Lcy11g010470 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g010470
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
LocationChr11: 11900400 .. 11905562 (+)
RNA-Seq ExpressionLcy11g010470
SyntenyLcy11g010470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTGTCATGTACTTAAAAATTTTAAACATATTTGATCCAATCAAAGAAAATTTTTTACCATCTAACTAAACTGATCGAGGAATTTCTAGAAATCTTCACTTGTGAATAACACTGAGAGATTATATATAGCATATGTGAGAGAGATAACAAACTCTCTCAACAAACTCAACAATTTAACAAACTCTAGTTACAACAAACTCAACAATTTAACAAACTCAAGTTATTAATATCATAACTAATTACATAATTAATTATTACTCTGCTAATATGCCTCCTCAAACTGAAGCACCCAACGGAAGCAAAAGTTTTGAACATAAATTTGTAAAAGACGGTCCAGACAAGGGCTATGTCAGAATGTCTGCGAGCTGATCAGTAGAGGCAATGTACTTGACATCGAGATCACCATGAACAACTTTCTGCCAAACAAAATGGTAATCAACCTCGATATGCTTTGTTCGAGCATGAAAAATAGGATTCCGAGCCAAAGCAATAGCCGAAACACTGTCACACAAAATTACAGGAGGATGAGAAACAAATATATGCATTTCACACAAGAGTTGCCTTAACCAATAAAGCTCAGCAGCAGTGACAGCAAGACTTCGATATTGAGCCTCAATAGAAGATCGTGAAACAATTGCTTGCTTCTTAGTAGACCAAGACACAGGCATATTACCAATAAAGAGAAGAAAACCAGACGTAGAACACCTATCCTTTGAGTCACCAGCCCAATCAGAATCACAATAGGCACAAATATTTAAAGATGAACCAGTAAAAGAAATACCAAGTGAACGAGTTCCAAACAAATATCTCAGAATACGTTTGGCAGCAGAGTAATGGGTAGTAGAAGGGCAATGCATATATTGGCTAACCTTGTTTACAGCAAATGAAATATCAGGTCGGGTACACGTTAAGTATTGTAAAGAACCATCAACCTGTCTATACAACAAGGGATTTTCAAAAGGAGGAGCACCATCATACATATCACAAGCAGTAGACATAGGTGTAGAGCATTGCTTGGCATTAACCATCCCAATTTTCAGAAGAAGATTAGAAAGATATTTGGACTGATTCACAAAGAAACCAGTTGACTACTTATGTACTTCAAGCCCCAGAAAATATTTCAAATACACCAAATCAGTAATATGAAATTCACTTCGTAATGCTACCTTTAAGCTCAGAAACATAAGTAGGGTCATTACTGGTTATGACAATATCATCAACGTAAAGTAGCAAGCATGTGAGTGAACCATTTACACGACGAACGAACAAAGAAGTATCAACCAGAGAGCCAACAAAACCAAGAGTGAGTAAATGAGAAGTAAATCGCTCAAACCAAGCACGTGGGGCTTGTTTTAACCCAAACAATGACTTATGTAATTTACACACACGATGGGGATAGATAGCATCTTTAAAACTGGGAGGCTGCATCATATATACGTCTTCCTTTAGAGAACCATGTAAAAAGGCATTCTTGACATCCAATTGAAACAAATCCCACTTATAAAAAGCTGCTAAAGCAAGAATGACCCTGACAGTAGTTTTTTTTAACAACGGACTAAAGGTTTCATAAAAATCCAAACCTTCCAACTGATTAAATCCCTCAGCAACTAGTCGACCCTTATAACGAGAAACTGAACCATCAGGGTTATATTTAGTGTGAAACACCCATTTACATCCAACTATATTCATACTATCAGTGGGAGGTACTAGAGTCCAAGTCCCTTGTTCTTCAAAAATTCTTAGCTTGTCTCCATTCAAGAATCTTAGAAGCAGCAGTATAAGAAGTTGGTTCAGTCAAAGAACTATTAACAACAAAAAATTTCTTTTTAAAAGTACCAGACTTGGACCGTGTTTGCATTGGATGTCTATTAGAGGCAACAACATCAGTAACAACAGCCTCATTTGGAGCAGATAAAATGGACTCATTAGGTGGAATAATAGCTTCAACAGACGCAACAGGCAAGGAATTAGAAACACTAGTATGATCACAAGTACTTGGGATATTGCAACCAACATCAGCACAAGTAGCAGACGGATAAAAAGAAGTCTCAGAGAGAAATTTATCAACCAAAGCAGGAAAAGTAGGATCCATTGGAGTCATATTAGACATAGAACCAATATTAGTAGCAGACATTCCAGCGAAAGGAAACACATGCTCATGGAAGATAACATGCCGAGAGATAATCATCTTCTTGGTAGACTGATTATAGCAAAGATATCCCTTGTAATCAACTGTATATCCCATAAAAATATGTTGTTCGGTCTTTGGTAGTAACTTAGCGACGTGTACGAACAAGATTTCTAATGAAGAATGCCTTTAAAACTGAAAAAGTTAGTAACAATAGCATTCACAAATTCACCCCCTCCGTCAGACCTGAAGATTTTGACTTTTTGAGACAATAGATTTTCAATAAGCGAAATAAACTATGGAATAATAGTAAATGCATCAGACTTATAGACCATTGGAAAAATCCATGTATAACGGCTGAAGTCATCCACAAAGCAAATATAATATCTATGGCCAGTAATAGATAAAACAGGGGAAGGGCCCCCACACATCACTGTGTAACAATTCAAGAGGCTTAGTAGTCATTGTTACTGAAGACTGAAAAGGTAATTTGCTCATTTTGCCTTTAAGACAACCAACACATTCAATAGTATTAATAGACTGTCCAATAGAAATAGAAGACTGAGAGACAAAATCTTACGAAGGACATTGGGAGATGGATGTCCAAGTCTAAAGTGCCACAAATCGGTTGTCTTTTTATTCAAAGTAAAAGCAGAAACATGGAAACCAGAGTAAACAACTGACGGTTGTGAAACAACTTGATTAGAGGACGAAACAACCTCACCACCTTTGAAACCACCAAATGGAAGGGGATACAAACCATCTTTACTATGTTCTCTGTACATAACCTTGCCCATTACTTTGTCTTGAATAAGAAACCAATGAGCATCAAACACAAAGATACAATTATTATCATGATAGCACTGAGAGAGAAGATTGGCAGAAATATCCGATACACATAGAATATTGGATAAGGATAAGTCATTATCAGATATCGAAAGAGTACCAAAGCCGGTCTAAGCAACAGAAAATGTTTGGCCACTAGCAACAACAATCAAATCTTCACCATTATAGTTTCCATTTAAATTCAGGTTAGACATATCAAATGTAACGTGAGAGTTACATCCACTATCAGCAAGCCAAAATGAGGAATTCGTAGCAGGATCAACAACAACAACCATAACAACAAGTTGAGACGGAGGATGACGTCCTTGAAAGGAAAAATTCATCCGGTTGTAACAGTCGAGTGCTCCATGGTCAGGTTTATTGCAAGTCTGGCGAACAACTCATCCAAAAGAGTTAATAAAAGAACTCGATGATGAAGATGAGTTAGAATTACCAGTGGAATTCTGGTAATTCGGAGAAGGTTGGGACCTAGAAGAGTTTGATCCGGAGCCTCCATTTCCACGTCCACGACCACGTGGTTAAAAATTTAAGCTGCTAGGAGATTGACAGCCACGTCCACGAAAGGAATTTGAGGAGCCTCGTCCAAATGTTGCCGCAATAGCTGATGGATTAAAAATTGAAGTAGTTTTATTCTGTTGCTCAATGAATTTGGCTTCAGACTTGAGTAGAGCATAAAGCTCCTCAAGTGTTACAGCTTCTCTTCGAGTTCGAATAGAGGTTTGCAATGAATTGTACTCAACGGGAAGTCCATGCAATGTATATAACAACACATCTTCGTCATCAATAGTTACCGCAACATTGGCCAATTGATCGCGAATTTCCTTGATTCGAGGAAGATAATCTTCAATTGACTCCGAAGCAGTTTTCGAGATAGTATGAAGAGCAGATTTAAGCTCGTGGATGTGAGACCTGGTGAGAGAAGAAAATTGCTTCTTAAGAGTTATCCAAACTTCTCTTGAGGTTTTGCAGCCAACGACGAAGGAGAAGGCATTCTTCGACAAGGTTGTGATAATCAAGGTAATTAGGGCATTGTCTTGAGTAGTCCACTGAGTGAAGACTGGATTGACTGTAGTAGATCGTGTTCCATCTTCTTGAAGAGAAATTTTGTCAGGCCGAGGAGTAGATCCATCGATTACTCCAAAAGTGAATGTGCCTTCTGTAACACCCGAGTTAGGAGGGTACATGAATGAACCGAGGCCACACCCGAATGAGAGGGATCCTAAGGACATGAAAGTATAGTCAAAATAAGCTTAAAAGAATTGATAGATACTACTTATACCAACAAGGTGCACCTTCCTTTTCGGTGGCTCAATTATAGGAACTTTGAAGTTAAGCGTGCTTGGCTTAGAGAAGTTCTATGTTGAGTGACCTCCTAAGAATTTTCTTAGGAAGCATGTGAGTGAGGACAAAACATGCTAAAAGGACTCACTCTTAGAAGCAGTTCAGATAAGTATGGTGACGTCGCCAGACCGTAGGGGATGTGGGGGAATGCCGAGGCCATGAGGTGCCGAATCCGGATTCTGAATCCTAGGCCTGGGGCGTTACAGATGGTTTCTTAGGAAGCATGTGAGTGAGGACAAAGCAAGCTAAAAGGACCCTGTGCCCGGATTCTGAATCCTAGGCCTGGGGCGTTACAAATGGTTTCTTAGGAAGCATGTGAGTGAGGACAAAACAAGCTAAAAGGACATTGTGTTGGTTTGTGAGGACAATATTCACTCTCAGAAGCAGTTCAGATAAGTATGGTGACGTCGTCAGGTCGTAGGGGATGTAGGGGAATGCCGGAGTCATGAGGTGCCGAATCTGGATTCCGAATCTTGGGCCTGTGGGGTTACAGATTTAGCCGAAGGTTGTGCGGTACGAGAGGGTGTCCGGTTGGCTAGGGAGCTCGGTTTTCAGCCTTTCCAGATTGAGAAGGACTCCTTACGGGTTCACCGCTTGTTGACGGCACCTTATGAAGATTTGTCGGAGCTGGGTGTCTTGCTGGATGAGGTAAAGCGGTGTGGTTTGTCTGGCTCTGCGAACTTGGTCTTGTTTACTCGTCGATCAGGCAATATGGCGGCTCACTCTTTGGCAAAACTTGCGATGGACTTTGCATTAGATCGAGTATGGTTGGAAGAATGGCCCAGAGATATTTCTCCTATGATTTCTACTGAATGTTTAGTTTCTTTTGATGTTGATTTGTAA

mRNA sequence

ATGGGATTGTCATGTTGTGCGGTACGAGAGGGTGTCCGGTTGGCTAGGGAGCTCGGTTTTCAGCCTTTCCAGATTGAGAAGGACTCCTTACGGGTTCACCGCTTGTTGACGGCACCTTATGAAGATTTGTCGGAGCTGGGTGTCTTGCTGGATGAGGTAAAGCGGTGTGGTTTGTCTGGCTCTGCGAACTTGGTCTTGTTTACTCGTCGATCAGGCAATATGGCGGCTCACTCTTTGGCAAAACTTGCGATGGACTTTGCATTAGATCGAGTATGGTTGGAAGAATGGCCCAGAGATATTTCTCCTATGATTTCTACTGAATGTTTAGTTTCTTTTGATGTTGATTTGTAA

Coding sequence (CDS)

ATGGGATTGTCATGTTGTGCGGTACGAGAGGGTGTCCGGTTGGCTAGGGAGCTCGGTTTTCAGCCTTTCCAGATTGAGAAGGACTCCTTACGGGTTCACCGCTTGTTGACGGCACCTTATGAAGATTTGTCGGAGCTGGGTGTCTTGCTGGATGAGGTAAAGCGGTGTGGTTTGTCTGGCTCTGCGAACTTGGTCTTGTTTACTCGTCGATCAGGCAATATGGCGGCTCACTCTTTGGCAAAACTTGCGATGGACTTTGCATTAGATCGAGTATGGTTGGAAGAATGGCCCAGAGATATTTCTCCTATGATTTCTACTGAATGTTTAGTTTCTTTTGATGTTGATTTGTAA

Protein sequence

MGLSCCAVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANLVLFTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTECLVSFDVDL
Homology
[Close]
BLAST of Lcy11g010470 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 9.4e-14
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 7   AVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANLV- 66
           AV EG+ LA E GF  FQIE DSLR+  LLT    D SE+GVL   +K   LS  A  V 
Sbjct: 161 AVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVIK-LFLSSHAERVS 220

Query: 67  -LFTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTEC 109
             FT R+GN  AH LA+LA+     ++W+EEWP +IS +++ +C
Sbjct: 221 FSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVDC 263

[Close]
BLAST of Lcy11g010470 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 0 

Query: 5   CCAVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANL 64
           C A +EGV LA E G  PFQIE DS +V  LL    ED SE+GVL   ++   +  S ++
Sbjct: 128 CLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESEIGVLASSIRH--IVSSLHI 187

Query: 65  ---VLFTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTE 108
                F  R GN  AH+LA++ M      VW+EEW  D+S +I+ +
Sbjct: 188 GGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVIAAD 231

[Close]
BLAST of Lcy11g010470 vs. ExPASy TrEMBL
Match: A0A6J1CIF1 (uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011237 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.2e-10
Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = 0 

Query: 10  EGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANLVLFTR 69
           EG++LA ++G  P  +E DS R+  L + P EDLSE G ++ + K            F +
Sbjct: 94  EGLQLASKIGVNPVILETDSSRIFNLFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVK 153

Query: 70  RSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTECL 110
           R GN AAH LA+ A+      +W+E+WP ++   +  ECL
Sbjct: 154 REGNKAAHMLARRALLLREFSIWMEDWPLELKSCLEMECL 193

[Close]
BLAST of Lcy11g010470 vs. ExPASy TrEMBL
Match: A0A1R3JXX0 (RNase H domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_13164 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 0 

Query: 5   CCAVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANL 64
           C A  + +  A+++GF    +E D+L + R +TA   D S +GV + E+K    S  + L
Sbjct: 198 CLAALKAITWAKDMGFNNIVLEGDALSIIRKVTASMPDFSPIGVYIAEIKVLSSSFVSCL 257

Query: 65  VLFTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTEC 109
                R GN+ AH LA L    +  R+W+EE P  I  ++ TEC
Sbjct: 258 FSHVHRDGNVIAHDLASLGSSLSETRIWIEEVPDSIVAVLQTEC 301

[Close]
BLAST of Lcy11g010470 vs. ExPASy TrEMBL
Match: A0A2P5ENY9 (Ribonuclease H-like domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_169030 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.4e-09
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 0 

Query: 5   CCAVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANL 64
           C A+REG+  A+E       +E DSLRV   L   Y+  +E  ++LD+VK   L      
Sbjct: 93  CFAIREGLAFAKESFLHVRMVETDSLRVVNAL-GRYDKYAEESLILDDVKCLLLEADDGS 152

Query: 65  VLFTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTECLVS 112
            +F  R+GN A+H+LA+ A+  +    WLEE P  IS ++++E LV+
Sbjct: 153 YMFILRNGNRASHTLARFALSLSSPLYWLEESPGCISHIVASELLVT 198

[Close]
BLAST of Lcy11g010470 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-13
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 7   AVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANLV- 66
           AV EG+ LA E GF  FQIE DSLR+  LLT    D SE+GVL   +K   LS  A  V 
Sbjct: 161 AVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVIK-LFLSSHAERVS 220

Query: 67  -LFTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTEC 109
             FT R+GN  AH LA+LA+     ++W+EEWP +IS +++ +C
Sbjct: 221 FSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVDC 263

[Close]
BLAST of Lcy11g010470 vs. NCBI nr
Match: XP_022135942.1 (uncharacterized protein LOC111007775 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 5.3e-11
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 0 

Query: 5   CCAVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANL 64
           C A +EGV LA E G  PFQIE DS +V  LL    ED SE+GVL   ++   +  S ++
Sbjct: 128 CLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESEIGVLASSIRH--IVSSLHI 187

Query: 65  ---VLFTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTE 108
                F  R GN  AH+LA++ M      VW+EEW  D+S +I+ +
Sbjct: 188 GGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVIAAD 231

[Close]
BLAST of Lcy11g010470 vs. NCBI nr
Match: XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia])

HSP 1 Score: 75.1 bits (183), Expect = 4.5e-10
Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = 0 

Query: 10  EGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANLVLFTR 69
           EG++LA ++G  P  +E DS R+  L + P EDLSE G ++ + K            F +
Sbjct: 94  EGLQLASKIGVNPVILETDSSRIFNLFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVK 153

Query: 70  RSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTECL 110
           R GN AAH LA+ A+      +W+E+WP ++   +  ECL
Sbjct: 154 REGNKAAHMLARRALLLREFSIWMEDWPLELKSCLEMECL 193

[Close]
BLAST of Lcy11g010470 vs. NCBI nr
Match: OMO99660.1 (hypothetical protein COLO4_13164 [Corchorus olitorius])

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-09
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 0 

Query: 5   CCAVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANL 64
           C A  + +  A+++GF    +E D+L + R +TA   D S +GV + E+K    S  + L
Sbjct: 198 CLAALKAITWAKDMGFNNIVLEGDALSIIRKVTASMPDFSPIGVYIAEIKVLSSSFVSCL 257

Query: 65  VLFTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTEC 109
                R GN+ AH LA L    +  R+W+EE P  I  ++ TEC
Sbjct: 258 FSHVHRDGNVIAHDLASLGSSLSETRIWIEEVPDSIVAVLQTEC 301

[Close]
BLAST of Lcy11g010470 vs. NCBI nr
Match: XP_023923041.1 (uncharacterized protein LOC112034451 [Quercus suber])

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-09
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 0 

Query: 7   AVREGVRLARELGFQPFQIEKDSLRVHRLLTAPYEDLSELGVLLDEVKRCGLSGSANLVL 66
           A  +   LAR+LGFQ   +E DSL + + L +  ++LS +G+L+D+VK  G S    +  
Sbjct: 110 AALKAASLARDLGFQNVILEGDSLCLIKALKSAEDNLSPIGLLVDDVKWVGRSFEQLVYS 169

Query: 67  FTRRSGNMAAHSLAKLAMDFALDRVWLEEWPRDISPMISTECLVS 112
             +R+GN  AHSLAK A+     +VW+E+ P  I+ ++  + +VS
Sbjct: 170 HVKRNGNSVAHSLAKNALRIPDSQVWMEDVPSHITSILDLDGIVS 214

The following BLAST results are available for this feature:
BLAST of Lcy11g010470 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy11g010470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DBJ79.4e-1448.08uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1C4672.5e-1141.51uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A6J1CIF12.2e-1036.00uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A1R3JXX01.1e-0934.62RNase H domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_13164... [more]
A0A2P5ENY92.4e-0937.38Ribonuclease H-like domain containing protein OS=Trema orientale OX=63057 GN=Tor... [more]
BLAST of Lcy11g010470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150944.11.9e-1348.08uncharacterized protein LOC111018973 [Momordica charantia][more]
XP_022135942.15.3e-1141.51uncharacterized protein LOC111007775 [Momordica charantia][more]
XP_022140628.14.5e-1036.00uncharacterized protein LOC111011237 [Momordica charantia][more]
OMO99660.12.2e-0934.62hypothetical protein COLO4_13164 [Corchorus olitorius][more]
XP_023923041.12.9e-0937.14uncharacterized protein LOC112034451 [Quercus suber][more]
BLAST of Lcy11g010470 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 6..83
e-value: 4.3E-7
score: 29.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 4..89
e-value: 5.0E-5
score: 25.2

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g010470.1Lcy11g010470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity