Lcy11g010880 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCAGTTCGTTTAGAGCTCCGAGAAACACGTGGAGGAAGAACGAGGTTGCGAAGCTTGTGGAGTCCCTCGTGTTCTTAGTTCATGTGGGCAGTTGGAGGTCTGGTAATGGGACGTTCAGACCTGGATATCAAGCGCAACTGGAGCATTTGATGAGGGAGAAACTGCCTGGACGGGACGTCCAACACAAAGCTACATTGAATCCAGGGTTCGCACCCTGA ATGACCAGTTCGTTTAGAGCTCCGAGAAACACGTGGAGGAAGAACGAGGTTGCGAAGCTTGTGGAGTCCCTCGTGTTCTTAGTTCATGTGGGCAGTTGGAGGTCTGGTAATGGGACGTTCAGACCTGGATATCAAGCGCAACTGGAGCATTTGATGAGGGAGAAACTGCCTGGACGGGACGTCCAACACAAAGCTACATTGAATCCAGGGTTCGCACCCTGA ATGACCAGTTCGTTTAGAGCTCCGAGAAACACGTGGAGGAAGAACGAGGTTGCGAAGCTTGTGGAGTCCCTCGTGTTCTTAGTTCATGTGGGCAGTTGGAGGTCTGGTAATGGGACGTTCAGACCTGGATATCAAGCGCAACTGGAGCATTTGATGAGGGAGAAACTGCCTGGACGGGACGTCCAACACAAAGCTACATTGAATCCAGGGTTCGCACCCTGA MTSSFRAPRNTWRKNEVAKLVESLVFLVHVGSWRSGNGTFRPGYQAQLEHLMREKLPGRDVQHKATLNPGFAP Homology
BLAST of Lcy11g010880 vs. ExPASy TrEMBL
Match: A0A5D3CQS4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00390 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.3e-15 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of Lcy11g010880 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.0e-13 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy11g010880 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.0e-13 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy11g010880 vs. ExPASy TrEMBL
Match: A0A5A7U6Z3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00120 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.5e-12 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy11g010880 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.2e-12 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy11g010880 vs. NCBI nr
Match: KAA0066605.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14213.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 1.1e-14 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of Lcy11g010880 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 2.1e-13 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy11g010880 vs. NCBI nr
Match: KAA0051058.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 5.1e-12 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy11g010880 vs. NCBI nr
Match: KAA0048377.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 6.7e-12 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy11g010880 vs. NCBI nr
Match: KAA0063337.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 6.7e-12 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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