Lcy11g010180 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g010180
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein CURVATURE THYLAKOID 1D, chloroplastic-like
Location	Chr11: 11371996 .. 11374372 (+)
RNA-Seq Expression	Lcy11g010180
Synteny	Lcy11g010180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAATCTAAAACCCTAGCTCTGGAACACCTTACACCAAGCAAAGCAAGTGATGGGCCAGCAGAGTAATCTGGACTGGGGCGCTATATATGGCTCTCATCCTTCCATGGAACCCTAGCCTCTTCTCTTCTCCAATGTATAAGAAACACTCATTTCTTCACCATCGCCATTTCATCTTCCTAATTTCTCCGATTCTCCTCTCCGCCCATGGCCACCATTTCTGACCTCCCCGTTTTCTCCACTGCTCTCCCCGGAAACCCCCAGCTCCGTCCGAGGCCCGCTCTTCCTCTCCTGTTGCCCCTGCCCTCGCGCTCTCCTCGCGCCATCCACTTCCGTATGTTCTCGATTCATTACATTCTCACTCTGCCATCGAAAACGGATCCCTAGGTTGTCATTGTGGCGTTCTCTGCTTTTCACTTGAATTTCTCTGTGTTTCTTTTGTGGGTTTTTTAGTTTTTGGATCGCTTTATGCTTTCTGTCTGTGTCTGCATCGTTTTTGATCGGTTCTTCTGGTATATGATGTGCTGACGAGTAATTTCCTTTTGATGTTGGGGAGAAAGGGGAGGGGGTTGCATGTACGTGGTTTTGAAGGTTTTTGTTTTTTTTTTTGTTCTGAATTCTTTACTAGGACATCGTCGTTTTTCTGTTTCACTGCCGAGAGCTGCTGCTTCTGATGATTCATATGGATATAGTCCGTTAGTTACTGAAGAACGCGATAGCGTGACAGTCTTCGAAGATTCTCCTGCCGAGAAGCTTTCATCCGACGAAATTGCGACATCTGAAGTACCTAAAGAGGAGCCAGTTGAGGATGCGCCTGTGGTAATGTTGGAGGATTCTCCTTCTGCATCTTCAGCTACCGTGGAAGATTCTTCTTCTTCTGCTGAGAAGGTCGCGTACAATGAAATTGTGACATCTGAAGGGCCTAAAGAAGAACTTAAAGAAGAACCAGTTGAGAGTGCGCAAGAACAGGCGTTTGAATTATTGAATGATTTTAAAGTAAGAACTTTTATTGAAGCCATGTGTTATCTAATGAGTTTTTGCTATCTTTTTTTGATTTCAACAAATGATTGATTTATGCAAAGCTACTGATGCTCTTTTCAAATTTTTGAATCACTTTGGTTTTTGATTATTTATCTTTGCTTTCAATATCTTTCTGTGGTTTGGACCTCGGCTAGATTCCACTGCTCAATGCCTTGGGTATCTTGGACGGGGCTTTTTCCTTTTCTTTTTTTTTTAAGAAAATATATTTTGGGCTTTCTTTTTGCCCGCATGTGTTTTTCTTTCATTTCTCGTATTATTTTTTCAAAGTTAGTTGCAGTGATGATATCATCAAACTTGATAGTATATACCAATGCTATATGAAGCGTCGACAATTATATTGTCGACCTGAGCGGTTAATCGAGCAACCTAACTTCTCTACTTGCTTTTTTTTAGAAGTTGTATTTCTTGTCTTCGAATTTGTCTTTATTGATTCTTTTTGGGTTTGTATTGACTTAAATGTTCTGATGGTACAAGTTTTCCTTATAATATTTTGTTGTCCATCAAAGTTTCCTTCTCTTCAATCATAGGAAATTTAATATTTCAAAATGGAAATCAATATTTCCTGTAAAATTTTCAAACTTTTATCGCTTTGTCAATTTGGAAACACCATTTTGAAATAACAGTCAATGTACTTATCACTTATATATGTTTTCGTTTTCGTTTTGCAATTGCTTCATCATATGAAAGCTTTGATGATTACTTTTGCTTGCAGCTCGAGTCTGTTGATACATACAGTCTTGCCCTATATGGTGCTGGTGCTTTTTTTGGCATTTGGTTGGTTTCAGCCATTGTTGGTGCTGTTGATTCCATCCCATTGGTGAGTAGTTCTTACATCATCTTTGTAAGAGTCTGTATGTCCTTAGAGGGGGGGTCAATTGGTAAAGTTGTTGAGATAAACTTATAACCATTCATTTTTGTAATCTAGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGCTACTCAGTGTGGTTCACAGCTCGCTTTTTGTTATTCAAGGTAATTGCTTTGCTTAGAGTGGTTTGATCTGAATCCTGTATTTCCTTACTCCAAATACGTGATAATGAACCATTTCTTTTTGTTGTGACCTTTCAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGGTAAAGGAGCAGGTTATTGGTTCAGATTGATGACTGATTTGGTCGGAAATTTTTTTCTGTTATAGTAGGTAGTTTATCTTTGCATAGATAGCTGGATGTGCTTATGAATATATATATGATATAGATAATTACATTTTCTTTCCAATGGAGCACATATTATAGTGATAGATTCTTGTTTTACATATAGTTAGTTATGAATAAGAACAAG

mRNA sequence

CTCAATCTAAAACCCTAGCTCTGGAACACCTTACACCAAGCAAAGCAAGTGATGGGCCAGCAGAGTAATCTGGACTGGGGCGCTATATATGGCTCTCATCCTTCCATGGAACCCTAGCCTCTTCTCTTCTCCAATGTATAAGAAACACTCATTTCTTCACCATCGCCATTTCATCTTCCTAATTTCTCCGATTCTCCTCTCCGCCCATGGCCACCATTTCTGACCTCCCCGTTTTCTCCACTGCTCTCCCCGGAAACCCCCAGCTCCGTCCGAGGCCCGCTCTTCCTCTCCTGTTGCCCCTGCCCTCGCGCTCTCCTCGCGCCATCCACTTCCGACATCGTCGTTTTTCTGTTTCACTGCCGAGAGCTGCTGCTTCTGATGATTCATATGGATATAGTCCGTTAGTTACTGAAGAACGCGATAGCGTGACAGTCTTCGAAGATTCTCCTGCCGAGAAGCTTTCATCCGACGAAATTGCGACATCTGAAGTACCTAAAGAGGAGCCAGTTGAGGATGCGCCTGTGGTAATGTTGGAGGATTCTCCTTCTGCATCTTCAGCTACCGTGGAAGATTCTTCTTCTTCTGCTGAGAAGGTCGCGTACAATGAAATTGTGACATCTGAAGGGCCTAAAGAAGAACTTAAAGAAGAACCAGTTGAGAGTGCGCAAGAACAGGCGTTTGAATTATTGAATGATTTTAAACTCGAGTCTGTTGATACATACAGTCTTGCCCTATATGGTGCTGGTGCTTTTTTTGGCATTTGGTTGGTTTCAGCCATTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGCTACTCAGTGTGGTTCACAGCTCGCTTTTTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGGTAAAGGAGCAGGTTATTGGTTCAGATTGATGACTGATTTGGTCGGAAATTTTTTTCTGTTATAGTAGGTAGTTTATCTTTGCATAGATAGCTGGATGTGCTTATGAATATATATATGATATAGATAATTACATTTTCTTTCCAATGGAGCACATATTATAGTGATAGATTCTTGTTTTACATATAGTTAGTTATGAATAAGAACAAG

Coding sequence (CDS)

ATGGCCACCATTTCTGACCTCCCCGTTTTCTCCACTGCTCTCCCCGGAAACCCCCAGCTCCGTCCGAGGCCCGCTCTTCCTCTCCTGTTGCCCCTGCCCTCGCGCTCTCCTCGCGCCATCCACTTCCGACATCGTCGTTTTTCTGTTTCACTGCCGAGAGCTGCTGCTTCTGATGATTCATATGGATATAGTCCGTTAGTTACTGAAGAACGCGATAGCGTGACAGTCTTCGAAGATTCTCCTGCCGAGAAGCTTTCATCCGACGAAATTGCGACATCTGAAGTACCTAAAGAGGAGCCAGTTGAGGATGCGCCTGTGGTAATGTTGGAGGATTCTCCTTCTGCATCTTCAGCTACCGTGGAAGATTCTTCTTCTTCTGCTGAGAAGGTCGCGTACAATGAAATTGTGACATCTGAAGGGCCTAAAGAAGAACTTAAAGAAGAACCAGTTGAGAGTGCGCAAGAACAGGCGTTTGAATTATTGAATGATTTTAAACTCGAGTCTGTTGATACATACAGTCTTGCCCTATATGGTGCTGGTGCTTTTTTTGGCATTTGGTTGGTTTCAGCCATTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGCTACTCAGTGTGGTTCACAGCTCGCTTTTTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGGTAAAGGAGCAGGTTATTGGTTCAGATTGA

Protein sequence

MATISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGYSPLVTEERDSVTVFEDSPAEKLSSDEIATSEVPKEEPVEDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELLNDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFLLFKESRDELAAKIDEVKEQVIGSD

Homology

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BLAST of Lcy11g010180 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-22
Identity = 73/200 (36.50%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 46  RFSVSLPRAAASDDSYGYSPLVTEERDSVTVFEDSPAEKLSSDEIATSEVPKEEPVEDAP 105
           R +  +    AS + +GY    + +R S+ +  +  +  L S  +  S     E V +  
Sbjct: 6   RSTTIITHLPASFNGHGYLAGKSVDRISLPLQRNVASLVLQSRTLRCSRKFPGETVTE-- 65

Query: 106 VVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELLNDFK 165
               E S   +   VED            +V +E      +    E  + QA E LND K
Sbjct: 66  ----ETSTGVNEFGVEDRD--------GVVVAAEEKNSNSEAPQAEDEETQALEFLNDIK 125

Query: 166 LESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFLLFKE 225
           L+S  TYS+ LYG+GA   ++L SAIV ++++IPL PKL+E+VGLGY++WFT R+LLFK 
Sbjct: 126 LDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKR 185

Query: 226 SRDELAAKIDEVKEQVIGSD 246
           +R+EL  K+ E+K+QV+GSD
Sbjct: 186 NREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Lcy11g010180 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.3e-17
Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 151 ESAQEQAFELLNDFK-----LESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLL 210
           E++     EL+ D K     LE+  T  + +YG GA   +WL S +VGA++S+PL+PK++
Sbjct: 67  ETSSIDTNELITDLKEKWDGLENKST--VLIYGGGAIVAVWLSSIVVGAINSVPLLPKVM 126

Query: 211 EIVGLGYSVWFTARFLLFKESRDELAAKIDEVKEQVIGSD 246
           E+VGLGY+ WF  R+LLFK SR ELA  I+ +K+++ GS+
Sbjct: 127 ELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Lcy11g010180 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 5.9e-07
Identity = 39/144 (27.08%), Postives = 69/144 (47.92%), Query Frame = 0


Query: 107 VMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELLNDFKL 166
           + L   P  S      +++   K+  N +  +     E+ E P  + + +  EL    K 
Sbjct: 33  ISLPTLPIQSHTRAAKATAYCRKIVRNVVTRA---TTEVGEAPATTTEAETTELPEIVKT 92

Query: 167 -----ESV-DTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARF 226
                E V D Y++          +W  + ++ A+D +PLVP +LE+VG+GY+ WFT + 
Sbjct: 93  AQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKN 152

Query: 227 LLFKESRDELAAKIDEVKEQVIGS 245
           L+FK  R+ L  K+    + ++GS
Sbjct: 153 LVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Lcy11g010180 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 24/77 (31.17%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 167 ESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFLLFKES 226
           +S D   L   G      +W    ++ A+D +P++    E+VG+ +S WFT R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 227 RDELAAKIDEVKEQVIG 244
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

[Close]

BLAST of Lcy11g010180 vs. ExPASy Swiss-Prot
Match: Q119Z5 (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.6e-04
Identity = 48/198 (24.24%), Postives = 92/198 (46.46%), Query Frame = 0


Query: 64  SPLVTEERDSVTVFEDSPAEKLSSDEIATS---EVPKEEPVEDAPVVMLEDSPSASSATV 123
           +P  T+  ++ +V       ++++    TS   +V +   VE         +P A++ T 
Sbjct: 681 TPTATDVTENTSVETQETQSQITTPVATTSTATDVTENTSVETQETQSQITTPVATTPTA 740

Query: 124 EDSSSSAEKVA---YNEIVTSEGPKEELKEEPVESAQ-----EQAFELLNDF-----KLE 183
            D+ +  +KVA      I+  + P + +  + VE  Q     EQ   +  +F     +L 
Sbjct: 741 TDAETREQKVATQVETSILDDQKPVDTVTNQTVEVEQPNKIKEQFINIFFNFPDYINQLY 800

Query: 184 SVDTYSLALYG--AGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFLLFKE 243
                 L L+G  A        ++ ++ A+D IP++  + E++G+ Y VWF  R+LL + 
Sbjct: 801 QQYQGQLKLFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRS 860

[Close]

BLAST of Lcy11g010180 vs. ExPASy TrEMBL
Match: A0A6J1JJV3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.5e-82
Identity = 183/262 (69.85%), Postives = 197/262 (75.19%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FSVSLPRAAASDDSYG 
Sbjct: 11  ISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPRAAASDDSYGS 70

Query: 64  SPLVTEERDSVTVFEDS----------------------PAEKLSSDEIATSEVPKEEPV 123
           SP +TEERDS  V EDS                      P+E LSSDEI T EVPKEEPV
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPSENLSSDEIVTPEVPKEEPV 130

Query: 124 EDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELL 183
           EDAPVV +EDS SASSA+V D SSSAE VAYNE  T E PKEE KE+PVE AQE   + L
Sbjct: 131 EDAPVVAVEDSLSASSASVGD-SSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSL 190

Query: 184 NDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFL 243
           ND KLESVD YSLALYG GAFFG+WLVS +VGA DSIPLVPKLLEIVGLGY+VWF ARFL
Sbjct: 191 NDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFL 250

[Close]

BLAST of Lcy11g010180 vs. ExPASy TrEMBL
Match: A0A6J1FR86 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448041 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 6.4e-81
Identity = 182/262 (69.47%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FSVSLPRAAAS++SYG 
Sbjct: 11  ISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPRAAASEESYGS 70

Query: 64  SPLVTEERDSVTVFEDS----------------------PAEKLSSDEIATSEVPKEEPV 123
           SP +TEERDS  V EDS                      PAE LSSDEI T EVPKEEPV
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIVTPEVPKEEPV 130

Query: 124 EDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELL 183
           EDAPVV +EDS SASSATV D SSSAE VAYNE  T+E PKEE KE+PVE AQE   + L
Sbjct: 131 EDAPVVAVEDSLSASSATVGD-SSSAENVAYNETSTAEEPKEEPKEKPVEVAQEWTLDSL 190

Query: 184 NDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFL 243
            D KLESVD YSLALYG GA FG+WLVSA+VGAVDSIPLVPKLLEIVGLGY++WF ARFL
Sbjct: 191 IDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFL 250

[Close]

BLAST of Lcy11g010180 vs. ExPASy TrEMBL
Match: A0A6J1JNY2 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 8.4e-81
Identity = 183/273 (67.03%), Postives = 197/273 (72.16%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FSVSLPRAAASDDSYG 
Sbjct: 11  ISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPRAAASDDSYGS 70

Query: 64  SPLVTEERDSVTVFEDS---------------------------------PAEKLSSDEI 123
           SP +TEERDS  V EDS                                 P+E LSSDEI
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDSPPASSVAEENLPSENLSSDEI 130

Query: 124 ATSEVPKEEPVEDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPV 183
            T EVPKEEPVEDAPVV +EDS SASSA+V D SSSAE VAYNE  T E PKEE KE+PV
Sbjct: 131 VTPEVPKEEPVEDAPVVAVEDSLSASSASVGD-SSSAENVAYNETSTDEEPKEEPKEKPV 190

Query: 184 ESAQEQAFELLNDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGL 243
           E AQE   + LND KLESVD YSLALYG GAFFG+WLVS +VGA DSIPLVPKLLEIVGL
Sbjct: 191 EVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGL 250

[Close]

BLAST of Lcy11g010180 vs. ExPASy TrEMBL
Match: A0A6J1JR19 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.2e-79
Identity = 183/283 (64.66%), Postives = 197/283 (69.61%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FSVSLPRAAASDDSYG 
Sbjct: 11  ISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPRAAASDDSYGS 70

Query: 64  SPLVTEERDSVTVFEDS------------------------------------------- 123
           SP +TEERDS  V EDS                                           
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSPPASSVAEENL 130

Query: 124 PAEKLSSDEIATSEVPKEEPVEDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEG 183
           P+E LSSDEI T EVPKEEPVEDAPVV +EDS SASSA+V D SSSAE VAYNE  T E 
Sbjct: 131 PSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGD-SSSAENVAYNETSTDEE 190

Query: 184 PKEELKEEPVESAQEQAFELLNDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPL 243
           PKEE KE+PVE AQE   + LND KLESVD YSLALYG GAFFG+WLVS +VGA DSIPL
Sbjct: 191 PKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPL 250

[Close]

BLAST of Lcy11g010180 vs. ExPASy TrEMBL
Match: A0A6J1FXL3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448041 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.2e-79
Identity = 182/273 (66.67%), Postives = 198/273 (72.53%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FSVSLPRAAAS++SYG 
Sbjct: 11  ISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPRAAASEESYGS 70

Query: 64  SPLVTEERDSVTVFEDS---------------------------------PAEKLSSDEI 123
           SP +TEERDS  V EDS                                 PAE LSSDEI
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENLPAENLSSDEI 130

Query: 124 ATSEVPKEEPVEDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPV 183
            T EVPKEEPVEDAPVV +EDS SASSATV D SSSAE VAYNE  T+E PKEE KE+PV
Sbjct: 131 VTPEVPKEEPVEDAPVVAVEDSLSASSATVGD-SSSAENVAYNETSTAEEPKEEPKEKPV 190

Query: 184 ESAQEQAFELLNDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGL 243
           E AQE   + L D KLESVD YSLALYG GA FG+WLVSA+VGAVDSIPLVPKLLEIVGL
Sbjct: 191 EVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGL 250

[Close]

BLAST of Lcy11g010180 vs. NCBI nr
Match: XP_022990797.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 314.3 bits (804), Expect = 9.2e-82
Identity = 183/262 (69.85%), Postives = 197/262 (75.19%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FSVSLPRAAASDDSYG 
Sbjct: 11  ISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPRAAASDDSYGS 70

Query: 64  SPLVTEERDSVTVFEDS----------------------PAEKLSSDEIATSEVPKEEPV 123
           SP +TEERDS  V EDS                      P+E LSSDEI T EVPKEEPV
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPSENLSSDEIVTPEVPKEEPV 130

Query: 124 EDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELL 183
           EDAPVV +EDS SASSA+V D SSSAE VAYNE  T E PKEE KE+PVE AQE   + L
Sbjct: 131 EDAPVVAVEDSLSASSASVGD-SSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSL 190

Query: 184 NDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFL 243
           ND KLESVD YSLALYG GAFFG+WLVS +VGA DSIPLVPKLLEIVGLGY+VWF ARFL
Sbjct: 191 NDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFL 250

[Close]

BLAST of Lcy11g010180 vs. NCBI nr
Match: KAG6600663.1 (Protein CURVATURE THYLAKOID 1D, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311.2 bits (796), Expect = 7.8e-81
Identity = 182/262 (69.47%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N QLRP+ ALPL +P+ SR  R +HFR+R FSVSLPRAAASD+SYG 
Sbjct: 11  ISDLPVSSPLLARNQQLRPKHALPLKMPVASRLARGVHFRYRHFSVSLPRAAASDESYGS 70

Query: 64  SPLVTEERDSVTVFEDS----------------------PAEKLSSDEIATSEVPKEEPV 123
           SP +TEERDS  V EDS                      PAE LSSDEI T EVPKEEPV
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIVTPEVPKEEPV 130

Query: 124 EDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELL 183
           EDAPVV +EDS SASSATV D S SAE VAYNE  T+E PKEE KE+PVE AQE   + L
Sbjct: 131 EDAPVVAVEDSLSASSATVGD-SLSAENVAYNETSTAEEPKEEPKEKPVEVAQEWTLDSL 190

Query: 184 NDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFL 243
            D KLESVD YSLALYG GA FG+WLVSA+VGAVDSIPLVPKLLEIVGLGY++WF ARFL
Sbjct: 191 IDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFL 250

[Close]

BLAST of Lcy11g010180 vs. NCBI nr
Match: XP_022943256.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-80
Identity = 182/262 (69.47%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FSVSLPRAAAS++SYG 
Sbjct: 11  ISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPRAAASEESYGS 70

Query: 64  SPLVTEERDSVTVFEDS----------------------PAEKLSSDEIATSEVPKEEPV 123
           SP +TEERDS  V EDS                      PAE LSSDEI T EVPKEEPV
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIVTPEVPKEEPV 130

Query: 124 EDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELL 183
           EDAPVV +EDS SASSATV D SSSAE VAYNE  T+E PKEE KE+PVE AQE   + L
Sbjct: 131 EDAPVVAVEDSLSASSATVGD-SSSAENVAYNETSTAEEPKEEPKEKPVEVAQEWTLDSL 190

Query: 184 NDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFL 243
            D KLESVD YSLALYG GA FG+WLVSA+VGAVDSIPLVPKLLEIVGLGY++WF ARFL
Sbjct: 191 IDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFL 250

[Close]

BLAST of Lcy11g010180 vs. NCBI nr
Match: XP_022990791.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 310.1 bits (793), Expect = 1.7e-80
Identity = 183/273 (67.03%), Postives = 197/273 (72.16%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FSVSLPRAAASDDSYG 
Sbjct: 11  ISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPRAAASDDSYGS 70

Query: 64  SPLVTEERDSVTVFEDS---------------------------------PAEKLSSDEI 123
           SP +TEERDS  V EDS                                 P+E LSSDEI
Sbjct: 71  SPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDSPPASSVAEENLPSENLSSDEI 130

Query: 124 ATSEVPKEEPVEDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPV 183
            T EVPKEEPVEDAPVV +EDS SASSA+V D SSSAE VAYNE  T E PKEE KE+PV
Sbjct: 131 VTPEVPKEEPVEDAPVVAVEDSLSASSASVGD-SSSAENVAYNETSTDEEPKEEPKEKPV 190

Query: 184 ESAQEQAFELLNDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGL 243
           E AQE   + LND KLESVD YSLALYG GAFFG+WLVS +VGA DSIPLVPKLLEIVGL
Sbjct: 191 EVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGL 250

[Close]

BLAST of Lcy11g010180 vs. NCBI nr
Match: XP_023552927.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.9e-79
Identity = 181/262 (69.08%), Postives = 195/262 (74.43%), Query Frame = 0


Query: 4   ISDLPVFSTALPGNPQLRPRPALPLLLPLPSRSPRAIHFRHRRFSVSLPRAAASDDSYGY 63
           ISDLPV S  L  N  LRP+ ALPL +P+ SR  R IHFR+R FS SLPRAAASDDSYG 
Sbjct: 11  ISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPRAAASDDSYGS 70

Query: 64  SPLVTEERDSVTVFEDS----------------------PAEKLSSDEIATSEVPKEEPV 123
           S  +TEERDS  V EDS                      PAE LSSDEI   EVPKEEPV
Sbjct: 71  SSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIVKPEVPKEEPV 130

Query: 124 EDAPVVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELL 183
           EDAPVV +EDS SASSATV D SSSAE VAY E  T+E PKEE KE+PVE AQE   + L
Sbjct: 131 EDAPVVAVEDSLSASSATVGD-SSSAENVAYKETSTAEEPKEEPKEKPVEVAQEWTLDSL 190

Query: 184 NDFKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFL 243
           ND KLESVD YSLALYG GA FG+WLVSA+VGAVDSIPLVPKLLEIVGLGY++WF ARFL
Sbjct: 191 NDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFL 250

[Close]

BLAST of Lcy11g010180 vs. TAIR 10
Match: AT4G38100.1 (unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 7.2e-24
Identity = 73/200 (36.50%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 46  RFSVSLPRAAASDDSYGYSPLVTEERDSVTVFEDSPAEKLSSDEIATSEVPKEEPVEDAP 105
           R +  +    AS + +GY    + +R S+ +  +  +  L S  +  S     E V +  
Sbjct: 6   RSTTIITHLPASFNGHGYLAGKSVDRISLPLQRNVASLVLQSRTLRCSRKFPGETVTE-- 65

Query: 106 VVMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELLNDFK 165
               E S   +   VED            +V +E      +    E  + QA E LND K
Sbjct: 66  ----ETSTGVNEFGVEDRD--------GVVVAAEEKNSNSEAPQAEDEETQALEFLNDIK 125

Query: 166 LESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFLLFKE 225
           L+S  TYS+ LYG+GA   ++L SAIV ++++IPL PKL+E+VGLGY++WFT R+LLFK 
Sbjct: 126 LDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKR 185

Query: 226 SRDELAAKIDEVKEQVIGSD 246
           +R+EL  K+ E+K+QV+GSD
Sbjct: 186 NREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Lcy11g010180 vs. TAIR 10
Match: AT4G01150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 5.9e-18
Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 151 ESAQEQAFELLNDFK-----LESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLL 210
           E++     EL+ D K     LE+  T  + +YG GA   +WL S +VGA++S+PL+PK++
Sbjct: 67  ETSSIDTNELITDLKEKWDGLENKST--VLIYGGGAIVAVWLSSIVVGAINSVPLLPKVM 126

Query: 211 EIVGLGYSVWFTARFLLFKESRDELAAKIDEVKEQVIGSD 246
           E+VGLGY+ WF  R+LLFK SR ELA  I+ +K+++ GS+
Sbjct: 127 ELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Lcy11g010180 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08
Identity = 39/144 (27.08%), Postives = 69/144 (47.92%), Query Frame = 0


Query: 107 VMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELLNDFKL 166
           + L   P  S      +++   K+  N +  +     E+ E P  + + +  EL    K 
Sbjct: 33  ISLPTLPIQSHTRAAKATAYCRKIVRNVVTRA---TTEVGEAPATTTEAETTELPEIVKT 92

Query: 167 -----ESV-DTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARF 226
                E V D Y++          +W  + ++ A+D +PLVP +LE+VG+GY+ WFT + 
Sbjct: 93  AQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKN 152

Query: 227 LLFKESRDELAAKIDEVKEQVIGS 245
           L+FK  R+ L  K+    + ++GS
Sbjct: 153 LVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Lcy11g010180 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08
Identity = 39/144 (27.08%), Postives = 69/144 (47.92%), Query Frame = 0


Query: 107 VMLEDSPSASSATVEDSSSSAEKVAYNEIVTSEGPKEELKEEPVESAQEQAFELLNDFKL 166
           + L   P  S      +++   K+  N +  +     E+ E P  + + +  EL    K 
Sbjct: 33  ISLPTLPIQSHTRAAKATAYCRKIVRNVVTRA---TTEVGEAPATTTEAETTELPEIVKT 92

Query: 167 -----ESV-DTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARF 226
                E V D Y++          +W  + ++ A+D +PLVP +LE+VG+GY+ WFT + 
Sbjct: 93  AQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKN 152

Query: 227 LLFKESRDELAAKIDEVKEQVIGS 245
           L+FK  R+ L  K+    + ++GS
Sbjct: 153 LVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Lcy11g010180 vs. TAIR 10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 24/77 (31.17%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 167 ESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEIVGLGYSVWFTARFLLFKES 226
           +S D   L   G      +W    ++ A+D +P++    E+VG+ +S WFT R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 227 RDELAAKIDEVKEQVIG 244
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

The following BLAST results are available for this feature:

BLAST of Lcy11g010180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDD3	1.0e-22	36.50	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O04616	8.3e-17	45.00	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LCA1	5.9e-07	27.08	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M812	1.5e-05	31.17	Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q119Z5	3.6e-04	24.24	Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=...	[more]

BLAST of Lcy11g010180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJV3	4.5e-82	69.85	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxim...	[more]
A0A6J1FR86	6.4e-81	69.47	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1JNY2	8.4e-81	67.03	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1JR19	1.2e-79	64.66	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1FXL3	1.2e-79	66.67	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita mosch...	[more]

BLAST of Lcy11g010180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990797.1	9.2e-82	69.85	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima]	[more]
KAG6600663.1	7.8e-81	69.47	Protein CURVATURE THYLAKOID 1D, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_022943256.1	1.3e-80	69.47	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschat...	[more]
XP_022990791.1	1.7e-80	67.03	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita maxima]	[more]
XP_023552927.1	1.9e-79	69.08	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy11g010180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38100.1	7.2e-24	36.50	unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 pl...	[more]
AT4G01150.1	5.9e-18	45.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G46820.1	4.2e-08	27.08	photosystem I P subunit	[more]
AT2G46820.2	4.2e-08	27.08	photosystem I P subunit	[more]
AT1G52220.1	1.0e-06	31.17	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 170..243 e-value: 5.7E-24 score: 83.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..101
None	No IPR available	PANTHER	PTHR33222:SF2	PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTIC	coord: 56..244
IPR033344	Protein CURVATURE THYLAKOID 1	PANTHER	PTHR33222	FAMILY NOT NAMED	coord: 56..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g010180.1	Lcy11g010180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009579	thylakoid