Lcy11g008500 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g008500
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	SAP30_Sin3_bdg domain-containing protein
Location	Chr11: 9079718 .. 9083266 (-)
RNA-Seq Expression	Lcy11g008500
Synteny	Lcy11g008500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGAACCAGAGTTTTGTGCTTCTAGAATGCAGTCTCCTTTTCGTGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCGGTTTTATTGGGATTGCAAGGTGTAGTTAAGAAGGCTGTTGGACTTGGAGGCTGGCACTGGCTGGTATTCTCATTTTCATTCTATCTGTTAAGGACGAGGACACGACACAGATCTCCACAATGGTATGATATTGTCCACTTTGGGCATAAGCCCTCATGGCTTTGCTTTTGGTTCCACCCAAAAGGCCTCATACCAATGGAGATACTTGTCCTCCCTTATAAACCCATGATCATCCCCTTATCTAGCCAATGTGGGACTTTGGTTGCACTCCCAATTCCCAACAATCCTCCCCTCGAACAAAGTACCACAGACGAGCCTCCCTTCAAATAGTCATCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTTGCTCTTAGAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCTATCAGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGCCAGATTACGGATTCTACATATGAATATTTCTTCAAGGCTAACAAATTCTTTGTTCAACACTCGGGGATTCTACCGACATGGCTAAGTCAGGGTCTAGCTCTGATACCACTTGTTAAGGGACGAGGACACGACACAGATCTCCACAATGGTATGATATTGTCCACTTTGGGCATGAGCCCTCATGGCTTTGCTTTTGGTTCCACCCAAAAGGCCTCATACCAATGGAGATACTTGTCCTCCCTTATAAACCCATGATCATCCCCTTATCTAGCCAATGTGGGACTTTGGTTGCACTCCCAATTCCCAACACTATCTTTTTCCCTTTGTCTGTTATTTACGCTGTGTACTATGCATTTTTCTGTCTGGGTGTTTGCTTGTCGTGAAAGTTTACCAAAAGTCAATAACAATGAATCAACTATGATTGTAGAAATGCTATTATTTTGTTTTAGCTTAAAGGTTTTTAAGCTAGAAGTCTTTAACCGGAAGGAATTTATGGTTAATGTAGGCTCCATCTGATAATAATTACGTTCTAAGTTTTCTGTTTGAGAAAATTATGCTTATGCTTGCTTCCCACCTTTCTTAGAAACACAATTGAATTATTGGCAAAATTTAAAAAATAACTTCTTTTCATCTTCAAAATTTGGCTTAGATTTTAGAAACGTTTTTAAGAAATAGATGAGAAAACAAAAAAAAACATACAAACGGAAGTAATGTTTGTAAGCTTAACTTCCAAACAAAATGGTTATCAAACGGGTTATAGTTTGTCAGATATATTGGAAAAGGCTGCTACCTTTTCTTGCAGTGGCATCGATGACTATCTGCAATTGTTTCATTTTATCTGTGTGAATTTGATTAAAGGCTTTGGAGATGGTTAGCTGTTTGGTTGGAATAGTTCATAGTACTATGCTAAAATTAGATTTTGACTATAAAGGAGTTTTGTTTTGCTGTGCTGGAAATTCCATGCAAGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGAAATGCACTGAGTGTGCTGGAACATCCCACGGGAAACGAAAATGATGATCATGATCTGGACAACTCAAGTTGTAGCTCCGACATTGGTGAGAAGGACAATGATTTCTGTAAGTCACATCTCTCTTGAAAATTATGGACATGGGCCTTCATGTTCCAAAATCGTTCCTATTCCTTTCTAAAGTGGATTTTAATTTTCATTTTGTCGGAGACTTAAAGTGTCACCGTTCATGGGCAGCTAGCAGCATTGTATTCCACAAAGTTAGCAAACCAAAAGTGAGGCAGATTAGGCCATGGGCTCCATCTTCATCGGCTAAGTCAACAGGTCGGGGCAACTATGGAGAAATTCAGTCTATTCACATGCCAAAGCTGGTGACGGTGAGAAATTTGGAAACCATTGATTTTTTATTTTTCTTTTTGATATCGATGAGTGTCTAGATCAATCTTTAGTTGTCGAGCAACAGTAGGATTTTAATATCTTGGGAAGGTATTCCCATCCATTGTTTCCAACTTGTAGTGCCAGAAATTTTCATAGGAGGGGACAAAACTTTACCTTTTAACTTTTCGTGCCTGTAATCCTTCAATTCTGAACATTAGAGCAAATTAGATAGAAAATCTTAAAATCTAAATATTTTTTTAGCGTAAAATACACTTTTGATCCTTGGGTTTTGAACTTAGTCTTTATTTAACAAAACACTTTTAGTCCTTGAGATTCGAGTTTGATTTTTATTTGGTCTCTAAAATTTTCATTTGATTATAAATTGGTTCATAAAGTTTTTTTTTTTAATCTCACGGGACAACTACCTGACCCTACCACATTTGGTTGCAAAGAAAACTCGTAGGATATTAAATCCTAGGTAAGTGGCCATCATGGATTGAACCTATTCCATCTAAGTCCTTTATTTTTTCTATGGCCCTTATTGACCACTAGGACCAACCCATGATGGTTAAATTTAGTCCATGAAGTTTGAAATCAATTTCTAAATAGTCCCTTAGTAGAGTTAATTGTTAGTTCCCTTTAAAAAAAAGAGTTAATTGTTAGTTGACCTAATAGAATGTTGATGAAGTAGTTAAACTATGCTAACTAGAGTTTGTTGATATGCATTTTTTAAATGAGTTAAATTTTATTTTTTATACTTGTAAACCAATTAGAAATCAAATTCAAACTTTAGGACAAGACATGTCACTTTTGAAACTTCAAGGACCAAATAGAAACTAAATTGAAATCTCAGGGACTAAAAGTGCTAGTTTTGAAAATCTAAGGACTAAATAGAAACTAAAGTTCAAATCTCAGGGACCAAAAGTGTAATTTATCCTATTGTTTATACAGTTTTTATAATCCAAGACAAATTAAGATGGACGCCAACCAACTTTTTATCTTCCTTGGAATGTAACATCTGTGGTTTTGGGCTCATGACATAGTTTTTCTCGAATGTTGGGTAACTAACCAGTGACAAAATTGTTTGTCTTGGAGCATACAGCGGGTCAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATATATCAAGCACTTCAATCTAGTGGGTCTCACTGCAACACTTTCCACTTTTATGCTTCTTTTTTCTGTGTACTTAGCCAAAACAACTCGATTCAATGGTTTCATAATTTTAAATTCCAGGTGAACAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAACGACATTTTGCATTACAGGTTCTTTCTCTTTCTCTTTGCTGTCTGCATTTGAAATTGTGAACTGCTTCTTTTGAGAAATATATTTGTTTGTACGATGCAGACAAGTTTGAACGAGGCATCGGTGATGACTGAATTCATTCGCGCTGTTAAGAGACGAAGGGAGTGA

mRNA sequence

ATGCTGGAACCAGAGTTTTGTGCTTCTAGAATGCAGTCTCCTTTTCGTGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCGGTTTTATTGGGATTGCAAGGTGTAGTTAAGAAGGCTGTTGGACTTGGAGGCTGGCACTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGAAATGCACTGAGTGTGCTGGAACATCCCACGGGAAACGAAAATGATGATCATGATCTGGACAACTCAAGTTGTAGCTCCGACATTGGTGAGAAGGACAATGATTTCTCTAGCAGCATTGTATTCCACAAAGTTAGCAAACCAAAAGTGAGGCAGATTAGGCCATGGGCTCCATCTTCATCGGCTAAGTCAACAGGTCGGGGCAACTATGGAGAAATTCAGTCTATTCACATGCCAAAGCTGGTGACGCGGGTCAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATATATCAAGCACTTCAATCTAGTGAACAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAACGACATTTTGCATTACAGACAAGTTTGAACGAGGCATCGGTGATGACTGAATTCATTCGCGCTGTTAAGAGACGAAGGGAGTGA

Coding sequence (CDS)

ATGCTGGAACCAGAGTTTTGTGCTTCTAGAATGCAGTCTCCTTTTCGTGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCGGTTTTATTGGGATTGCAAGGTGTAGTTAAGAAGGCTGTTGGACTTGGAGGCTGGCACTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGAAATGCACTGAGTGTGCTGGAACATCCCACGGGAAACGAAAATGATGATCATGATCTGGACAACTCAAGTTGTAGCTCCGACATTGGTGAGAAGGACAATGATTTCTCTAGCAGCATTGTATTCCACAAAGTTAGCAAACCAAAAGTGAGGCAGATTAGGCCATGGGCTCCATCTTCATCGGCTAAGTCAACAGGTCGGGGCAACTATGGAGAAATTCAGTCTATTCACATGCCAAAGCTGGTGACGCGGGTCAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATATATCAAGCACTTCAATCTAGTGAACAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAACGACATTTTGCATTACAGACAAGTTTGAACGAGGCATCGGTGATGACTGAATTCATTCGCGCTGTTAAGAGACGAAGGGAGTGA

Protein sequence

MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKVSKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLVNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE

Homology

[Close]

BLAST of Lcy11g008500 vs. ExPASy TrEMBL
Match: A0A6J1FR82 (uncharacterized protein LOC111448038 OS=Cucurbita moschata OX=3662 GN=LOC111448038 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.6e-113
Identity = 210/223 (94.17%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPEFCASR+QSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+NDDHDLDNSSCSSD+GEKDND SSSIVFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKI 120

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SK +VRQIRPWAPSSSAK TGRG+ GEIQSIHMPKLVTRVKLGKLGTESLWRYI+HFNLV
Sbjct: 121 SKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIR VKRRRE
Sbjct: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 223

[Close]

BLAST of Lcy11g008500 vs. ExPASy TrEMBL
Match: A0A0A0KUM7 (SAP30_Sin3_bdg domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G047910 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.4e-113
Identity = 208/223 (93.27%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS +QSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNEND+HDLDNSSCSSDIGEKDNDFSSS+VFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SKPKVRQI+PWAPSSSAKST RG+YGEIQSIHMPK  TRV+LGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISN SRDQIL VVQRHFALQTSLNEASVMTEFIRAVK+RRE
Sbjct: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]

BLAST of Lcy11g008500 vs. ExPASy TrEMBL
Match: A0A6J1IZT1 (uncharacterized protein LOC111481424 OS=Cucurbita maxima OX=3661 GN=LOC111481424 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.8e-113
Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPEFCASR+QSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+NDDHDLDNSSCSSD+GEKDND SSSIVFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKL 120

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SK KVRQIRPWAPSSSAK TGRG+ GEIQS HMPKLVTRVKLGKLGTESLWRYI+HFNLV
Sbjct: 121 SKQKVRQIRPWAPSSSAKPTGRGSCGEIQSFHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIR VKRRRE
Sbjct: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 223

[Close]

BLAST of Lcy11g008500 vs. ExPASy TrEMBL
Match: A0A1S3BU28 (uncharacterized protein LOC103493170 OS=Cucumis melo OX=3656 GN=LOC103493170 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.8e-113
Identity = 209/223 (93.72%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS +QSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 12  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 71

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNEND+ DLDNSSCSSDIGEKDNDFSSS+VFHK+
Sbjct: 72  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 131

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SKPKVRQI+ WAPSSSAKSTGRG+YGEIQSIHMPK  TRVKLGKLGTESLWRYIKHFNLV
Sbjct: 132 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 191

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISN SRDQILHVVQRHFALQTSLNEASVMTEFIRAVK+RRE
Sbjct: 192 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 234

[Close]

BLAST of Lcy11g008500 vs. ExPASy TrEMBL
Match: A0A5D3D093 (SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004740 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.8e-113
Identity = 209/223 (93.72%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS +QSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNEND+ DLDNSSCSSDIGEKDNDFSSS+VFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SKPKVRQI+ WAPSSSAKSTGRG+YGEIQSIHMPK  TRVKLGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISN SRDQILHVVQRHFALQTSLNEASVMTEFIRAVK+RRE
Sbjct: 181 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]

BLAST of Lcy11g008500 vs. NCBI nr
Match: XP_023534417.1 (uncharacterized protein LOC111795704 [Cucurbita pepo subsp. pepo] >KAG6600567.1 hypothetical protein SDJN03_05800, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031207.1 hypothetical protein SDJN02_05247 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418.3 bits (1074), Expect = 4.1e-113
Identity = 211/223 (94.62%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPEFCASR+QSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+NDDHDLDNSSCSSD+GEKDND SSSIVFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKL 120

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SK KVRQIRPWAPSSSAK TGRG+ GEIQSIHMPKLVTRVKLGKLGTESLWRYI+HFNLV
Sbjct: 121 SKQKVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIR VKRRRE
Sbjct: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 223

[Close]

BLAST of Lcy11g008500 vs. NCBI nr
Match: XP_022943250.1 (uncharacterized protein LOC111448038 [Cucurbita moschata] >XP_022943251.1 uncharacterized protein LOC111448038 [Cucurbita moschata])

HSP 1 Score: 417.9 bits (1073), Expect = 5.4e-113
Identity = 210/223 (94.17%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPEFCASR+QSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+NDDHDLDNSSCSSD+GEKDND SSSIVFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKI 120

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SK +VRQIRPWAPSSSAK TGRG+ GEIQSIHMPKLVTRVKLGKLGTESLWRYI+HFNLV
Sbjct: 121 SKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIR VKRRRE
Sbjct: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 223

[Close]

BLAST of Lcy11g008500 vs. NCBI nr
Match: XP_004146519.1 (uncharacterized protein LOC101209634 [Cucumis sativus] >XP_011653177.1 uncharacterized protein LOC101209634 [Cucumis sativus] >KGN53330.1 hypothetical protein Csa_015002 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 9.2e-113
Identity = 208/223 (93.27%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS +QSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNEND+HDLDNSSCSSDIGEKDNDFSSS+VFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SKPKVRQI+PWAPSSSAKST RG+YGEIQSIHMPK  TRV+LGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISN SRDQIL VVQRHFALQTSLNEASVMTEFIRAVK+RRE
Sbjct: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]

BLAST of Lcy11g008500 vs. NCBI nr
Match: XP_008452044.1 (PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo] >XP_008452045.1 PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 209/223 (93.72%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS +QSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 12  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 71

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNEND+ DLDNSSCSSDIGEKDNDFSSS+VFHK+
Sbjct: 72  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 131

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SKPKVRQI+ WAPSSSAKSTGRG+YGEIQSIHMPK  TRVKLGKLGTESLWRYIKHFNLV
Sbjct: 132 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 191

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISN SRDQILHVVQRHFALQTSLNEASVMTEFIRAVK+RRE
Sbjct: 192 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 234

[Close]

BLAST of Lcy11g008500 vs. NCBI nr
Match: TYK16644.1 (uncharacterized protein E5676_scaffold21G004740 [Cucumis melo var. makuwa])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 209/223 (93.72%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEPEFCASRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS +QSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKV 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNEND+ DLDNSSCSSDIGEKDNDFSSS+VFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIRPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLV 180
           SKPKVRQI+ WAPSSSAKSTGRG+YGEIQSIHMPK  TRVKLGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           NSISN SRDQILHVVQRHFALQTSLNEASVMTEFIRAVK+RRE
Sbjct: 181 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]

BLAST of Lcy11g008500 vs. TAIR 10
Match: AT1G75060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 186.0 bits (471), Expect = 3.2e-47
Identity = 106/209 (50.72%), Postives = 144/209 (68.90%), Query Frame = 0


Query: 9   SRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKN 68
           S++QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL N
Sbjct: 20  SQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTN 79

Query: 69  GVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKVSKPKVRQI 128
           G+EVKLQRNALSVLEHPTGNE +D+DL+    +      D     ++  HK  K   R  
Sbjct: 80  GIEVKLQRNALSVLEHPTGNE-EDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSS 139

Query: 129 RPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLVNSISNASR 188
           R  +  +  +     ++ +I SI  P+L  +V L KL   +L RY +HFNLV+++ N ++
Sbjct: 140 R-LSQKALYREVSCDSHSKISSI-TPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTK 199

Query: 189 DQILHVVQRHFALQTSLNEASVMTEFIRA 218
           +Q++ ++QRHF  Q  ++E  V+  F++A
Sbjct: 200 EQLIDIIQRHFMSQ-QMDELQVIVGFVQA 224

[Close]

BLAST of Lcy11g008500 vs. TAIR 10
Match: AT1G19330.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). )

HSP 1 Score: 186.0 bits (471), Expect = 3.2e-47
Identity = 112/218 (51.38%), Postives = 147/218 (67.43%), Query Frame = 0


Query: 10  RMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNG 69
           ++QS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG
Sbjct: 17  QIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNG 76

Query: 70  VEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKVSKPKVRQIR 129
           +EVKLQRNALSVLE PTGNE DD DLD  +   +  +    F +S    K  K K+R  R
Sbjct: 77  IEVKLQRNALSVLEPPTGNEEDD-DLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQR 136

Query: 130 PWAPSSSAKSTGRGNYGEIQS----IHMPKLVTRVKLGKLGTESLWRYIKHFNLVNSISN 189
             +  SS K+  R    + QS       P+ + +V L KL   +L  Y +HFNLV++I N
Sbjct: 137 --SSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLNYWRHFNLVDAIPN 196

Query: 190 ASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
            S++Q++ +VQRHF  Q  ++E  V+  F++A KR ++
Sbjct: 197 PSKEQLIDIVQRHFMSQ-QMDELQVIVGFVQAAKRMKK 230

[Close]

BLAST of Lcy11g008500 vs. TAIR 10
Match: AT1G19330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46
Identity = 112/217 (51.61%), Postives = 145/217 (66.82%), Query Frame = 0


Query: 10  RMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNG 69
           ++QS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG
Sbjct: 17  QIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNG 76

Query: 70  VEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKVSKPKVRQIR 129
           +EVKLQRNALSVLE PTGNE DD DLD  +   +  +    F +S    K  K K+R  R
Sbjct: 77  IEVKLQRNALSVLEPPTGNEEDD-DLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQR 136

Query: 130 PWAPSSSAKSTGRGNYGEIQSI---HMPKLVTRVKLGKLGTESLWRYIKHFNLVNSISNA 189
             +  SS K+  R    + QS      P    +V L KL   +L  Y +HFNLV++I N 
Sbjct: 137 --SSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFNLVDAIPNP 196

Query: 190 SRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           S++Q++ +VQRHF  Q  ++E  V+  F++A KR ++
Sbjct: 197 SKEQLIDIVQRHFMSQ-QMDELQVIVGFVQAAKRMKK 229

[Close]

BLAST of Lcy11g008500 vs. TAIR 10
Match: AT1G75060.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.4 bits (459), Expect = 7.9e-46
Identity = 106/209 (50.72%), Postives = 143/209 (68.42%), Query Frame = 0


Query: 9   SRMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKN 68
           S++QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL N
Sbjct: 20  SQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTN 79

Query: 69  GVEVKLQRNALSVLEHPTGNENDDHDLDNSSCSSDIGEKDNDFSSSIVFHKVSKPKVRQI 128
           G+EVKLQRNALSVLEHPTGNE +D+DL+    +      D     ++  HK  K   R  
Sbjct: 80  GIEVKLQRNALSVLEHPTGNE-EDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSS 139

Query: 129 RPWAPSSSAKSTGRGNYGEIQSIHMPKLVTRVKLGKLGTESLWRYIKHFNLVNSISNASR 188
           R  +  +  +     ++ +I SI  P+L   V L KL   +L RY +HFNLV+++ N ++
Sbjct: 140 R-LSQKALYREVSCDSHSKISSI-TPRL-NMVDLTKLDMAALLRYWRHFNLVDALPNPTK 199

Query: 189 DQILHVVQRHFALQTSLNEASVMTEFIRA 218
           +Q++ ++QRHF  Q  ++E  V+  F++A
Sbjct: 200 EQLIDIIQRHFMSQ-QMDELQVIVGFVQA 223

[Close]

BLAST of Lcy11g008500 vs. TAIR 10
Match: AT1G19330.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45
Identity = 112/219 (51.14%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 10  RMQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNG 69
           ++QS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG
Sbjct: 17  QIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNG 76

Query: 70  VEVKLQRNALSVLEHPTGNENDDH-DLDNSSCS-SDIGEKDNDFSSSIVFHKVSKPKVRQ 129
           +EVKLQRNALSVLE PTGNE DD  D +N+  + SD+  +D          K  K K+R 
Sbjct: 77  IEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMTSEDT--------LKPHKSKLRG 136

Query: 130 IRPWAPSSSAKSTGRGNYGEIQSI---HMPKLVTRVKLGKLGTESLWRYIKHFNLVNSIS 189
            R  +  SS K+  R    + QS      P    +V L KL   +L  Y +HFNLV++I 
Sbjct: 137 QR--SSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFNLVDAIP 196

Query: 190 NASRDQILHVVQRHFALQTSLNEASVMTEFIRAVKRRRE 224
           N S++Q++ +VQRHF  Q  ++E  V+  F++A KR ++
Sbjct: 197 NPSKEQLIDIVQRHFMSQ-QMDELQVIVGFVQAAKRMKK 224

The following BLAST results are available for this feature:

BLAST of Lcy11g008500 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g008500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FR82	2.6e-113	94.17	uncharacterized protein LOC111448038 OS=Cucurbita moschata OX=3662 GN=LOC1114480...	[more]
A0A0A0KUM7	4.4e-113	93.27	SAP30_Sin3_bdg domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G047...	[more]
A0A6J1IZT1	5.8e-113	94.17	uncharacterized protein LOC111481424 OS=Cucurbita maxima OX=3661 GN=LOC111481424...	[more]
A0A1S3BU28	5.8e-113	93.72	uncharacterized protein LOC103493170 OS=Cucumis melo OX=3656 GN=LOC103493170 PE=...	[more]
A0A5D3D093	5.8e-113	93.72	SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Lcy11g008500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534417.1	4.1e-113	94.62	uncharacterized protein LOC111795704 [Cucurbita pepo subsp. pepo] >KAG6600567.1 ...	[more]
XP_022943250.1	5.4e-113	94.17	uncharacterized protein LOC111448038 [Cucurbita moschata] >XP_022943251.1 unchar...	[more]
XP_004146519.1	9.2e-113	93.27	uncharacterized protein LOC101209634 [Cucumis sativus] >XP_011653177.1 uncharact...	[more]
XP_008452044.1	1.2e-112	93.72	PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo] >XP_008452045.1 P...	[more]
TYK16644.1	1.2e-112	93.72	uncharacterized protein E5676_scaffold21G004740 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy11g008500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75060.1	3.2e-47	50.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19330.3	3.2e-47	51.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19330.1	1.6e-46	51.61	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75060.2	7.9e-46	50.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19330.2	1.8e-45	51.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038291	SAP30, C-terminal domain superfamily	GENE3D	6.10.160.20		coord: 146..223 e-value: 6.0E-17 score: 63.3
IPR025718	Histone deacetylase complex subunit SAP30, Sin3 binding domain	PFAM	PF13867	SAP30_Sin3_bdg	coord: 165..219 e-value: 1.5E-16 score: 60.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	PANTHER	PTHR13286:SF8	OS04G0166600 PROTEIN	coord: 1..222
IPR024145	Histone deacetylase complex subunit SAP30/SAP30-like	PANTHER	PTHR13286	SAP30	coord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g008500.1	Lcy11g008500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0000118	histone deacetylase complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003712	transcription coregulator activity