Lcy11g007560 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCATTTCCGTTCCAATTTCAGCAGAGAGATTCAGAGGAAGAAGTCGAAGGAGACGAACATCGCCATGGATCCGAAGCTAACTGAGGTCTCGCAGCACTTCGAGCGCTTCAAAGCTGCTCTTGTCAGGCACGATTCTGATTCTTGTAACAATCTCCTCTCTCAGCTGAAGGTATAGATTTGATTCCAGAACCCTAATGTTTCTCCCAATTACTCATCCGTTCACTCCTCACTGGATTTTCAGCGTGTTTTCTTCTCTTCTCGAGTAGTTTGGTTTTTGATAATGTTGTTCTAATTTTCCGAAAGCTTTTTTCGTTTTCTTTTTGCAGGTTCTTCTGACTGGATTCAGAAGTCTTCCGCCATTGTTTGAAGATACGCCCAATGCTGTCCATGAATTGACGGTAGCTAGTAAGAATGCCATGCCATAATCTCTGACATAGTTTTGTAGTTCTTATTTGCTGTGGCTTGGATCTTGAAATACTCTGCTGTAGACGATTCATGTACCTTCGTAGTAACAAATAGAGACTGATATTTGTGTGGAACTTGGTAATTATTATTAACTATCATGATTAGTGATTTCTAAGCTACCACCCGAACTAAAAGCTTATGCTATTACATCAAATTAAATTTAACTTATTTTTTTCTTTTTTCCTTTTTATCTATTATCTACAATGATAAGATTATGATGGGGGTCTTTGAAACCATTTTCCCACCTTAAGAGTTACATGACAGATGCCATAGTTGATGCAAATTTCGATAACATTTTAATGAGCTATTTGAGTAATTTTACTGGAATTTCATAAATTGATTAATTGAAGTTGGCTAAATACAGAAACTACATCACTCGAACATGAATAAGTAATTTACTTATGGATCATTGAACATTCTGATGCAGAGTTTTCTGTATGAAAGAATTGTTATCTTTTGTGACTTTGGTTTTTTTGTCCCCTTACTGTATAATCATTTTCTTAATTTGACTCTTATACAATTTTTGTGTACTTGGGATCTTCAGGGGACATATATGAGCATGCTGTGTTGCTTAGTGTGAAGGTTGAGGATCAAGATGCATTTGAAAGAGATTTCTTCCAATTGAAGCCTTACTATACTGATGCTCGGTATGCTGCTCTTTCTTTGTGGAAGCGAAATTTGAATTCCTAAATCCTATCTAAAATGATTAAGCTGCTGTATTATTATGATATATTGCTTGTTTATTTCAGATGAGGAGGAAAATATAAAAATGCATAGTTTTTTTCTTTTTTTAGTTAGTTTCTTTGATTATTTTTTCTTCATGAGATTCTTGGAAAAGTTATGTCAAATGCCATGAGTTAAATGATTTATGCTCCTTTGTGAAAGAGAAGAGCCTATGGAATGGTGTAGTAAAATAAAGAGGACAAGAGTATAGATTTAACTGGAGTTCTATTGAACAGTTTGATTCTTTGTTCATTTGAAGTGAAATTTCATCAAAGACAAAAGTTACATATTGATATTATTTGTAATTACAATTCTTTTAGTTGGTCACTATTCGGTTGTTTACTTTAATGTATTATCTTCCTTCTTTCATGTAAATGAGTTAATTTAGATAAAATGAACTGCTTTGTTTAGATGATCGAATGACAATGAACTGCTAGAGTAACAAATGGATCCTAACTTATCAGAAAAAACATCTTCCTTTGGCATGCTGGCACTTGTGCTATTTTGTGGGGTTTATGGGGGAAAGAAACCATTGAATTTTTAGATGGACCTAGAGACATTCTTGTGAGGTTTGGGCTAATATTAGGTTTCATGTTTATTTATGGGCCTCGGTTGCCAAGGCTTTTTTGTAAACCCGCTAGGTCTTATTTTGATTGATTGGAAATCCTTCCTTTAGTTGGGTTCCTTTTTGGGGGCTTGATTTTTTTGGATGCCCTTGTATTCTTTCATTTTTTTTTTTCCTCAATGAAAGCTTGGTTTATTAAAAAAAGAAAAAAATCAGAAAAACATCTTTTATGATCTTGAGGTTTAAAACTGATGTATATGATTTTAGCTTAAGCATCGTGTGGTTTTTATCTTGTATTTTACCAGAATTGCCACATTGAGTTTATTTGACGATAGCTTTGAGTTTGAACTTTCGGATACAATTTTGTCTCATAAAAGTTTGGTTCTTTTGGAGCAGTAACCGCCTTCCCCCATCCCCTCAGGAGTATCCAATCTTGGGTCTCAACCTTCTGAGGCTTCTTGTGCAAAATAGAATTGCTGAATTCCATACTGAACTTGAACTTCTTTCCTCCACTGCCTTGGAGAACCCATGCATTAAACATGCAGTGGAGCTGGAGCAATCTTTCATGGAAGGGGCTTACAACCGTGTGTTGAGTGCTCGACAGACTGTGCCACATGAAACTTTTGCTTATTTCATGGACCTCCTTGCAAAGACTGTAAGGTAACTCATCTAAATAACGTCTCTTACTAATATAATAATAGATGAGAAATCCCATCTCCTTTTTTAAGTGTTTGGCAAACTCTCCCTCTCTTCCTTGGGGGTTACTGACAAGTAGCAGTTACATTTCATTCTTTATTTCATCCATAGTTTACGTCTTTTCTGCCATTTTCAGAGATGAAATAGCCGGTTGCAGCGAGAAGGCATATGATTATCTTTCTATAAGTGATGCACGTCAAATGCTGTTGTTTTCCTCTGACCAAGAACTTCTGGAATATGTCAAGGAGGTAAGCTCTGTTGGATGCATTTAATCCTCGATAATCTGCATAATCACTAAGACATAGGATAGATGCAAGTTTTCTTTTTAATGAATTGTGAAACACTTCCACCTCAATGTGGGGTTCTTTACTTTATACTCCCCTGGACTAACCTGCACAATGTGAAGCTTTGGAATACCTGCTAAAAGAGAGAGTTTGCACCGATTATTCCATGTCTCATTCTTACCATGTTTACATGATGCACCTGTTGTTTCAATTCAGGAGCACCCCGAGTGGGAGATTACGAACGGCGTTGTATATTTCCAGAAGGCGAAAGATTCCGCACCTTGCAAGGAAATACCTTCTCTTCAACTCATCAACCAGACGCTCAGTTATGCAAGGGAGTTGGAGCGGATTGTATGAACCAAGCTAGCAGCTTCTCATGATTGCTATCTACTGAGTTTCAACATGCCAAGGTTGATGGTTATCCCTCCCCCCTCTTATGATCTTTATGGGATTTTTCCATACAAAATTATTATTTTTGGTGACATTTAGTCAGATTTTCGTCAATTCATCTTGGTATTTTCACTATCATGAGATGATTGTTGTTGCATTTGTCATCTAAGTGTTTGTTTACGATTAAATATCCTCGCCGTATAGTAAGATTGAAATGACAAGGAAATCGTTCTTGTTTGATTACTACTATGGGGTCGGATCTAGATTAAAAAATGTTTCGAAAAATACTTGTTATAATTCAAAACTGGGTTTAGTGATAGGTTTGTTAATCTCATCGACTATATAAATTCGC TTCATTTCCGTTCCAATTTCAGCAGAGAGATTCAGAGGAAGAAGTCGAAGGAGACGAACATCGCCATGGATCCGAAGCTAACTGAGGTCTCGCAGCACTTCGAGCGCTTCAAAGCTGCTCTTGTCAGGCACGATTCTGATTCTTGTAACAATCTCCTCTCTCAGCTGAAGGTTCTTCTGACTGGATTCAGAAGTCTTCCGCCATTGTTTGAAGATACGCCCAATGCTGTCCATGAATTGACGGTAGCTAGGGACATATATGAGCATGCTGTGTTGCTTAGTGTGAAGGTTGAGGATCAAGATGCATTTGAAAGAGATTTCTTCCAATTGAAGCCTTACTATACTGATGCTCGTAACCGCCTTCCCCCATCCCCTCAGGAGTATCCAATCTTGGGTCTCAACCTTCTGAGGCTTCTTGTGCAAAATAGAATTGCTGAATTCCATACTGAACTTGAACTTCTTTCCTCCACTGCCTTGGAGAACCCATGCATTAAACATGCAGTGGAGCTGGAGCAATCTTTCATGGAAGGGGCTTACAACCGTGTGTTGAGTGCTCGACAGACTGTGCCACATGAAACTTTTGCTTATTTCATGGACCTCCTTGCAAAGACTGTAAGAGATGAAATAGCCGGTTGCAGCGAGAAGGCATATGATTATCTTTCTATAAGTGATGCACGTCAAATGCTGTTGTTTTCCTCTGACCAAGAACTTCTGGAATATGTCAAGGAGGAGCACCCCGAGTGGGAGATTACGAACGGCGTTGTATATTTCCAGAAGGCGAAAGATTCCGCACCTTGCAAGGAAATACCTTCTCTTCAACTCATCAACCAGACGCTCAGTTATGCAAGGGAGTTGGAGCGGATTGTATGAACCAAGCTAGCAGCTTCTCATGATTGCTATCTACTGAGTTTCAACATGCCAAGGTTGATGGTTATCCCTCCCCCCTCTTATGATCTTTATGGGATTTTTCCATACAAAATTATTATTTTTGGTGACATTTAGTCAGATTTTCGTCAATTCATCTTGGTATTTTCACTATCATGAGATGATTGTTGTTGCATTTGTCATCTAAGTGTTTGTTTACGATTAAATATCCTCGCCGTATAGTAAGATTGAAATGACAAGGAAATCGTTCTTGTTTGATTACTACTATGGGGTCGGATCTAGATTAAAAAATGTTTCGAAAAATACTTGTTATAATTCAAAACTGGGTTTAGTGATAGGTTTGTTAATCTCATCGACTATATAAATTCGC ATGGATCCGAAGCTAACTGAGGTCTCGCAGCACTTCGAGCGCTTCAAAGCTGCTCTTGTCAGGCACGATTCTGATTCTTGTAACAATCTCCTCTCTCAGCTGAAGGTTCTTCTGACTGGATTCAGAAGTCTTCCGCCATTGTTTGAAGATACGCCCAATGCTGTCCATGAATTGACGGTAGCTAGGGACATATATGAGCATGCTGTGTTGCTTAGTGTGAAGGTTGAGGATCAAGATGCATTTGAAAGAGATTTCTTCCAATTGAAGCCTTACTATACTGATGCTCGTAACCGCCTTCCCCCATCCCCTCAGGAGTATCCAATCTTGGGTCTCAACCTTCTGAGGCTTCTTGTGCAAAATAGAATTGCTGAATTCCATACTGAACTTGAACTTCTTTCCTCCACTGCCTTGGAGAACCCATGCATTAAACATGCAGTGGAGCTGGAGCAATCTTTCATGGAAGGGGCTTACAACCGTGTGTTGAGTGCTCGACAGACTGTGCCACATGAAACTTTTGCTTATTTCATGGACCTCCTTGCAAAGACTGTAAGAGATGAAATAGCCGGTTGCAGCGAGAAGGCATATGATTATCTTTCTATAAGTGATGCACGTCAAATGCTGTTGTTTTCCTCTGACCAAGAACTTCTGGAATATGTCAAGGAGGAGCACCCCGAGTGGGAGATTACGAACGGCGTTGTATATTTCCAGAAGGCGAAAGATTCCGCACCTTGCAAGGAAATACCTTCTCTTCAACTCATCAACCAGACGCTCAGTTATGCAAGGGAGTTGGAGCGGATTGTATGA MDPKLTEVSQHFERFKAALVRHDSDSCNNLLSQLKVLLTGFRSLPPLFEDTPNAVHELTVARDIYEHAVLLSVKVEDQDAFERDFFQLKPYYTDARNRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETFAYFMDLLAKTVRDEIAGCSEKAYDYLSISDARQMLLFSSDQELLEYVKEEHPEWEITNGVVYFQKAKDSAPCKEIPSLQLINQTLSYARELERIV Homology
BLAST of Lcy11g007560 vs. ExPASy Swiss-Prot
Match: Q9SGW3 (26S proteasome non-ATPase regulatory subunit 8 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPN12A PE=1 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 7.6e-125 Identity = 223/267 (83.52%), Postives = 241/267 (90.26%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy Swiss-Prot
Match: Q9FHY0 (Putative 26S proteasome non-ATPase regulatory subunit 8 homolog B OS=Arabidopsis thaliana OX=3702 GN=RPN12B PE=5 SV=2) HSP 1 Score: 319.3 bits (817), Expect = 4.1e-86 Identity = 172/267 (64.42%), Postives = 197/267 (73.78%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy Swiss-Prot
Match: P02889 (Probable 26S proteasome non-ATPase regulatory subunit 8 OS=Dictyostelium discoideum OX=44689 GN=psmD8-1 PE=2 SV=2) HSP 1 Score: 196.4 bits (498), Expect = 4.0e-49 Identity = 108/265 (40.75%), Postives = 169/265 (63.77%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy Swiss-Prot
Match: Q9CX56 (26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-42 Identity = 101/243 (41.56%), Postives = 144/243 (59.26%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy Swiss-Prot
Match: Q5RE15 (26S proteasome non-ATPase regulatory subunit 8 (Fragment) OS=Pongo abelii OX=9601 GN=PSMD8 PE=2 SV=2) HSP 1 Score: 174.1 bits (440), Expect = 2.1e-42 Identity = 101/243 (41.56%), Postives = 145/243 (59.67%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy TrEMBL
Match: A0A5D3D1F4 (26S proteasome non-ATPase regulatory subunit 8-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003260 PE=3 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 4.5e-144 Identity = 257/267 (96.25%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy TrEMBL
Match: A0A1S3BSK8 (26S proteasome non-ATPase regulatory subunit 8 homolog A OS=Cucumis melo OX=3656 GN=LOC103493070 PE=3 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 4.5e-144 Identity = 257/267 (96.25%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy TrEMBL
Match: A0A5A7TS32 (26S proteasome non-ATPase regulatory subunit 8-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002620 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 5.8e-144 Identity = 257/267 (96.25%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy TrEMBL
Match: A0A6J1J7S1 (26S proteasome non-ATPase regulatory subunit 8 homolog A-like OS=Cucurbita maxima OX=3661 GN=LOC111483349 PE=3 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 3.0e-140 Identity = 249/267 (93.26%), Postives = 261/267 (97.75%), Query Frame = 0
BLAST of Lcy11g007560 vs. ExPASy TrEMBL
Match: A0A6J1C6S0 (26S proteasome non-ATPase regulatory subunit 8 homolog A-like OS=Momordica charantia OX=3673 GN=LOC111008489 PE=3 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 3.0e-140 Identity = 255/267 (95.51%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Lcy11g007560 vs. NCBI nr
Match: XP_038876610.1 (26S proteasome non-ATPase regulatory subunit 8 homolog A [Benincasa hispida]) HSP 1 Score: 523.1 bits (1346), Expect = 1.4e-144 Identity = 260/267 (97.38%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of Lcy11g007560 vs. NCBI nr
Match: TYK16516.1 (26S proteasome non-ATPase regulatory subunit 8-like protein A [Cucumis melo var. makuwa]) HSP 1 Score: 520.4 bits (1339), Expect = 9.2e-144 Identity = 257/267 (96.25%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of Lcy11g007560 vs. NCBI nr
Match: XP_008451917.1 (PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Cucumis melo]) HSP 1 Score: 520.4 bits (1339), Expect = 9.2e-144 Identity = 257/267 (96.25%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of Lcy11g007560 vs. NCBI nr
Match: KAA0044956.1 (26S proteasome non-ATPase regulatory subunit 8-like protein A [Cucumis melo var. makuwa]) HSP 1 Score: 520.0 bits (1338), Expect = 1.2e-143 Identity = 257/267 (96.25%), Postives = 264/267 (98.88%), Query Frame = 0
BLAST of Lcy11g007560 vs. NCBI nr
Match: XP_023552682.1 (26S proteasome non-ATPase regulatory subunit 8 homolog A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 511.9 bits (1317), Expect = 3.3e-141 Identity = 252/267 (94.38%), Postives = 262/267 (98.13%), Query Frame = 0
BLAST of Lcy11g007560 vs. TAIR 10
Match: AT1G64520.1 (regulatory particle non-ATPase 12A ) HSP 1 Score: 448.0 bits (1151), Expect = 5.4e-126 Identity = 223/267 (83.52%), Postives = 241/267 (90.26%), Query Frame = 0
BLAST of Lcy11g007560 vs. TAIR 10
Match: AT5G42040.1 (regulatory particle non-ATPase 12B ) HSP 1 Score: 319.3 bits (817), Expect = 2.9e-87 Identity = 172/267 (64.42%), Postives = 197/267 (73.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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