTGGGAAAGAATCGGTGGTTTATCGTGCTTTGATGATTATGAAGCGGATTGGTTTGTGGGTTTGTGGGATTTTGATTTCTGGATTAAGGGGAGATACATGA

Coding sequence (CDS)

ATGTTAGCCGAAAAGGAGGGTAAAATAGGAATTGAAAGGCAAAATCGTTGTGCCGTGGAAAGAACCACTGCCTTGAAAGCAAAACTCGGCACGACCTCGGTGCTAAATCGTTTAATTGTCTGTATGCTCTCCAAGGTTAACACAACCTCCGAAACAGACGTGCACTCGATCAATCAGTTCCAGAAGGGCTCAATCAAGGAAGGTGAAAGTGGAGAGATAAGTGTGGAAGTTGTGAAATCTGGGAAAGAATCGGTGGTTTATCGTGCTTTGATGATTATGAAGCGGATTGGTTTGTGGGTTTGTGGGATTTTGATTTCTGGATTAAGGGGAGATACATGA

Protein sequence

MLAEKEGKIGIERQNRCAVERTTALKAKLGTTSVLNRLIVCMLSKVNTTSETDVHSINQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGDT
Homology
[Close]
BLAST of Lcy11g014610 vs. ExPASy TrEMBL
Match: A0A5D3BNK7 (Protein BPS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00170 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0 

Query: 58  NQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           + F K  IKEGE+GEI VEV KS KE VV+RALMIMK+IGLWVCGI+ISGL GD
Sbjct: 125 SSFSKEPIKEGENGEICVEVEKSEKELVVHRALMIMKQIGLWVCGIVISGLSGD 178

[Close]
BLAST of Lcy11g014610 vs. ExPASy TrEMBL
Match: A0A0A0LD05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G686210 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 7.9e-10
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 58  NQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           + F K  IKEGE+ EI VEV KS K+ VV+RALMIMK+IGLWVCGI+ISGL GD
Sbjct: 132 SSFSKEPIKEGENVEICVEVEKSEKKLVVHRALMIMKQIGLWVCGIVISGLSGD 185

[Close]
BLAST of Lcy11g014610 vs. ExPASy TrEMBL
Match: A0A6J1DI81 (uncharacterized protein LOC111020287 OS=Momordica charantia OX=3673 GN=LOC111020287 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.7e-09
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 58  NQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           + F + SIK   +GEI +EV KSGK+SVVYR+LMIM++I LWVCGI+ISGL G+
Sbjct: 149 SSFTRDSIKGDGTGEICLEVAKSGKDSVVYRSLMIMQQISLWVCGIVISGLSGN 202

[Close]
BLAST of Lcy11g014610 vs. ExPASy TrEMBL
Match: A0A5B7BUA7 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041499 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-04
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 65  IKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           IKEGE+   + E + SGKE V+ +ALM+MK IG WVCG+++SGL GD
Sbjct: 169 IKEGETE--NEERLSSGKELVIQQALMVMKSIGFWVCGVVLSGLCGD 213

[Close]
BLAST of Lcy11g014610 vs. NCBI nr
Match: KAA0048399.1 (protein BPS1 [Cucumis melo var. makuwa] >TYJ99875.1 protein BPS1 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 5.1e-11
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0 

Query: 58  NQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           + F K  IKEGE+GEI VEV KS KE VV+RALMIMK+IGLWVCGI+ISGL GD
Sbjct: 125 SSFSKEPIKEGENGEICVEVEKSEKELVVHRALMIMKQIGLWVCGIVISGLSGD 178

[Close]
BLAST of Lcy11g014610 vs. NCBI nr
Match: XP_038905091.1 (uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905092.1 uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905093.1 uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905094.1 uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905095.1 uncharacterized protein LOC120091232 [Benincasa hispida])

HSP 1 Score: 75.5 bits (184), Expect = 3.3e-10
Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 58  NQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           + F K  IKEGE+GEI VE+ KS KE VV RALMIMK+IGLWVCGI+ISGL GD
Sbjct: 150 SSFNKEPIKEGENGEICVELEKSEKELVVCRALMIMKQIGLWVCGIVISGLSGD 203

[Close]
BLAST of Lcy11g014610 vs. NCBI nr
Match: XP_022152601.1 (uncharacterized protein LOC111020287 [Momordica charantia])

HSP 1 Score: 69.7 bits (169), Expect = 1.8e-08
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 58  NQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           + F + SIK   +GEI +EV KSGK+SVVYR+LMIM++I LWVCGI+ISGL G+
Sbjct: 149 SSFTRDSIKGDGTGEICLEVAKSGKDSVVYRSLMIMQQISLWVCGIVISGLSGN 202

[Close]
BLAST of Lcy11g014610 vs. NCBI nr
Match: KAG6606891.1 (Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-07
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 0 

Query: 58  NQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           + F+  SIK GE GEISVEV  S KESVV RAL IMK+IG WVCG++ISGL G+
Sbjct: 170 SSFKNSSIK-GEIGEISVEVKNSEKESVVNRALTIMKQIGSWVCGLVISGLSGE 222

[Close]
BLAST of Lcy11g014610 vs. NCBI nr
Match: KAG7036596.1 (Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-07
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 0 

Query: 58  NQFQKGSIKEGESGEISVEVVKSGKESVVYRALMIMKRIGLWVCGILISGLRGD 112
           + F+  SIK GE GEISVEV  S KESVV RAL IMK+IG WVCG++ISGL G+
Sbjct: 148 SSFKNSSIK-GEIGEISVEVKNSEKESVVNRALTIMKQIGSWVCGLVISGLSGE 200

The following BLAST results are available for this feature:
BLAST of Lcy11g014610 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy11g014610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BNK72.5e-1174.07Protein BPS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00170 P... [more]
A0A0A0LD057.9e-1070.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G686210 PE=4 SV=1[more]
A0A6J1DI818.7e-0962.96uncharacterized protein LOC111020287 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A5B7BUA75.0e-0457.45Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041499... [more]
BLAST of Lcy11g014610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048399.15.1e-1174.07protein BPS1 [Cucumis melo var. makuwa] >TYJ99875.1 protein BPS1 [Cucumis melo v... [more]
XP_038905091.13.3e-1072.22uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905092.1 unchara... [more]
XP_022152601.11.8e-0862.96uncharacterized protein LOC111020287 [Momordica charantia][more]
KAG6606891.13.4e-0766.67Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7036596.13.4e-0766.67Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
BLAST of Lcy11g014610 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g014610.1Lcy11g014610.1mRNA