Lcy11g012570 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g012570
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Location	Chr11: 18191948 .. 18192855 (+)
RNA-Seq Expression	Lcy11g012570
Synteny	Lcy11g012570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGCTCATCCACTCTGTTTCTCTCTAGCGCTCTGCTTCATCACAACGTTCGACTCTGCCATGGCTTCCTCACACCTCCATCTCCTCTCTACCCCAAACCCTCTTCTTCTCCGTCAATCTCAGCCCACTTTCACAAACCCATTACAACTTACATCGAAACGGCACCTCTCAATCAAATGCAGCTCACAAGACTCCGAATCGGACCCCAACTTCCCATCCCCAGATCCGAAATTCAGCGCCTTAAACGAGCCAGAGAGCTTCCCAATCGAGAAGCGAAGAAGATCCGAAATAGTCCGCCAAAGAAGACCCACAAAGGAAATCGCAAAGCCGGAGCCGCCAAACTTCGAAATCGGGTGGACAAGGACGAAAGAGATCAATTTGGAGAAGCCGATCGGGTGGATGATAATGGACTTTCTAGAGAAGCTTGAAGGGCTAATGGAGAGAGAATTTGGGTCGACGGAGTTACTGGCCAAAGTGGGAGAGATTGTGGCGGAGAGGGCCAGAGAGGAGGCCGAGATCTTGCGAGACGATGGCAAAGTGGATGACAGAATGGTTACTGAGTTGTTTAGAGTTTTGAAGTTGATGGAGATGGATTTGGCTATGGTGAAGGCCGCTGTGAAGGATGAGACCTTGAGTGAGCGGCTTGGGCAGGCCAAAGCTAGGTGCAGGCAAGCTATACTTGTTGCTAATTCTTTCTGAAAAGCAAATGGGTTGGGGGCAATGTTGAAAGTGGAGGCTAAGGTTAGGAGGTGGGTGTTTTTCTTGGTTCATTCATTTGTGCTTTTTGTTAAGCGCCTTTTTTGTGATCATACTTTGGCAGTGTTTGTGCATAATATTATTTGTTTTTGCTTGTGAATATGTAGAGGGAAATTTGTGTTTTGTGTAGTGTAGTGCCACTTGAGAGATG

mRNA sequence

ATAAGCTCATCCACTCTGTTTCTCTCTAGCGCTCTGCTTCATCACAACGTTCGACTCTGCCATGGCTTCCTCACACCTCCATCTCCTCTCTACCCCAAACCCTCTTCTTCTCCGTCAATCTCAGCCCACTTTCACAAACCCATTACAACTTACATCGAAACGGCACCTCTCAATCAAATGCAGCTCACAAGACTCCGAATCGGACCCCAACTTCCCATCCCCAGATCCGAAATTCAGCGCCTTAAACGAGCCAGAGAGCTTCCCAATCGAGAAGCGAAGAAGATCCGAAATAGTCCGCCAAAGAAGACCCACAAAGGAAATCGCAAAGCCGGAGCCGCCAAACTTCGAAATCGGGTGGACAAGGACGAAAGAGATCAATTTGGAGAAGCCGATCGGGTGGATGATAATGGACTTTCTAGAGAAGCTTGAAGGGCTAATGGAGAGAGAATTTGGGTCGACGGAGTTACTGGCCAAAGTGGGAGAGATTGTGGCGGAGAGGGCCAGAGAGGAGGCCGAGATCTTGCGAGACGATGGCAAAGTGGATGACAGAATGGTTACTGAGTTGTTTAGAGTTTTGAAGTTGATGGAGATGGATTTGGCTATGGTGAAGGCCGCTGTGAAGGATGAGACCTTGAGTGAGCGGCTTGGGCAGGCCAAAGCTAGGTGCAGGCAAGCTATACTTGTTGCTAATTCTTTCTGAAAAGCAAATGGGTTGGGGGCAATGTTGAAAGTGGAGGCTAAGGTTAGGAGGTGGGTGTTTTTCTTGGTTCATTCATTTGTGCTTTTTGTTAAGCGCCTTTTTTGTGATCATACTTTGGCAGTGTTTGTGCATAATATTATTTGTTTTTGCTTGTGAATATGTAGAGGGAAATTTGTGTTTTGTGTAGTGTAGTGCCACTTGAGAGATG

Coding sequence (CDS)

ATGGCTTCCTCACACCTCCATCTCCTCTCTACCCCAAACCCTCTTCTTCTCCGTCAATCTCAGCCCACTTTCACAAACCCATTACAACTTACATCGAAACGGCACCTCTCAATCAAATGCAGCTCACAAGACTCCGAATCGGACCCCAACTTCCCATCCCCAGATCCGAAATTCAGCGCCTTAAACGAGCCAGAGAGCTTCCCAATCGAGAAGCGAAGAAGATCCGAAATAGTCCGCCAAAGAAGACCCACAAAGGAAATCGCAAAGCCGGAGCCGCCAAACTTCGAAATCGGGTGGACAAGGACGAAAGAGATCAATTTGGAGAAGCCGATCGGGTGGATGATAATGGACTTTCTAGAGAAGCTTGAAGGGCTAATGGAGAGAGAATTTGGGTCGACGGAGTTACTGGCCAAAGTGGGAGAGATTGTGGCGGAGAGGGCCAGAGAGGAGGCCGAGATCTTGCGAGACGATGGCAAAGTGGATGACAGAATGGTTACTGAGTTGTTTAGAGTTTTGAAGTTGATGGAGATGGATTTGGCTATGGTGAAGGCCGCTGTGAAGGATGAGACCTTGAGTGAGCGGCTTGGGCAGGCCAAAGCTAGGTGCAGGCAAGCTATACTTGTTGCTAATTCTTTCTGA

Protein sequence

MASSHLHLLSTPNPLLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF

Homology

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BLAST of Lcy11g012570 vs. ExPASy TrEMBL
Match: A0A5D3C0F1 (Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00480 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.9e-99
Identity = 195/213 (91.55%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIK +SQDSESDPNFPSPDPKFS
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFS 60

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PE+FPIEKRRRSEI+RQR+PT EIAKPEPPNFEIGW RTKEINLEKPIGWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]

BLAST of Lcy11g012570 vs. ExPASy TrEMBL
Match: A0A1S3BT06 (uncharacterized protein LOC103493403 OS=Cucumis melo OX=3656 GN=LOC103493403 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98
Identity = 194/213 (91.08%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIK +SQDSESDPNFPSPDP FS
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PE+FPIEKRRRSEI+RQR+PT EIAKPEPPNFEIGW RTKEINLEKPIGWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]

BLAST of Lcy11g012570 vs. ExPASy TrEMBL
Match: A0A0A0L6D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081380 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.9e-97
Identity = 190/213 (89.20%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIKC+SQDSESDPNFPSPDP F 
Sbjct: 20  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKCNSQDSESDPNFPSPDPNFG 79

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PE+FPIEKRRRS+I+RQR+P+ EIAKPEPPNFEIGW RTKEI++EKPIGWMIMDFL
Sbjct: 80  ALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISVEKPIGWMIMDFL 139

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDL
Sbjct: 140 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 199

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 200 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 232

[Close]

BLAST of Lcy11g012570 vs. ExPASy TrEMBL
Match: A0A6J1EVI2 (uncharacterized protein LOC111438454 OS=Cucurbita moschata OX=3662 GN=LOC111438454 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 8.9e-95
Identity = 187/213 (87.79%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MA  HLHLL  PNP LLL +SQPTFTNPLQ+T KR LS+KCSS+ SESDPNFPSP+P F 
Sbjct: 1   MACLHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPNPDFG 60

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PESFPIEKRRRSEIVRQRRP+K+I KPEPPNFEIGW RTKEINLEKP+GWMIMDFL
Sbjct: 61  ALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDL
Sbjct: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLAQAKARCRQAILVANSF 213

[Close]

BLAST of Lcy11g012570 vs. ExPASy TrEMBL
Match: A0A6J1JD53 (uncharacterized protein LOC111483306 OS=Cucurbita maxima OX=3661 GN=LOC111483306 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 185/213 (86.85%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MA  HLH+L  PNP LLL QSQPTFTNPLQ+T KR LS+KCSS+ SESDPNFPSPDP F 
Sbjct: 1   MACLHLHILCAPNPLLLLPQSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPDPDFG 60

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PESFP+EKRRRSEIVRQRRP+KEI KPEPPNFEIGW RTKEINLEKP+GWMIMDFL
Sbjct: 61  ALNQPESFPVEKRRRSEIVRQRRPSKEIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDL
Sbjct: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAV+DETL++RL QAKARCRQAILVANSF
Sbjct: 181 AMVKAAVQDETLTQRLAQAKARCRQAILVANSF 213

[Close]

BLAST of Lcy11g012570 vs. NCBI nr
Match: KAA0025435.1 (Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa] >TYK04748.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa])

HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98
Identity = 195/213 (91.55%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIK +SQDSESDPNFPSPDPKFS
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFS 60

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PE+FPIEKRRRSEI+RQR+PT EIAKPEPPNFEIGW RTKEINLEKPIGWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]

BLAST of Lcy11g012570 vs. NCBI nr
Match: XP_008452345.1 (PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 4.7e-98
Identity = 194/213 (91.08%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIK +SQDSESDPNFPSPDP FS
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PE+FPIEKRRRSEI+RQR+PT EIAKPEPPNFEIGW RTKEINLEKPIGWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]

BLAST of Lcy11g012570 vs. NCBI nr
Match: XP_004152910.2 (uncharacterized protein LOC101210146 [Cucumis sativus] >KGN56162.1 hypothetical protein Csa_011377 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 3.9e-97
Identity = 190/213 (89.20%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIKC+SQDSESDPNFPSPDP F 
Sbjct: 20  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKCNSQDSESDPNFPSPDPNFG 79

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PE+FPIEKRRRS+I+RQR+P+ EIAKPEPPNFEIGW RTKEI++EKPIGWMIMDFL
Sbjct: 80  ALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISVEKPIGWMIMDFL 139

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDL
Sbjct: 140 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 199

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 200 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 232

[Close]

BLAST of Lcy11g012570 vs. NCBI nr
Match: XP_022932131.1 (uncharacterized protein LOC111438454 [Cucurbita moschata] >KAG6577442.1 hypothetical protein SDJN03_25016, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015514.1 hypothetical protein SDJN02_23150, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356.3 bits (913), Expect = 1.8e-94
Identity = 187/213 (87.79%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MA  HLHLL  PNP LLL +SQPTFTNPLQ+T KR LS+KCSS+ SESDPNFPSP+P F 
Sbjct: 1   MACLHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPNPDFG 60

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PESFPIEKRRRSEIVRQRRP+K+I KPEPPNFEIGW RTKEINLEKP+GWMIMDFL
Sbjct: 61  ALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDL
Sbjct: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLAQAKARCRQAILVANSF 213

[Close]

BLAST of Lcy11g012570 vs. NCBI nr
Match: XP_022985263.1 (uncharacterized protein LOC111483306 [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-94
Identity = 185/213 (86.85%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFS 60
           MA  HLH+L  PNP LLL QSQPTFTNPLQ+T KR LS+KCSS+ SESDPNFPSPDP F 
Sbjct: 1   MACLHLHILCAPNPLLLLPQSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPDPDFG 60

Query: 61  ALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDFL 120
           ALN+PESFP+EKRRRSEIVRQRRP+KEI KPEPPNFEIGW RTKEINLEKP+GWMIMDFL
Sbjct: 61  ALNQPESFPVEKRRRSEIVRQRRPSKEIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDL
Sbjct: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           AMVKAAV+DETL++RL QAKARCRQAILVANSF
Sbjct: 181 AMVKAAVQDETLTQRLAQAKARCRQAILVANSF 213

[Close]

BLAST of Lcy11g012570 vs. TAIR 10
Match: AT1G51100.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-61
Identity = 140/214 (65.42%), Postives = 161/214 (75.23%), Query Frame = 0


Query: 1   MASSHLHLLSTPNPLLLRQSQPTFTNP-LQLTSKRHLSIKCSSQDSESDPNFP-SPDPKF 60
           MAS+   LL + +   L  + P  TN  ++ T+K   S KCSS     D     +P P+ 
Sbjct: 1   MASTSTLLLPSLSSKNLHIAVPIRTNSFVRRTTK--FSTKCSSNPESKDQFINLTPAPES 60

Query: 61  SALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKPIGWMIMDF 120
                 E FPIEKRRRSEI+R  R  + I KPEPPNFEIGW RTKEINLEKP G++IMDF
Sbjct: 61  INTTSAEKFPIEKRRRSEIIRD-RTQRGIEKPEPPNFEIGWKRTKEINLEKPKGYVIMDF 120

Query: 121 LEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMD 180
           LEK E LM REFGS ELLAK GEIVAERAREEAE+LRD+GKV++RMVTELFRVLKLMEMD
Sbjct: 121 LEKFEALMAREFGSKELLAKAGEIVAERAREEAEVLRDEGKVEERMVTELFRVLKLMEMD 180

Query: 181 LAMVKAAVKDETLSERLGQAKARCRQAILVANSF 213
           LAMVKA+VKDETLS+R+ QA+ARCRQAILVANSF
Sbjct: 181 LAMVKASVKDETLSQRIEQARARCRQAILVANSF 211

The following BLAST results are available for this feature:

BLAST of Lcy11g012570 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g012570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0F1	5.9e-99	91.55	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 O...	[more]
A0A1S3BT06	2.3e-98	91.08	uncharacterized protein LOC103493403 OS=Cucumis melo OX=3656 GN=LOC103493403 PE=...	[more]
A0A0A0L6D8	1.9e-97	89.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081380 PE=4 SV=1	[more]
A0A6J1EVI2	8.9e-95	87.79	uncharacterized protein LOC111438454 OS=Cucurbita moschata OX=3662 GN=LOC1114384...	[more]
A0A6J1JD53	1.2e-94	86.85	uncharacterized protein LOC111483306 OS=Cucurbita maxima OX=3661 GN=LOC111483306...	[more]

BLAST of Lcy11g012570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025435.1	1.2e-98	91.55	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [...	[more]
XP_008452345.1	4.7e-98	91.08	PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]	[more]
XP_004152910.2	3.9e-97	89.20	uncharacterized protein LOC101210146 [Cucumis sativus] >KGN56162.1 hypothetical ...	[more]
XP_022932131.1	1.8e-94	87.79	uncharacterized protein LOC111438454 [Cucurbita moschata] >KAG6577442.1 hypothet...	[more]
XP_022985263.1	2.4e-94	86.85	uncharacterized protein LOC111483306 [Cucurbita maxima]	[more]

BLAST of Lcy11g012570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51100.1	1.3e-61	65.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..83
None	No IPR available	PANTHER	PTHR36719	OS01G0676200 PROTEIN	coord: 1..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g012570.1	Lcy11g012570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
cellular_component	GO:0009570	chloroplast stroma