Lcy11g013940 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGTAACCTGGTGTCGACCTATTTGGCAAACAGAGAAAGTGGTCGTACAAGATGCTTTCGAGACTTATTTTTCATCCTTATTCTCTTCGGGGAATCCTGTTCAGGGGGATTTGGATGTAGTTCTTAATTGTGTCCCTCTGAAAAGTTACGGAAGCGATGTACCAGATGCTAATGGCACCCTTTTCGAGGGAGGAAGTGTATTATGCAATTAAAAGCTTTCATCCGACGAAGGCCCTGGGTCCAGATGGCTTTCCTGCAATTTTTTATCAGAAATATTGGACAATAGTGGGGGATACCACGGTAGCGAATTGTTTGGCTATTTTGAACTCAGGCGAATCGATTCGAGATTGGAATCATACAAATATTGTGCTAATCCCAAAGCTTCGTCAAGCAAGGTTAGTATCTGACTACAGACCTATTAGTTTGTGTAACGTCTCGTATAAAATTGTCACTAAAGTCATAGCCAATAGACTAAAGCATGTATTGGGTGAGATTATAGACGAATGTCAGTCTGCTTTTATTCCTGGTAGATCTATATCGGATAATATGATTTTGGCTCATGAAACTTTACACTATCTCCAAAATAGACGTAAAGGAAAAGTTGGGTATGCTGCCTTAAAACTTGATATGAGTAAAGCTTATGATAGGGTGGAGTGGTCTTATCTGAGCCAAATTATGGCTAAACTGGGTTTTAATGAGGACTGGATTAAATTGATTATGAAGTGTGTCTCAATGACCACGTTTTCTATTCTTATGAATGGAGAATCTTTTGGTTTCATTCAACCATCCAGGGGATTAAGGCAGGGTGACCCCCTTTCTCCTTATTTATTTCTGATCTGCACGGAAGGACTCTCTGCTTTGTTGGTTTCTGCAAGGAATAATTATATGGCAGGCGTTTCTATTGCACGGGCTTGTCCCAAAGTATCTCATTTATTTTTCGCAGATGATAGCCTAGCCTTTCTCAAAGTAGCGGCTGCTCATTTTGGTCATTTTAAGACTGTTTTACAAACTTACGAGATGACGTCAGGTCAGTGTGTTAATGCCCAGAAGTCAACAATGTTTTTCTCAAAAAATGTTCCGGTTGACTCTAGGCAGTATCTGTCTAATATATTGTCTATGGATGCATCGGAGTCTGTGGGGAAGTACCTCGGTCTTCCGTCTACTTTCCACAGAGGAAAAACACGAGATTTCCAATTTTTATTAGATAAGGTGTGGTCTTTGTTGCAAAGGTGGAAGAGGCAACTTTTTTCTCAGGGAGGAAGGGAGGTGTTGATTAAAGCCATCATTCAGGCTATTCCTACATTTGCGATGGGTTGTTTTAGAATTCCCAAGGGTATCTTATCAAAAATTTCGGCTCTTTGTGCCAAATTCTGGTGGGGCTCCCAAGGGGATAAGAGGAAGGTGCATTGGCGACGTTGGCAGGATCTCTGTAAACCAAAAGAGATTGGTGGGTTGAATTTTCGTGATCTGGTTAACTTTAACCAGGCTATGCTTGCGAAACAGGTCTGGAGGGTTTTGACTAAGCCACACCTCACAGTATCCAAAGTTTTAAGGGGGAGATATTTTCCGCACTCATCGGTCTTGGATGCGCCCCTAAAGTCTTCTTCTTCTTTCTTCTGGAAGGGCTTTGTGTGGGGGAAGGATTTGTTAAAAGCTGGTATCCGGAAAGATCTTGGAAATGGGCTTTCCATTAATTTATTTACAGACCCATGGATTCCCCATCCAAGTACCTTTAGAGCGATTTCTCCGTCCAATGATTCCGTGGTAAATGTTGTTGTGGCAGATTTTATTACTCCATCATATCAGTGGGATGTTGTGAAGCTTAACCAGTGTCTGGTAAAGGAAGATGTTGAGTTGATCCTTAGCCTTCCAATTAGTAGTTCTGCCTCTGATAGATGGGTATGGCATTATGATTGTAGGGGTGAGTACTCTGTTAAGAGTGGATACAAGCTCAGTATGATGATTGATCAACAGGCAACCTTATCTGACACTTTGAGAGAGATGAGGTGGTGGAAGAAAATCTGGAAATTGAGTGTGCCTAGCAAGGTCAAGATTTTTGTGTGGCGGTCATACAACAATTCAATTCCAACAATGGTCAATCTTCGCAATCATCATGTTCCGGTCGAAGGTATCTGCCCTATCTGTAAGGAGGAGATGGAGACTTCGGATCATGCTCTCTTTCAGTGTTCGAGAGCTCTTGCGGTTTGGGGAATAATATCTCCAATTATGATGGCAGACTGTAGTGAATATTTTGATATTAAGGACCGATGGTTGCGGCTAGCAGAGGACTCGAGTGTATGTCTAGAGCGTATTTGTGTTGGGGGCTTGGGCTATCTGGAATGACAGAAATAGCCAGGTTCATAACATCCCCGTTCCAACTGTAGAGATGCGCTGTGAATGGATTATCGAATACTTGAACGAGTATTGGCAGGCAAATCCGAAAGGTTCTGTAAATATTAAGAATGTGGAGGATGTGCACCATATTATTTCAAATGGAGAAGATTATATCTTGAATTCTGATGCAGCGTTTCTGGGTACTATGCGAGCTAGTGGGATTGGATTAGTTTTGCGAGATAAATTCGGTCATCTGAAGGCCGCACAATCTTCACAATCTCATGTTTATACTTCTCCGTTAGGGGCGGAAGCTATTGTTGTTCTCCATGGTCTTTATATGGCTAAAACGTTGGGGATAAATCGTGTAACGATCTTGTCCGATTCTCTGAAGTTAATCAAATTAGTCAATGCGGAGATTCAATGTGAGTCTTGTATATCGACTACTATCTGGGACATCAGGGAGATTCAAAAATCTTTTGATAAGGTGAGTTTTAAGTTCGTTGGTCGTCAGTTTAATGGCATTGCTCATAAATTGGCTCGGGATGGGTTAGAGTCCTTACCTTTCTTCTTGTCAGAAAACTATCCTTCGTGGATGATCAAGTTGTCGTGTAAAGAGCGATGTATGTTTGCTTCCCTTAGGGGATGTCATGATTCTTAA ATGCAAGTAACCTGGTGTCGACCTATTTGGCAAACAGAGAAAGTGGTCGTACAAGATGCTTTCGAGACTTATTTTTCATCCTTATTCTCTTCGGGGAATCCTGTTCAGGGGGATTTGGATGTAGTTCTTAATTGTGTCCCTCTGAAAAGTTACGGAAGCGATAATGTGGAGGATGTGCACCATATTATTTCAAATGGAGAAGATTATATCTTGAATTCTGATGCAGCGTTTCTGGGTACTATGCGAGCTAGTGGGATTGGATTAGTTTTGCGAGATAAATTCGGTCATCTGAAGGCCGCACAATCTTCACAATCTCATGTTTATACTTCTCCGTTAGGGGCGGAAGCTATTGTTGTTCTCCATGGTCTTTATATGGCTAAAACGTTGGGGATAAATCGTGTAACGATCTTGTCCGATTCTCTGAAGTTAATCAAATTAGTCAATGCGGAGATTCAATGTGAGTCTTGTATATCGACTACTATCTGGGACATCAGGGAGATTCAAAAATCTTTTGATAAGGTGAGTTTTAAGTTCGTTGGTCGTCAGTTTAATGGCATTGCTCATAAATTGGCTCGGGATGGGTTAGAGTCCTTACCTTTCTTCTTGTCAGAAAACTATCCTTCGTGGATGATCAAGTTGTCGTGTAAAGAGCGATGTATGTTTGCTTCCCTTAGGGGATGTCATGATTCTTAA ATGCAAGTAACCTGGTGTCGACCTATTTGGCAAACAGAGAAAGTGGTCGTACAAGATGCTTTCGAGACTTATTTTTCATCCTTATTCTCTTCGGGGAATCCTGTTCAGGGGGATTTGGATGTAGTTCTTAATTGTGTCCCTCTGAAAAGTTACGGAAGCGATAATGTGGAGGATGTGCACCATATTATTTCAAATGGAGAAGATTATATCTTGAATTCTGATGCAGCGTTTCTGGGTACTATGCGAGCTAGTGGGATTGGATTAGTTTTGCGAGATAAATTCGGTCATCTGAAGGCCGCACAATCTTCACAATCTCATGTTTATACTTCTCCGTTAGGGGCGGAAGCTATTGTTGTTCTCCATGGTCTTTATATGGCTAAAACGTTGGGGATAAATCGTGTAACGATCTTGTCCGATTCTCTGAAGTTAATCAAATTAGTCAATGCGGAGATTCAATGTGAGTCTTGTATATCGACTACTATCTGGGACATCAGGGAGATTCAAAAATCTTTTGATAAGGTGAGTTTTAAGTTCGTTGGTCGTCAGTTTAATGGCATTGCTCATAAATTGGCTCGGGATGGGTTAGAGTCCTTACCTTTCTTCTTGTCAGAAAACTATCCTTCGTGGATGATCAAGTTGTCGTGTAAAGAGCGATGTATGTTTGCTTCCCTTAGGGGATGTCATGATTCTTAA MQVTWCRPIWQTEKVVVQDAFETYFSSLFSSGNPVQGDLDVVLNCVPLKSYGSDNVEDVHHIISNGEDYILNSDAAFLGTMRASGIGLVLRDKFGHLKAAQSSQSHVYTSPLGAEAIVVLHGLYMAKTLGINRVTILSDSLKLIKLVNAEIQCESCISTTIWDIREIQKSFDKVSFKFVGRQFNGIAHKLARDGLESLPFFLSENYPSWMIKLSCKERCMFASLRGCHDS Homology
BLAST of Lcy11g013940 vs. ExPASy TrEMBL
Match: A0A2P6QJ46 (Putative ribonuclease H-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0066251 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.4e-13 Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 0
BLAST of Lcy11g013940 vs. ExPASy TrEMBL
Match: A0A7J9CHG1 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_004472 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.3e-10 Identity = 52/159 (32.70%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Lcy11g013940 vs. ExPASy TrEMBL
Match: A0A7J8YQL8 (RNase H domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_027351 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.3e-10 Identity = 48/150 (32.00%), Postives = 80/150 (53.33%), Query Frame = 0
BLAST of Lcy11g013940 vs. ExPASy TrEMBL
Match: A0A7J8SJ69 (Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_003881 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.3e-10 Identity = 52/159 (32.70%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Lcy11g013940 vs. ExPASy TrEMBL
Match: A0A7J8VH54 (Uncharacterized protein OS=Gossypium klotzschianum OX=34286 GN=Goklo_006016 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.3e-10 Identity = 52/159 (32.70%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Lcy11g013940 vs. NCBI nr
Match: PRQ34202.1 (putative ribonuclease H-like domain-containing protein [Rosa chinensis]) HSP 1 Score: 85.9 bits (211), Expect = 5.0e-13 Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 0
BLAST of Lcy11g013940 vs. NCBI nr
Match: XP_042962749.1 (uncharacterized protein LOC122297028 [Carya illinoinensis]) HSP 1 Score: 79.3 bits (194), Expect = 4.7e-11 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of Lcy11g013940 vs. NCBI nr
Match: XP_041011337.1 (uncharacterized protein LOC121255120 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 79.0 bits (193), Expect = 6.1e-11 Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = 0
BLAST of Lcy11g013940 vs. NCBI nr
Match: XP_024157591.1 (uncharacterized protein LOC112165325 [Rosa chinensis]) HSP 1 Score: 78.2 bits (191), Expect = 1.0e-10 Identity = 47/141 (33.33%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of Lcy11g013940 vs. NCBI nr
Match: KAG7547885.1 (Reverse transcriptase domain [Arabidopsis suecica]) HSP 1 Score: 78.2 bits (191), Expect = 1.0e-10 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Lcy11g013940 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07 Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = 0
BLAST of Lcy11g013940 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 4.4e-07 Identity = 41/140 (29.29%), Postives = 66/140 (47.14%), Query Frame = 0
BLAST of Lcy11g013940 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06 Identity = 42/148 (28.38%), Postives = 70/148 (47.30%), Query Frame = 0
BLAST of Lcy11g013940 vs. TAIR 10
Match: AT2G13980.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 6.3e-06 Identity = 44/147 (29.93%), Postives = 64/147 (43.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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