Lcy11g013080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g013080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
Location	Chr11: 19847133 .. 19862133 (-)
RNA-Seq Expression	Lcy11g013080
Synteny	Lcy11g013080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTTCTTACCCAAACACAACCTTAGAAGCAAGCCTGAACTCTCTGGATTCTCCTGAAACTTCAACAAGGAGTTTCTAAGGAATAACAACTACTCTAAAACACTTAAATCAAGATCCAAAGGGATTAAAGAGCATTTAAACTTACCTATCTTTTCCAAAAGCACCCAAACGCTTGCTAGACTTTACCGAACAACACCTAAACAACCTTAAAGCTTGCTGCCCAGTGACTGAATGAGTTCAAGATCACCAATCCGAACCTCCTAGCCTATGGGCATTCAGTCTCAAGGTTGTTCGGGCTATGGGTATTCGTCGAAAACCAATTTCGAGTCCAAAAGCTCGCTATTTGGCTTTCAAAGAACCTTAATCCTGCAAATTAGAAGCCGAAAGGAATGGGTAAACAATATTCGAACTCAAACAAGCGTGGGTCATGATCTAGGACAACTTTGAGGACTAAACTACTTGGGTACACGCTGAAACTTGAAGGAAATCGAGTGGGTCAAAGCTAAGCTTGCCGAAAACGCCACAACACTTCGATGGAGGGCTGGAAATCAGGCCAAACACGTGAATCGCTGCTGGTCGCGGGTTCAAGGTTGCTGGAATCACGAACCTGCTCCAGAATCGCGCAGGTTCCTTGATGCCAACGAAAAAGAGAGACGAGGAAGAGATATTTACGTCGTAGAGCTTAACGAGAACGAACTCGTGGGTCTCACAAATTGCTACACGTGCGAGGAAGGAGGGAAAATCACGCCGCTATCGCAGATGTGCCGTCGGCTTGCTGCTCGAAGAAGGAGAAACGCGAGAGAGAGGAATCGCGAGGCTTGGGTCTTCTTGCTGCGCGCCGGAGAGATGCGATCGGAGGAAGAATGAGCCTTTGCGTGGGTGCTGGCCGGCGGGATGAAGGATCGAGAGGGTGAGATATGCTACCGGTTCAAGAAAATCGAGGGGGGTGTTCACCCGACTATAAGAAGGGAAGAAAGGGAAAGAGATAGATTTAGGGCTTCCTTGGTTTATTTTCTTTTTAGAAGATGCTCTAGCAATATTATTGATCATGCAAAACTCTCGCAGTCTTATTAGCGGATTCCTCTCGGAACTCCGGATTTTTTAGAATATGTTTCAACTCCAATGAAGCACTACCGATCAAGCACTAGCACTAGGCAACTGGCTATCCCTAGCTAAGTCACTGGCGTTCCCCAATACACAATGATCTAGTGTGATTAATTGCCACACACTTCCCAAATCATCCCTGAAACTAGGAAGTGGTATTCATACCGGCTAGCCAGGCGGGCGTAAAATAGAAATGAGCACAACAAATAATCAAGATGCATCAATCAACATTTATTGCATAGAGATTAAGCACGACAATTACATATCTCCTAACCAAGACCTAAAGTTACTTAGTTCATAAAGTGCATAGTAACACACGTTACAATTTGAGTAAATGCATCCATAATTACAAAATAATACAAGAAAATACTAATTCCCTTGATCAACTTCGTAATTGATGGTCTTCTTGTAGTCCTTAATCTTCCTCCTCTATTCGGCTCCCAATAGTGGAAATGAGAAGTGATCCCCTTCCAAGAATGGAATGTTCCTCCCCAAAAAGGAATGAATTTGACTTGAGACGACTCCTCCTTTTATAGAGTGATAGCAACCCTAATTAGGTCAAATTGGACATGTGGATGGCTCTCCTTGCTTCTTAAATCCGAGAATAACTCAACAAACTTCGGCTCATTAAAATGGATAACGAGCTATGACGTGGCAGTTTTGCTCCTTGCTTTGCTGGAGCACAGATTTTGCTCCCTCAAGTCGCTCAGCAATATTTTCTGCACAAAATAACTTCCAAAGCATCAATTCTTCCAAATGGGTTAAAACACATAATATCTATCTAAAAGCAACCCTATTTAGCACAAAAGACACACAAATCAATATAGAAATGAGGTCTAAATAACTCCCTTTTGGAGAGTTATCAGGCGGCCTGAAATCGAAGGAGGGAGGACCTCCCCTTCGATTTCTCGCCGGAAAATCGAGGGAGTGAGCTCCCTCTTTCGATTTTCCGGCAGCACATTTAAAAAAAAAAGTTTATGGAATATGAGAAGAAGAAGAAAAGATGAGGGAAGAAAAAAAAAAAAAAAAAAAAGGTCGCCGCCGGCGAACGGTGGTCGTCGGCCTCCGGCCGCCGCCGGCATGTTGAAGAAGAAGGGAAGAAGACAAGGTTGAAGGAAGAAGGAGATGGGGAAGAGAAAGAAGAAGGAGAAGAGAGAGGGAGAGAAAGAATTAAAAAATAATATTTTTATCATTTTAATATATTTTTATTTAAAAAATAAAAAAAAATATATTTTAAATTAAAATAATAGTGCCACGTCAGCAGCCCCGTTAGATTTAACGCCAAAATGGATGGCAGGGACTAAATTGCTCCTTATCTCAAACCTCAGGGGCTAAATTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTAACTTAACCCAAACCTTAGGGACCAAAAGTGTATTTTTCCCATTAATTAATTATTCAATTTAGTCTGATCAAATGTGATTTAATTAAACTATTATATGAGAGAAATATTAGAATATGATTTTAATGGGTAATTAATTAAATATGTATGATATATAATTAATTTTGAATTAATTAATTAATTTAATTAAATCAAATCTATAGATTAATTTGAATTTGAATTTTGATTTATATTAAAACTATAGGTTATAAGAGAGATGCACATTTGAATATGATTCAAATGTTAGATTAATTAAATATGTGATATTTAATTTATCAAAGAATTAATTAATTGTACAGTTTAATTAATTTAATTAAATACGATTTGATTAATTTTAATTAAAACTATAGACTATTTGAGGGAAATGCATTTAAATATGATTTAAATGCACATATGCCTAATCAATTAATATGATTAATTGATTAGTGTTTAATTGATTAATTGAATTGTATTTAATTAATTAATTATATTAAATGAAGTAATGAGATGACTATATGATGAGGTGGACGGTCGAGATTTGATCTCCCCTCCCGCACACGTGCCTCATGCCTAAGGGGTCTTGCAAGGGATGATGATTCTACAGATATCTCACTCCCTCAATCTCTCTCACTCTCTCACTCTCTCAGACTCTCAGACGCTCTCAACACAGTAAACGAAGGGAGTTCTTCCCTCTTTGTTTTTTCTCTCCCAAATTCGAGATTCGGAGTCCCACCATTCCGTTCCCAATCCCAGAGATATAGTGGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATTGTATACTTGTTTCAATAAAGTGTTATTGAGTTTCTACAATAAAGTGTCATTGTTAAATATTGCACAATTTGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTACATGTGACTTGAACTAGTATGTGGGGACATACGGGGATTGGTGTTCAAGTAACAACCTAAAAGGTCTATAGTACAAGGATAATGTTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATACAGACGTATTAATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATAGTAAACCACTAGATGTAACACCGTTAACTAGTTAGGTTACTGTTTCAATACGATGACCTAGGTAACTCAGTCTTAATCCTGAGTGTGTCATGAACTCCTTCTCATGAGGGATTGTCCTTTGATTAGCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGTCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACTTCTAAGAGAAGTAGATGAGTGTTCCCTTAAGTGGTGACTCCAGGACTTGAACAAAGGGATCCCGTCCTCTCACTAGCCCGAGAGGAACTTTCTGTTTAATGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGAGACAGATGTAACACAGGGGTAAAACGGTAATTTGACCCAACTGTAGTTACGAACACTTGTGAAGGATTGACTTACCGGTATAGGTCTATATCCGTGGACACAGAAATGTTCTACAGTGAGAAGAGTTCAGCTGTGGGTCTTTAGTGGAATGACCCACAGTTAATGAATATTGGTTAACCTGATTAATGAGTTTAATCGGTTAACCTCATATCATTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCCCTGCTAGCTCGTAAAGAGAAATTAGGAACAATTATATCTTGAGAGAATTTGAATAGTTCAAATTCATATTGGGAATTAAGTTAATTGTATGAGATACAAATTAATATAATGTATAATGATACATTAAAATATAAAGTCTAATTTGAAATTAAACTTTATTATTATGAAAGAAATAAATATTTGAAGAAGTTCAAATATCAATATGAATTTGATTCATATTAAATTTATAGGATATAAGAGAATTGGAAGGAGTTCCAATTTTAATATGAATTTGATTCATATTATAGAATTAATTAATTGAAGGCCTGAAATTAAATATATGATATTTAATTAGGTAATTAATTAATTAACTAATAGAAGGTCTGAAATTAAATATATGATATTTAATTGGTGATTAATTAATTTAAAGAATTAATTAATTGGAAATTAATCAATTATGAAAATGATTAATTACTTATGGAAGTAATTAATCATTTATGGAAATGATTTAATCACTTATAGAAGTGATCAATCATTTATGGAAAAGATTAATCAATTATGGAATTGATTGGTTATGGAATTGATTAATTATGGAAAAGATTAAATCAATTATGGAAATAATTGATTTTAAATGAATATTTTATTCATGACCTTTCTCCTATAAATAGAACACTAACCCTAGGGTTTATGTGATAGAACATATGGCCACCATAAGGCCCTCTCATATTCTCTCAACCCAAGAACTCTAGGGAGAATTTTCTCTCTAGAGTTTTTCCCATTCAAGATTAGGTAGTCCCACAACTACGTTCCTAATCTCAGAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGTAGAGCAATCAAGAATCATGTCCGATGAAGTATTCAGAGTCGTCAACGGAGGTATGTTTTTCACCGCTTAACCTTTTGCCAATGCATTGGTATTTTGTAGAACAAAATTAATTTACGAACGGTCCAATTGCTTCCGCTGTAATGGAATTGGGGAATTCCAATCCTTCAAGTGGGGATGGCTATATGGTGGTGTCCGTTGAACAATTCAGAGTCGTCAACGGAGGTATGCTTCTTTTCCATTAGATATAGATCTAATTATTAAATGCTTCGCCTGTAGAATTGTTCTGAATATTATTCCCAATGTATCCGGTATTTTGTTAAACAAAATTACATACGAACGGTCCCAATTGCGCTTCCGCTAACGGAATTCGGAATTCCAATCCTTCACATCTTTATCTAGTCGTCGCTCCTCCACTGGTTTTCCGGTAGCCGTCTGCCATAGGAGTTCATTTTCTTCGTGGCCCTAGGGTTTGTGAGTTTGTTGTTGCCGCACAGATCTAGTGAAGGAACAGCGATTTGGTACTTGGAAACTCTTGATATCAATTCTGTGAGAATTTATTTCGATTATAGCATAGGAGAAATCTGATGCAAGGCGACCTCTTTTAGGACTTCACGCGTCTTTCTTCCTTGCGAGTTGCGTCGTTCGTTCTCTCACAACCTTGTAACCGTACTCCAAATTTCAGCCAACGTCACAACCTCCACCCATTCCGACAACGATGCAGCGCCTGAACCCGACACCTTTGTTCCAGCCAACGCCCCGCTCTTGTTTCGGCAACGACGTGAGGTTCTCTTCTAACTCGATTTTGCTTTGTTTTATTATTCTTCCAGCCCGATTTCCAACTTTTCCCACCGTCCCCTTCATTCAATTCCTTGGCAACCCATCTTCTCAGATTCTTCCTCCTTCGTTGTAATCTGAGTCGTCGTCGCATTCTTCATTGATTTAATATATGCTCTATCAAACCCATTGCTTGTTTTCCTCATCTCTATCGTTTTCTTCTCAATTTTAGGTCGTTATTTTCCTCTCGGATATGATTCCATCAATACCTTATAAGTGGGCTTTCTTTTCCCCTCCACGTAACTTCGCTTTTTGTTCAATTTTCTATTTGATTTCTTTATTTTGTTTCGTTGTTCTTGGATGCCCCTGAGGTACTTTCTGGATTTAACGAATTGGGAGGTCTTGTAATTGTTGAATATGATCATAATTATTAGGTTAAATTATTAAAAATAGTACCAAGCCAATCAATTCATTGAAAGCATTCATGTTGGAGTATCCTTTCTAACCCAATTGGTAGACTTGTAACTTTGTAGTCATGTAAATCTTGGTGATAACATTTTCTATTTTGTACGGTGGAAATATGCTCTGTCACTTGCTTTAGCTTCTCTTGCTCACCCTGAAGGATTGGAATTCCTAAATTTCCAGTGGAAGCGTATAGGACCGATTCGTATTTTAATTAAGTTTTCTAAAATACCAGTGCATTGACAAATTATACAAAACAATTCTATATATAAACTAGGCTAAGCATGCATTAGATTTAAATCTAATAATTAAAAGAATGAAATACTTACTTGTTGACTTTCTTCAATGAACTCCCACCAAGAATAATATGATCACAGTAGGGACACTACCATCGAGATCTTCCACTGCTATATCTCTTGGACTAGGAACCAAGTTGTGGGACTTAGTGTTTTTGAATTTTGGGAAAAAAATTTTACTAGAATGTTGTGAAATTCCTATAGAGAAATTTTGCTTGAGAGCAAAGTCTTGTGTTATGAGTTTTGTCAATTGGGAAGACATTATGTCCTTTATATAAAGTGTCATAACCCTTTCCTATTCATAATATGTTGGGGATATATTTAATTAATTAATAAATAATTACTCTTCCCAATTCTAATAGGATGTGGATTCATTTAATTAATTAATTAAATTAATAATTAAATTAAATTTAATTAATTTCATTTAAATCATATTTAAATGAATATCTCCCACATAACCAATAGTTTTTAATTAAATAAAATTCAATTAAATTAAATAATTAATTAATTCTCCAATTAATTAATTACTAAATCATATTTAATTTAAGCCTACAACTAAATCGTATTTAATTGCATTTCTCTCAATTAATAAAGATTAATCTTAAATTAAACTTTATATTATAACGTATCACATACATTATATTAATTGTATCTCATACAATTAATTCTCTTAAAAAAAAAATCTCATACAATTAACTTGATTTCTCATAATGGATTTTGAACTATTCAAATTTCCTTCAAGACTAATTGTTCCTAATTACCCTTTTTGGCTAGCATGGGGACCTAATGGACCTACAGATTAGAAGCTCTAATGATATGAGGTTTAAATGACTAAACTCATTAATCAATTTAACTAATGTTCATTAGCTGCGCGTCACTCCACTAAAGATCCACAACTGCACTCTTCTCACTGCAGAATATTTCTGTTTCCACGAATATAGACCAATAACGGTAAGTCAATCCTTCACGAGTGTTCGAAACGCCAGTTGGGTCAAATTACCGTTTTACCCCTGGGTTACCTCTGTCTCCTTGAGTACCACTGATTTTTCTAATGAACAACCTGTTTATGGTCCAACCAGTAAACGAAAGTTTCTCTCGGGCCAGGAGAGGATGGGCGCCCTTGTTCAAGACTCGGAATCAGCTCTTAAGGGAACACTCATCTACTTTCCCTAAAAACAGGAAGGAGTGAATTCCATCTTATGTTGTTATGTTCCCAACTCACACTCAGTCTTATCTCTGAAATGGTAGGCTTATTGAGTCGACGAATCTAGCCACTCTCACCCATACAAATCTAAGGATAATCTCTCAAGAAAAGGAGTCCATAACACACTCAGGATTAAGATTGAATTACCTAGGTCATCCTATTGAAATAGAAACCTAACTAGTCAACGGTGTTACATCTAGGGGTTACTATTTAGTGGTTCGGTCTTATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCCAATACATGAACGCGTTGGATCAATGCGTTTGTATCGAATACACCAGGATAAGGTACCCAACCTTATCCCTCTATCATAGACCCTTTAGGTTGTTACTTGAACATTGATCCCCGTATGTCTCCACATACAGTTCAAGTTTCATAAAACAACCTTAGGTGTTTATTTTATTGGATTTAAGGTTAATTATTGCAAGACTAAGAATAAAAAATTCAATAACTCCTTATTGAATGATTTCAATACCTCTTTATTGATATTAATTAATTTGTTACATTTATTATCCACGAGTTTTAAGACATAAAACCCAACAAACTCCCACTTGAACTAAAACTCTAGTGGGGTGTACATCAACATAATAATCCAAAACCAGTGGGTTGTGTTATTACAGTATAATATATACTTGAAAAATACAATAAACTAAGGCATCCAGTATACCCATTCTCCAACTTGCCCTAGATTATGCTATGTACATATCTCGCAGACCTAGACTCTCTAGATGGCCCTCGAACACTTGAGCCGTGAGAGCCTTCGTAAATGGATCAACAATATTGTGCTCCGAGGTTATCTTTGTGATGACCACGTCCCCTCGTTGCACTATCTCCCGAATGAGATGATATTTGTGTTCTATGTGTTCGCCTCTTTTATGGCTGCGAGGTTGTTTAGAATTTGCCACTGCATCACTATTGTCACAATAAAGGGTGATTGGCAAGTTCATATTTGGAACAACTTCCAAATCTGTGAAGAACTTCCTAAGCCATACAGTCTCCTTAGCTGCTTCACAAGCAGCGACCTATTCAGCCTCCATGGTGGAGTCTGCAATGCATCCTTGCTTGATGCTACGCTAGACTATAGCTCCCCCGTTGAGGGTGAACACTGACCCTAATGTGGATTTCCTAGAATCCCTATCAAACTGAAAGTCAGAATCTGTGTATCCTGTAAGGATCAAATCCTTAGCGCCATACACAAGCATATAGTCCCTCGTTCTCTAAAGATACTTGAGGATGTTTTTCACAGCAGTCCAATGGCTAACCCTAGATTGGATTGATATCTACTGACTACCTCTACTGCATAGCATAAGTTTGGCCTAGTACACAACATGGCATACATCAGGCTGCCCACAACTGAAGCATAGGGAATTCATCTCATGTCCTCAACTTCTTGAGGTGTCTTAGGACACTGTTCCTTAAACAAATGAATCTCATGCCTGAAAGGTAGCAAACCCTTGGAATTTTGCATCTTATATCCAACTAATATCTTGTCGATATAAGATGCTTGAGACAATACTAGAATTTTGTTCTTACGATTCCTTATAATTTGAATCCCAAGAACATACCGTGCCTGTCCCAAATCTTTCATTTGGAACTGGGCTGCTAGCCAAGTTTTAACGTCACTAAGATATCCTACATCATTCCCAATGAATAGGATATCATCTATATACAACACCAGAAAAAACTATTGAATTGTTGATGATTTTCTTGTAGATACAAGGCTCATCAACATTCTGGTCAAAGCCATAAGATTTGATCGCAGTATCAAACCTTATGTTCCAAGATTGAGATGCTTGTTTCAATCTGTAAATGGATTGATTAAGCTTGCAAACTTTTTGCTCTTGACCTTGAGCAATGAACCCCTCTGGTTGAGACATAAAGATGCACTCCTCAAGGTTGCCATTCAGAAAGGCAGTCTTGACATCCATTTGCCATATTTTATGTCATAAAAGGTGGCAATGGACAAGAGTATCCTTATCGACTTTAAAATCGCAATAGGAGAGAAGGTTTCCTCATAGTCCACCCTTCCTTTTCCAGCTACGTCTCGTTTCCTCTTGTAGATCCATTTACACCCTATGGGTTTTACCCCTTCAAGTTGATCTACAAGGTCCAGACTGAATTGGAGTACATAGACTCCATTTCAAGGTCCATAGCTTTGACCCACTGGTCCTTATCCACGTCATTCATTGCATGTTTATAGGTCAATGGATCCTCGATGCCATCATCAGGTATGACAACTGGAGTTTCAACTAAACCCAAAAGGCGTTTAGGTTGTATAACAACTCTCCCACCACGTCGAGGCATTCTCAACTCTTGAGAAGGACGGGAGTGACCGGATGTACTAGGTCTATCAACAACTCTTGTTGATGTATCTGTAGCTTCACCAGAAAGCTCACTTAACATTATCTTACTACGTGATTTATGATCTCTAACGTGGTCTTCTTCTAAGAAAACAGAATTTGTCGATACAAGTACTTTATTTTCTTGTGGATCGAAGAAATATCCAACTCTCGTTTTCTTGGGGTAGCCTACAAATAGGCATAATTTCGAACGAGGTTCCAGTTTCTTCGGGTTTGTCTCCAGCACGTGTGCAAGACAACCCCAAAATCTGAAATGACGTAAACTAGCTTTACGCTCTCTCCAGAGCTCAAAAGGTGTTTCAGAATTACTTTTTTATGGAACTACATTCAGAATGTAAACTACAGTCTCTACTGCAAAACCCCAAAAGGAGTTAGGCAACTGAGCATAACTCATCATAGAACGAACCATGTCTAACAAAGTTATGTTTCTCCTTTCTGATACACCATTCTGTTGAGGTGTACCAGGTGCTGAGAGTTGAGACGTGATTTCATGTTCTATCAAATAGTTATGGAATCTTAAGTCCATATACTCTCCACCTCGATCAGATCGAAGTGTTTTAATGGTTTTACCTAACAAGTTTTCAACTTCAGCCTTATACTCCTTGAACTTTTCAAGTGCTTCAGACTTATGACTCATTAGGTATAAATAACCATACCTTGAATAATCATCTATGAAAGAGATGAAGTATTCGTACCCTCCTCGAGCTTTAACATTCATTGGACCACAGAGATCCGAATGTATGAGCTCTAAGGGCTCTTTGGCTTTGTAACATTTTCCAGTAAAAGGTCGTTTTGTCATTTTATCTTCGAGACAAAACTCACATGGAGGTAAATAATCATCTTCTAACTTATTTAGAAGTCCATTCTTAACCAATCTCCCAATCCTATTGAGATTAATGTGGCCAAGCCGCAAATGCCAAAGATAGGTATATTGAGAAACTTTTTGCCTTTTAGGTTGAGTCTCAGTAGTTTTAAACATCTCATGATTTAAAATTGCTTTTGACTCTATTGATCTTAAAACATACAAGTTATTTTCTAACTTTGCATAACAAATATCAATTCCCCTTTTTGTAATGACCGCTTCATTAATTGAAAAGGAAATGGAATAACTTTGTTCCAGCAAACAAGATACAGAAATCAAACTTCTTTTAATCTTTGGAACCAGTACTAGAATTTTGACATTTTATGACACCATAATCAAACCAAATAAAGGAGAGGAGGAAAAAAAAACGTCATAAATGATTGGGCCGCGTTTTTGGCGAGAAAAGACGGAAGTTTTCGTATTTTTTATATTCTATGGCATTTTTTCAATGTCATAGATTTATGGCTTTGATTAACTGTCATTAATTAGAAAAAAATTAAAAAAAGAAAAAGTAGAATTTAAAAAGAAAAGAAAATCAAAAGCCCTCAGTCTCTCCTCTTTCGATTTTCCATCTCCCTAACCTCTCGTTCCATCCCTCACGTCGTCCTCTCCTCACCTCTCTCTCTAACCTCTCGTTCCATCCCCTTGTGTCGTCGTCACCTCCCTCACGCCGCTGTCTCAGATCGTATCTCTGCCCATCGAGCGCTTTTGTCGCCTCTCTCCCTCGGACCGTTTCTCTCTCTCTCGCACCTTCTCCAGCCGTCGTGGCCACTGTTGACGCCACAGCTCCTCCAGCCACCGGCGCACGCAGCAGCAACAACTAGGATCTCCTCCTTCGGCGTGTATGTGTGAGTTCTGGTAAGACACTGAAATCGATCTTATTTTCTTCGTGTTTTGAGCAGTCCAACAGCATCGAGGTGGGTCTTTTTCGACTGCTTCGACTATGTAGCAACGATTCGACATGATTCCAGCAACTCCTCTTCGTGGACAGTAGCTCTTCTTCAGGTTCCAATGATTTCGGGCTGTGGGTAAGCAAGATTAAAGCATTTTATGACTGATTATGGTGTTTAAATGTATACCCACAAAAGTTTGACCCCAGTTTTTAGGTACCCATTGAGATTGGAGCTCGAGTCGTCGAATTCGGATCAAATTAGAACCAAACCAGCAAGAAAGGTTCTATTTTTGCGAGGTACTTTCCCGAATTTGCTTCATTAGCTATTGTGTGTCAAGGGGAAATTAATAGAATAATTTCTCTTAATTTTGAGTACGTTTTATTGTATAACTAATTGTTAATTAAGGTCAAAATTGGCTCGTTGCTGGATTGTTTAGACGGCTTAAGTTATGGATCCAATTATGCAATCTAAGTAATCTAACTACTTAGACAACCTTGGCTAGGCTGGGGTTACTTATTGTGAATGGTTGCAAACTAAAAATGTCATTATGTATGGTTGAGTTATGGAATGTTTGATTACATGTGTTCTGGCGATACTAATCGCCTGGTTATTTGTGTTGGCATGTATGGTATGCTCTGAATAGTGTTGGCTTATTCATTCTAGATTTTTTCGTATTGACGGGCAAAAGTGACAAATGCTGAAAAAGCAATTGAAAAGGAGCCAGAACAATTCACTTATGGCTAAGAGGGAAGTAAATTTTATATCAGAAATCTAAAGTGGAGACTGGGAAGTTATCGACTTTGAAGCCCAGAATATTTCAAAACTCAAAACAGAACAAACCCACATTAATTCCAATCCTACTTTCCTATTTCCCTATGTCCCTATTGAAATTTATCTCAATTCGATGTGATTTTTTTCAAATCTTTGTCTCCTTGGGAAAAAAACTGAGAGAACTCATCTAACAGAAACTTTCTATTTCCATTTCCAATTTGACGGTCAAGAAGTAGGTTACTATTCAAACTGCCAACAATAGAATGTCTCGCTTATCAAACTTCTATCTTCTAACTTACAACTCCCTTCAAGCTTTTGGCTGGTATTTTTCTTTTGCTCTTACATTTTTCACCAATCTTTTTGTTGCACTTCGTCATCATGGTACTGTGTTTCTTGTTGGCAGGACGATTTCTCTTTACAGACTAGTGGGGAGTTTTGTAGCCACCAAATCCATTAGTGGTGCTTACTCTTTTGTAGGGGAACTAATCTGTAAGTTTCTTGCCCTTTGTTTGGTTGCTTGGGAAGTTGAGGAATCTGATAGAAAATGTTGAAGAATGTTGAATGGAACTGAGGAATGTAGGTTGAATTTGATAAGAGAAGTTCTTATGCTTTCCTTTTTCTTCCAAGGTTTCCTGCAAATTGCTGCATTGTTGGACATCATTCATGGAGCTGTTGGTAATTTAAAGGAACTTTGGTATTAATCTCTTGTTTGATATCCAAAATTGATACGGTTTTGACTTTTCCCTTAAATTTCATGCCTAGTACCAACTGGAGTGTTGCTTCCTCTAATGCATGGGGTGGGAGGGTTCATTTTCTGGTTGCAGTTGTTCAACAACTTGATGAGGTTCTCTCTCTTTCTCATTTTGCTGCTTTTTTTTTTTTTTCCTTTTTACTAAAAAGATACATTTTTCTTGTTGGATTTTTTCCTCCTACACTCCTTCTATAGAGCTGGAAGAAATTGTGGAATAATTGTGTACTCAATTGCATTATTAAAGAATAGTACACTGAGCCATAACTAATCATTACTGTTACAAGCACTTCAGTAATTCTTTCTTTTTGTTTGACAGGTTCAACAGTTGCCTTCTGTTTTCATCACTTTCTTGGCTTGGAGCTTATCTGAGGTAAATTCTTTTCCTTTTGCTTTCAAATTTGGTATATTTGGCTTATTCATCATTCCTTTGTTTAGTAATCTAAACAAAGAAAACTGGATAGTGCACAAACATACTTTTTTAAAACAAATATCTTAGAACAAAGTTCATGGCAGTCTCAAAGTAAAATGATACTAAGCTTCTTTTCTGTACTTGCTAGTTTGTTGTGTTCTTAACTATTTATTTCCATCGGTTTACCTGGAGCTCCATCTCTGCTTCATATTATAGTTCTTTGCTTTATGTTCTCTCTCACCTTTCGGATATTACTCATCTTCATATGTTTTCTTTTTCCTTTTTGAATTGGTTTTCTTGATTTTTACGTTGACGAATGAAATGGGTTCAGGTCATCAGATATTCTCATCATGCTTTGAATTGCTTGGGAGTTTTTCCATTTTGGCTTACATATCTTAGGTACTTCCTGAATGTTCTTCCAAAGAAAACTACATGTACTCAAAATGAGAAAAATAATTTTGATATTTGAATTTGTATTATTGTTTCTTCTAGGTACACGACATTCATAGTTTTGTATCTTATTGGAGTGACAATTGGTGAAAGTGAGTACACAATATCCAATTATCTTGATTTCTATAATTTGATATATCTCCAAAGGAGTTCATAGGTCAGCTTTGTACGGTCTAGAGTTGTGGAGCTGAGTTATGTGTGTTTACTTATTTTATTAATCATATTAGCTACATAAACCTAAGCTTCTAAAATACATTATCGAGCCATATATTTCTACAAAACACAAGTCTAGAAACCATGTATATGCTTATTACATAAACCTAGGTTTCGATAATTTATTCCTCTAAACAATCTAAATACTAATGCATAAACTCAAACTTCTTAACAGTAACTCACACAAAACAAAACTATGGTCATCAGAACTGAGAGTTAATCATCCCCTCTTCTCTTTACCGATCCTGTATTTTTACTGGTATAGTTTACAGTGGGTGATTCACAGAACAGAAACTAATATTCTACTTTATCAAGAAAAGCCCATTGGTGACTTATTAGAAGCATTTGTGCAGTGTGGGTTATTTACCAAGCAATTCCATTTATGATAAGAAGAACCTCTATGTAG

mRNA sequence

ATGAGCGAAATCGAGTGGGTCAAAGCTAAGCTTGCCGAAAACGCCACAACACTTCGATGGAGGGCTGGAAATCAGGCCAAACACGTGAATCGCTGCTGGTCGCGGGTTCAAGGTTGCTGGAATCACGAACCTGCTCCAGAATCGCGCAGGTTCCTTGATGCCAACGAAAAAGAGAGACGAGGAAGAGATATTTACGTCGTAGAGCTTAACGAGAACGAACTCGTGGATGTGCCGTCGGCTTGCTGCTCGAAGAAGGAGAAACGCGAGAGAGAGGAATCGCGAGGCTTGGGTCTTCTTGCTGCGCGCCGGAGAGATGCGATCGGAGGAAGAATGAGCCTTTGCGTGGGTGCTGGCCGGCGGGATGAAGGATCGAGAGGGACTTCACGCGTCTTTCTTCCTTGCGAGTTGCGTCGTTCGTTCTCTCACAACCTTGTAACCGTACTCCAAATTTCAGCCAACGTCACAACCTCCACCCATTCCGACAACGATGCAGCGCCTGAACCCGACACCTTTGTTCCAGCCAACGCCCCGCTCTTGTTTCGGCAACGACGTGAGCCGTCGTGGCCACTGTTGACGCCACAGCTCCTCCAGCCACCGGCGCACGCAGCAGCAACAACTAGGATCTCCTCCTTCGGCGTTCCAACAGCATCGAGGTGGGTCTTTTTCGACTGCTTCGACTATGTAGCAACGATTCGACATGATTCCAGCAACTCCTCTTCGTGGACAGTAGCTCTTCTTCAGGTTCCAATGATTTCGGGCTGTGGGACGATTTCTCTTTACAGACTAGTGGGGAGTTTTGTAGCCACCAAATCCATTAGTGGTGCTTACTCTTTTGTAGGGGAACTAATCTGTTTCCTGCAAATTGCTGCATTGTTGGACATCATTCATGGAGCTGTTGTTGTTCAACAACTTGATGAGGTTCAACAGTTGCCTTCTGTTTTCATCACTTTCTTGGCTTGGAGCTTATCTGAGGTCATCAGATATTCTCATCATGCTTTGAATTGCTTGGGAGTTTTTCCATTTTGGCTTACATATCTTAGGTACACGACATTCATAGTTTTGTATCTTATTGGAGTGACAATTGGTGAAATGTGGGTTATTTACCAAGCAATTCCATTTATGATAAGAAGAACCTCTATGTAG

Coding sequence (CDS)

ATGAGCGAAATCGAGTGGGTCAAAGCTAAGCTTGCCGAAAACGCCACAACACTTCGATGGAGGGCTGGAAATCAGGCCAAACACGTGAATCGCTGCTGGTCGCGGGTTCAAGGTTGCTGGAATCACGAACCTGCTCCAGAATCGCGCAGGTTCCTTGATGCCAACGAAAAAGAGAGACGAGGAAGAGATATTTACGTCGTAGAGCTTAACGAGAACGAACTCGTGGATGTGCCGTCGGCTTGCTGCTCGAAGAAGGAGAAACGCGAGAGAGAGGAATCGCGAGGCTTGGGTCTTCTTGCTGCGCGCCGGAGAGATGCGATCGGAGGAAGAATGAGCCTTTGCGTGGGTGCTGGCCGGCGGGATGAAGGATCGAGAGGGACTTCACGCGTCTTTCTTCCTTGCGAGTTGCGTCGTTCGTTCTCTCACAACCTTGTAACCGTACTCCAAATTTCAGCCAACGTCACAACCTCCACCCATTCCGACAACGATGCAGCGCCTGAACCCGACACCTTTGTTCCAGCCAACGCCCCGCTCTTGTTTCGGCAACGACGTGAGCCGTCGTGGCCACTGTTGACGCCACAGCTCCTCCAGCCACCGGCGCACGCAGCAGCAACAACTAGGATCTCCTCCTTCGGCGTTCCAACAGCATCGAGGTGGGTCTTTTTCGACTGCTTCGACTATGTAGCAACGATTCGACATGATTCCAGCAACTCCTCTTCGTGGACAGTAGCTCTTCTTCAGGTTCCAATGATTTCGGGCTGTGGGACGATTTCTCTTTACAGACTAGTGGGGAGTTTTGTAGCCACCAAATCCATTAGTGGTGCTTACTCTTTTGTAGGGGAACTAATCTGTTTCCTGCAAATTGCTGCATTGTTGGACATCATTCATGGAGCTGTTGTTGTTCAACAACTTGATGAGGTTCAACAGTTGCCTTCTGTTTTCATCACTTTCTTGGCTTGGAGCTTATCTGAGGTCATCAGATATTCTCATCATGCTTTGAATTGCTTGGGAGTTTTTCCATTTTGGCTTACATATCTTAGGTACACGACATTCATAGTTTTGTATCTTATTGGAGTGACAATTGGTGAAATGTGGGTTATTTACCAAGCAATTCCATTTATGATAAGAAGAACCTCTATGTAG

Protein sequence

MSEIEWVKAKLAENATTLRWRAGNQAKHVNRCWSRVQGCWNHEPAPESRRFLDANEKERRGRDIYVVELNENELVDVPSACCSKKEKREREESRGLGLLAARRRDAIGGRMSLCVGAGRRDEGSRGTSRVFLPCELRRSFSHNLVTVLQISANVTTSTHSDNDAAPEPDTFVPANAPLLFRQRREPSWPLLTPQLLQPPAHAAATTRISSFGVPTASRWVFFDCFDYVATIRHDSSNSSSWTVALLQVPMISGCGTISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAVVVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFPFWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFMIRRTSM

Homology

[Close]

BLAST of Lcy11g013080 vs. ExPASy Swiss-Prot
Match: Q9D3B1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN=Hacd2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-10
Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 243 VALLQVPMISGCGTISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV--- 302
           + +  V M +G   I++  LV +++A  S    Y  +   + F Q  ALL+I+H A+   
Sbjct: 42  LVIYNVVMTAGWLVIAV-GLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIV 101

Query: 303 --------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVF 362
                               V   + EVQ   SV +  +AW+++E+IRYS +  + L   
Sbjct: 102 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL 161

Query: 363 PFWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFM 375
           P+ + + RYT FIVLY +GVT GE+  IY A+PF+
Sbjct: 162 PYIIKWARYTLFIVLYPMGVT-GELLTIYAALPFV 194

[Close]

BLAST of Lcy11g013080 vs. ExPASy Swiss-Prot
Match: Q2KIP8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HACD2 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 4.0e-10
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 243 VALLQVPMISGCGTISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV--- 302
           + +  V M +G   I++  LV +++A  S    Y  + + + F Q  ALL+I+H A+   
Sbjct: 42  LVIYNVVMTAGWLVIAV-GLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 101

Query: 303 --------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVF 362
                               V   + EVQ   SV +  +AW+++E+IRYS +  + L   
Sbjct: 102 PSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL 161

Query: 363 PFWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFM 375
           P+ + + RYT FIVLY +GV+ GE+  IY A+PF+
Sbjct: 162 PYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFV 194

[Close]

BLAST of Lcy11g013080 vs. ExPASy Swiss-Prot
Match: Q6Y1H2 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=HACD2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.0e-10
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 243 VALLQVPMISGCGTISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV--- 302
           + +  V M +G   I++  LV +++A  S    Y  + + + F Q  ALL+I+H A+   
Sbjct: 42  LVIYNVVMTAGWLVIAV-GLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 101

Query: 303 --------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVF 362
                               V   + EVQ   SV +  +AW+++E+IRYS +  + L   
Sbjct: 102 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL 161

Query: 363 PFWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFM 375
           P+ + + RYT FIVLY +GV+ GE+  IY A+PF+
Sbjct: 162 PYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFV 194

[Close]

BLAST of Lcy11g013080 vs. ExPASy Swiss-Prot
Match: Q5RBK3 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=HACD2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.0e-10
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 243 VALLQVPMISGCGTISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV--- 302
           + +  V M +G   I++  LV +++A  S    Y  + + + F Q  ALL+I+H A+   
Sbjct: 43  LVIYNVVMTAGWLVIAV-GLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 102

Query: 303 --------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVF 362
                               V   + EVQ   SV +  +AW+++E+IRYS +  + L   
Sbjct: 103 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL 162

Query: 363 PFWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFM 375
           P+ + + RYT FIVLY +GV+ GE+  IY A+PF+
Sbjct: 163 PYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFV 195

[Close]

BLAST of Lcy11g013080 vs. ExPASy Swiss-Prot
Match: Q4W1W1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Canis lupus familiaris OX=9615 GN=HACD1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-07
Identity = 36/130 (27.69%), Postives = 66/130 (50.77%), Query Frame = 0


Query: 274 GAYSFVGELICFLQIAALLDIIHGAV-----------------------VVQQLDEVQQL 333
           G Y  + + + F Q  ALL+I+H  +                       +   +  +Q  
Sbjct: 67  GLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVAGVQVSSRIFMVWLITHSIKPIQNE 126

Query: 334 PSVFITFLAWSLSEVIRYSHHALNCLGVFPFWLTYLRYTTFIVLYLIGVTIGEMWVIYQA 381
            SV +  +AW+++E+ RYS +  + L   P+++ + RY  FI+LY +GV +GE+  IY A
Sbjct: 127 ESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGV-VGELLTIYAA 186

[Close]

BLAST of Lcy11g013080 vs. ExPASy TrEMBL
Match: A0A5D3DKD0 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00410 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.2e-45
Identity = 105/157 (66.88%), Postives = 116/157 (73.89%), Query Frame = 0


Query: 245 LLQVPMISGCG-TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---- 304
           LL    + G G  +SLYRLVG FVATKS SGAYS  GEL+CFLQ AA L++IHGAV    
Sbjct: 9   LLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVIHGAVGLVP 68

Query: 305 -------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFP 364
                              VV+QLDE+QQLPSVFITFLAWSLSEVIRY HHALNCLGV P
Sbjct: 69  TGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCP 128

Query: 365 FWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFMIRR 378
           FWLTYLRYT FIVLY IGVTIGEMW++YQAIPFMI++
Sbjct: 129 FWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKK 165

[Close]

BLAST of Lcy11g013080 vs. ExPASy TrEMBL
Match: A0A1S3BJI8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LOC103490580 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.2e-45
Identity = 105/157 (66.88%), Postives = 116/157 (73.89%), Query Frame = 0


Query: 245 LLQVPMISGCG-TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---- 304
           LL    + G G  +SLYRLVG FVATKS SGAYS  GEL+CFLQ AA L++IHGAV    
Sbjct: 9   LLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVIHGAVGLVP 68

Query: 305 -------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFP 364
                              VV+QLDE+QQLPSVFITFLAWSLSEVIRY HHALNCLGV P
Sbjct: 69  TGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCP 128

Query: 365 FWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFMIRR 378
           FWLTYLRYT FIVLY IGVTIGEMW++YQAIPFMI++
Sbjct: 129 FWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKK 165

[Close]

BLAST of Lcy11g013080 vs. ExPASy TrEMBL
Match: A0A0A0KG29 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G303230 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.7e-44
Identity = 102/157 (64.97%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 245 LLQVPMISGCG-TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---- 304
           LL    + G G  +SLYRLVG F ATKS SGAYS  GEL+CFLQ AA L++IHGAV    
Sbjct: 9   LLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGAVGLVP 68

Query: 305 -------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFP 364
                              VV+QLDE+Q+LPSVFITFLAWSLSEVIRY HHALNCLGV P
Sbjct: 69  TGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNCLGVCP 128

Query: 365 FWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFMIRR 378
           FWLTYLRYT FI+LY IGVTIGEMW++YQAIPFMI++
Sbjct: 129 FWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKK 165

[Close]

BLAST of Lcy11g013080 vs. ExPASy TrEMBL
Match: A0A6J1KZE6 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111499642 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.2e-43
Identity = 102/144 (70.83%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 256 TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---------------- 315
           TISLYRL+ +FVATKS SGAYS VGELICFLQ AA L+IIHGA+                
Sbjct: 45  TISLYRLLDNFVATKSTSGAYSSVGELICFLQTAAFLEIIHGAIGLVPTGVLLPLMQWGG 104

Query: 316 -------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFPFWLTYLRYTTFI 375
                  VV+QL EVQQLPSVFITFLAWSLSEVIRYSHHALNCLGV  FWLTYLRYT FI
Sbjct: 105 RVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVGLFWLTYLRYTAFI 164

Query: 376 VLYLIGVTIGEMWVIYQAIPFMIR 377
           +LY IGVTIGEMW++YQAIPFMI+
Sbjct: 165 ILYPIGVTIGEMWLMYQAIPFMIK 188

[Close]

BLAST of Lcy11g013080 vs. ExPASy TrEMBL
Match: A0A6J1KXE0 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111499642 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.2e-43
Identity = 102/144 (70.83%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 256 TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---------------- 315
           TISLYRL+ +FVATKS SGAYS VGELICFLQ AA L+IIHGA+                
Sbjct: 21  TISLYRLLDNFVATKSTSGAYSSVGELICFLQTAAFLEIIHGAIGLVPTGVLLPLMQWGG 80

Query: 316 -------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFPFWLTYLRYTTFI 375
                  VV+QL EVQQLPSVFITFLAWSLSEVIRYSHHALNCLGV  FWLTYLRYT FI
Sbjct: 81  RVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVGLFWLTYLRYTAFI 140

Query: 376 VLYLIGVTIGEMWVIYQAIPFMIR 377
           +LY IGVTIGEMW++YQAIPFMI+
Sbjct: 141 ILYPIGVTIGEMWLMYQAIPFMIK 164

[Close]

BLAST of Lcy11g013080 vs. NCBI nr
Match: XP_008448368.1 (PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo] >KAA0061952.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa] >TYK23978.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-44
Identity = 105/157 (66.88%), Postives = 116/157 (73.89%), Query Frame = 0


Query: 245 LLQVPMISGCG-TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---- 304
           LL    + G G  +SLYRLVG FVATKS SGAYS  GEL+CFLQ AA L++IHGAV    
Sbjct: 9   LLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVIHGAVGLVP 68

Query: 305 -------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFP 364
                              VV+QLDE+QQLPSVFITFLAWSLSEVIRY HHALNCLGV P
Sbjct: 69  TGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCP 128

Query: 365 FWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFMIRR 378
           FWLTYLRYT FIVLY IGVTIGEMW++YQAIPFMI++
Sbjct: 129 FWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKK 165

[Close]

BLAST of Lcy11g013080 vs. NCBI nr
Match: XP_038900764.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 6.9e-44
Identity = 99/144 (68.75%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 257 ISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV----------------- 316
           +SLYRLVG+F ATKS SGAYS  GEL+CFLQ AA L+IIHGAV                 
Sbjct: 22  VSLYRLVGNFAATKSTSGAYSSTGELVCFLQAAAFLEIIHGAVGLVPTGVLLPLMQWGGR 81

Query: 317 ------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFPFWLTYLRYTTFIV 376
                 VV+QLDE+QQLPSVFITFLAWSLSEVIRYSHHA NCLGV PFWLTYLRYT FIV
Sbjct: 82  VHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYSHHAFNCLGVCPFWLTYLRYTAFIV 141

Query: 377 LYLIGVTIGEMWVIYQAIPFMIRR 378
           LY  GVTIGEMW++YQAIPFM+++
Sbjct: 142 LYPTGVTIGEMWLMYQAIPFMVKK 165

[Close]

BLAST of Lcy11g013080 vs. NCBI nr
Match: XP_004148217.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucumis sativus] >KGN47357.1 hypothetical protein Csa_023054 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-43
Identity = 102/157 (64.97%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 245 LLQVPMISGCG-TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---- 304
           LL    + G G  +SLYRLVG F ATKS SGAYS  GEL+CFLQ AA L++IHGAV    
Sbjct: 9   LLTYNSLQGFGWMVSLYRLVGDFAATKSTSGAYSSTGELVCFLQTAAFLEVIHGAVGLVP 68

Query: 305 -------------------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFP 364
                              VV+QLDE+Q+LPSVFITFLAWSLSEVIRY HHALNCLGV P
Sbjct: 69  TGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNCLGVCP 128

Query: 365 FWLTYLRYTTFIVLYLIGVTIGEMWVIYQAIPFMIRR 378
           FWLTYLRYT FI+LY IGVTIGEMW++YQAIPFMI++
Sbjct: 129 FWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKK 165

[Close]

BLAST of Lcy11g013080 vs. NCBI nr
Match: XP_023532298.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-43
Identity = 103/144 (71.53%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 256 TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---------------- 315
           TISLYRL+ SFVATKS SGAYS VGELICFLQ AA L+IIHGA+                
Sbjct: 21  TISLYRLLDSFVATKSTSGAYSSVGELICFLQTAAFLEIIHGAIGLVPTGVLLPLMQWGG 80

Query: 316 -------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFPFWLTYLRYTTFI 375
                  VV+QL EVQQLPSVFITFLAWSLSEVIRYSHHALNCLGV  FWLTYLRYT FI
Sbjct: 81  RVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVGLFWLTYLRYTAFI 140

Query: 376 VLYLIGVTIGEMWVIYQAIPFMIR 377
           +LY IGVTIGEMW++YQAIPFMI+
Sbjct: 141 ILYPIGVTIGEMWLMYQAIPFMIK 164

[Close]

BLAST of Lcy11g013080 vs. NCBI nr
Match: XP_022947848.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 186.4 bits (472), Expect = 4.5e-43
Identity = 102/144 (70.83%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 256 TISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV---------------- 315
           TISLYRL+ SFVATKS SGAYS  GELICFLQ AA L+IIHGA+                
Sbjct: 50  TISLYRLLDSFVATKSTSGAYSSAGELICFLQTAAFLEIIHGAIGLVPTGVLLPLMQWGG 109

Query: 316 -------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFPFWLTYLRYTTFI 375
                  VV+QL EVQQLPSVFITFLAWSLSEVIRYSHHALNCLGV  FWLTYLRYT FI
Sbjct: 110 RVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVSLFWLTYLRYTAFI 169

Query: 376 VLYLIGVTIGEMWVIYQAIPFMIR 377
           +LY IGVTIGEMW++YQAIPFMI+
Sbjct: 170 ILYPIGVTIGEMWLMYQAIPFMIK 193

[Close]

BLAST of Lcy11g013080 vs. TAIR 10
Match: AT5G59770.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-22
Identity = 58/144 (40.28%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 257 ISLYRLVGSFVATKSISGAYSFVGELICFLQIAALLDIIHGAV----------------- 316
           ISL  ++ SF++ K+I  AY+  G LI   Q AA+L+++HGA+                 
Sbjct: 73  ISLLIILNSFLSNKTIISAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGR 132

Query: 317 ------VVQQLDEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVFPFWLTYLRYTTFIV 376
                 +V Q+ EVQ  P + IT +AW + E+IRY H+A  CLG  P+WLTYLRYT FIV
Sbjct: 133 THFILAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLRYTGFIV 192

Query: 377 LYLIGVTIGEMWVIYQAIPFMIRR 378
           +Y  G+ +GE+ ++Y+A+P++  R
Sbjct: 193 IYPTGL-VGELLIMYKALPYVKER 215

[Close]

BLAST of Lcy11g013080 vs. TAIR 10
Match: AT5G10480.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-06
Identity = 37/121 (30.58%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 276 YSFVGELICFLQIAALLDIIHGAVVVQQLDEVQQLPSV----FITF-------------- 335
           Y  + + +   Q AA+L+I+HG V + +      LP +    F+T+              
Sbjct: 44  YDAIEKPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFL 103

Query: 336 -----LAWSLSEVIRYSHHAL-NCLGVFPFWLTYLRYTTFIVLYLIGVTIGEMWVIYQAI 373
                ++WS++E+IRYS       LG  P W  +LRY++F++LY  G+T  E+ +IY A+
Sbjct: 104 VTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLAL 163

[Close]

BLAST of Lcy11g013080 vs. TAIR 10
Match: AT5G10480.2 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-06
Identity = 37/121 (30.58%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 276 YSFVGELICFLQIAALLDIIHGAVVVQQLDEVQQLPSV----FITF-------------- 335
           Y  + + +   Q AA+L+I+HG V + +      LP +    F+T+              
Sbjct: 19  YDAIEKPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFL 78

Query: 336 -----LAWSLSEVIRYSHHAL-NCLGVFPFWLTYLRYTTFIVLYLIGVTIGEMWVIYQAI 373
                ++WS++E+IRYS       LG  P W  +LRY++F++LY  G+T  E+ +IY A+
Sbjct: 79  VTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLAL 138

[Close]

BLAST of Lcy11g013080 vs. TAIR 10
Match: AT5G10480.3 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 42.4 bits (98), Expect = 9.8e-04
Identity = 37/130 (28.46%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 276 YSFVGELICFLQIAALLDIIHGAVVVQQLDEVQQLPSV----FITF-------------- 335
           Y  + + +   Q AA+L+I+HG V + +      LP +    F+T+              
Sbjct: 44  YDAIEKPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFL 103

Query: 336 -----LAWSLS---------EVIRYSHHAL-NCLGVFPFWLTYLRYTTFIVLYLIGVTIG 373
                ++WS++         E+IRYS       LG  P W  +LRY++F++LY  G+T  
Sbjct: 104 VTSLVISWSITEFPITTWIVEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-S 163

The following BLAST results are available for this feature:

BLAST of Lcy11g013080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9D3B1	2.3e-10	32.26	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN...	[more]
Q2KIP8	4.0e-10	31.61	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HA...	[more]
Q6Y1H2	4.0e-10	31.61	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=...	[more]
Q5RBK3	4.0e-10	31.61	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=...	[more]
Q4W1W1	1.1e-07	27.69	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Canis lupus familiaris O...	[more]

BLAST of Lcy11g013080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DKD0	5.2e-45	66.88	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BJI8	5.2e-45	66.88	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KG29	5.7e-44	64.97	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis sativus OX=3659 GN...	[more]
A0A6J1KZE6	2.2e-43	70.83	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1KXE0	2.2e-43	70.83	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Lcy11g013080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448368.1	1.1e-44	66.88	PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucu...	[more]
XP_038900764.1	6.9e-44	68.75	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida]	[more]
XP_004148217.1	1.2e-43	64.97	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucumis sativus] >KGN47357...	[more]
XP_023532298.1	2.0e-43	71.53	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucurbita pepo subsp. pepo...	[more]
XP_022947848.1	4.5e-43	70.83	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucurbita mosch...	[more]

BLAST of Lcy11g013080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59770.1	2.1e-22	40.28	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.1	4.7e-06	30.58	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.2	4.7e-06	30.58	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.3	9.8e-04	28.46	Protein-tyrosine phosphatase-like, PTPLA	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007482	Protein-tyrosine phosphatase-like, PTPLA	PFAM	PF04387	PTPLA	coord: 285..376 e-value: 4.2E-21 score: 75.3
IPR007482	Protein-tyrosine phosphatase-like, PTPLA	PANTHER	PTHR11035	PTPLA DOMAIN PROTEIN	coord: 299..377
IPR007482	Protein-tyrosine phosphatase-like, PTPLA	PANTHER	PTHR11035	PTPLA DOMAIN PROTEIN	coord: 254..299
None	No IPR available	PANTHER	PTHR11035:SF35	VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE	coord: 299..377
None	No IPR available	PANTHER	PTHR11035:SF35	VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE	coord: 254..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g013080.1	Lcy11g013080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030497	fatty acid elongation
biological_process	GO:0030148	sphingolipid biosynthetic process
biological_process	GO:0042761	very long-chain fatty acid biosynthetic process
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
molecular_function	GO:0018812	3-hydroxyacyl-CoA dehydratase activity