Lcy11g011030 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g011030
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr11: 13023920 .. 13028410 (-)
RNA-Seq Expression	Lcy11g011030
Synteny	Lcy11g011030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGGATTCTTCAAGATATAATCTCTGAGAATCAATCGGCTTTTGTCCCTGGGAGATCCGTTTTTGATAACATAATTATTGGGCATGAATGTCTTCATACCATTAAGTCACGACGTACTGGGCGTAAGGGATGGGTTGCATTAAAGTTAGATATGATCAAAGCGTATGACCGAGTTGAATGGTCATTTTTGAAACAGCTCAGGATTAAACTTGGTTTCAACCCTCGATGGGTAGATTTGCTTATGGATTGTATCACAACAGCGCGGTTTTCTGTCCTTATTAATAATAAGCCAACTGACACCATCATTCCTCAACGCGGGTTACGTCAAGGAGATCCACTCTCTTCTTATTTATTTTTACTCTGCTCTGAAGCTTTGTCCTCTTTATTAACTAAGGCTAATAGTAGAGGCGTTATGTCAGGTATGAAACCTAGTAAGCATTGTCCTGGGATCTCGCATTTGTTCTTTGCAGATGATAGCCTGATCTTCTGTCAAGCAACGACAGCACAAGTTACAGCTTTACGAACACTTTTACAAGTTTATGAGACAGCTTTAGGACAAGAAATTAACGTGACAAAATCAGCGATGTTCTTCTCTCCAAATGTGAGCAACGATGCTCGCATAGTGCTACAGAGCATCATGAGGATGCAAGTCGTAGATTCATTAGGGGCGTATCTGGGTGTCCCTTCTTCCTTTTTGAAAAATAAAAGAGAGGACTTTCAAGGGATCAAGCAGCGTGTTTGGCAAACATTACAAGGCTGGAAGGGGCGTTTCTTCTCCATGGGCGGGAAAGAGGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGAAACAAATTAATCGATCTCAATAAAGTGTTATTTGAGTAAATCAGTAATTTGGTTATTGAATAATCGAGTTTGCATTAATAAACCCTAAATCCAATAAACTAAGATCCAAGGTTGTTTAAATGAAACTTGGACTAGTATGTGGGGACATATGGGGATTAGTGTCCAAGTAACAACCTAAATGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGTCCATCTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGGGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTAGATGTAACGCCGTTAACTAGTTTAGGTTTGTATTTCAATAGGATGACCTAGGTAACTCAATCTCAATCCTGAGTCTGTTATGAACCCCTTTCAGGAGGGACTGTCCTTAGATTTGTATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGGTAAGTAGATGTGTGTTCCCTTAAGGGCTGATTCTAGGGCTTGAACAAAGGCGCGCCGTCCTCTCCTAGCCTGAGAGGAACTCCTGTTTAGTGGTTGGACCCTAAACAACTTGTTCATTAGAGGAATCAGTGGTACTTAAGGAACCAGAGGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGATTGACTTACTGCTTGGTCGATATCCGTGGACACAGAAATATTCTATAGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGTTGACTAAACTTGGTCAATGAGTTTGGCCAATTAGTCTTGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAGAGACTTGAGGCAATTAAGTATAAATTGTAAATTGAAAGTGTTCAATTTATTTGGGGAATCGTATAATGTATATTGATGCATTATAATATAAAGTTTATGAAACTTTATAATATAATTTTTGAATTAATTTAAAAAAAAAATTAATTCTTGAGAGAAAGTATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAAATTAATTAATTATGGAATTAATTAATTATTTATTAAAATTAGAGACCTTTTCCTATTAGGAAAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGAAATTAATTAATTATGGAATTAATTAATTATTTATTAAAATTAGAGACTTTTTCCTATTAGGAAAAGGTCTCCCTTTTCCTATTAGGAAAAAGGTCTTGGCCTTTACTATATATAGGACCCCTGGGGTGGGGTGAAAGGTATCCCATTCATTCTCCTACTCTCAGAGAATTCTCCCAAAGGCTCCCACAAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATATCGGTGTAGCCATAGTGGTGGTGTTCACACTAGTTCGTGATTAATTCACAAGCAGTTGGTGAATTTAATCTGAGTCGTCAACGAGAGTAAGTAATTTGTTACTTTATAAATTAGATTTAGATCTAATATTTTTGTATGCTTAGCCTTAATATAAATTTAGAATAGTTCTAATATTATTGCCCATGTATTGGTATTTTAGATTAAACAAAATTAATTACGAATCGGTCCCAATCACGCTTCCGCTTTACGGAATTACGGAATTCCAATCCTTCAAGAGGTTCTTATCAAAAGCGTGGCTCAAGCTATTCCTTCGTTCATCATGAGTTGTTTCAGATTGCCTAGCACACTCTGTGATGATATACATAGAATGATGGCAAGGTTCTGGTGGGGATCCACGGATACTAAAAAGAAAATTCATTGGAAGAAATGAGAATATTTATGTCTTCCAAAAGAAGCGGGTGGCCTAAATTTTCGTGATCTTGTGAGCTTTAACAAAGCTTTATTGGCAAAACAGATATGGAGGTTATTCACTAACCCAAGTCTTCTCGTGTCTAGAGTCATTCATGCCAAGTACGCACATGGACTTTCCTTATTATCTGCTCCTGTTAAATCAAATTGTTCTTTCTTTTGGAGAAGTTGTATTTGGGCTAGAAGATTGCTTCATCAGGGTATGTGCAAAATGGTGGGTAATGGCATGACCATAGATTTTTTTAAAGATCCCTGGATTCCCAAGGAATCTAAGTTTAGGCCAATTGCCAAAGACCATGTGCGAAATCATGAAAACAGGTTGGTGGCAGATTTTATCACACCATCAAATGAGTGGGATGTATCCATGCTGAGAGATTATGTATGGGAAGAGGATGTACGGTTAATAACTACTATTCTCATTAGCTCAGTAAATCTTGAAGATAAATGGATCTGGCATTACTCTAAAAATGGTAATTACTCTGTTAAGAGTGGTTATAAATTAGCCATGACTTTGTCTTCAATGGTCGGAGGGGAGTCAAGCACGAAAGCTATGAAAGGTTGGTGGAACGTTTTGTGGAAAACGCAACTGCCATCAAAGATTAAGCTCTTCATATGGAAAGCTTATCATGATTGTTTGCCAACCAATTATTGTTTATGGAAAAGGAAATTACTGACCACGTCTTGCTGTACCATGTGAAATTCAGAGATCGAGACGATTGATCACGCGTTATGCGGATGTATAAGAGCGAAGTCAATATGTGATTCACTATTCACTCGGATAGATACTCATATATTGGTTAGTAACAATTTTGCTGACCGCATCATTTTCCTAGCATCAAATTTGTTAACAAGTGAGTTTGAGAAAGCATGTATCGCTTTTTGGTCCATTTGGAATAACAGGAATTCGATCCGAGAAGCCAAGCCAGTTGTCGAGTGGTATCAACAGACTGAATAGATCATCAAATATTGGGAAGAAACAACTCACAAGAGAAGAGTAAGGCATGGTATCGATCCTAATCCTAATGAGCAAATCTTTATGTCAACTCCCAATTCCATTCAAGTGTGTATACCGATGCAGCGGTAAAGCCCAATCGTATAGGTGCGGGATTGGGTGTGTTTATTATGGGGGCGGGCGATACTATATATGGCGCAATGGAGATGGTTGAAAACATGGATTTAAGTCCAATGGCAGTTGAGGTTCAGGCAATTCTCCAGGCTCTTCGTCTTCTCCAACGTTTACAAATCCGCGAGGTTCGTATGTATTCTGACTCTATTAATGCCATCAGTATGATCAATAAGGATTTGGTAACGACAACAGATGTGGCTCATTGGATAGTCAATATTCAGGAGATGTGTAAGGAATTCCATGCTATTTCTTTCCATTATGTATTTCGAGATAGAAATTTAAGAGCCGATGCTTTAGCCAAACATGCTTTGGCTAACAATAGTACCATGTTGTGGTTATCAGATTTCCCGACATGGTTGTTGTCTATGGACAATGTTGCCCATTGCAAATGTACTGACGTATGTCTTTGTTCAAATTAA

mRNA sequence

ATGAAACGGATTCTTCAAGATATAATCTCTGAGAATCAATCGGCTTTTGTCCCTGGGAGATCCGTTTTTGATAACATAATTATTGGGCATGAATGTCTTCATACCATTAAGTCACGACGTACTGGGCGTAAGGGATGGGTTGCATTAAAGTTAGATATGATCAAAGCGTATGACCGAGTTGAATGGTCATTTTTGAAACAGCTCAGGATTAAACTTGGTTTCAACCCTCGATGGGTAGATTTGCTTATGGATTGTATCACAACAGCGCGGTTTTCTGTCCTTATTAATAATAAGCCAACTGACACCATCATTCCTCAACGCGGGTTACGTCAAGGAGATCCACTCTCTTCTTATTTATTTTTACTCTGCTCTGAAGCTTTGTCCTCTTTATTAACTAAGGCTAATAGTAGAGGCGTTATGTCAGGTATGAAACCTAGTAAGCATTGTCCTGGGATCTCGCATTTGTTCTTTGCAGATGATAGCCTGATCTTCTGTCAAGCAACGACAGCACAAGTTACAGCTTTACGAACACTTTTACAAGTTTATGAGACAGCTTTAGGACAAGAAATTAACGTGACAAAATCAGCGATGTTCTTCTCTCCAAATGTGAGCAACGATGCTCGCATAGTGCTACAGAGCATCATGAGGATGCAAGTCGTAGATTCATTAGGGGCCGTGGCTCAAGCTATTCCTTCGTTCATCATGAGTTGTTTCAGATTGCCTAGCACACTCTGTGATGATATACATAGAATGATGGCAAGAGTCATTCATGCCAAGTACGCACATGGACTTTCCTTATTATCTGCTCCTGTTAAATCAAATTGTTCTTTCTTTTGGAGAAGTTGTATTTGGGCTAGAAGATTGCTTCATCAGGGTATGTGCAAAATGGTGGGTAATGGCATGACCATAGATTTTTTTAAAGATCCCTGGATTCCCAAGGAATCTAAGTTTAGGCCAATTGCCAAAGACCATGTGCGAAATCATGAAAACAGGTTGGTGGCAGATTTTATCACACCATCAAATGAGTGGGATGTATCCATGCTGAGAGATTATGTATGGGAAGAGGATGTACGGTTAATAACTACTATTCTCATTAGCTCAGTAAATCTTGAAGATAAATGGATCTGGCATTACTCTAAAAATGGTAATTACTCTGTTAAGAGTGGTTATAAATTAGCCATGACTTTGTCTTCAATGGTCGGAGGGGAGTCAAGCACGAAAGCTATGAAAGCGGTAAAGCCCAATCGTATAGGTGCGGGATTGGGTGTGTTTATTATGGGGGCGGGCGATACTATATATGGCGCAATGGAGATGGTTGAAAACATGGATTTAAGTCCAATGGCAGTTGAGGTTCAGGCAATTCTCCAGGCTCTTCGTCTTCTCCAACGTTTACAAATCCGCGAGGTTCGTATGTATTCTGACTCTATTAATGCCATCAGTATGATCAATAAGGATTTGGTAACGACAACAGATGTGGCTCATTGGATAGTCAATATTCAGGAGATGTGTAAGGAATTCCATGCTATTTCTTTCCATTATGTATTTCGAGATAGAAATTTAAGAGCCGATGCTTTAGCCAAACATGCTTTGGCTAACAATAGTACCATGTTGTGGTTATCAGATTTCCCGACATGGTTGTTGTCTATGGACAATGTTGCCCATTGCAAATGTACTGACGTATGTCTTTGTTCAAATTAA

Coding sequence (CDS)

ATGAAACGGATTCTTCAAGATATAATCTCTGAGAATCAATCGGCTTTTGTCCCTGGGAGATCCGTTTTTGATAACATAATTATTGGGCATGAATGTCTTCATACCATTAAGTCACGACGTACTGGGCGTAAGGGATGGGTTGCATTAAAGTTAGATATGATCAAAGCGTATGACCGAGTTGAATGGTCATTTTTGAAACAGCTCAGGATTAAACTTGGTTTCAACCCTCGATGGGTAGATTTGCTTATGGATTGTATCACAACAGCGCGGTTTTCTGTCCTTATTAATAATAAGCCAACTGACACCATCATTCCTCAACGCGGGTTACGTCAAGGAGATCCACTCTCTTCTTATTTATTTTTACTCTGCTCTGAAGCTTTGTCCTCTTTATTAACTAAGGCTAATAGTAGAGGCGTTATGTCAGGTATGAAACCTAGTAAGCATTGTCCTGGGATCTCGCATTTGTTCTTTGCAGATGATAGCCTGATCTTCTGTCAAGCAACGACAGCACAAGTTACAGCTTTACGAACACTTTTACAAGTTTATGAGACAGCTTTAGGACAAGAAATTAACGTGACAAAATCAGCGATGTTCTTCTCTCCAAATGTGAGCAACGATGCTCGCATAGTGCTACAGAGCATCATGAGGATGCAAGTCGTAGATTCATTAGGGGCCGTGGCTCAAGCTATTCCTTCGTTCATCATGAGTTGTTTCAGATTGCCTAGCACACTCTGTGATGATATACATAGAATGATGGCAAGAGTCATTCATGCCAAGTACGCACATGGACTTTCCTTATTATCTGCTCCTGTTAAATCAAATTGTTCTTTCTTTTGGAGAAGTTGTATTTGGGCTAGAAGATTGCTTCATCAGGGTATGTGCAAAATGGTGGGTAATGGCATGACCATAGATTTTTTTAAAGATCCCTGGATTCCCAAGGAATCTAAGTTTAGGCCAATTGCCAAAGACCATGTGCGAAATCATGAAAACAGGTTGGTGGCAGATTTTATCACACCATCAAATGAGTGGGATGTATCCATGCTGAGAGATTATGTATGGGAAGAGGATGTACGGTTAATAACTACTATTCTCATTAGCTCAGTAAATCTTGAAGATAAATGGATCTGGCATTACTCTAAAAATGGTAATTACTCTGTTAAGAGTGGTTATAAATTAGCCATGACTTTGTCTTCAATGGTCGGAGGGGAGTCAAGCACGAAAGCTATGAAAGCGGTAAAGCCCAATCGTATAGGTGCGGGATTGGGTGTGTTTATTATGGGGGCGGGCGATACTATATATGGCGCAATGGAGATGGTTGAAAACATGGATTTAAGTCCAATGGCAGTTGAGGTTCAGGCAATTCTCCAGGCTCTTCGTCTTCTCCAACGTTTACAAATCCGCGAGGTTCGTATGTATTCTGACTCTATTAATGCCATCAGTATGATCAATAAGGATTTGGTAACGACAACAGATGTGGCTCATTGGATAGTCAATATTCAGGAGATGTGTAAGGAATTCCATGCTATTTCTTTCCATTATGTATTTCGAGATAGAAATTTAAGAGCCGATGCTTTAGCCAAACATGCTTTGGCTAACAATAGTACCATGTTGTGGTTATCAGATTTCCCGACATGGTTGTTGTCTATGGACAATGTTGCCCATTGCAAATGTACTGACGTATGTCTTTGTTCAAATTAA

Protein sequence

MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRVEWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLFLLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQVYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVVDSLGAVAQAIPSFIMSCFRLPSTLCDDIHRMMARVIHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKESKFRPIAKDHVRNHENRLVADFITPSNEWDVSMLRDYVWEEDVRLITTILISSVNLEDKWIWHYSKNGNYSVKSGYKLAMTLSSMVGGESSTKAMKAVKPNRIGAGLGVFIMGAGDTIYGAMEMVENMDLSPMAVEVQAILQALRLLQRLQIREVRMYSDSINAISMINKDLVTTTDVAHWIVNIQEMCKEFHAISFHYVFRDRNLRADALAKHALANNSTMLWLSDFPTWLLSMDNVAHCKCTDVCLCSN

Homology

[Close]

BLAST of Lcy11g011030 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.0e-14
Identity = 62/196 (31.63%), Postives = 95/196 (48.47%), Query Frame = 0


Query: 1   MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
           +K +L ++I  +QS  VPGR++FDN+ +  + LH   +RRTG      L LD  KA+DRV
Sbjct: 546 LKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHF--ARRTG-LSLAFLSLDQEKAFDRV 605

Query: 61  EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
           +  +L        F P++V  L     +A   V IN   T  +   RG+RQG PLS  L+
Sbjct: 606 DHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLY 665

Query: 121 LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
            L  E    LL K      ++G+   +    +    +ADD ++  Q     +   +   +
Sbjct: 666 SLAIEPFLCLLRKR-----LTGLVLKEPDMRVVLSAYADDVILVAQ-DLVDLERAQECQE 725

Query: 181 VYETALGQEINVTKSA 197
           VY  A    IN +KS+
Sbjct: 726 VYAAASSARINWSKSS 732

[Close]

BLAST of Lcy11g011030 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-13
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 94  LINNKPTDTIIPQRGLRQGDPLSSYLFLLCSEALSSLLTKANSRGVMSGMKPSKHCPGIS 153
           +IN  P   + P RGLRQGDPLS YLF+LC+E LS L  +A  +G + G++ S + P I+
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 154 HLFFADDS 162
           HL FADD+
Sbjct: 73  HLLFADDT 80

[Close]

BLAST of Lcy11g011030 vs. ExPASy Swiss-Prot
Match: Q05118 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.0e-10
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 0


Query: 34  HTIKSRRTGRKGWVALKLDMIKAYDRVEWSFLKQLRIKLGFNPRWVDLLMDCITTARFSV 93
           H IK RR   K +  + LD+ KA+D V    + +     G +    D +M  IT A  ++
Sbjct: 11  HYIKLRRLKGKTYNVVSLDIRKAFDTVSHPAILRAMRAFGIDDGMQDFIMSTITDAYTNI 70

Query: 94  LINNKPTDTIIPQRGLRQGDPLSSYLFLLCSEALSSLLTKANSRGVMSGMKPSKHCPGIS 153
           ++  + T+ I  + G++QGDPLS  LF +    L  L+T+ N     + M P+  C  I+
Sbjct: 71  VVGGRTTNKIYIRNGVKQGDPLSPVLFNI---VLDELVTRLNDEQPGASMTPA--CK-IA 130

Query: 154 HLFFADDSLIFCQATTAQVTALRTLLQVYETALGQEINVTKSAMFFSPNVS 205
            L FADD L+          +L T    + T  G  +N  K A   +  VS
Sbjct: 131 SLAFADDLLLLEDRDIDVPNSLATTCAYFRTR-GMTLNPEKCASISAATVS 174

[Close]

BLAST of Lcy11g011030 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 3.5e-10
Identity = 49/195 (25.13%), Postives = 92/195 (47.18%), Query Frame = 0


Query: 5   LQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRVEWSF 64
           ++ II  +Q  F+PG   + NI      +H I   +   K  + + LD  KA+D+++  F
Sbjct: 562 IKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKD--KNHMIISLDAEKAFDKIQHPF 621

Query: 65  LKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLFLLCS 124
           + ++  + G    +++++    +    ++ +N +  + I  + G RQG PLS YLF +  
Sbjct: 622 MIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVL 681

Query: 125 EALSSLLTKANS-RGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQVYE 184
           E L+  + +    +G+  G +  K    IS L  ADD +++          L  L+  + 
Sbjct: 682 EVLARAIRQQKEIKGIQIGKEEVK----ISLL--ADDMIVYISDPKNSTRELLNLINSFG 741

Query: 185 TALGQEINVTKSAMF 199
             +G +IN  KS  F
Sbjct: 742 EVVGYKINSNKSMAF 748

[Close]

BLAST of Lcy11g011030 vs. ExPASy Swiss-Prot
Match: Q03274 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.6e-08
Identity = 63/207 (30.43%), Postives = 90/207 (43.48%), Query Frame = 0


Query: 1   MKRILQDIISENQSAFV------PGRSVFDNIIIGHECLHT-IKSRRTGRKGWVALKLDM 60
           ++R+L  I+++   A V       G +  D  ++    L T I SRR  RK +  + LD+
Sbjct: 85  LQRLLHRILAKRLEAAVELHPAQKGYARIDGTLVNSLLLDTYISSRREQRKTYNVVSLDV 144

Query: 61  IKAYDRVEWS----FLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGL 120
            KA+D V  S     L++L I  G +      L D  TT R         T  I  +RG+
Sbjct: 145 RKAFDTVSHSSICRALQRLGIDEGTSNYITGSLSDSTTTIRVG---PGSQTRKICIRRGV 204

Query: 121 RQGDPLSSYLF-LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQAT 180
           +QGDPLS +LF  +  E L SL +     G +   K       I  L FADD L+     
Sbjct: 205 KQGDPLSPFLFNAVLDELLCSLQSTPGIGGTIGEEK-------IPVLAFADDLLLLEDND 264

Query: 181 TAQVTALRTLLQVYETALGQEINVTKS 196
               T L T+   +    G  +N  KS
Sbjct: 265 VLLPTTLATVANFFRLR-GMSLNAKKS 280

[Close]

BLAST of Lcy11g011030 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.8e-86
Identity = 178/433 (41.11%), Postives = 254/433 (58.66%), Query Frame = 0


Query: 1    MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
            +K ++  +IS+ QSAFVP R++ DN+IIGHECLHTI S ++G  G  ALKLD+ KA+DRV
Sbjct: 687  LKNVIGLVISDAQSAFVPSRAISDNVIIGHECLHTINSCKSGLIGMAALKLDLSKAFDRV 746

Query: 61   EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
            EW++L+ +  K+GFN  W+  ++ CI+T RFS+ +N  P     P RG+RQGDPLS YLF
Sbjct: 747  EWTYLECIMRKMGFNEGWIQAIIQCISTVRFSIHLNGSPGGCFQPSRGIRQGDPLSPYLF 806

Query: 121  LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
            LLC+E LS+L+   N+ G ++G+   ++   I+HL FADDSLIF ++  ++  ALR LL 
Sbjct: 807  LLCAEGLSALINHENNSGRLTGIHFEENNTSITHLLFADDSLIFLRSLESECLALRRLLD 866

Query: 181  VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVVDSLGAVAQAIPS-------- 240
             Y  A GQ IN +KSA+ FSPNV  + +  LQ I+ +++V   G     +PS        
Sbjct: 867  SYGRASGQCINFSKSALLFSPNVHPERQQYLQCILNVKLVSHFGNYL-GLPSHFTRRRGE 926

Query: 241  -------------FIMSCFRL---------PSTLCDDIHR-------MMARVIHAKYAHG 300
                         +   C  L          + +   + R       ++++V+  KY   
Sbjct: 927  SRKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYFKD 986

Query: 301  LSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKESKFRPIAKD 360
             SLL A   S  S+FW+  +W R LL +G+   VGNG TI  F DPW+P+ + F+P+  +
Sbjct: 987  TSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFN 1046

Query: 361  HVRNHENRLVADFITPSNEWDVSMLRDYVWEEDVRLITTILISSVNLEDKWIWHYSKNGN 397
            +     +  VA FIT    WDV+ +      ED  LI ++ ISS NL+D W+WHY K GN
Sbjct: 1047 N--GALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGN 1106

[Close]

BLAST of Lcy11g011030 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-06
Identity = 52/206 (25.24%), Postives = 90/206 (43.69%), Query Frame = 0


Query: 352  VWEEDVRLITTILISSVNLEDKWIWHY------SKNGNYSVKSGYKLAMTLSSMVGGES- 411
            +W +   LI    +S V  + +W+  +      ++  NYS ++       +       S 
Sbjct: 1241 IWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYWRPSSSV 1300

Query: 412  STKAMKAVKPNRIGAGLGVFIMGAGDTIYGAMEMVENMDLSPMAVEVQAILQALRLLQRL 471
            S K              G  I  +  ++  A  +     LSP+  E++ IL+ L+     
Sbjct: 1301 SLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAAAS 1360

Query: 472  QIREVRMYSDSINAISMINKDLVTTTDVAHWIVNIQEMCKEFHAISFHYVFRDRNLRADA 531
                + + SDS+ AI +I  ++ T  D  +W++ IQ +   F  ISF +  R  N  A  
Sbjct: 1361 NFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQCNRAAHG 1420

Query: 532  LAKHALAN-NSTMLWLSDFPTWLLSM 550
            LAK  + + ++T  WL +FPTWLL +
Sbjct: 1421 LAKWGITSPSATYAWLFNFPTWLLDL 1446

HSP 2 Score: 322.4 bits (825), Expect = 3.8e-84
Identity = 221/721 (30.65%), Postives = 320/721 (44.38%), Query Frame = 0


Query: 1    MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
            +K +L  +ISE QSAF+P R + DNI++  E +H+IK R+ G KG+ ALKLDM KA+DRV
Sbjct: 450  LKEVLPHVISETQSAFLPQRQITDNILVAFELIHSIKHRKRGTKGYAALKLDMSKAFDRV 509

Query: 61   EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
            EWS+L  +  K+GFN RW+ L+M+C+TT  FS LIN   T +++PQRGLRQGDPLS YLF
Sbjct: 510  EWSYLAAVMGKMGFNIRWITLIMNCLTTTTFSFLINGTVTGSVLPQRGLRQGDPLSPYLF 569

Query: 121  LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
            L+CSE LS LL    + G + G+  ++  P I+HL FADDSL+FCQA      A++  L 
Sbjct: 570  LICSEGLSRLLKYEEAVGRLKGLAIARTAPTITHLLFADDSLLFCQANDRSCGAIKRALD 629

Query: 181  VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVVDS------------------ 240
            +Y  A GQ +N  KS M FSPN +++ +     I+ M + D                   
Sbjct: 630  IYHRASGQLLNEDKSVMSFSPNTTDEVKHSFVQILGMPISDCHEKYLGLPAYSEQNKSQL 689

Query: 241  ----------------------------LGAVAQAIPSFIMSCFRLPSTLCDDIHRMMAR 300
                                        L AV Q+IP++ MSCF+L +  C +I  MMA+
Sbjct: 690  FADIKDRIWKMLHAWNDKLFSIGGKEVLLKAVVQSIPTYAMSCFKLSTKFCKEIDTMMAQ 749

Query: 301  -----VIHAKYAH-------------------GLSLLSAPVKSNCSFFWRSCIWARRLLH 360
                     K  H                    +  LSA      S  W+   W + LL 
Sbjct: 750  FWWGTTYDKKRTHWKKWKFLCTSKMEGGSVLSDIRFLSASSAGVSSMTWQGICWGKDLLI 809

Query: 361  QGMCKMVGNGMTIDFFKDPWIPKESKFRPIAKDHVRNHENRLVADFITPSNEWDVSMLRD 420
            QG+   VG+G++I    DPWIP +++F P+         +  VAD+ITP+  WDV+ L +
Sbjct: 810  QGLRLQVGSGLSIRTATDPWIPAQNRFTPV---RFTGFADSCVADYITPNKVWDVTQLHN 869

Query: 421  YVWEEDVRLITTILISSVNLEDKWIWHYSKNGNYSVKSGYKLAMTLSSM---VGGESSTK 480
                 DV  I  I +S    +D +IWHY+  G Y+V+SGY LA +L++     G  S  K
Sbjct: 870  DFSSIDVDNILKIPLSLAAQDDNFIWHYTPTGVYTVQSGYHLAYSLATQNQTTGSNSQEK 929

Query: 481  AMK-------------------------------------------AVKPNRIGA----- 540
              K                                             KP  I A     
Sbjct: 930  WWKYFWSLQLPSKIPALVVYVHVRGNLLDMRYSVVNTLNRVVHHKPCKKPAEIFAGSMAY 989

Query: 541  -------------------------------------------------GLGVFIMGAGD 550
                                                             G G  I     
Sbjct: 990  LSHFSQASHTSSIVHNDPTVADHSPWIPPPPGLCKLNVDAAVISAQNKLGYGAVIRDHRG 1049

[Close]

BLAST of Lcy11g011030 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 5.5e-83
Identity = 181/512 (35.35%), Postives = 260/512 (50.78%), Query Frame = 0


Query: 1   MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
           +K +L  +I+ENQSAFVP R + DN++   E +HTIK  + GR   +ALKLDM KAYDRV
Sbjct: 457 LKTVLPHVITENQSAFVPNRMILDNVMAAFEIMHTIKGVKKGRDVKMALKLDMAKAYDRV 516

Query: 61  EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
           EW FL+++ +KLGF+  WV  +MDCI+T  FS+L    P   I+PQRGLRQG PLS YLF
Sbjct: 517 EWVFLREMMLKLGFSATWVAKVMDCISTTTFSMLWKGNPVGHIMPQRGLRQGCPLSPYLF 576

Query: 121 LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
           L+C+E  S LL  A  RG + G++ ++  P ++HL FADDS++F +AT     AL TL Q
Sbjct: 577 LMCTEGFSCLLRGAERRGDLVGVQVARGGPSVTHLLFADDSILFMKATNEACRALETLFQ 636

Query: 181 VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVVDS------------------ 240
            YE   GQ+IN +KSA   SPN +     +++ ++ + VV                    
Sbjct: 637 TYEEVSGQQINYSKSAFSLSPNATRADFDMIKGVLNVPVVQCHEKYLGLPTIAGKGRKQL 696

Query: 241 ----------------------------LGAVAQAIPSFIMSCFRLPSTLCDDIHRMM-- 300
                                       + AV QAIP++ MSCFR+P  LC +++ +M  
Sbjct: 697 FQHLKDKLWKHISGWKEKLLSRAGKEILMKAVLQAIPTYSMSCFRIPKGLCKELNGIMAR 756

Query: 301 ---------------------------------------------------------ARV 360
                                                                    AR+
Sbjct: 757 FWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARI 816

Query: 361 IHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKES 408
             A+Y   +  L A V +N SF WRS  W + LL++G+   VGNG++I  + D W+P  S
Sbjct: 817 FRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPS 876

[Close]

BLAST of Lcy11g011030 vs. ExPASy TrEMBL
Match: M5W5F3 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026368mg PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.0e-82
Identity = 181/512 (35.35%), Postives = 261/512 (50.98%), Query Frame = 0


Query: 1   MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
           +K +L  +I+E QSAFVP R + DN++   E ++TIK  + GR   +ALKLDM KAYDRV
Sbjct: 228 LKTVLSHVITETQSAFVPNRMILDNVMAAFEIMNTIKGVKKGRDVQMALKLDMAKAYDRV 287

Query: 61  EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
           EW FL+ + +KLGF+  WV  +MDCI+T  FSVL    P   I+PQRGLRQG PLS YLF
Sbjct: 288 EWVFLRAMMLKLGFSATWVSKVMDCISTTTFSVLWKGTPVGHIMPQRGLRQGCPLSPYLF 347

Query: 121 LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
           L+C+E  S LL  A  RG + G++ ++  P ++HL FADDS++F +AT     AL TL Q
Sbjct: 348 LICTEGFSCLLRGAERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKDCMALETLFQ 407

Query: 181 VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVV----DSLG------------ 240
            YE   GQ+IN +KSA+  SPN +     +++ ++ + VV    + LG            
Sbjct: 408 TYEEVTGQQINYSKSALSLSPNATRADFDMIEGVLNVPVVRCHENYLGLPTIAGKGRKQL 467

Query: 241 ------------------------------AVAQAIPSFIMSCFRLPSTLCDDIHRMM-- 300
                                         AV QAIP++ MSCFR+P  LC +++ +M  
Sbjct: 468 FQHLKDKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMAR 527

Query: 301 ---------------------------------------------------------ARV 360
                                                                    AR+
Sbjct: 528 FWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARI 587

Query: 361 IHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKES 408
             A+Y   +  L A V +N SF WRS  W + LL++G+   VG+G++I  + D W+P  S
Sbjct: 588 FRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPS 647

[Close]

BLAST of Lcy11g011030 vs. ExPASy TrEMBL
Match: A0A251NPF0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G123900 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.0e-82
Identity = 181/512 (35.35%), Postives = 261/512 (50.98%), Query Frame = 0


Query: 1   MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
           +K +L  +I+E QSAFVP R + DN++   E ++TIK  + GR   +ALKLDM KAYDRV
Sbjct: 191 LKTVLSHVITETQSAFVPNRMILDNVMAAFEIMNTIKGVKKGRDVQMALKLDMAKAYDRV 250

Query: 61  EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
           EW FL+ + +KLGF+  WV  +MDCI+T  FSVL    P   I+PQRGLRQG PLS YLF
Sbjct: 251 EWVFLRAMMLKLGFSATWVSKVMDCISTTTFSVLWKGTPVGHIMPQRGLRQGCPLSPYLF 310

Query: 121 LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
           L+C+E  S LL  A  RG + G++ ++  P ++HL FADDS++F +AT     AL TL Q
Sbjct: 311 LICTEGFSCLLRGAERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKDCMALETLFQ 370

Query: 181 VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVV----DSLG------------ 240
            YE   GQ+IN +KSA+  SPN +     +++ ++ + VV    + LG            
Sbjct: 371 TYEEVTGQQINYSKSALSLSPNATRADFDMIEGVLNVPVVRCHENYLGLPTIAGKGRKQL 430

Query: 241 ------------------------------AVAQAIPSFIMSCFRLPSTLCDDIHRMM-- 300
                                         AV QAIP++ MSCFR+P  LC +++ +M  
Sbjct: 431 FQHLKDKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMAR 490

Query: 301 ---------------------------------------------------------ARV 360
                                                                    AR+
Sbjct: 491 FWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARI 550

Query: 361 IHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKES 408
             A+Y   +  L A V +N SF WRS  W + LL++G+   VG+G++I  + D W+P  S
Sbjct: 551 FRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPS 610

[Close]

BLAST of Lcy11g011030 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 330.1 bits (845), Expect = 3.7e-86
Identity = 178/433 (41.11%), Postives = 254/433 (58.66%), Query Frame = 0


Query: 1    MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
            +K ++  +IS+ QSAFVP R++ DN+IIGHECLHTI S ++G  G  ALKLD+ KA+DRV
Sbjct: 687  LKNVIGLVISDAQSAFVPSRAISDNVIIGHECLHTINSCKSGLIGMAALKLDLSKAFDRV 746

Query: 61   EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
            EW++L+ +  K+GFN  W+  ++ CI+T RFS+ +N  P     P RG+RQGDPLS YLF
Sbjct: 747  EWTYLECIMRKMGFNEGWIQAIIQCISTVRFSIHLNGSPGGCFQPSRGIRQGDPLSPYLF 806

Query: 121  LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
            LLC+E LS+L+   N+ G ++G+   ++   I+HL FADDSLIF ++  ++  ALR LL 
Sbjct: 807  LLCAEGLSALINHENNSGRLTGIHFEENNTSITHLLFADDSLIFLRSLESECLALRRLLD 866

Query: 181  VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVVDSLGAVAQAIPS-------- 240
             Y  A GQ IN +KSA+ FSPNV  + +  LQ I+ +++V   G     +PS        
Sbjct: 867  SYGRASGQCINFSKSALLFSPNVHPERQQYLQCILNVKLVSHFGNYL-GLPSHFTRRRGE 926

Query: 241  -------------FIMSCFRL---------PSTLCDDIHR-------MMARVIHAKYAHG 300
                         +   C  L          + +   + R       ++++V+  KY   
Sbjct: 927  SRKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYFKD 986

Query: 301  LSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKESKFRPIAKD 360
             SLL A   S  S+FW+  +W R LL +G+   VGNG TI  F DPW+P+ + F+P+  +
Sbjct: 987  TSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFN 1046

Query: 361  HVRNHENRLVADFITPSNEWDVSMLRDYVWEEDVRLITTILISSVNLEDKWIWHYSKNGN 397
            +     +  VA FIT    WDV+ +      ED  LI ++ ISS NL+D W+WHY K GN
Sbjct: 1047 N--GALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGN 1106

[Close]

BLAST of Lcy11g011030 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-06
Identity = 52/206 (25.24%), Postives = 90/206 (43.69%), Query Frame = 0


Query: 352  VWEEDVRLITTILISSVNLEDKWIWHY------SKNGNYSVKSGYKLAMTLSSMVGGES- 411
            +W +   LI    +S V  + +W+  +      ++  NYS ++       +       S 
Sbjct: 1241 IWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYWRPSSSV 1300

Query: 412  STKAMKAVKPNRIGAGLGVFIMGAGDTIYGAMEMVENMDLSPMAVEVQAILQALRLLQRL 471
            S K              G  I  +  ++  A  +     LSP+  E++ IL+ L+     
Sbjct: 1301 SLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAAAS 1360

Query: 472  QIREVRMYSDSINAISMINKDLVTTTDVAHWIVNIQEMCKEFHAISFHYVFRDRNLRADA 531
                + + SDS+ AI +I  ++ T  D  +W++ IQ +   F  ISF +  R  N  A  
Sbjct: 1361 NFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQCNRAAHG 1420

Query: 532  LAKHALAN-NSTMLWLSDFPTWLLSM 550
            LAK  + + ++T  WL +FPTWLL +
Sbjct: 1421 LAKWGITSPSATYAWLFNFPTWLLDL 1446

HSP 2 Score: 318.9 bits (816), Expect = 8.6e-83
Identity = 189/518 (36.49%), Postives = 267/518 (51.54%), Query Frame = 0


Query: 1    MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
            +K IL  IIS NQSAF+P R + DN+IIG+ECLH I+  +  R G VALKLD+ KAYDRV
Sbjct: 620  LKPILNHIISPNQSAFIPNRLITDNVIIGYECLHKIRLSKGRRNGLVALKLDISKAYDRV 679

Query: 61   EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
            EW+FL+Q    LGF+ +W+ L+M CITT  FSVLIN  P   I P+RGLRQG PLS YLF
Sbjct: 680  EWNFLEQTMSNLGFSAKWISLIMSCITTTCFSVLINGNPVGLIKPERGLRQGCPLSPYLF 739

Query: 121  LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
            +LC+EA S+LL +A     + G+K ++    I+HL FADDSL+F +A+ A    L+ +  
Sbjct: 740  ILCAEAFSNLLNQAEREQKIRGLKFAQDIT-ITHLLFADDSLVFSKASVADCKYLKGIFD 799

Query: 181  VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVVDS------------------ 240
             Y  A GQ  N  KS+MFFS   S++    ++SI +++VV                    
Sbjct: 800  CYAKASGQIFNFEKSSMFFSGKASSEQISAIKSIFQLKVVPKYEKYLGLPPMLGRNKMSF 859

Query: 241  ----------------------------LGAVAQAIPSFIMSCFRLPSTLCDDIHR---- 300
                                        + AVAQA+P++ MS F+LP  LC+DI +    
Sbjct: 860  FKEVKLKVTSKISSWHHKLFSAGGKEILIKAVAQAVPAYAMSVFKLPKGLCEDIQKEIAR 919

Query: 301  -------------------------------------------------------MMARV 360
                                                                   +MARV
Sbjct: 920  FWWGTKKDKHGIHWARWDSMSKAKRRGGLGFRDLPSFNQALVAKQGWRLVRYPNSLMARV 979

Query: 361  IHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKES 414
            + A+Y    +  +A V SN SF WRS +W  +++ +G+   +G+G  +  +KD WIP+ +
Sbjct: 980  MKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPA 1039

[Close]

BLAST of Lcy11g011030 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 53.5 bits (127), Expect = 6.8e-03
Identity = 39/138 (28.26%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 420  GLGVFIMGA-GDTIYGAMEMVENMDLSPMAVEVQAILQALRLLQRLQIREVRMYSDSINA 479
            GLG  +  A G  +   ++  +  +   +A E +AI   L++  ++    + + SD    
Sbjct: 1317 GLGAIVRDAEGKILAVGIKQAQFRERVSLA-EAEAIHWGLQVANQISSSSLIVESDCKEV 1376

Query: 480  ISMINKDLVTTTDVAHWIV-NIQEMCKEFHAISFHYVFRDRNLRADALAKHALANNSTML 539
            + ++N    + T++ HWI+ +++   KEF  + F ++ R  N  A ALAK AL N+ST +
Sbjct: 1377 VELLNNTKGSRTEI-HWILSDVRRESKEFKQVQFSFIPRTCNTYAHALAKFALRNSSTDV 1436

Query: 540  WLSDFPTWLLSMDNVAHC 556
            W+  FP     + NV +C
Sbjct: 1437 WVGTFPA---EVQNVLNC 1449

HSP 2 Score: 318.5 bits (815), Expect = 1.1e-82
Identity = 181/512 (35.35%), Postives = 260/512 (50.78%), Query Frame = 0


Query: 1   MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
           +K +L  +I+ENQSAFVP R + DN++   E +HTIK  + GR   +ALKLDM KAYDRV
Sbjct: 457 LKTVLPHVITENQSAFVPNRMILDNVMAAFEIMHTIKGVKKGRDVKMALKLDMAKAYDRV 516

Query: 61  EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
           EW FL+++ +KLGF+  WV  +MDCI+T  FS+L    P   I+PQRGLRQG PLS YLF
Sbjct: 517 EWVFLREMMLKLGFSATWVAKVMDCISTTTFSMLWKGNPVGHIMPQRGLRQGCPLSPYLF 576

Query: 121 LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
           L+C+E  S LL  A  RG + G++ ++  P ++HL FADDS++F +AT     AL TL Q
Sbjct: 577 LMCTEGFSCLLRGAERRGDLVGVQVARGGPSVTHLLFADDSILFMKATNEACRALETLFQ 636

Query: 181 VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVVDS------------------ 240
            YE   GQ+IN +KSA   SPN +     +++ ++ + VV                    
Sbjct: 637 TYEEVSGQQINYSKSAFSLSPNATRADFDMIKGVLNVPVVQCHEKYLGLPTIAGKGRKQL 696

Query: 241 ----------------------------LGAVAQAIPSFIMSCFRLPSTLCDDIHRMM-- 300
                                       + AV QAIP++ MSCFR+P  LC +++ +M  
Sbjct: 697 FQHLKDKLWKHISGWKEKLLSRAGKEILMKAVLQAIPTYSMSCFRIPKGLCKELNGIMAR 756

Query: 301 ---------------------------------------------------------ARV 360
                                                                    AR+
Sbjct: 757 FWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARI 816

Query: 361 IHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKES 408
             A+Y   +  L A V +N SF WRS  W + LL++G+   VGNG++I  + D W+P  S
Sbjct: 817 FRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPS 876

[Close]

BLAST of Lcy11g011030 vs. NCBI nr
Match: XP_017250619.1 (PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus])

HSP 1 Score: 316.2 bits (809), Expect = 5.6e-82
Identity = 174/509 (34.18%), Postives = 256/509 (50.29%), Query Frame = 0


Query: 1    MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
            +K IL  II+  QSAFVPGR + DN +I +ECLH ++  R+G+K +VA+KLDM KAYDRV
Sbjct: 740  LKPILPLIINGTQSAFVPGRLITDNALIAYECLHHLRHMRSGKKCFVAMKLDMSKAYDRV 799

Query: 61   EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
            EW F++++  KLGF+ +WV  +M C+T+  +S  +N +    + P RGLRQGDPLS YLF
Sbjct: 800  EWIFIEKMLTKLGFSQQWVKKIMKCVTSVNYSFQVNGQIYGKVFPSRGLRQGDPLSPYLF 859

Query: 121  LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
            L+C+E  S+LL +A +R  + G+K +++ P ISHLFFADDSL+F +A+T  + +++ +  
Sbjct: 860  LICAEGFSALLRQAENRSDILGLKIARNAPSISHLFFADDSLLFLKASTRSLNSIQNIFS 919

Query: 181  VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVVDS------------------ 240
            +Y    GQ IN  KS +FFSPN +ND R      + MQ  ++                  
Sbjct: 920  LYSECSGQMINFNKSLLFFSPNTTNDVRSTFMVSLNMQTTEAIETYLGLPMLGGKNKKIL 979

Query: 241  ----------------------------LGAVAQAIPSFIMSCFRLPSTLCDDIHRMMAR 300
                                        L AV QA+P++ MSCF++P   C +I +++AR
Sbjct: 980  FRSIKEKVWARLHSWRPDVFSQGGKEILLKAVIQAMPTYFMSCFKIPEGQCQEIEKLLAR 1039

Query: 301  -----------------------------------------------------------V 360
                                                                       V
Sbjct: 1040 YWWGSVHSKRKIHWRAWTKISTPKSEGGLGFRTFIHYNQALLAKQAWRILIYPTSLLSQV 1099

Query: 361  IHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKES 405
            + AKY    S L +      S  WRS +W + LL +G+ + +GNG +   FKDPW+ +  
Sbjct: 1100 LQAKYFASSSFLDSKEGRCPSLTWRSIVWGKTLLIEGLRRRIGNGQSTRAFKDPWLARPP 1159

[Close]

BLAST of Lcy11g011030 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 315.1 bits (806), Expect = 1.2e-81
Identity = 181/512 (35.35%), Postives = 261/512 (50.98%), Query Frame = 0


Query: 1   MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
           +K +L  +I+E QSAFVP R + DN++   E ++TIK  + GR   +ALKLDM KAYDRV
Sbjct: 191 LKTVLSHVITETQSAFVPNRMILDNVMAAFEIMNTIKGVKKGRDVQMALKLDMAKAYDRV 250

Query: 61  EWSFLKQLRIKLGFNPRWVDLLMDCITTARFSVLINNKPTDTIIPQRGLRQGDPLSSYLF 120
           EW FL+ + +KLGF+  WV  +MDCI+T  FSVL    P   I+PQRGLRQG PLS YLF
Sbjct: 251 EWVFLRAMMLKLGFSATWVSKVMDCISTTTFSVLWKGTPVGHIMPQRGLRQGCPLSPYLF 310

Query: 121 LLCSEALSSLLTKANSRGVMSGMKPSKHCPGISHLFFADDSLIFCQATTAQVTALRTLLQ 180
           L+C+E  S LL  A  RG + G++ ++  P ++HL FADDS++F +AT     AL TL Q
Sbjct: 311 LICTEGFSCLLRGAERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKDCMALETLFQ 370

Query: 181 VYETALGQEINVTKSAMFFSPNVSNDARIVLQSIMRMQVV----DSLG------------ 240
            YE   GQ+IN +KSA+  SPN +     +++ ++ + VV    + LG            
Sbjct: 371 TYEEVTGQQINYSKSALSLSPNATRADFDMIEGVLNVPVVRCHENYLGLPTIAGKGRKQL 430

Query: 241 ------------------------------AVAQAIPSFIMSCFRLPSTLCDDIHRMM-- 300
                                         AV QAIP++ MSCFR+P  LC +++ +M  
Sbjct: 431 FQHLKDKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMAR 490

Query: 301 ---------------------------------------------------------ARV 360
                                                                    AR+
Sbjct: 491 FWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARI 550

Query: 361 IHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPWIPKES 408
             A+Y   +  L A V +N SF WRS  W + LL++G+   VG+G++I  + D W+P  S
Sbjct: 551 FRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPS 610

[Close]

BLAST of Lcy11g011030 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-14
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 94  LINNKPTDTIIPQRGLRQGDPLSSYLFLLCSEALSSLLTKANSRGVMSGMKPSKHCPGIS 153
           +IN  P   + P RGLRQGDPLS YLF+LC+E LS L  +A  +G + G++ S + P I+
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 154 HLFFADDS 162
           HL FADD+
Sbjct: 73  HLLFADDT 80

[Close]

BLAST of Lcy11g011030 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 76.3 bits (186), Expect = 9.1e-14
Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 1  MKRILQDIISENQSAFVPGRSVFDNIIIGHECLHTIKSRRTGRKGWVALKLDMIKAYDRV 60
          +K ++ ++I   Q++F+PGR   DNI+   E +H+++ R+ G KGW+ LKLD+ KAYDR+
Sbjct: 5  LKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMR-RKKGVKGWMLLKLDLEKAYDRI 64

Query: 61 EWSFLKQLRIKLGFNPRWV 80
           W +L+   I  GF   W+
Sbjct: 65 RWDYLEDTLISAGFPEVWL 82

[Close]

BLAST of Lcy11g011030 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 7.7e-13
Identity = 46/174 (26.44%), Postives = 81/174 (46.55%), Query Frame = 0


Query: 251 MMARVIHAKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTIDFFKDPW 310
           +MA+V  ++Y H    L+AP+ S  SF W+S   ++ +L QG   +VGNG  I  ++  W
Sbjct: 83  LMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKW 142

Query: 311 IPKESKFRPIAKDHVRNHENRLVADFITPSN-------EWDVSMLRDYVWEEDVRLITTI 370
           +  +     +    V   E   V+  +  S+       EW   ++     E + +LI  +
Sbjct: 143 LDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGEL 202

Query: 371 LISSVNLEDKWIWHYSKNGNYSVKSGYKLAMTLSSMVGGESSTKAMKAVKPNRI 418
                 + D + W Y+ +G+Y+VKSGY     L+ ++   SS + +     N I
Sbjct: 203 RPGGRRILDSYTWDYTSSGDYTVKSGY---WVLTQIINKRSSPQEVSEPSLNPI 253

[Close]

BLAST of Lcy11g011030 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-08
Identity = 39/139 (28.06%), Postives = 62/139 (44.60%), Query Frame = 0


Query: 258 AKYAHGLSLLSAPVKSNCSFFWRSCIWARRLLHQGMCKMVGNGMTI----DFFKDPWIPK 317
           A+Y   +S+L A V+   S+ W S +    LL +G   ++G+G  I    D   D   P+
Sbjct: 3   ARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPR 62

Query: 318 ESKFRPIAKDHVRNHENRLVADFITPSNEWDVSMLRDYVWEEDVRLITTILISSVNLEDK 377
                   K+   N+       +      WD S +  +V + D   I  I ++     DK
Sbjct: 63  PLNTEETYKEMTINNLFERKGSYYF----WDDSKISQFVDQSDHGFIHRIYLAKSKKPDK 122

Query: 378 WIWHYSKNGNYSVKSGYKL 393
            IW+Y+  G Y+V+SGY L
Sbjct: 123 IIWNYNTTGEYTVRSGYWL 137

[Close]

BLAST of Lcy11g011030 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-06
Identity = 37/94 (39.36%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 306 FKDPWIPKESKFRPIAKDHVRNHENRL-VADFITP-SNEWDVSMLRDYVWEEDVRLITTI 365
           +KDPWIP     RP AK  +   ++ L V D I   +N W +  L+  +   D+ LI  I
Sbjct: 6   WKDPWIP-TILARP-AKSILNIRDSLLYVNDLIDQNTNLWKLDRLQALIDPVDIPLILGI 65

Query: 366 LISSVNLEDKWIWHYSKNGNYSVKSGYKLAMTLS 398
             S   L D + W ++K+GNY+VKSGY +A  LS
Sbjct: 66  RPSRTYLSDGFSWSHTKSGNYTVKSGYWVARDLS 97

The following BLAST results are available for this feature:

BLAST of Lcy11g011030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	1.0e-14	31.63	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P92555	2.0e-13	51.47	Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q05118	2.0e-10	30.41	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra...	[more]
P11369	3.5e-10	25.13	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
Q03274	5.6e-08	30.43	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra...	[more]

BLAST of Lcy11g011030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX30	1.8e-86	41.11	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DX30	1.1e-06	25.24	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5E4FZN9	5.5e-83	35.35	PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1	[more]
M5W5F3	6.0e-82	35.35	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A251NPF0	6.0e-82	35.35	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]

BLAST of Lcy11g011030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158377.1	3.7e-86	41.11	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_022158377.1	2.2e-06	25.24	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_006491472.1	6.8e-03	28.26	uncharacterized protein LOC102626455 [Citrus sinensis]	[more]
XP_017250619.1	5.6e-82	34.18	PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]	[more]
ONI01138.1	1.2e-81	35.35	hypothetical protein PRUPE_6G123900 [Prunus persica]	[more]

BLAST of Lcy11g011030 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG01250.1	1.4e-14	51.47	RNA-directed DNA polymerase (reverse transcriptase)	[more]
AT4G20520.1	9.1e-14	40.51	RNA binding;RNA-directed DNA polymerases	[more]
AT4G29090.1	7.7e-13	26.44	Ribonuclease H-like superfamily protein	[more]
AT3G09510.1	1.1e-08	28.06	Ribonuclease H-like superfamily protein	[more]
AT2G22440.1	1.4e-06	39.36	BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 416..529 e-value: 3.8E-17 score: 62.2
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 417..531 score: 10.755825
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 410..536 e-value: 7.6E-16 score: 60.3
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 3..199 e-value: 7.7E-29 score: 100.8
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..227 score: 9.244599
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 225..393
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 225..393 coord: 28..220
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 28..220
None	No IPR available	CDD	cd01650	RT_nLTR_like	coord: 1..224 e-value: 2.87737E-34 score: 127.407
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 411..527 e-value: 3.55973E-10 score: 55.7832
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 418..532
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 4..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g011030.1	Lcy11g011030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity