Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGTCATCAGCTCTGCCATCCTCCGCCGCCATCAGCGGAAGAATCCGGCGGCGTATTCATTCTCTTCTTCTTCATCGGCTAATAAATGCGGCTGCACATTGTATTCCGTTCGGTTTGTTTCCCATTCTTCAGCGTCCAAAGCACACTCATTAAAATCAATCCCCGCCATTGCCAAAGCTTCCAAAGAAACTGACATTGATATCACAAAGCTGTTGGGTGCTTCTTTAATTTTTAGAACAAAACCAAACAAGAAAAACTCTTGACTTTTTTTATTCATCGTTTTAGGGGGTTAATTGGAAGAAAATTGTATTTTAAAAAAAAAATTTGCAAAAACGAGTTGCTTTGGAAAAAATTAGGAAAAACGAGTAGTTTTTTTGTCGTTTTTGCTTTCCGCGTCTTCTAGACGCGGAAAGAGAAAAGTTTCCGTGGGTTCAACCCACGGAAACAGCCCAGCTGACTGGTCATGTTGACCAGTCAGCGAAATATGTGTGGATCCGTGGGTTGAACCCACGGATCCATTATTTTATATTTTTTTTAAAAAAAATTTTCAGTTCAAATATTTGTTATACTCTGAACGGTACGTCACATCGCTGACGGAATGATGTGACGTGACCGAACTTCTGAATTCCATCTGCTTTCTTCTTCTTTTTTTTTTCTTTTTTTTTTTTTTTTTAAGTTGACCATTGCATGCAATGGTCATCGGGAAGTGACGCGCCGCTGTCAAGATTCCTGACACGGCGGCGCGTCACGTCGGTCAGATGGATGTTGACCAATTTTTTTTTTTTTTCCCGAAAAATGTCATTTTAAACCCCTCCACTCTCCCTTATTTTCTCACTCTCGTTTTCTCCTTACAGCTTTCTTCCTTGCCCCTTCCAACAGCCTTCCTTATCATTCTCCTTAACTCTTTTTTGCTTCTTCTGGTTTTCATTCTCTCCATTAACTCCAGTTCACTTTATTATTGTGTAAGTTTTTTTTTCGAGTTCATTTTAAGTTCTGTAATGGTTTTTGTTTATTTATGTTTATAGTTCATATAAAGTGTTTTTAATCTTTTTTTTTTTTTTTTATCTTCATCTCTACCTATTAGGATTGATATTGGTTATTATAGAGCGAGATTGTTTAAATTTCAGTGGATGCTCGCCAAGAAGCCACGAGAAAAATCGGTATTGTTAGTTGATTTTACTTAAATAATATGTTTTTTTTGTTTAGGCAAATTAATAACATGTTTTGTTATTTGGACAACAGCGACCATAGAAACAACCAAACAACGAGTTCTTTTTCAAAAATAAGGTTAGTTTTTTAAATTTGAATTTTGGAAGGTTTTTTTTTCTTTTACGACTAAATGTAATAATATGTATCGTTTTTTGTTTATTTTTACACAACCTATCACATTTGGTGGTGGGTAAAAGGAAAAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGACGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCAAACAATGACTGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTAATATTCCATGAATCATTACAAGTTAAATCGAATGTTTACGCTTGTACGAGATAGAGTAATAACTTTTCCTATACTTTTTAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACATGCCATTGCTGCATGTAAAGAACGTTGTATAGATTACTTAAGTCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGAGGTCCCAACACGTCACCGTAG
mRNA sequence
ATGAACGTCATCAGCTCTGCCATCCTCCGCCGCCATCAGCGGAAGAATCCGGCGGCGTATTCATTCTCTTCTTCTTCATCGGCTAATAAATGCGGCTGCACATTGTATTCCGTTCGGAAAAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGACGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCAAACAATGACTGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACATGCCATTGCTGCATGTAAAGAACGTTGTATAGATTACTTAAGTCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGAGGTCCCAACACGTCACCGTAG
Coding sequence (CDS)
ATGAACGTCATCAGCTCTGCCATCCTCCGCCGCCATCAGCGGAAGAATCCGGCGGCGTATTCATTCTCTTCTTCTTCATCGGCTAATAAATGCGGCTGCACATTGTATTCCGTTCGGAAAAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGACGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCAAACAATGACTGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACATGCCATTGCTGCATGTAAAGAACGTTGTATAGATTACTTAAGTCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGAGGTCCCAACACGTCACCGTAG
Protein sequence
MNVISSAILRRHQRKNPAAYSFSSSSSANKCGCTLYSVRKNLCLISDRHKGIIAAVRNASNGWADAEHRFCLRHVASNFNERYKDKSLKKLVYRAGAQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRNEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSP
Homology
BLAST of Lcy11g009930 vs. ExPASy TrEMBL
Match:
A0A438EWG2 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 PE=4 SV=1)
HSP 1 Score: 405.6 bits (1041), Expect = 2.2e-109
Identity = 189/362 (52.21%), Postives = 246/362 (67.96%), Query Frame = 0
Query: 17 PAAYSFSSSSSANKCGCTLY------SVRKNLCLISDRHKGIIAAVRNASNGWAD--AEH 76
P A++ S++ LY + R+ +CLISDRH GI AA+R+ S GW+ A H
Sbjct: 430 PLAFAIVEEESSDSWSWFLYILRTQVTQREGICLISDRHAGIQAAIRDPSVGWSPPYAHH 489
Query: 77 RFCLRHVASNFNERYKDKSLKKLVYRAGAQFQVDKYKDCMAELEVANNDCLRFFNSLDPK 136
R+CLRHVASNFN++Y++K LK LVYRAG+Q Q KY+ CM EL+ ++ CL +F LD K
Sbjct: 490 RYCLRHVASNFNDKYRNKMLKDLVYRAGSQHQPRKYEACMTELKRLDDKCLEWFKRLDTK 549
Query: 137 QWTQSHDGGYRYGWLTTNVAECVNGIFKGARKLPIAALVEATFYRTVNYFAKRRIEIEAS 196
+WT +HDGG+RYGW+TTN+AEC+NG+ KGAR LPI ALV TFYR V+YF RR EI+
Sbjct: 550 KWTLAHDGGHRYGWMTTNIAECINGVLKGARMLPITALVRLTFYRCVSYFETRRTEIQTQ 609
Query: 197 IQEGQRFTRYAIEKLTTWEERANRHDVNVFDYGRGRCDITTAIDPITL-KGGTKHRVRLI 256
+ G +T YAI K+T ++ RAN H N+F ++TTA + KG V+L
Sbjct: 610 MANGDLYTSYAINKITKYQSRANGHTANIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLK 669
Query: 257 EKTCTCNKWQSFKIPCSHAIAACKERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRW 316
E+TCTCNKWQSF IPCSH +A C ID +D HY + Y CY PQF PIP + W
Sbjct: 670 ERTCTCNKWQSFGIPCSHVLAVCARARIDSWQFVDKHYRMDVYACCYTPQFNPIPHQAYW 729
Query: 317 PDPGFPKIYPDPSSLRAHGRPCSSRIRNEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPN 370
P+P FP ++P+P+ +R GRP SSRIRNEMDW EP VK RCG+C+QEGHNRR CP+RG +
Sbjct: 730 PEPNFPIVHPNPNLVRDKGRPRSSRIRNEMDWREPSVKLRCGLCKQEGHNRRKCPNRGES 789
BLAST of Lcy11g009930 vs. ExPASy TrEMBL
Match:
A0A438KDW5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 PE=4 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 6.5e-109
Identity = 184/339 (54.28%), Postives = 237/339 (69.91%), Query Frame = 0
Query: 34 TLYSVRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKL 93
T + R+ +CLISDRH GI AA+R+ S GW+ A HR+CLRHVASNFN++Y++K LK L
Sbjct: 426 TQVTQREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDL 485
Query: 94 VYRAGAQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECV 153
VYRAG+Q Q KY+ CM EL+ ++ CL +F LD K+WT +HDGG+RYGW+TTN+ EC+
Sbjct: 486 VYRAGSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIVECI 545
Query: 154 NGIFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERAN 213
NG+ KGAR LPI ALV TFYR V+YF RR EI+ + G +T YAI K+T ++ RAN
Sbjct: 546 NGVLKGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRAN 605
Query: 214 RHDVNVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAAC 273
H N+F ++TTA + KG V+L E+TCTCNKWQSF IPCSH +A C
Sbjct: 606 GHTANIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVC 665
Query: 274 KERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCS 333
ID +D HY + Y CY PQF PIP + WP+P FP ++P+P+ +R GRP S
Sbjct: 666 ARARIDSWQFVDKHYRMEVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRS 725
Query: 334 SRIRNEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTS 370
SRIRNEMDW EP VK RCG+C+QEGHNRR CP+RG +++
Sbjct: 726 SRIRNEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSN 764
BLAST of Lcy11g009930 vs. ExPASy TrEMBL
Match:
A0A438HFK5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 PE=4 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98
Identity = 178/337 (52.82%), Postives = 232/337 (68.84%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRAG 98
R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRAG
Sbjct: 513 REGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAG 572
Query: 99 AQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFK 158
Q Q KY+ M EL+ + + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ K
Sbjct: 573 CQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLK 632
Query: 159 GARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVN 218
GAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 633 GARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTVT 692
Query: 219 VFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCI 278
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A I
Sbjct: 693 IFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMRI 752
Query: 279 DYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRN 338
D L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIRN
Sbjct: 753 DSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIRN 812
Query: 339 EMDWTEPVVKTRCGICRQEGHNRRNCPSR--GPNTSP 371
EMD EP V+ RCG+C+ GHNRRNCP++ G +++P
Sbjct: 813 EMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSSNP 849
BLAST of Lcy11g009930 vs. ExPASy TrEMBL
Match:
A0A438FUH8 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_057381 PE=4 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98
Identity = 178/337 (52.82%), Postives = 232/337 (68.84%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRAG 98
R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRAG
Sbjct: 343 REGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAG 402
Query: 99 AQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFK 158
Q Q KY+ M EL+ + + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ K
Sbjct: 403 CQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLK 462
Query: 159 GARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVN 218
GAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 463 GARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTTYAIEKFRRAEAKASGHTVT 522
Query: 219 VFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCI 278
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A I
Sbjct: 523 IFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMRI 582
Query: 279 DYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRN 338
D L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIRN
Sbjct: 583 DSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIRN 642
Query: 339 EMDWTEPVVKTRCGICRQEGHNRRNCPSR--GPNTSP 371
EMD EP V+ RCG+C+ GHNRRNCP++ G +++P
Sbjct: 643 EMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSSNP 679
BLAST of Lcy11g009930 vs. ExPASy TrEMBL
Match:
A0A438E570 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_079903 PE=4 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98
Identity = 178/337 (52.82%), Postives = 232/337 (68.84%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRAG 98
R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRAG
Sbjct: 310 REGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAG 369
Query: 99 AQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFK 158
Q Q KY+ M EL+ + + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ K
Sbjct: 370 CQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLK 429
Query: 159 GARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVN 218
GAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 430 GARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTVT 489
Query: 219 VFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCI 278
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A I
Sbjct: 490 IFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMRI 549
Query: 279 DYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRN 338
D L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIRN
Sbjct: 550 DSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIRN 609
Query: 339 EMDWTEPVVKTRCGICRQEGHNRRNCPSR--GPNTSP 371
EMD EP V+ RCG+C+ GHNRRNCP++ G +++P
Sbjct: 610 EMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSSNP 646
BLAST of Lcy11g009930 vs. NCBI nr
Match:
RVW52006.1 (hypothetical protein CK203_068088 [Vitis vinifera])
HSP 1 Score: 405.6 bits (1041), Expect = 4.6e-109
Identity = 189/362 (52.21%), Postives = 246/362 (67.96%), Query Frame = 0
Query: 17 PAAYSFSSSSSANKCGCTLY------SVRKNLCLISDRHKGIIAAVRNASNGWAD--AEH 76
P A++ S++ LY + R+ +CLISDRH GI AA+R+ S GW+ A H
Sbjct: 430 PLAFAIVEEESSDSWSWFLYILRTQVTQREGICLISDRHAGIQAAIRDPSVGWSPPYAHH 489
Query: 77 RFCLRHVASNFNERYKDKSLKKLVYRAGAQFQVDKYKDCMAELEVANNDCLRFFNSLDPK 136
R+CLRHVASNFN++Y++K LK LVYRAG+Q Q KY+ CM EL+ ++ CL +F LD K
Sbjct: 490 RYCLRHVASNFNDKYRNKMLKDLVYRAGSQHQPRKYEACMTELKRLDDKCLEWFKRLDTK 549
Query: 137 QWTQSHDGGYRYGWLTTNVAECVNGIFKGARKLPIAALVEATFYRTVNYFAKRRIEIEAS 196
+WT +HDGG+RYGW+TTN+AEC+NG+ KGAR LPI ALV TFYR V+YF RR EI+
Sbjct: 550 KWTLAHDGGHRYGWMTTNIAECINGVLKGARMLPITALVRLTFYRCVSYFETRRTEIQTQ 609
Query: 197 IQEGQRFTRYAIEKLTTWEERANRHDVNVFDYGRGRCDITTAIDPITL-KGGTKHRVRLI 256
+ G +T YAI K+T ++ RAN H N+F ++TTA + KG V+L
Sbjct: 610 MANGDLYTSYAINKITKYQSRANGHTANIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLK 669
Query: 257 EKTCTCNKWQSFKIPCSHAIAACKERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRW 316
E+TCTCNKWQSF IPCSH +A C ID +D HY + Y CY PQF PIP + W
Sbjct: 670 ERTCTCNKWQSFGIPCSHVLAVCARARIDSWQFVDKHYRMDVYACCYTPQFNPIPHQAYW 729
Query: 317 PDPGFPKIYPDPSSLRAHGRPCSSRIRNEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPN 370
P+P FP ++P+P+ +R GRP SSRIRNEMDW EP VK RCG+C+QEGHNRR CP+RG +
Sbjct: 730 PEPNFPIVHPNPNLVRDKGRPRSSRIRNEMDWREPSVKLRCGLCKQEGHNRRKCPNRGES 789
BLAST of Lcy11g009930 vs. NCBI nr
Match:
RVX19406.1 (hypothetical protein CK203_008540 [Vitis vinifera])
HSP 1 Score: 404.1 bits (1037), Expect = 1.3e-108
Identity = 184/339 (54.28%), Postives = 237/339 (69.91%), Query Frame = 0
Query: 34 TLYSVRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKL 93
T + R+ +CLISDRH GI AA+R+ S GW+ A HR+CLRHVASNFN++Y++K LK L
Sbjct: 426 TQVTQREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDL 485
Query: 94 VYRAGAQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECV 153
VYRAG+Q Q KY+ CM EL+ ++ CL +F LD K+WT +HDGG+RYGW+TTN+ EC+
Sbjct: 486 VYRAGSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIVECI 545
Query: 154 NGIFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERAN 213
NG+ KGAR LPI ALV TFYR V+YF RR EI+ + G +T YAI K+T ++ RAN
Sbjct: 546 NGVLKGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRAN 605
Query: 214 RHDVNVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAAC 273
H N+F ++TTA + KG V+L E+TCTCNKWQSF IPCSH +A C
Sbjct: 606 GHTANIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVC 665
Query: 274 KERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCS 333
ID +D HY + Y CY PQF PIP + WP+P FP ++P+P+ +R GRP S
Sbjct: 666 ARARIDSWQFVDKHYRMEVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRS 725
Query: 334 SRIRNEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTS 370
SRIRNEMDW EP VK RCG+C+QEGHNRR CP+RG +++
Sbjct: 726 SRIRNEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSN 764
BLAST of Lcy11g009930 vs. NCBI nr
Match:
RVW83159.1 (hypothetical protein CK203_044939 [Vitis vinifera])
HSP 1 Score: 369.0 bits (946), Expect = 4.8e-98
Identity = 178/337 (52.82%), Postives = 232/337 (68.84%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRAG 98
R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRAG
Sbjct: 513 REGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAG 572
Query: 99 AQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFK 158
Q Q KY+ M EL+ + + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ K
Sbjct: 573 CQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLK 632
Query: 159 GARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVN 218
GAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 633 GARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTVT 692
Query: 219 VFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCI 278
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A I
Sbjct: 693 IFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMRI 752
Query: 279 DYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRN 338
D L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIRN
Sbjct: 753 DSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIRN 812
Query: 339 EMDWTEPVVKTRCGICRQEGHNRRNCPSR--GPNTSP 371
EMD EP V+ RCG+C+ GHNRRNCP++ G +++P
Sbjct: 813 EMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSSNP 849
BLAST of Lcy11g009930 vs. NCBI nr
Match:
RVW42770.1 (hypothetical protein CK203_079903 [Vitis vinifera])
HSP 1 Score: 369.0 bits (946), Expect = 4.8e-98
Identity = 178/337 (52.82%), Postives = 232/337 (68.84%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRAG 98
R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRAG
Sbjct: 310 REGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAG 369
Query: 99 AQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFK 158
Q Q KY+ M EL+ + + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ K
Sbjct: 370 CQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLK 429
Query: 159 GARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVN 218
GAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 430 GARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTVT 489
Query: 219 VFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCI 278
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A I
Sbjct: 490 IFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMRI 549
Query: 279 DYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRN 338
D L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIRN
Sbjct: 550 DSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIRN 609
Query: 339 EMDWTEPVVKTRCGICRQEGHNRRNCPSR--GPNTSP 371
EMD EP V+ RCG+C+ GHNRRNCP++ G +++P
Sbjct: 610 EMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSSNP 646
BLAST of Lcy11g009930 vs. NCBI nr
Match:
RVW63588.1 (hypothetical protein CK203_057381 [Vitis vinifera])
HSP 1 Score: 369.0 bits (946), Expect = 4.8e-98
Identity = 178/337 (52.82%), Postives = 232/337 (68.84%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRAG 98
R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRAG
Sbjct: 343 REGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAG 402
Query: 99 AQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFK 158
Q Q KY+ M EL+ + + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ K
Sbjct: 403 CQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLK 462
Query: 159 GARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVN 218
GAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 463 GARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTTYAIEKFRRAEAKASGHTVT 522
Query: 219 VFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCI 278
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A I
Sbjct: 523 IFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMRI 582
Query: 279 DYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRN 338
D L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIRN
Sbjct: 583 DSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIRN 642
Query: 339 EMDWTEPVVKTRCGICRQEGHNRRNCPSR--GPNTSP 371
EMD EP V+ RCG+C+ GHNRRNCP++ G +++P
Sbjct: 643 EMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSSNP 679
BLAST of Lcy11g009930 vs. TAIR 10
Match:
AT1G49920.1 (MuDR family transposase )
HSP 1 Score: 134.8 bits (338), Expect = 1.4e-31
Identity = 86/289 (29.76%), Postives = 140/289 (48.44%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYK--DKSLKKLVYR 98
R+ +CLIS I+A + + W + A HRFCL H+ S D ++ LV
Sbjct: 439 RQGICLISSPDPDILAVINEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDE 498
Query: 99 AGAQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGI 158
AG+ Q +++ M E++ N + ++ + P QW +HD G RYG + + E + +
Sbjct: 499 AGSSSQKEEFDSYMKEIKERNPEAWKWLDQFPPHQWALAHDDGRRYGIMRID-TEALFAV 558
Query: 159 FKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHD 218
K RK+ +A V F + + FA+ S++ G +T + +EKL +E ++
Sbjct: 559 CKRFRKVAMAGGVMLLFGQLKDAFAESFKLSRGSLKHGDVYTEHVMEKLEEFETDSDTWV 618
Query: 219 VNVFDYGRGRCDITTAIDPITLKGG-----TKHRVRLIEKTCTCNKWQSFKIPCSHAIAA 278
+ + R ++ A T G T V+L + TCTC ++Q K PC HA+A
Sbjct: 619 ITITPLERDAYQVSMAPKKKTRLMGQSNDSTSGIVQLNDTTCTCGEFQKNKFPCLHALAV 678
Query: 279 CKERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDP-GFPKIYP 318
C E I+ L +D Y + Y Y+ +F P+PE S WP+ G P + P
Sbjct: 679 CDELKINPLQYVDDCYTVERYHKTYSAKFSPVPELSAWPEAYGVPTLIP 726
BLAST of Lcy11g009930 vs. TAIR 10
Match:
AT1G64260.1 (MuDR family transposase )
HSP 1 Score: 122.5 bits (306), Expect = 7.2e-28
Identity = 80/289 (27.68%), Postives = 142/289 (49.13%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRAG 98
RK+LCLIS + I+A V + W + A H+FCL H+ S F ++D +L+ LV +AG
Sbjct: 436 RKDLCLISSPLRDIVAVVNEPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAG 495
Query: 99 AQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFK 158
+ Q +++ M +++ N + ++ + + +W +HD G RYG + + E + + +
Sbjct: 496 STNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHKWALAHDSGLRYGIIEID-REALFAVCR 555
Query: 159 GARKLPIAAL--VEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHD 218
G +A V F + F K I +S+ G +T ++KL + + +
Sbjct: 556 GFPYCTVAMTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYV 615
Query: 219 VNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 278
+ + R ++ + + + V+L TCTC K+QS+K PC HA+A ++
Sbjct: 616 ITQLE--RDSFKVSESSEK------EEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKLK 675
Query: 279 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWP-DPGFPKIYPDPSSL 323
I+ L +D Y + Y YA F P+P+ + WP D P ++P L
Sbjct: 676 INPLQYVDECYTVEQYCKTYAATFSPVPDVAAWPEDCRVPTLFPPSQQL 715
BLAST of Lcy11g009930 vs. TAIR 10
Match:
AT1G64255.1 (MuDR family transposase )
HSP 1 Score: 121.3 bits (303), Expect = 1.6e-27
Identity = 84/284 (29.58%), Postives = 130/284 (45.77%), Query Frame = 0
Query: 39 RKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRAG 98
RK LCLIS H IIA V + + W + A HRF L H S F+ + L + RAG
Sbjct: 443 RKGLCLISSPHPDIIAVVNESGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRAG 502
Query: 99 AQFQVDKYKDCMAELEVANNDCLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAE--CVNGI 158
+ Q D++ M +++ N + ++ + +W +HD G RYG + N V
Sbjct: 503 STSQKDEFVSYMNDIKEKNPEARKWLDQFPQNRWALAHDNGRRYGIMEINTKALFAVCNA 562
Query: 159 FKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHD 218
F+ A + + V F + F K +S+ G +T ++KL + +
Sbjct: 563 FEQAGHV-VTGSVLLLFDELRSKFDKSFSCSRSSLNCGDVYTEPVMDKLEEFRTTFVTYS 622
Query: 219 VNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 278
V + TA+D KG + V+L + +CTC +Q +K PC HA+A CK+
Sbjct: 623 YIVTPLDNNAFQVATALD----KG--ECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLK 682
Query: 279 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPD-PGFPKIYP 318
+ L +D Y L YA F +PE S WP+ G P++ P
Sbjct: 683 FNPLQYVDDCYTLERLKRTYATIFSHVPEMSAWPEASGVPRLLP 719
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A438EWG2 | 2.2e-109 | 52.21 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 P... | [more] |
A0A438KDW5 | 6.5e-109 | 54.28 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 P... | [more] |
A0A438HFK5 | 2.3e-98 | 52.82 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 P... | [more] |
A0A438FUH8 | 2.3e-98 | 52.82 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_057381 P... | [more] |
A0A438E570 | 2.3e-98 | 52.82 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_079903 P... | [more] |
Match Name | E-value | Identity | Description | |
RVW52006.1 | 4.6e-109 | 52.21 | hypothetical protein CK203_068088 [Vitis vinifera] | [more] |
RVX19406.1 | 1.3e-108 | 54.28 | hypothetical protein CK203_008540 [Vitis vinifera] | [more] |
RVW83159.1 | 4.8e-98 | 52.82 | hypothetical protein CK203_044939 [Vitis vinifera] | [more] |
RVW42770.1 | 4.8e-98 | 52.82 | hypothetical protein CK203_079903 [Vitis vinifera] | [more] |
RVW63588.1 | 4.8e-98 | 52.82 | hypothetical protein CK203_057381 [Vitis vinifera] | [more] |