Lcy11g014050 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGATGTCTGGTTCGTTGTGGGTTGCCTGGGTTGAGGCTTATATCTTGTGTGCGCGGTCTCTGTGGACTGTTTGCCCCTCTTCGCGGTGGTCTTGGTGTTGGAGAGCGATTCTTAGTCTTCGGGATCAATTTTGGTCACTCATTCGTTTCCGCATTGGTGATGGAAGGAGATGTCTTACATGGGTGGATCCGTGGTTGCCTAAGGGTTCTATTATTCCTCGTTTTTCTGAGAGGGTTATTTATGATGTTGCTAGCTCGTTGTATGCTCCTGTGGCTGATTTCCTCTTGCCTGATGGGTCTTGGCGTTGGCCTAGTATATCGCTTGAGCTATTGCTTGTCTTGCCTTCAGTACAAGGGGTTCAGCTGTGCCTTGCTAGGGAGGATAGTGTGGTTTGGCTCCCGAGTAGGTATGAGGGTTTCTCTGTCTCTAGTGCATGGGAGGCTATTAGGCCTCGTTCTTCGGTTGTTCCTTGGTTTCGCTCGTTATGGTTTGCGGGTAATATCCCTAAACACTCATTTATTGCTTGGCTTGGGGTGCGAGATAGGCTCTATACGAGGGACCGGTTGCACAGGTGGGGATTCTTCGAGCCCCACTCATTACCTTTTGTGCTTTGGTGCCCCTGAGTCTCATGATCATCTGTTTCTTGAGTGCCCTTTTAGCTAGGTTGTGTGGGGTGGGATCTTGAGTTGGGGTGCCTGTCCTCATAGGATTGCCTCATGGGATACTGAGCTGTCTTGGATCTGCCAGTTTAATGGTGGCAAGCGTCGTAGCCGCCGAGTGTGGAGGGTTACCTGGTGTGCCTTGATCTATCACATTTGGAGGGAGAGGAATCTGCATCTCCATGGTTCGAGTCCTCGCTCTCCTCAGACTGTTTTACATGTAGTTTAGGTTGATATTTTCGGTCATTGTGCCTCCTAGCTAGGGTGTGTGTCTTCTCCCCTACCTGGGGCGTCTCCCTGGAGCATGTGTGTGTCGTCTCCCCGAACCATGGAGACGCAGATTCCTGAACCACATGTAAGAAAGAAAAACCATGGCCCATCAAGCAAACATGGTCCAGGGAGATGCCCCAAGCAGGGGAGAAGGCACACCACTTAGTCAGGAAGCACAACGACCAAACATATCAGCCTGAACCACATGTAAAACAGTCTAAGCAGTGTAAGGACCCGAACCATGGAGACGAATATTCCTCTCTCTCCAAATGTGATAGATCCAAGCACACCAGGCAACCCTCCACACTCGGCAGCTACGACGCTTGCCACCACTAAATTGGCAGATCCAAGACAACTCAGTATCCCATGAGGCAATCCTATGTGAACAGGCACCCCAACTCAAGATCCCACCACACACAACCTAACTGAAAAGGCACTCAAAAAATAGATGATCTCAGGACTCAGGGGCACCAAAGCACAATAGACAATCAGTGGGGCTCGAAGAATCTCACCTGTGCAAGCGATCCCTCGTATAGAGCCTATCCCGCACCCCAAGCCAAGCAACAAAGGAGTGTTTAGGGATATTACCCCCAAACAATAACAAGCAAAACCAAGGATAACCGAAGAACGAGGCATGATAGCCTCCCACGCACTAGAGACAGAGAAAACCCCAAACCTACTCGGGAGTCAAACCACACTATCCTCCCTAGCAAGGCACAGCCAAACCTCTTGCAGCGAAGGTAA ATGTTGATGTCTGGTTCGTTGTGGGTTGCCTGGGTTGAGGCTTATATCTTGTGTGCGCGGTCTCTGTGGACTGTTTGCCCCTCTTCGCGGTGGTCTTGGTGTTGGAGAGCGATTCTTAGTCTTCGGGATCAATTTTGGTCACTCATTCGTTTCCGCATTGGTGATGGAAGGAGATGTCTTACATGGGTGGATCCGTGGTTGCCTAAGGGTTCTATTATTCCTCGTTTTTCTGAGAGGGTTATTTATGATGTTGCTAGCTCGTTGTATGCTCCTGTGGCTGATTTCCTCTTGCCTGATGGGTCTTGGCGTTGGCCTAGTATATCGCTTGAGCTATTGCTTGTCTTGCCTTCAGTACAAGGGGTTCAGCTGTGCCTTGCTAGGGAGGATAGTGTGGTTTGGCTCCCGAGTAGAGAAAACCCCAAACCTACTCGGGAGTCAAACCACACTATCCTCCCTAGCAAGGCACAGCCAAACCTCTTGCAGCGAAGGTAA ATGTTGATGTCTGGTTCGTTGTGGGTTGCCTGGGTTGAGGCTTATATCTTGTGTGCGCGGTCTCTGTGGACTGTTTGCCCCTCTTCGCGGTGGTCTTGGTGTTGGAGAGCGATTCTTAGTCTTCGGGATCAATTTTGGTCACTCATTCGTTTCCGCATTGGTGATGGAAGGAGATGTCTTACATGGGTGGATCCGTGGTTGCCTAAGGGTTCTATTATTCCTCGTTTTTCTGAGAGGGTTATTTATGATGTTGCTAGCTCGTTGTATGCTCCTGTGGCTGATTTCCTCTTGCCTGATGGGTCTTGGCGTTGGCCTAGTATATCGCTTGAGCTATTGCTTGTCTTGCCTTCAGTACAAGGGGTTCAGCTGTGCCTTGCTAGGGAGGATAGTGTGGTTTGGCTCCCGAGTAGAGAAAACCCCAAACCTACTCGGGAGTCAAACCACACTATCCTCCCTAGCAAGGCACAGCCAAACCTCTTGCAGCGAAGGTAA MLMSGSLWVAWVEAYILCARSLWTVCPSSRWSWCWRAILSLRDQFWSLIRFRIGDGRRCLTWVDPWLPKGSIIPRFSERVIYDVASSLYAPVADFLLPDGSWRWPSISLELLLVLPSVQGVQLCLAREDSVVWLPSRENPKPTRESNHTILPSKAQPNLLQRR Homology
BLAST of Lcy11g014050 vs. ExPASy TrEMBL
Match: A0A5A7V3Z0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00690 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 9.7e-33 Identity = 70/134 (52.24%), Postives = 90/134 (67.16%), Query Frame = 0
BLAST of Lcy11g014050 vs. ExPASy TrEMBL
Match: A0A5A7T440 (Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1480G00070 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 4.8e-32 Identity = 67/135 (49.63%), Postives = 91/135 (67.41%), Query Frame = 0
BLAST of Lcy11g014050 vs. ExPASy TrEMBL
Match: A0A5D3BDZ6 (Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00360 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31 Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = 0
BLAST of Lcy11g014050 vs. ExPASy TrEMBL
Match: A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of Lcy11g014050 vs. ExPASy TrEMBL
Match: A0A5A7TKU4 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00080 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 9.4e-28 Identity = 65/147 (44.22%), Postives = 86/147 (58.50%), Query Frame = 0
BLAST of Lcy11g014050 vs. NCBI nr
Match: KAA0062318.1 (uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 2.0e-32 Identity = 70/134 (52.24%), Postives = 90/134 (67.16%), Query Frame = 0
BLAST of Lcy11g014050 vs. NCBI nr
Match: KAA0036886.1 (zf-RVT domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 147.5 bits (371), Expect = 9.9e-32 Identity = 67/135 (49.63%), Postives = 91/135 (67.41%), Query Frame = 0
BLAST of Lcy11g014050 vs. NCBI nr
Match: TYJ96685.1 (zf-RVT domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 146.4 bits (368), Expect = 2.2e-31 Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = 0
BLAST of Lcy11g014050 vs. NCBI nr
Match: KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 139.0 bits (349), Expect = 3.5e-29 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of Lcy11g014050 vs. NCBI nr
Match: KAA0042317.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK15441.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 133.3 bits (334), Expect = 1.9e-27 Identity = 65/147 (44.22%), Postives = 86/147 (58.50%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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