Lcy11g012670 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g012670
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	E3 ubiquitin-protein ligase RNF126-like
Location	Chr11: 18461462 .. 18462199 (-)
RNA-Seq Expression	Lcy11g012670
Synteny	Lcy11g012670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACACCGCTCCCGCCTCCCCCCGTGCAAAATCAAAACTCTGTTTATCGATTCTCTGTTTTTGGGTTTGATCAGAGACAGACTCAGAGCCACCATGTCTTTCTTCTCCACGAATTCATGCCTCCAATACTCTATCCGCACCACTGGAAACAGCAGCGGCAATCAAATTCTGAAACTCCGATTAGGGCATTGTAGCCGCCTGATTTCTGGATTTCCACACCAAATCTTGCAGCAAACTCCGTCGACTCTGATGGGGGAGGCTCTGTTTCCTCTCTGTTTGAGGGAGCGTGAAGAAGAAATGCGGTTCCTGGCCCACTTTCGCGTGGTTGAGTTTCTGTGTTCGTTCAACTTCCGTAGCTCCGTCGGCGACGTTATCTTTGAGAAGATTGCCTCCGTTGCGGCGGGCGGCTTCAGCGTAGAGGCGGACATCGACTACGTGATGATGTTTTGGATGGAGGGAGAGGGCATCGGAGAGGAGGAGATTCCGATGGTTGAAGAAGGTGGAAGAGGGGCGCCAGAGTGGGCGATTGAGAGACTGATGGAGCAGAAATTTGATGGGATTGGGATTGGGATTGGGAAGGAGGATAGTTGCAGTGTGTGCTATGATGAACTAGAGAGCGGGAACGGAGAGGAGATGACGAAGATGCCTTGTGGACACGTGTATCACAAACCCTGCATTTTGACCTGGCTTCAAAGGAGCAACTCCTGCCCTAATTGTCGAAGCAAATTACAATAA

mRNA sequence

ATGAGACACCGCTCCCGCCTCCCCCCGTGCAAAATCAAAACTCTGTTTATCGATTCTCTGTTTTTGGGTTTGATCAGAGACAGACTCAGAGCCACCATGTCTTTCTTCTCCACGAATTCATGCCTCCAATACTCTATCCGCACCACTGGAAACAGCAGCGGCAATCAAATTCTGAAACTCCGATTAGGGCATTGTAGCCGCCTGATTTCTGGATTTCCACACCAAATCTTGCAGCAAACTCCGTCGACTCTGATGGGGGAGGCTCTGTTTCCTCTCTGTTTGAGGGAGCGTGAAGAAGAAATGCGGTTCCTGGCCCACTTTCGCGTGGTTGAGTTTCTGTGTTCGTTCAACTTCCGTAGCTCCGTCGGCGACGTTATCTTTGAGAAGATTGCCTCCGTTGCGGCGGGCGGCTTCAGCGTAGAGGCGGACATCGACTACGTGATGATGTTTTGGATGGAGGGAGAGGGCATCGGAGAGGAGGAGATTCCGATGGTTGAAGAAGGTGGAAGAGGGGCGCCAGAGTGGGCGATTGAGAGACTGATGGAGCAGAAATTTGATGGGATTGGGATTGGGATTGGGAAGGAGGATAGTTGCAGTGTGTGCTATGATGAACTAGAGAGCGGGAACGGAGAGGAGATGACGAAGATGCCTTGTGGACACGTGTATCACAAACCCTGCATTTTGACCTGGCTTCAAAGGAGCAACTCCTGCCCTAATTGTCGAAGCAAATTACAATAA

Coding sequence (CDS)

ATGAGACACCGCTCCCGCCTCCCCCCGTGCAAAATCAAAACTCTGTTTATCGATTCTCTGTTTTTGGGTTTGATCAGAGACAGACTCAGAGCCACCATGTCTTTCTTCTCCACGAATTCATGCCTCCAATACTCTATCCGCACCACTGGAAACAGCAGCGGCAATCAAATTCTGAAACTCCGATTAGGGCATTGTAGCCGCCTGATTTCTGGATTTCCACACCAAATCTTGCAGCAAACTCCGTCGACTCTGATGGGGGAGGCTCTGTTTCCTCTCTGTTTGAGGGAGCGTGAAGAAGAAATGCGGTTCCTGGCCCACTTTCGCGTGGTTGAGTTTCTGTGTTCGTTCAACTTCCGTAGCTCCGTCGGCGACGTTATCTTTGAGAAGATTGCCTCCGTTGCGGCGGGCGGCTTCAGCGTAGAGGCGGACATCGACTACGTGATGATGTTTTGGATGGAGGGAGAGGGCATCGGAGAGGAGGAGATTCCGATGGTTGAAGAAGGTGGAAGAGGGGCGCCAGAGTGGGCGATTGAGAGACTGATGGAGCAGAAATTTGATGGGATTGGGATTGGGATTGGGAAGGAGGATAGTTGCAGTGTGTGCTATGATGAACTAGAGAGCGGGAACGGAGAGGAGATGACGAAGATGCCTTGTGGACACGTGTATCACAAACCCTGCATTTTGACCTGGCTTCAAAGGAGCAACTCCTGCCCTAATTGTCGAAGCAAATTACAATAA

Protein sequence

MRHRSRLPPCKIKTLFIDSLFLGLIRDRLRATMSFFSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIASVAAGGFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ

Homology

[Close]

BLAST of Lcy11g012670 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.7e-09
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 196 DSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           + C+VC D+ E G   E  +MPC H+YHK C+L WL+  NSCP CR +L
Sbjct: 222 NQCAVCMDDFEEGT--EAKQMPCKHLYHKDCLLPWLELHNSCPVCRHEL 268

[Close]

BLAST of Lcy11g012670 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.3e-09
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 195 EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           + +C VC DE E G+  E  +MPC H+YH  CI+ WL + NSCP CR +L
Sbjct: 187 DSNCPVCKDEFELGS--EAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

[Close]

BLAST of Lcy11g012670 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.3e-09
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 196 DSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           + C+VC DE E  +G ++ +MPC HV+H+ C+L WL+  NSCP CR +L
Sbjct: 214 NQCAVCMDEFE--DGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of Lcy11g012670 vs. ExPASy Swiss-Prot
Match: Q9Y7K6 (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.04c PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-08
Identity = 19/48 (39.58%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 197 SCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           +C +CYD++   + ++ TKMPCGH++ K C+  WL+   +CP CR ++
Sbjct: 106 TCPICYDDMNENDEKQATKMPCGHIFGKNCLQKWLENHCTCPLCRKEV 153

[Close]

BLAST of Lcy11g012670 vs. ExPASy Swiss-Prot
Match: Q8NG27 (E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens OX=9606 GN=PJA1 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-08
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 192 IGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCR 242
           +G+E  C +C  E     GE  T++PC H +HKPC+  WLQ+S +CP CR
Sbjct: 589 VGQEMCCPICCSEYV--KGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636

[Close]

BLAST of Lcy11g012670 vs. ExPASy TrEMBL
Match: A0A6J1G7L1 (NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.5e-37
Identity = 103/230 (44.78%), Postives = 132/230 (57.39%), Query Frame = 0


Query: 36  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALF 95
           F+  S L+YS+R   N   +Q+L+LRLG+ SRLIS     G P+ IL++TPST M +ALF
Sbjct: 3   FANASTLRYSLRR--NHGADQLLQLRLGYSSRLISRSPSAGLPYDILEETPSTPMADALF 62

Query: 96  PLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIASVAA--------GGFSVEA 155
           PL LRE E+ +    H  +VE + SFN  S   + I +KI S             F + A
Sbjct: 63  PLPLRELEDPL--FCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQWAAVDYDAKFQLVA 122

Query: 156 DIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKED 215
           DIDY+ MFWME      G G+  EE  ++EE G  A E                GIG E+
Sbjct: 123 DIDYIQMFWMEKHRGSVGRGVMVEERVVLEETGVAAAEKQ--------------GIGGEE 182

Query: 216 SCSVCYD--ELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
            CSVCY+  E E G  +E+ K+PCGH +HK CILTW QRSNSCP CR+KL
Sbjct: 183 -CSVCYESYEAEKGGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRAKL 213

[Close]

BLAST of Lcy11g012670 vs. ExPASy TrEMBL
Match: A0A6J1L387 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499493 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34
Identity = 97/224 (43.30%), Postives = 132/224 (58.93%), Query Frame = 0


Query: 36  FSTNSCLQYSIR--TTGNSSGN----QILKLRLGHCSRLISGFPHQILQQTPSTLMGEAL 95
           F  +   Q+SIR  TTG  + +    Q ++LRLGH S LIS    QILQQ+PST +GE+L
Sbjct: 5   FGDSLSFQFSIRTNTTGTLASHEHPMQFVELRLGHSSHLISRSSRQILQQSPSTPLGESL 64

Query: 96  FPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIASVAAG--------GFSVE 155
           FP  LR+ E    FL ++ V+ FL SF+   +  D+I+++I+S A           F + 
Sbjct: 65  FPFILRDLEHP-PFLPNYHVLHFLSSFSIPVAACDIIYQEISSFALRLTADNVDLNFHIV 124

Query: 156 ADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVC 215
            D+D + M W++ +    EE         GAP  AIERL  QKFDG+     +E  CSVC
Sbjct: 125 VDVDAIEMIWVDLDPFLVEEYS--PPAMNGAPASAIERLQRQKFDGLR-EEEEEGDCSVC 184

Query: 216 YDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ 246
            + L     EE++++PCGHVYHK CIL WLQ SNSCP CR+KL+
Sbjct: 185 CEALR--GEEEVSRIPCGHVYHKCCILKWLQISNSCPLCRTKLE 222

[Close]

BLAST of Lcy11g012670 vs. ExPASy TrEMBL
Match: A0A6J1KYV1 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499496 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34
Identity = 99/217 (45.62%), Postives = 136/217 (62.67%), Query Frame = 0


Query: 43  QYSIRTTGN---SSGN---QILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLRE 102
           Q SI++T N   +SG    Q+L+LRLGH + LIS    QILQQTPST +G+ALFP  LR+
Sbjct: 12  QCSIQSTCNGTVASGQQPIQLLELRLGHSTHLISRSSRQILQQTPSTPIGDALFPFVLRD 71

Query: 103 REEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----VAAG----GFSVEADIDYVM 162
            +    FL++  V++FL SF+   +  D+I+E+I+S    +AAG     F +  ++D   
Sbjct: 72  LQHP-PFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNMDLNFHIVVEVDVNE 131

Query: 163 MFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESG 222
           M W++ +    EE    E    GAP  AIERL  QKFDG+     +E  CSVC + L+  
Sbjct: 132 MIWVDLDPFLVEEYSPAEM--NGAPASAIERLQRQKFDGLR-EEEEEGDCSVCCEALK-- 191

Query: 223 NGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ 246
             EE++++PCGHVYHK CIL WLQ SNSCP CR+KL+
Sbjct: 192 GEEEVSRIPCGHVYHKFCILKWLQMSNSCPLCRTKLE 222

[Close]

BLAST of Lcy11g012670 vs. ExPASy TrEMBL
Match: A0A6J1G7Z5 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC111451666 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 7.7e-34
Identity = 95/217 (43.78%), Postives = 135/217 (62.21%), Query Frame = 0


Query: 43  QYSIRTTGNSS------GNQILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLRE 102
           Q SI++T N +        Q+L+LRLG+ + LIS    QILQQTP+T MG+ALFP  LR+
Sbjct: 12  QCSIQSTCNGTVASDQQPMQLLELRLGNSTHLISRSSRQILQQTPTTPMGDALFPFVLRD 71

Query: 103 REEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----VAAG----GFSVEADIDYVM 162
            +    FL++  V++FL SF+   +  D+I+E+I+S    +AAG     F +  ++D + 
Sbjct: 72  LQHP-PFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNVDLNFHIVVEVDVIE 131

Query: 163 MFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESG 222
           M W++ +    EE    E    GAP  AIERL  Q+FDG+     +E  CSVC + L+  
Sbjct: 132 MIWVDLDPFLVEEYSPAEM--NGAPASAIERLQRQEFDGLR-EEEEEGDCSVCCEALK-- 191

Query: 223 NGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ 246
             EE++++PCGHVYHK CIL WLQ SNSCP CR+KL+
Sbjct: 192 GEEEVSRIPCGHVYHKCCILKWLQMSNSCPLCRTKLE 222

[Close]

BLAST of Lcy11g012670 vs. ExPASy TrEMBL
Match: A0A6J1G809 (probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC111451600 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.9e-33
Identity = 100/226 (44.25%), Postives = 132/226 (58.41%), Query Frame = 0


Query: 36  FSTNSCLQYSIRTTGNSSGN--------QILKLRLGHCSRLISGFPHQILQQTPSTLMGE 95
           F  +   Q S RT  NS+G         Q ++LRLGH S LIS    QILQQTPST MG+
Sbjct: 5   FGDSLSFQCSFRT--NSTGTLASHEQPMQFVELRLGHSSHLISRSSRQILQQTPSTPMGD 64

Query: 96  ALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----VAAG----GFS 155
           ALFP  LR+      FL+   V+ FL SF+   +V ++IF +I+S    +AAG     F 
Sbjct: 65  ALFPFILRDLLHP-PFLSKSHVLRFLSSFSIPIAVCNIIFVEISSFALHLAAGNVDLNFH 124

Query: 156 VEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCS 215
           +  D+D + M W++ +    EE         GAP  AIERL  Q+FD  G+   +E  CS
Sbjct: 125 IVVDVDAIEMIWVDLDPFLIEEYS--PPAMNGAPASAIERLQRQEFD--GLREEEEGECS 184

Query: 216 VCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ 246
           VC + L+    EE++++PCGHVYHK CIL WLQ SNSCP CR+KL+
Sbjct: 185 VCCEALK--GEEEVSRIPCGHVYHKCCILRWLQMSNSCPLCRTKLE 221

[Close]

BLAST of Lcy11g012670 vs. NCBI nr
Match: XP_023539480.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-40
Identity = 99/214 (46.26%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 55  NQILKLRLGHCSRLI-----SGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRV 114
           +Q+L++R+GH SRL+     SG+P  I+ +T  T M +A FPL LRE E+ +   A+ + 
Sbjct: 20  DQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQFPLPLRELEDPLFCQAYIK- 79

Query: 115 VEFLCSFNFRSSVGDVIFEKIAS----VAAGG----FSVEADIDYVMMFWMEGEGIGEEE 174
            EFL S+N  +++ + I  +IAS    +A G     F + A+IDY+ MFWM+      EE
Sbjct: 80  -EFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEIDYIQMFWMDDSATAAEE 139

Query: 175 IPMVEE---------GGRGAPEWAIERLMEQKFDGIGIGIGKE-DSCSVCYDELESGNGE 234
               EE         G RGAPE AIERL ++KFDG G   G++  +CSVCYDE++ G GE
Sbjct: 140 EEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFG---GEDLGNCSVCYDEMKDG-GE 199

Query: 235 EMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ 246
           E++++PCGHVYHK C+LTWLQR+NSCP CR+KL+
Sbjct: 200 EVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLE 227

[Close]

BLAST of Lcy11g012670 vs. NCBI nr
Match: XP_023539471.1 (uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-37
Identity = 97/226 (42.92%), Postives = 138/226 (61.06%), Query Frame = 0


Query: 55  NQILKLRLGHCSRLI-----SGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRV 114
           +Q+L++R+ H +RL+     SG+P  I+ +T  T M +A FPL LRE E+ +   A+  +
Sbjct: 20  DQLLQIRIRHSTRLLTGSPFSGYPFNIVHETLPTTMADAQFPLPLRELEDPLFCQAY--I 79

Query: 115 VEFLCSFNFRSSVGDVIFEKIAS----VAAGG----FSVEADIDYVMMFWMEGEGIGEEE 174
            EFL S+N  +++ + I  +IAS    +A G     F + A+IDY+ MFW++   I  EE
Sbjct: 80  EEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEIDYIQMFWLDQSAIAAEE 139

Query: 175 IPMVEE---------------------GGRGAPEWAIERLMEQKFDGIGIGIGKE-DSCS 234
               EE                     G RGAPE AIERL ++KFDG G   G++  +CS
Sbjct: 140 EEEEEEDEEEEEDEEEEEEEVIFDNFSGRRGAPETAIERLKKEKFDGFG---GEDLGNCS 199

Query: 235 VCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ 246
           VCYDE++ G GEE++++PCGHVYHK C+LTWLQR+NSCP CR KL+
Sbjct: 200 VCYDEMKDG-GEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRKKLE 239

[Close]

BLAST of Lcy11g012670 vs. NCBI nr
Match: XP_022947841.1 (NEP1-interacting protein-like 1 [Cucurbita moschata])

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-36
Identity = 103/230 (44.78%), Postives = 132/230 (57.39%), Query Frame = 0


Query: 36  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALF 95
           F+  S L+YS+R   N   +Q+L+LRLG+ SRLIS     G P+ IL++TPST M +ALF
Sbjct: 3   FANASTLRYSLRR--NHGADQLLQLRLGYSSRLISRSPSAGLPYDILEETPSTPMADALF 62

Query: 96  PLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIASVAA--------GGFSVEA 155
           PL LRE E+ +    H  +VE + SFN  S   + I +KI S             F + A
Sbjct: 63  PLPLRELEDPL--FCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQWAAVDYDAKFQLVA 122

Query: 156 DIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKED 215
           DIDY+ MFWME      G G+  EE  ++EE G  A E                GIG E+
Sbjct: 123 DIDYIQMFWMEKHRGSVGRGVMVEERVVLEETGVAAAEKQ--------------GIGGEE 182

Query: 216 SCSVCYD--ELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
            CSVCY+  E E G  +E+ K+PCGH +HK CILTW QRSNSCP CR+KL
Sbjct: 183 -CSVCYESYEAEKGGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRAKL 213

[Close]

BLAST of Lcy11g012670 vs. NCBI nr
Match: KAG6605222.1 (E3 ubiquitin-protein ligase AMFR, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-36
Identity = 103/230 (44.78%), Postives = 132/230 (57.39%), Query Frame = 0


Query: 36  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALF 95
           F+  S L+YS+R   N   +Q+L+LRLG+ SRLIS     G P+ IL++TPST M +ALF
Sbjct: 3   FANASTLRYSLRR--NHGADQLLQLRLGYSSRLISRSPSAGLPYDILEETPSTPMADALF 62

Query: 96  PLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIASVAA--------GGFSVEA 155
           PL LRE E+ +    H  +VE + SFN  S   + I +KI S             F + A
Sbjct: 63  PLPLRELEDPL--FCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQWAAVDYDAKFQLVA 122

Query: 156 DIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKED 215
           DIDY+ MFWME      G G+  EE  ++EE G  A E                GIG E+
Sbjct: 123 DIDYIQMFWMEKRGGSVGRGVMVEERVVLEETGVAAAEKQ--------------GIGGEE 182

Query: 216 SCSVCYD--ELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
            CSVCY+  E E G  +E+ K+PCGH +HK CILTW QRSNSCP CR+KL
Sbjct: 183 -CSVCYESYEAEKGGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRAKL 213

[Close]

BLAST of Lcy11g012670 vs. NCBI nr
Match: XP_038876917.1 (E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-35
Identity = 109/240 (45.42%), Postives = 137/240 (57.08%), Query Frame = 0


Query: 36  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLISG------FPHQILQQTPSTLMGEAL 95
           FST S + Y    T NS  +Q+L++R G CSRLIS        P +ILQQT ST +GEAL
Sbjct: 3   FSTTSSIAYYFHGTPNS--DQVLQVRFGVCSRLISRSPSPGIIPDRILQQTRSTPIGEAL 62

Query: 96  FPLC-LREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIASVAA------GGFSVEA 155
           FP   +R+  EE      F V  FL SFN  SSV  ++  KI S A       G F +EA
Sbjct: 63  FPFTNVRDVGEEA--AVEFLVNGFLRSFNLHSSVCQMMSRKILSFAQQFDANNGSFKIEA 122

Query: 156 DIDYVMMFWMEGEG-------IGEEEIPMVEEGG------RGAPEWAIERLMEQKFDGIG 215
           +IDY+  FWME          IGEE   +  E G       GAPE AIER+ +QKFDG  
Sbjct: 123 NIDYMKEFWMEAVSWLHPNSIIGEEGFEINFEEGPPPARRAGAPESAIERVRKQKFDGF- 182

Query: 216 IGIGKED----SCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ 246
               KE+     C VC ++L+   G E++++PCGHVYHK CILTWL+RSN+CP CR  L+
Sbjct: 183 ----KEEEETGECCVCCEDLKR-KGMEVSRIPCGHVYHKSCILTWLERSNTCPLCRRSLE 232

[Close]

BLAST of Lcy11g012670 vs. TAIR 10
Match: AT4G12210.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-11
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 196 DSCSVCYDELESG-NGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           +SCS+C + L SG    ++T+M C HV+H PC+L W  R N+CP CR++L
Sbjct: 151 ESCSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTCPLCRTEL 200

[Close]

BLAST of Lcy11g012670 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-10
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 195 EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           + +C VC DE E G+  E  +MPC H+YH  CI+ WL + NSCP CR +L
Sbjct: 187 DSNCPVCKDEFELGS--EAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

[Close]

BLAST of Lcy11g012670 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-10
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 195 EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           + +C VC DE E G+  E  +MPC H+YH  CI+ WL + NSCP CR +L
Sbjct: 187 DSNCPVCKDEFELGS--EAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

[Close]

BLAST of Lcy11g012670 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-10
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 195 EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           + +C VC DE E G+  E  +MPC H+YH  CI+ WL + NSCP CR +L
Sbjct: 187 DSNCPVCKDEFELGS--EAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

[Close]

BLAST of Lcy11g012670 vs. TAIR 10
Match: AT3G10815.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-10
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 192 IGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL 245
           +G +  C VC D+ E G+  +  KMPC H+YH  CIL WL + N+CP CR +L
Sbjct: 115 LGLDPYCPVCQDQFEIGS--DARKMPCKHIYHSECILPWLVQRNTCPVCRKEL 165

The following BLAST results are available for this feature:

BLAST of Lcy11g012670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	3.7e-09	51.02	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22197	6.3e-09	50.00	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q8LPN7	8.3e-09	48.98	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9Y7K6	2.4e-08	39.58	Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai...	[more]
Q8NG27	3.1e-08	46.00	E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens OX=9606 GN=PJA1 PE=1 SV=2	[more]

BLAST of Lcy11g012670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7L1	7.5e-37	44.78	NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE...	[more]
A0A6J1L387	1.6e-34	43.30	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499493 PE...	[more]
A0A6J1KYV1	1.6e-34	45.62	E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]
A0A6J1G7Z5	7.7e-34	43.78	E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1G809	2.9e-33	44.25	probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Lcy11g012670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539480.1	3.0e-40	46.26	E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]	[more]
XP_023539471.1	1.4e-37	42.92	uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo]	[more]
XP_022947841.1	1.5e-36	44.78	NEP1-interacting protein-like 1 [Cucurbita moschata]	[more]
KAG6605222.1	1.5e-36	44.78	E3 ubiquitin-protein ligase AMFR, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_038876917.1	1.7e-35	45.42	E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ub...	[more]

BLAST of Lcy11g012670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12210.1	6.9e-11	48.00	RING/U-box superfamily protein	[more]
AT2G40830.2	4.5e-10	50.00	RING-H2 finger C1A	[more]
AT2G40830.1	4.5e-10	50.00	RING-H2 finger C1A	[more]
AT2G40830.3	4.5e-10	50.00	RING-H2 finger C1A	[more]
AT3G10815.1	4.5e-10	47.17	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 198..240 e-value: 1.5E-7 score: 41.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 196..241 e-value: 8.4E-14 score: 51.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 198..241 score: 13.035139
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 164..245 e-value: 8.2E-19 score: 69.1
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 166..245
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 166..245
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 193..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g012670.1	Lcy11g012670.1	mRNA