Lcy11g012050 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g012050
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Calcium-binding EF-hand family protein
Location	Chr11: 15178936 .. 15179935 (-)
RNA-Seq Expression	Lcy11g012050
Synteny	Lcy11g012050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGACATATGCCAGACCAATAATCGACCGTGTATTTATATATTTGTAGTATCCGTACTCACAAAAATATATATATAAAAAATCCAGAACGGCAGAACAGAATACCAATGGCATCTTTCTGGATAAAATGACGATTATACCCCTGCAACGCGCCTTCTTCGAAATCACACAACCTGCAAATCTGAATCAGCGTAACCAATCTACATTATTATCTGTACCTTAGTTGGCGCCCATGGCCGCTCCTTCTCCGAAAACTCCATTGACCTTCTTCTTCTTCACTCTTCCCCCATATATATCCCCCCATTCCACTTCTTCCTCTTACCCTCAAACTCAAGCCCCAATCCCTTATCCCTAATCCCCAATCTCAATCTCACTTTCTCACTCCAATGGCTTTTGTCGCGAACCAATCGGGATTCGAGGACTGGCTGCCGACGATGGCGCAGAGGCTCGGCGGCGAGGGCCTGATTGGGGAGCTTTGCAATGGGTTCAATCTTCTGATGGACAGAGAGAAGGGGGTCATCGATTTCGAGAGCCTGAAGAGGAACGCCGCGGCGCTAGGGCTGGCGGATCTGAGCGATGACGATCTCAGAGCGATGTTGAGGGAGGGGGATTTCGACGGCGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTGATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGAGGCTCTAGGCCAACAGTTTAAGGATTTTTGTTGAACTTTTTTTTCTTTTTTGTAATTAGTTACTGATTTTCTTGACTTGATTTGATTTAATGAAAAGAAAAGGGAAAATTCAAATTTTAACCATTTTCCAATCTCATTAAAAATGGAGCTTAGTATGTTTCCAAAAAAAAAAAATGGAGCTTAGTAAATTTTACCTGTGTTCAATTTCGGGTAAACTCAACCTAATTTTAAACCCCCCCAAATAGTAAGGTTAGATTATAAAAAATACACGTGAATTTAGGGTTCGTTTTAA

mRNA sequence

TAGACATATGCCAGACCAATAATCGACCGTGTATTTATATATTTGTAGTATCCGTACTCACAAAAATATATATATAAAAAATCCAGAACGGCAGAACAGAATACCAATGGCATCTTTCTGGATAAAATGACGATTATACCCCTGCAACGCGCCTTCTTCGAAATCACACAACCTGCAAATCTGAATCAGCGTAACCAATCTACATTATTATCTGTACCTTAGTTGGCGCCCATGGCCGCTCCTTCTCCGAAAACTCCATTGACCTTCTTCTTCTTCACTCTTCCCCCATATATATCCCCCCATTCCACTTCTTCCTCTTACCCTCAAACTCAAGCCCCAATCCCTTATCCCTAATCCCCAATCTCAATCTCACTTTCTCACTCCAATGGCTTTTGTCGCGAACCAATCGGGATTCGAGGACTGGCTGCCGACGATGGCGCAGAGGCTCGGCGGCGAGGGCCTGATTGGGGAGCTTTGCAATGGGTTCAATCTTCTGATGGACAGAGAGAAGGGGGTCATCGATTTCGAGAGCCTGAAGAGGAACGCCGCGGCGCTAGGGCTGGCGGATCTGAGCGATGACGATCTCAGAGCGATGTTGAGGGAGGGGGATTTCGACGGCGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTGATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGAGGCTCTAGGCCAACAGTTTAAGGATTTTTGTTGAACTTTTTTTTCTTTTTTGTAATTAGTTACTGATTTTCTTGACTTGATTTGATTTAATGAAAAGAAAAGGGAAAATTCAAATTTTAACCATTTTCCAATCTCATTAAAAATGGAGCTTAGTATGTTTCCAAAAAAAAAAAATGGAGCTTAGTAAATTTTACCTGTGTTCAATTTCGGGTAAACTCAACCTAATTTTAAACCCCCCCAAATAGTAAGGTTAGATTATAAAAAATACACGTGAATTTAGGGTTCGTTTTAA

Coding sequence (CDS)

ATGGCTTTTGTCGCGAACCAATCGGGATTCGAGGACTGGCTGCCGACGATGGCGCAGAGGCTCGGCGGCGAGGGCCTGATTGGGGAGCTTTGCAATGGGTTCAATCTTCTGATGGACAGAGAGAAGGGGGTCATCGATTTCGAGAGCCTGAAGAGGAACGCCGCGGCGCTAGGGCTGGCGGATCTGAGCGATGACGATCTCAGAGCGATGTTGAGGGAGGGGGATTTCGACGGCGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTGATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGAGGCTCTAGGCCAACAGTTTAAGGATTTTTGTTGA

Protein sequence

MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC

Homology

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BLAST of Lcy11g012050 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38
Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 7   QSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAA-LGLADLSDD 66
           Q  F D+LPTMA  LGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGL DL+D+
Sbjct: 16  QPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDE 75

Query: 67  DLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQF 115
           D+R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S  L+ E + ++F
Sbjct: 76  DVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of Lcy11g012050 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.5e-35
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 10  FEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAA-ALGLADLSDDDLR 69
           F+D+ PTMA +LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGL DL+DDD+R
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 70  AMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQF 115
            M+ EGDFD DGALNQMEFCVLMFRLSPELM+ S  ++ E + ++F
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of Lcy11g012050 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 7   QSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDDD 66
           ++ +ED LP MA+++  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S +D
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 67  LRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQ 114
            + M+REGD DGDGALNQ EFCVLM RLSPE+M+++   LE+AL Q+
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of Lcy11g012050 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-10
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 10  FEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDDDLRA 69
           F D+L  M Q++  +    E+   F L  D E G I F++LKR A  LG  +LSD++L+ 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQE 145

Query: 70  MLREGDFDGDGALNQMEFCVLMFRLS 96
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of Lcy11g012050 vs. ExPASy Swiss-Prot
Match: Q9R1K9 (Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 10  FEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDDDLRA 69
           F D+L  M Q++  +    E+   F L  D E G I F++LKR A  LG  +L+D++L+ 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQE 145

Query: 70  MLREGDFDGDGALNQMEFCVLMFRLS 96
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of Lcy11g012050 vs. ExPASy TrEMBL
Match: A0A1S3BSY1 (calcium-binding protein PBP1 OS=Cucumis melo OX=3656 GN=LOC103493375 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.1e-57
Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A +SGFEDWLPTMA+RLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC 119
           DLSD+DLR+MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEAL Q+FKDFC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118

[Close]

BLAST of Lcy11g012050 vs. ExPASy TrEMBL
Match: A0A6J1EN05 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111435976 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 7.7e-56
Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAFVA+QSGFEDWLP MA+RLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC 119
           DLSD+DLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL Q+FK FC
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 118

[Close]

BLAST of Lcy11g012050 vs. ExPASy TrEMBL
Match: A0A0A0L347 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099590 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 107/118 (90.68%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A +SGFEDWLPTMA+RLGGEGLIGELCNGFNLLM+REKGVIDFESLKRNAAALGL 
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLG 60

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC 119
           DLSD+DLR+MLREGDFDGDGALNQMEFCVLMFRLSPELM+ESWFLLEEAL Q+FKDFC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDFC 118

[Close]

BLAST of Lcy11g012050 vs. ExPASy TrEMBL
Match: A0A6J1JAW3 (calcium-binding protein PBP1 OS=Cucurbita maxima OX=3661 GN=LOC111483314 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.2e-54
Identity = 106/117 (90.60%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAFVA+QSGFEDWLP MA+RLGGEGLIGELCNGFNLL DREKGVIDF SLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFSSLKRNAAALGLA 60

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDF 118
           DLSD+DLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL Q+FK F
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALSQEFKGF 117

[Close]

BLAST of Lcy11g012050 vs. ExPASy TrEMBL
Match: A0A6J1CM41 (calcium-binding protein PBP1 OS=Momordica charantia OX=3673 GN=LOC111012869 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 7   QSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDDD 66
           +SGF DWLPTMA RLGGEGLIGELC+GF+LLMDREKGVIDFESLKRNAAALGL DL+D+D
Sbjct: 11  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDED 70

Query: 67  LRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC 119
           LR MLREGDFDGDGALNQMEFCVLMFRLSPELMDES F L++AL  +F+DFC
Sbjct: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCLDQALTHEFRDFC 122

[Close]

BLAST of Lcy11g012050 vs. NCBI nr
Match: XP_038903612.1 (calcium-binding protein KRP1-like [Benincasa hispida])

HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57
Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A QSGF+DWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA
Sbjct: 29  MAFGAEQSGFQDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 88

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC 119
           DLSD+DLR+MLREGDFDGDGALNQMEFCVLMFRLSP+LMDESWFLLEEAL Q+FKDFC
Sbjct: 89  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFLLEEALNQEFKDFC 146

[Close]

BLAST of Lcy11g012050 vs. NCBI nr
Match: XP_008452312.1 (PREDICTED: calcium-binding protein PBP1 [Cucumis melo])

HSP 1 Score: 230.3 bits (586), Expect = 8.4e-57
Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A +SGFEDWLPTMA+RLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC 119
           DLSD+DLR+MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEAL Q+FKDFC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118

[Close]

BLAST of Lcy11g012050 vs. NCBI nr
Match: XP_022929391.1 (calcium-binding protein PBP1-like [Cucurbita moschata] >XP_023552392.1 calcium-binding protein PBP1 [Cucurbita pepo subsp. pepo] >KAG6577399.1 Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015477.1 Calcium-binding protein PBP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAFVA+QSGFEDWLP MA+RLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC 119
           DLSD+DLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL Q+FK FC
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 118

[Close]

BLAST of Lcy11g012050 vs. NCBI nr
Match: XP_004149304.1 (calcium-binding protein KRP1 [Cucumis sativus] >KGN56198.1 hypothetical protein Csa_010363 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55
Identity = 107/118 (90.68%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAF A +SGFEDWLPTMA+RLGGEGLIGELCNGFNLLM+REKGVIDFESLKRNAAALGL 
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLG 60

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC 119
           DLSD+DLR+MLREGDFDGDGALNQMEFCVLMFRLSPELM+ESWFLLEEAL Q+FKDFC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDFC 118

[Close]

BLAST of Lcy11g012050 vs. NCBI nr
Match: XP_022985275.1 (calcium-binding protein PBP1 [Cucurbita maxima])

HSP 1 Score: 220.3 bits (560), Expect = 8.7e-54
Identity = 106/117 (90.60%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60
           MAFVA+QSGFEDWLP MA+RLGGEGLIGELCNGFNLL DREKGVIDF SLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFSSLKRNAAALGLA 60

Query: 61  DLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDF 118
           DLSD+DLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL Q+FK F
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALSQEFKGF 117

[Close]

BLAST of Lcy11g012050 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 160.6 bits (405), Expect = 7.6e-40
Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 7   QSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAA-LGLADLSDD 66
           Q  F D+LPTMA  LGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGL DL+D+
Sbjct: 16  QPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDE 75

Query: 67  DLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQF 115
           D+R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S  L+ E + ++F
Sbjct: 76  DVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of Lcy11g012050 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 148.3 bits (373), Expect = 3.9e-36
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 10  FEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAA-ALGLADLSDDDLR 69
           F+D+ PTMA +LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGL DL+DDD+R
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 70  AMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQF 115
            M+ EGDFD DGALNQMEFCVLMFRLSPELM+ S  ++ E + ++F
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of Lcy11g012050 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-27
Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 7   QSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDDD 66
           ++ +ED LP MA+++  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S +D
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 67  LRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQ 114
            + M+REGD DGDGALNQ EFCVLM RLSPE+M+++   LE+AL Q+
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of Lcy11g012050 vs. TAIR 10
Match: AT4G37010.1 (centrin 2 )

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06
Identity = 31/93 (33.33%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 6   NQSG---FEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADL 65
           NQSG   F++++  M  + G    I EL   F ++     G I    +K  A  LG  + 
Sbjct: 74  NQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELG-ENF 133

Query: 66  SDDDLRAMLREGDFDGDGALNQMEFCVLMFRLS 96
           +D+D+  M+ E D D DG +N  EF  +M R S
Sbjct: 134 TDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTS 165

[Close]

BLAST of Lcy11g012050 vs. TAIR 10
Match: AT4G37010.2 (centrin 2 )

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06
Identity = 31/93 (33.33%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 6   NQSG---FEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADL 65
           NQSG   F++++  M  + G    I EL   F ++     G I    +K  A  LG  + 
Sbjct: 78  NQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELG-ENF 137

Query: 66  SDDDLRAMLREGDFDGDGALNQMEFCVLMFRLS 96
           +D+D+  M+ E D D DG +N  EF  +M R S
Sbjct: 138 TDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTS 169

The following BLAST results are available for this feature:

BLAST of Lcy11g012050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81831	1.1e-38	72.48	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9LSQ6	5.5e-35	66.98	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
Q9ZPX9	2.1e-26	52.34	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
Q2TBN3	8.0e-10	40.70	Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1	[more]
Q9R1K9	1.8e-09	39.53	Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1	[more]

BLAST of Lcy11g012050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BSY1	4.1e-57	93.22	calcium-binding protein PBP1 OS=Cucumis melo OX=3656 GN=LOC103493375 PE=4 SV=1	[more]
A0A6J1EN05	7.7e-56	91.53	calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111435976 ...	[more]
A0A0A0L347	1.3e-55	90.68	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099590 PE=...	[more]
A0A6J1JAW3	4.2e-54	90.60	calcium-binding protein PBP1 OS=Cucurbita maxima OX=3661 GN=LOC111483314 PE=4 SV...	[more]
A0A6J1CM41	2.0e-48	84.82	calcium-binding protein PBP1 OS=Momordica charantia OX=3673 GN=LOC111012869 PE=4...	[more]

BLAST of Lcy11g012050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903612.1	4.9e-57	93.22	calcium-binding protein KRP1-like [Benincasa hispida]	[more]
XP_008452312.1	8.4e-57	93.22	PREDICTED: calcium-binding protein PBP1 [Cucumis melo]	[more]
XP_022929391.1	1.6e-55	91.53	calcium-binding protein PBP1-like [Cucurbita moschata] >XP_023552392.1 calcium-b...	[more]
XP_004149304.1	2.7e-55	90.68	calcium-binding protein KRP1 [Cucumis sativus] >KGN56198.1 hypothetical protein ...	[more]
XP_022985275.1	8.7e-54	90.60	calcium-binding protein PBP1 [Cucurbita maxima]	[more]

BLAST of Lcy11g012050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27280.1	7.6e-40	72.48	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	3.9e-36	66.98	pinoid-binding protein 1	[more]
AT2G46600.1	1.5e-27	52.34	Calcium-binding EF-hand family protein	[more]
AT4G37010.1	2.5e-06	33.33	centrin 2	[more]
AT4G37010.2	2.5e-06	33.33	centrin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 66..94 e-value: 0.008 score: 25.4
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 41..93 e-value: 1.4E-20 score: 72.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 62..97 score: 10.859108
None	No IPR available	GENE3D	1.10.238.10		coord: 8..117 e-value: 2.1E-20 score: 74.7
None	No IPR available	PANTHER	PTHR47319:SF6	CALCIUM-BINDING PROTEIN KRP1	coord: 5..117
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 5..117
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 75..87
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 10..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g012050.1	Lcy11g012050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding