Lcy11g013680 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g013680
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	MYB transcription factor
Location	Chr11: 22036433 .. 22037351 (-)
RNA-Seq Expression	Lcy11g013680
Synteny	Lcy11g013680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAAACCAGAAGCGAAAGTGGACGCTGGAGGAAGAAGATGCACTTTTTGCCGGTGTAAAGATGCACGGTCTCGGAAAGTGGAAGAACATTCTCAAAGATCTTGAAGTCGCTCTGTTTCTCACTCAGCGCTCGAACGTTGACCTTAAGGTCCCTATTTAACTGCTTATTGTTTTCAATTATCTTTCTGGGTGTTTTTTTTCGCATTTGGTTTACCTTTTTGGATGTTATTTAGGGTTTTAATCATGAACTTGAGGTGGAACTAATATATTGCGGGTTTTTTTTTTTTGAAGATTAGCTTTGGTTTGTTTAGAATCGAATTCTATTGGCTTGGTTCTCTTGCAAATCATGCAGCTAAACCTACTTGGTTGAGTGGTTTAAGATAGAATAATTTTGTTTTGTTCTTAAATTTTCTAACAAATATAAATCTTTCCCCGATGCTCTCCATTGGGTTTCTACATTAATTTGTTGACTAAAATTTACTCTATGATTTTCACGAAGTTTTGCCTTTGATCAACTAAGTAATATAAGAAGAGAGTCCTGAAAGTGGAATTAGAGGGAAGAAATAGTTTGATTTGGTATTTAAATATTAAATACTATTAATATGATGCACGTTCGTTCCTTTTAGATTGCTTCTATGGAAGCTTCAACTTGGTTGATTGACACTTTTTGCGGTAAAGGAGTGAAAATGAGTTCATAGGATAGGGTTGGCTCGTGAGGGGAGATTCATGGCAATGATCGTATCATAAGACTCAATGTTATGTCTGAATAACGCTATTCCCTTGCTTATATACAGGACAAATGGCGTAATTTGAGCCTTTCACAACGCCAAAAAAAGAAGTCCAGAGCTTCTAAAGCAGAAGCTATCGTCAACCAAAGCTCTGCCCCTACTAGGTTTGATGCAGCTGTTGATATATAG

mRNA sequence

ATGCGAAACCAGAAGCGAAAGTGGACGCTGGAGGAAGAAGATGCACTTTTTGCCGGTGTAAAGATGCACGGTCTCGGAAAGTGGAAGAACATTCTCAAAGATCTTGAAGTCGCTCTGTTTCTCACTCAGCGCTCGAACGTTGACCTTAAGGACAAATGGCGTAATTTGAGCCTTTCACAACGCCAAAAAAAGAAGTCCAGAGCTTCTAAAGCAGAAGCTATCGTCAACCAAAGCTCTGCCCCTACTAGGTTTGATGCAGCTGTTGATATATAG

Coding sequence (CDS)

ATGCGAAACCAGAAGCGAAAGTGGACGCTGGAGGAAGAAGATGCACTTTTTGCCGGTGTAAAGATGCACGGTCTCGGAAAGTGGAAGAACATTCTCAAAGATCTTGAAGTCGCTCTGTTTCTCACTCAGCGCTCGAACGTTGACCTTAAGGACAAATGGCGTAATTTGAGCCTTTCACAACGCCAAAAAAAGAAGTCCAGAGCTTCTAAAGCAGAAGCTATCGTCAACCAAAGCTCTGCCCCTACTAGGTTTGATGCAGCTGTTGATATATAG

Protein sequence

MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKKKSRASKAEAIVNQSSAPTRFDAAVDI

Homology

[Close]

BLAST of Lcy11g013680 vs. ExPASy Swiss-Prot
Match: F4I7L1 (Telomere repeat-binding factor 4 OS=Arabidopsis thaliana OX=3702 GN=At1g17520 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-17
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLS- 60
          M NQK KWT EEE+AL AGV+ HG GKWKNIL+D E+A  L+ RSN+DLKDKWRNLS++ 
Sbjct: 1  MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60

Query: 61 --QRQKKKSRASKAEA 74
            Q  K K R  K +A
Sbjct: 61 GIQGSKDKIRTPKIKA 76

[Close]

BLAST of Lcy11g013680 vs. ExPASy Swiss-Prot
Match: F4IEY4 (Telomere repeat-binding factor 5 OS=Arabidopsis thaliana OX=3702 GN=At1g72740 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-16
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK KWT EEE+AL AG++ HG GKWKNIL+D E A  L  RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60

Query: 61 -SQRQKKKSRASKAE 73
           +Q    K+R +K +
Sbjct: 61 GTQSLTNKARPAKVK 75

[Close]

BLAST of Lcy11g013680 vs. ExPASy Swiss-Prot
Match: Q8W119 (Single myb histone 4 OS=Zea mays OX=4577 GN=SMH4 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.1e-14
Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 5  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKK 64
          K+KWT EEEDAL AGV+ HG GKW+ I KD E +  L+ RSN+DLKDKWRNLS S     
Sbjct: 5  KQKWTSEEEDALRAGVRKHGAGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSASGLG 64

Query: 65 KSRASKAEAIVNQSSAPT 83
           S+  +   I   SS+P+
Sbjct: 65 SSKL-RVPKITGPSSSPS 81

[Close]

BLAST of Lcy11g013680 vs. ExPASy Swiss-Prot
Match: Q6WLH4 (Single myb histone 3 OS=Zea mays OX=4577 GN=SMH3 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 5  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKK 64
          K+KWT EEEDAL  GV+ HG GKW+ I KD + +  L+ RSN+DLKDKWRNLS S     
Sbjct: 5  KQKWTSEEEDALRRGVRKHGAGKWRTIQKDPQFSPILSSRSNIDLKDKWRNLSFSASGLG 64

Query: 65 KSRASKAEAIVNQSSAPTRFDAAV 89
           S+  +   I   SS+P+    A+
Sbjct: 65 SSKV-RVPKITGSSSSPSSSSQAL 87

[Close]

BLAST of Lcy11g013680 vs. ExPASy Swiss-Prot
Match: Q9FJW5 (Telomere repeat-binding factor 2 OS=Arabidopsis thaliana OX=3702 GN=TRB2 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-13
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 5  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKK 64
          K+KWT EEE AL AGV  HG GKW+ IL D E +L L  RSNVDLKDKWRN+S++     
Sbjct: 5  KQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTALWGS 64

Query: 65 KSRASKA 72
          + +A  A
Sbjct: 65 RKKAKLA 71

[Close]

BLAST of Lcy11g013680 vs. ExPASy TrEMBL
Match: A0A6J1KEM4 (MYB transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111493151 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.2e-22
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKQKWTQEEEEALLAGVQKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD 90
           SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Sbjct: 61 ASQGSKEKSRTPKAKAIVAASISNNQNSALTKFNASAD 98

[Close]

BLAST of Lcy11g013680 vs. ExPASy TrEMBL
Match: A0A6J1GCH5 (MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111452883 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.2e-22
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKQKWTQEEEEALLAGVQKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD 90
           SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Sbjct: 61 ASQGSKEKSRTPKAKAIVAASVSNNQNSALTKFNASAD 98

[Close]

BLAST of Lcy11g013680 vs. ExPASy TrEMBL
Match: A0A6J1DGG1 (MYB transcription factor OS=Momordica charantia OX=3673 GN=LOC111020276 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.2e-22
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK+KWT EEE+AL AGV  HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKQKWTSEEEEALLAGVAKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD 90
           SQ  K+KSRA KA+AIV      NQ+S P R +A+ D
Sbjct: 61 ASQGSKEKSRAPKAKAIVAASLSNNQNSVPARLNASAD 98

[Close]

BLAST of Lcy11g013680 vs. ExPASy TrEMBL
Match: A0A6J1J017 (MYB transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111479985 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21
Identity = 63/97 (64.95%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK KWT EEEDAL AGV  HG GKWKNILKD E A  LT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKLKWTSEEEDALLAGVNKHGPGKWKNILKDPEFAPSLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV-----NQSSAPTRFDAAVD 90
           SQ  K+KSRA KA+AIV     +Q+SAP +F+A+ D
Sbjct: 61 ASQGSKEKSRAPKAKAIVAAISNHQNSAPAKFNASAD 97

[Close]

BLAST of Lcy11g013680 vs. ExPASy TrEMBL
Match: A0A6J1GWF6 (MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111458043 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.7e-21
Identity = 62/97 (63.92%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK KWT EEE+AL AGV  HG GKWKNILKD E A  LT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKLKWTSEEEEALLAGVNKHGPGKWKNILKDPEFAPSLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV-----NQSSAPTRFDAAVD 90
           SQ  K+KSRA KA+AIV     +Q+SAP +F+A+ D
Sbjct: 61 ASQGSKEKSRAPKAKAIVAAISNHQNSAPAKFNASAD 97

[Close]

BLAST of Lcy11g013680 vs. NCBI nr
Match: KAG7036424.1 (Telomere repeat-binding factor 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKQKWTQEEEEALLAGVQKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD 90
           SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Sbjct: 61 ASQGSKEKSRTPKAKAIVAASVSNNQNSALTKFNASAD 98

[Close]

BLAST of Lcy11g013680 vs. NCBI nr
Match: XP_023525823.1 (telomere repeat-binding factor 4-like [Cucurbita pepo subsp. pepo] >XP_023525824.1 telomere repeat-binding factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKQKWTQEEEEALLAGVQKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD 90
           SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Sbjct: 61 ASQGSKEKSRTPKAKAIVAASVSNNQNSALTKFNASAD 98

[Close]

BLAST of Lcy11g013680 vs. NCBI nr
Match: XP_022152584.1 (telomere repeat-binding factor 4-like [Momordica charantia])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK+KWT EEE+AL AGV  HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKQKWTSEEEEALLAGVAKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD 90
           SQ  K+KSRA KA+AIV      NQ+S P R +A+ D
Sbjct: 61 ASQGSKEKSRAPKAKAIVAASLSNNQNSVPARLNASAD 98

[Close]

BLAST of Lcy11g013680 vs. NCBI nr
Match: KAG6606708.1 (Telomere repeat-binding factor 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKQKWTQEEEEALLAGVQKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD 90
           SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Sbjct: 61 ASQGSKEKSRTPKAKAIVAASVSNNQNSALTKFNASAD 98

[Close]

BLAST of Lcy11g013680 vs. NCBI nr
Match: XP_022998553.1 (telomere repeat-binding factor 4-like [Cucurbita maxima] >XP_022998554.1 telomere repeat-binding factor 4-like [Cucurbita maxima])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK+KWT EEE+AL AGV+ HG GKWKNILKD E A FLT RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKQKWTQEEEEALLAGVQKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVST 60

Query: 61 -SQRQKKKSRASKAEAIV------NQSSAPTRFDAAVD 90
           SQ  K+KSR  KA+AIV      NQ+SA T+F+A+ D
Sbjct: 61 ASQGSKEKSRTPKAKAIVAASISNNQNSALTKFNASAD 98

[Close]

BLAST of Lcy11g013680 vs. TAIR 10
Match: AT1G17520.1 (Homeodomain-like/winged-helix DNA-binding family protein )

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-18
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLS- 60
          M NQK KWT EEE+AL AGV+ HG GKWKNIL+D E+A  L+ RSN+DLKDKWRNLS++ 
Sbjct: 1  MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60

Query: 61 --QRQKKKSRASKAEA 74
            Q  K K R  K +A
Sbjct: 61 GIQGSKDKIRTPKIKA 76

[Close]

BLAST of Lcy11g013680 vs. TAIR 10
Match: AT1G72740.1 (Homeodomain-like/winged-helix DNA-binding family protein )

HSP 1 Score: 85.1 bits (209), Expect = 3.1e-17
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK KWT EEE+AL AG++ HG GKWKNIL+D E A  L  RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60

Query: 61 -SQRQKKKSRASKAE 73
           +Q    K+R +K +
Sbjct: 61 GTQSLTNKARPAKVK 75

[Close]

BLAST of Lcy11g013680 vs. TAIR 10
Match: AT1G72740.2 (Homeodomain-like/winged-helix DNA-binding family protein )

HSP 1 Score: 85.1 bits (209), Expect = 3.1e-17
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 1  MRNQKRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSL-- 60
          M NQK KWT EEE+AL AG++ HG GKWKNIL+D E A  L  RSN+DLKDKWRNLS+  
Sbjct: 1  MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60

Query: 61 -SQRQKKKSRASKAE 73
           +Q    K+R +K +
Sbjct: 61 GTQSLTNKARPAKVK 75

[Close]

BLAST of Lcy11g013680 vs. TAIR 10
Match: AT5G67580.1 (Homeodomain-like/winged-helix DNA-binding family protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-14
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 5  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKK 64
          K+KWT EEE AL AGV  HG GKW+ IL D E +L L  RSNVDLKDKWRN+S++     
Sbjct: 5  KQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTALWGS 64

Query: 65 KSRASKA 72
          + +A  A
Sbjct: 65 RKKAKLA 71

[Close]

BLAST of Lcy11g013680 vs. TAIR 10
Match: AT5G67580.2 (Homeodomain-like/winged-helix DNA-binding family protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-14
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 5  KRKWTLEEEDALFAGVKMHGLGKWKNILKDLEVALFLTQRSNVDLKDKWRNLSLSQRQKK 64
          K+KWT EEE AL AGV  HG GKW+ IL D E +L L  RSNVDLKDKWRN+S++     
Sbjct: 5  KQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTALWGS 64

Query: 65 KSRASKA 72
          + +A  A
Sbjct: 65 RKKAKLA 71

The following BLAST results are available for this feature:

BLAST of Lcy11g013680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I7L1	2.3e-17	61.84	Telomere repeat-binding factor 4 OS=Arabidopsis thaliana OX=3702 GN=At1g17520 PE...	[more]
F4IEY4	4.4e-16	58.67	Telomere repeat-binding factor 5 OS=Arabidopsis thaliana OX=3702 GN=At1g72740 PE...	[more]
Q8W119	3.1e-14	53.85	Single myb histone 4 OS=Zea mays OX=4577 GN=SMH4 PE=2 SV=1	[more]
Q6WLH4	1.2e-13	48.81	Single myb histone 3 OS=Zea mays OX=4577 GN=SMH3 PE=2 SV=1	[more]
Q9FJW5	2.0e-13	56.72	Telomere repeat-binding factor 2 OS=Arabidopsis thaliana OX=3702 GN=TRB2 PE=1 SV...	[more]

BLAST of Lcy11g013680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEM4	7.2e-22	64.29	MYB transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111493151 PE=4 SV=1	[more]
A0A6J1GCH5	7.2e-22	64.29	MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111452883 PE=4 SV=1	[more]
A0A6J1DGG1	7.2e-22	64.29	MYB transcription factor OS=Momordica charantia OX=3673 GN=LOC111020276 PE=4 SV=...	[more]
A0A6J1J017	1.6e-21	64.95	MYB transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111479985 PE=4 SV=1	[more]
A0A6J1GWF6	4.7e-21	63.92	MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111458043 PE=4 SV=1	[more]

BLAST of Lcy11g013680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036424.1	1.5e-21	64.29	Telomere repeat-binding factor 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023525823.1	1.5e-21	64.29	telomere repeat-binding factor 4-like [Cucurbita pepo subsp. pepo] >XP_023525824...	[more]
XP_022152584.1	1.5e-21	64.29	telomere repeat-binding factor 4-like [Momordica charantia]	[more]
KAG6606708.1	1.5e-21	64.29	Telomere repeat-binding factor 4, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022998553.1	1.5e-21	64.29	telomere repeat-binding factor 4-like [Cucurbita maxima] >XP_022998554.1 telomer...	[more]

BLAST of Lcy11g013680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17520.1	1.6e-18	61.84	Homeodomain-like/winged-helix DNA-binding family protein	[more]
AT1G72740.1	3.1e-17	58.67	Homeodomain-like/winged-helix DNA-binding family protein	[more]
AT1G72740.2	3.1e-17	58.67	Homeodomain-like/winged-helix DNA-binding family protein	[more]
AT5G67580.1	1.4e-14	56.72	Homeodomain-like/winged-helix DNA-binding family protein	[more]
AT5G67580.2	1.4e-14	56.72	Homeodomain-like/winged-helix DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 4..59 e-value: 1.7E-7 score: 40.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..57 score: 8.617808
None	No IPR available	GENE3D	1.10.246.220		coord: 8..83 e-value: 4.1E-20 score: 73.5
None	No IPR available	PANTHER	PTHR46267:SF3	TELOMERE REPEAT-BINDING FACTOR 4-RELATED	coord: 1..77
None	No IPR available	CDD	cd11660	SANT_TRF	coord: 6..56 e-value: 3.81459E-19 score: 71.4443
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 5..56 e-value: 1.3E-10 score: 41.3
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..61 score: 13.999525
IPR044597	Single myb histone 1-6	PANTHER	PTHR46267	SINGLE MYB HISTONE 4	coord: 1..77
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g013680.1	Lcy11g013680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003691	double-stranded telomeric DNA binding