Lcy11g006910 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g006910
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptioncold shock domain-containing protein 3-like
LocationChr11: 7021490 .. 7024300 (-)
RNA-Seq ExpressionLcy11g006910
SyntenyLcy11g006910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAACCAAAGGCGGGAAACAAAACCCTAGAAGAAAAAGACGCAAAATTCAAAACAGAGGCCGATCGGAGAGAGAGAGAGAAGAGATGAAGTTCGAAGCTAAGAGGAATTTCGATTTCGAATTCGAAGATGACAACGATGAGGATTTCCTTTCCGAGGTGGCCGCGGCTGAAGCTCGTGCCCTAGCCAGTAAGCGCAGAAAAATCCCCAATCATTCCATCGATCCGCCCAAGAACGTCATCACGGAGGTTTCGGACAAATTTTCCCTTAATTCAGATGGGGAAGGGCTCTACATCGCCGCTTTGAAAGGAAACCCTAATGTCCTCTCTCAAATTTCCGGTCGGACAGCCAATTCTGGCAACAAGGGATTCACTTCTGCGAATTCTACTGCTCAATCGGAAGGCGGTGGTTCGTGTTTCAAATGCGGGAAATTAGGGCATTGGGCCAGAGACTGCGATGCTCCGGGAGGTGGAGGGTCTTTCAATGCTTCAGGGAATACCGATACGTCTGTTGCGGAGAAGGCATGTCCCTGTGGATTGGGAGTTTGTTTTGTACTGACTGCGAATACGGAGAGGAATCGAGGTCGAAAATTTTACAAATGCCCCGTTCGACAGGTGATGATGCTGTATATGTTTTTCTCTTTAATAGTCTCCTTCGTTCCCCTTCCCGTTCGGCAGGTGATGATGCTGTATATGTTTGTCTTCCTCTGGTAGATGTTGGGTTTTGTCAGAAATATCTAAGCATTTATTAAGAAACTCGAGAAAGATAATGATCACCGATGTTACTTAAACCTCTGGGTAACATGAATTTTAGTACTTAGTGCAGTAAATTCGTCCAAGTAGCTATTTGAACTCTGAATTTTGCTGTTGCCATTTTGAGTTCATAGCTCATTGAATTATTTTTCTGCCACACAGTAACCTTTGATCCTCACATAGTTATATACCAATGTCCTACTTTCTTCTGATATACATTGAATTACTCTCAGGAAAATGGTGGCTGTGGATTCTTTGAGTGGTGTGACAATGCCTCTGCAACTAATGTAATGAGTTATGGAAGCCAAAATCGTGCATCAAGTTCATCATTTTCAGACCTTCAGTGCCCCTGTGGTGCTGGTCCTTGCATAATTCTAACAGCCAAAACAGGGGAAAATGTTGGGCAGCAATTCTATCGTTGCCCTTCATACCAGGTAATTTTTATAATAGAAATGCTTGTGCAGCAGTTCTATTGTCTTGTGATGACGTAATTAGATATAAAGTCTCAAAATTGTTTGTTCATGTTTAGATTTCTGGTTCTTGCATAATGTAATGACATATGCAGCAGTTCTATGTGCGAAAGCTTTTAGGTTTATTGCTTGGAAATATGTGTGCATTTGACGCTTCATTCAGACAGATTCAAAGAAAATAAAATTTGTTCTGATACCTTGGCTAACTTCAGTGCTTCTCATACATTTGTCGCATTTTTCCAAATTTAATTCGTGGTCCCAATTTTGTGATGTTTTCATTTTTAGATCAATTGATTACGTTGGGAGATGAAAATTATGGTTTTGAAGGTGGCCAAAATTATTGCCAGCAATTGGGCTAGTTGACAATTACTCTGCATACTTCTAGTTCTAGTTGGCTTAAATGACTTAAGTGTATATTTACATTATATGAAACGGGAAAGGAAACAATGCTGGTGAGGACAGCATATAATGCGAATATACTTAATGGAGTGGCTGAGATGACTATCATCTGGAAAACGCCATTATATTGCATCTCCGGATTCTTTTCGCCTCATCATGCCTTTATTTCATAGGCTCATATATACCAATTGAAGCACAATCAAGAGCAAGTTAATTAATTCCAACTCTCCAAACAAGTTAGTTGAAGAGAATAAGTGAATGTGTCGTTTATTAGTTGATCCTCCCTGCTTTTTAGATGGTGAGGTGAGGATGCTTCACTTGTTACTCGAAATGAGAAATTTCATCTGCATATCACTTTGTCATGCTTCATGAAACCTTCCCAAGGTTTATCTTTCTATGCTTACTTTATGTCCGTATCCAGCTCCAGTATTTCTTCAACATCATTTGTACACATTTCTCTGCAAATGTTTTGATGCTTGCAAATTGCATAAATTGTATATTGTAATTCCTCATCAGTGGAACTCAAACCTTTCCTGCAGGCAACTTGTGGGTTTTTCCAGTGGTGCAAGGAGCCTTCCATGGCAACCAAGAATCAAATGAGTGCCAATAAGGTCTATGGTAACACAAACGACACAAGCAAAAGCATTGCTGGGACTGTGCGAACGGGTTCTTCCTGTTATAAATGTGGCGGTGAAGGGCATTGGGCTAGAGATTGCTCACAGTCACACACACCATCCAATCCACCATCTGCAGAGTTTGGCAGAAGTCAATCTTCACATGGAACCTGTTTCAAATGCGGCAAGCCTGGCCATTGGGCGAGGGACTGTTCTAATTGTTAATAATAGGTACTAATCCTTTTGCTGCTTCTGCAATAGGGCTGTTTCAAGTTTATTAGTTGTTTAAGCTTGTAAATTCACAAGTCCAGGTAAGTCACCTGACATTTTGCTCATTTCCCCCACTATCCTGTTTTGAAGTTAACATTTACTCCACTTGAGTGGATGATATTGATATGGGTTAGCTAGCTTAGAATTGGGATACTTTTATCTTTGTTTTGCTCAATTCCGTAATTTAAGGCCTCATTTGATAACCATTTGGTTTTTAAAAATCATGCTTGTTTTCTCTCAATTTCCTTACAATGGTTTTCATATTTGTTAAGGAGACATTTGAGTTCTTAACCAAATTTCAAAAATAA

mRNA sequence

GAAACCAAAGGCGGGAAACAAAACCCTAGAAGAAAAAGACGCAAAATTCAAAACAGAGGCCGATCGGAGAGAGAGAGAGAAGAGATGAAGTTCGAAGCTAAGAGGAATTTCGATTTCGAATTCGAAGATGACAACGATGAGGATTTCCTTTCCGAGGTGGCCGCGGCTGAAGCTCGTGCCCTAGCCAGTAAGCGCAGAAAAATCCCCAATCATTCCATCGATCCGCCCAAGAACGTCATCACGGAGGTTTCGGACAAATTTTCCCTTAATTCAGATGGGGAAGGGCTCTACATCGCCGCTTTGAAAGGAAACCCTAATGTCCTCTCTCAAATTTCCGGTCGGACAGCCAATTCTGGCAACAAGGGATTCACTTCTGCGAATTCTACTGCTCAATCGGAAGGCGGTGGTTCGTGTTTCAAATGCGGGAAATTAGGGCATTGGGCCAGAGACTGCGATGCTCCGGGAGGTGGAGGGTCTTTCAATGCTTCAGGGAATACCGATACGTCTGTTGCGGAGAAGGCATGTCCCTGTGGATTGGGAGTTTGTTTTGTACTGACTGCGAATACGGAGAGGAATCGAGGTCGAAAATTTTACAAATGCCCCGTTCGACAGGAAAATGGTGGCTGTGGATTCTTTGAGTGGTGTGACAATGCCTCTGCAACTAATGTAATGAGTTATGGAAGCCAAAATCGTGCATCAAGTTCATCATTTTCAGACCTTCAGTGCCCCTGTGGTGCTGGTCCTTGCATAATTCTAACAGCCAAAACAGGGGAAAATGTTGGGCAGCAATTCTATCGTTGCCCTTCATACCAGGCAACTTGTGGGTTTTTCCAGTGGTGCAAGGAGCCTTCCATGGCAACCAAGAATCAAATGAGTGCCAATAAGGTCTATGGTAACACAAACGACACAAGCAAAAGCATTGCTGGGACTGTGCGAACGGGTTCTTCCTGTTATAAATGTGGCGGTGAAGGGCATTGGGCTAGAGATTGCTCACAGTCACACACACCATCCAATCCACCATCTGCAGAGTTTGGCAGAAGTCAATCTTCACATGGAACCTGTTTCAAATGCGGCAAGCCTGGCCATTGGGCGAGGGACTGTTCTAATTGTTAATAATAGGTACTAATCCTTTTGCTGCTTCTGCAATAGGGCTGTTTCAAGTTTATTAGTTGTTTAAGCTTGTAAATTCACAAGTCCAGGTAAGTCACCTGACATTTTGCTCATTTCCCCCACTATCCTGTTTTGAAGTTAACATTTACTCCACTTGAGTGGATGATATTGATATGGGTTAGCTAGCTTAGAATTGGGATACTTTTATCTTTGTTTTGCTCAATTCCGTAATTTAAGGCCTCATTTGATAACCATTTGGTTTTTAAAAATCATGCTTGTTTTCTCTCAATTTCCTTACAATGGTTTTCATATTTGTTAAGGAGACATTTGAGTTCTTAACCAAATTTCAAAAATAA

Coding sequence (CDS)

ATGAAGTTCGAAGCTAAGAGGAATTTCGATTTCGAATTCGAAGATGACAACGATGAGGATTTCCTTTCCGAGGTGGCCGCGGCTGAAGCTCGTGCCCTAGCCAGTAAGCGCAGAAAAATCCCCAATCATTCCATCGATCCGCCCAAGAACGTCATCACGGAGGTTTCGGACAAATTTTCCCTTAATTCAGATGGGGAAGGGCTCTACATCGCCGCTTTGAAAGGAAACCCTAATGTCCTCTCTCAAATTTCCGGTCGGACAGCCAATTCTGGCAACAAGGGATTCACTTCTGCGAATTCTACTGCTCAATCGGAAGGCGGTGGTTCGTGTTTCAAATGCGGGAAATTAGGGCATTGGGCCAGAGACTGCGATGCTCCGGGAGGTGGAGGGTCTTTCAATGCTTCAGGGAATACCGATACGTCTGTTGCGGAGAAGGCATGTCCCTGTGGATTGGGAGTTTGTTTTGTACTGACTGCGAATACGGAGAGGAATCGAGGTCGAAAATTTTACAAATGCCCCGTTCGACAGGAAAATGGTGGCTGTGGATTCTTTGAGTGGTGTGACAATGCCTCTGCAACTAATGTAATGAGTTATGGAAGCCAAAATCGTGCATCAAGTTCATCATTTTCAGACCTTCAGTGCCCCTGTGGTGCTGGTCCTTGCATAATTCTAACAGCCAAAACAGGGGAAAATGTTGGGCAGCAATTCTATCGTTGCCCTTCATACCAGGCAACTTGTGGGTTTTTCCAGTGGTGCAAGGAGCCTTCCATGGCAACCAAGAATCAAATGAGTGCCAATAAGGTCTATGGTAACACAAACGACACAAGCAAAAGCATTGCTGGGACTGTGCGAACGGGTTCTTCCTGTTATAAATGTGGCGGTGAAGGGCATTGGGCTAGAGATTGCTCACAGTCACACACACCATCCAATCCACCATCTGCAGAGTTTGGCAGAAGTCAATCTTCACATGGAACCTGTTTCAAATGCGGCAAGCCTGGCCATTGGGCGAGGGACTGTTCTAATTGTTAA

Protein sequence

MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC
Homology
BLAST of Lcy11g006910 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-09
Identity = 84/296 (28.38%), Postives = 107/296 (36.15%), Query Frame = 0

Query: 55  VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCG 114
           VSD F   + GE +      G+      I   TA  G       NS+  S  GG+CF CG
Sbjct: 44  VSDGFRSLTLGESVEYEIALGSDGKTKAIE-VTAPGGGSLNKKENSSRGS--GGNCFNCG 103

Query: 115 KLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTE--------RNRG 174
           ++GH A+DCD   GG SF   G   +    +   CG    F                  G
Sbjct: 104 EVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNSGGGGGGG 163

Query: 175 RKFYKCPVRQENGGCGFF-EWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILT 234
           R  Y C      G  G   + C   S  N   YG      S       C           
Sbjct: 164 RPCYSC------GEVGHLAKDCRGGSGGN--RYGGGGGRGSGGDGCYMCGGVGHFARDCR 223

Query: 235 AKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRT 294
              G NVG     C     TCG      +                    TSK  +G    
Sbjct: 224 QNGGGNVGGGGSTC----YTCGGVGHIAKVC------------------TSKIPSGGGGG 283

Query: 295 GSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN 342
           G +CY+CGG GH ARDC +  + S+      G    S+  CF CGK GH+AR+C++
Sbjct: 284 GRACYECGGTGHLARDCDRRGSGSS------GGGGGSN-KCFICGKEGHFARECTS 299

BLAST of Lcy11g006910 vs. ExPASy Swiss-Prot
Match: O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.5e-08
Identity = 82/313 (26.20%), Postives = 114/313 (36.42%), Query Frame = 0

Query: 55  VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGN--KGFTSANSTAQSEGGGS-CF 114
           VS+ +   + G+ +  A  +G+      ++      G+  K   S  + A+  GGGS C+
Sbjct: 44  VSEGYRSLTVGDAVEFAITQGSDGKTKAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCY 103

Query: 115 KCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRK-FY 174
            CG+LGH ++DC   GGGG                                R+RG +  Y
Sbjct: 104 NCGELGHISKDCGIGGGGG----------------------------GGERRSRGGEGCY 163

Query: 175 KCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGE 234
            C      G  G F   D  SA N        R ++   +D    CG             
Sbjct: 164 NC------GDTGHFA-RDCTSAGN-----GDQRGATKGGNDGCYTCG------------- 223

Query: 235 NVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTND-----TSKSIAGTVRT 294
           +VG     C       G      +   A K         G+        T K  AG VR+
Sbjct: 224 DVGHVARDCTQKSVGNG------DQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRS 283

Query: 295 G----SSCYKCGGEGHWARDCSQSHTPSN-----PPSAEFGRSQSSHGT--------CFK 342
           G     +CY CGG GH ARDC+    PS        S    R     G+        C+K
Sbjct: 284 GGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYK 297

BLAST of Lcy11g006910 vs. ExPASy Swiss-Prot
Match: Q04832 (DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-07
Identity = 61/240 (25.42%), Postives = 82/240 (34.17%), Query Frame = 0

Query: 103 QSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTE 162
           ++E   SC  CGK GH+AR+C               D+   E++  C            E
Sbjct: 11  RTESSTSCRNCGKEGHYARECP------------EADSKGDERSTTC-------FRCGEE 70

Query: 163 RNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQC-PCGAGPC 222
            +  R   +CP    +G  G    C        MS    N A   +    +C  CG    
Sbjct: 71  GHMSR---ECPNEARSGAAGAMT-CFRCGEAGHMSRDCPNSAKPGAAKGFECYKCG---- 130

Query: 223 IILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAG 282
                      G     CPS                   +Q  +   YG     S    G
Sbjct: 131 ---------QEGHLSRDCPS-------------------SQGGSRGGYGQKRGRS-GAQG 185

Query: 283 TVRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN 342
                 +CYKCG  GH +RDC         P+ + G S +   TC+KCG  GH +RDC N
Sbjct: 191 GYSGDRTCYKCGDAGHISRDC---------PNGQGGYSGAGDRTCYKCGDAGHISRDCPN 185

BLAST of Lcy11g006910 vs. ExPASy Swiss-Prot
Match: P27484 (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.3e-07
Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 0

Query: 286 GSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN 342
           GS C+KCG  GH+ARDCSQS           G      G C+KCG+ GH+AR+C++
Sbjct: 156 GSGCFKCGESGHFARDCSQSGGGGGGGRFGGGGGGGGGGGCYKCGEDGHFARECTS 211

BLAST of Lcy11g006910 vs. ExPASy Swiss-Prot
Match: Q9NG98 (DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 GN=Top3alpha PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06
Identity = 49/197 (24.87%), Postives = 71/197 (36.04%), Query Frame = 0

Query: 164  NRGRKFYKCPVRQENGGCGFFEWCDN--ASATNVMSYGS--------------------- 223
            N GR +YKCP   E   C FF+W D   +SA +  S GS                     
Sbjct: 1053 NLGRLYYKCPKPDE---CNFFQWADEPPSSAKSKNSTGSAPQSTTSWGSNRVVTLPSIQQ 1112

Query: 224  -----------------------------QNRASSSSFSDLQCPCGAGPCIILTAKTGEN 283
                                         +N A+     ++ C CG     +   K G N
Sbjct: 1113 SNSQRGQSSMRSNSSSTVTITQTKTKQQERNTATPGDGEEVMCNCGQLASQLTVRKDGPN 1172

Query: 284  VGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYG--NTNDTSKSIAGTVRTGS-- 303
             G+ FY CP+ + +CGFF+W  E     +NQ +++  +G  N N   +S    + +    
Sbjct: 1173 QGRPFYACPTREKSCGFFKWGDE----DQNQGASSTSWGSANRNPPGRSQPTAITSDGPK 1232

BLAST of Lcy11g006910 vs. ExPASy TrEMBL
Match: A0A6J1JBZ0 (cold shock domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483073 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.8e-167
Identity = 290/346 (83.82%), Postives = 313/346 (90.46%), Query Frame = 0

Query: 1   MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKF 60
           MKFEAKRNFDF+  +DD+DEDFLSEVAAAEARALASKRRKIPNH+I+PPK  I EV++K 
Sbjct: 1   MKFEAKRNFDFDLGDDDDDEDFLSEVAAAEARALASKRRKIPNHTINPPKRAIAEVTNKV 60

Query: 61  SLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANST--AQSEGGGSCFKCGKLG 120
           S N D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN+T  AQS+GGGSCFKCGKLG
Sbjct: 61  SPNVDAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSDGGGSCFKCGKLG 120

Query: 121 HWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQE 180
           HWARDCDAPG GGSF+AS N DTSVAEK+CPCG GVC VLTANTERNRGRKFYKCPVRQE
Sbjct: 121 HWARDCDAPGSGGSFSASEN-DTSVAEKSCPCGRGVCVVLTANTERNRGRKFYKCPVRQE 180

Query: 181 NGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFY 240
           NGGCGFFEWCDNASATN+M+YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFY
Sbjct: 181 NGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFY 240

Query: 241 RCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH 300
           RCPSYQATCGFFQWCKEPSMA KNQ+SA+KVYGNT DTSK +  T R GSSCYKCGGEGH
Sbjct: 241 RCPSYQATCGFFQWCKEPSMAAKNQVSASKVYGNTTDTSKGMPATARAGSSCYKCGGEGH 300

Query: 301 WARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC 343
           WARDCSQS  PSNPP AEFGR+QSS  G+CFKCGKPGHWARDCSNC
Sbjct: 301 WARDCSQSLAPSNPPPAEFGRNQSSSAGSCFKCGKPGHWARDCSNC 345

BLAST of Lcy11g006910 vs. ExPASy TrEMBL
Match: A0A6J1EZ11 (cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111437513 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.8e-161
Identity = 282/345 (81.74%), Postives = 303/345 (87.83%), Query Frame = 0

Query: 1   MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKF 60
           MKFEAKRNFDF+  +DD+DEDFLSEVAAAEARALASKRRKIPNH+IDPPK  I EV+ K 
Sbjct: 1   MKFEAKRNFDFDLGDDDDDEDFLSEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60

Query: 61  SLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANST--AQSEGGGSCFKCGKLG 120
           S N+D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN+T  AQSEGGGSCFKCGKLG
Sbjct: 61  SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120

Query: 121 HWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQE 180
           HWARDCDAPG GGSF+ SGN DTSVAEK+CPCG+GVC VLTANTERNRGRKFYKCPVRQE
Sbjct: 121 HWARDCDAPGSGGSFSFSGN-DTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQE 180

Query: 181 NGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFY 240
           NGGCGFFEWCDNASATN+M+YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFY
Sbjct: 181 NGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFY 240

Query: 241 RCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH 300
           RCPSYQATCGFFQWCKE SMA KNQ+S +KVYGNT DTSK +  T R GSSCYKCGGEGH
Sbjct: 241 RCPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDTSKGMPATARAGSSCYKCGGEGH 300

Query: 301 WARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC 343
           WARDCSQS  PSN          SS G+CFKCGKPGHWARDCSNC
Sbjct: 301 WARDCSQSLAPSN--------QSSSAGSCFKCGKPGHWARDCSNC 336

BLAST of Lcy11g006910 vs. ExPASy TrEMBL
Match: A0A6J1C4N6 (DNA-binding protein HEXBP-like OS=Momordica charantia OX=3673 GN=LOC111008238 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.2e-156
Identity = 278/363 (76.58%), Postives = 297/363 (81.82%), Query Frame = 0

Query: 1   MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFS 60
           MK EAKRNF+F+ EDD+DEDFLS VAAAEARALASKRR+IPNH+IDPPK  I E      
Sbjct: 1   MKIEAKRNFEFDLEDDDDEDFLSAVAAAEARALASKRRRIPNHTIDPPKMAIAE------ 60

Query: 61  LNSDGEGLYIAALKGNPNVLSQISGRTANS-------GNKGFTSANSTAQSEGGGSCFKC 120
              + EGLY+AAL+G PN+ SQISG TANS        N+GF SAN TAQSEGGGSCFKC
Sbjct: 61  ---EPEGLYMAALRGKPNLPSQISGGTANSRAKGVAAANRGFVSANPTAQSEGGGSCFKC 120

Query: 121 GKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCP 180
           GKLGHWARDCDAPGGGGSF  +G TD SVAEKACPCGLGVC VLTANTERNRGRKFYKCP
Sbjct: 121 GKLGHWARDCDAPGGGGSFGTAG-TDASVAEKACPCGLGVCIVLTANTERNRGRKFYKCP 180

Query: 181 VRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVG 240
           VRQENGGCGFFEWCD+AS TNVM+YGSQNRASSS FSDL CPCGAG CIILTAKTGENVG
Sbjct: 181 VRQENGGCGFFEWCDSASGTNVMTYGSQNRASSSLFSDLMCPCGAGSCIILTAKTGENVG 240

Query: 241 QQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGT----------- 300
           QQFYRCPSYQ +CGFFQWCKEP MATKNQ++  K+YGN NDTSKS A T           
Sbjct: 241 QQFYRCPSYQESCGFFQWCKEPPMATKNQVNDYKIYGNANDTSKSFAPTPRTSSSIDASR 300

Query: 301 ---VRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDC 343
              VRTGSSCYKCGGEGHWARDCSQSHT SNPP AE GR+ S+ GTCFKC KPGHWARDC
Sbjct: 301 SFAVRTGSSCYKCGGEGHWARDCSQSHTSSNPPFAELGRNPSASGTCFKCSKPGHWARDC 353

BLAST of Lcy11g006910 vs. ExPASy TrEMBL
Match: A0A0A0KVB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G062410 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 9.2e-118
Identity = 225/318 (70.75%), Postives = 247/318 (77.67%), Query Frame = 0

Query: 27  AAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGR 86
           AAE  +L  K R +PN +ID PKN + EVS K  LN+D  G YIA  KG+   LSQISG 
Sbjct: 11  AAEVVSLVKKVRNVPNPTIDLPKNAVAEVSHKVPLNADFLGTYIAPYKGS-RALSQISGS 70

Query: 87  TANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKA 146
            A+S        N+TAQSEG GSCFKCGKLGHWARDCDAPGGGGSF++SGN D SV +KA
Sbjct: 71  EASSDKNVSIYENTTAQSEGDGSCFKCGKLGHWARDCDAPGGGGSFSSSGN-DMSVPDKA 130

Query: 147 CPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASS 206
           CPCG G+C VLTANTERNRGRKFYKCPVRQENGGCGFFEWCD+AS  NV+SYGSQN   S
Sbjct: 131 CPCGSGICSVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDSASVANVVSYGSQN-PLS 190

Query: 207 SSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSAN 266
           SSFSDLQCPCGAG C ILTAKTG NVG+QFY CPS QA+C FF+WC+EPSM TKNQ S  
Sbjct: 191 SSFSDLQCPCGAGSCKILTAKTGNNVGKQFYCCPSSQASCRFFRWCEEPSMETKNQESTP 250

Query: 267 KVYGNTNDTSKSIAGTVRT--GSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSH- 326
           KVYGNTNDTSKS    V+T   SS YK G EGHWARD SQS + S  P AE+GRSQSS  
Sbjct: 251 KVYGNTNDTSKSATLNVKTSSSSSSYKYGSEGHWARDWSQSPSSSTSP-AEYGRSQSSSA 310

Query: 327 GTCFKCGKPGHWARDCSN 342
           G+CFKCG PGHWARDCSN
Sbjct: 311 GSCFKCGMPGHWARDCSN 324

BLAST of Lcy11g006910 vs. ExPASy TrEMBL
Match: A0A2P5AI83 (DNA topoisomerase, type IA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_329900 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 9.0e-97
Identity = 194/350 (55.43%), Postives = 247/350 (70.57%), Query Frame = 0

Query: 1   MKFEAKRNF-DFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKF 60
           MK E K++F + + E+ +DEDFLS VAAAEA ALASKRR+I   + +         + + 
Sbjct: 1   MKMERKKSFIEVDEEEYDDEDFLSHVAAAEANALASKRRRITPSAANAIVFASPATAKQV 60

Query: 61  SLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFT--SANSTAQSEGGGSCFKCGKLG 120
           S ++D +G+Y+AALKGN  +   +   TA+   +G      +  A + GG SCFKCGK G
Sbjct: 61  SSSAD-DGVYLAALKGNQTL--PLRPTTASDPLRGRVPKGRDDEALAGGGDSCFKCGKSG 120

Query: 121 HWARDCDAPGGGGSF--NASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVR 180
           HWARDCD  GGGG    N  G  D S+ EK+CPCGLG+C VLTANTE+NRGRKFYKCP+R
Sbjct: 121 HWARDCDGGGGGGGHHGNYGGGGDPSIPEKSCPCGLGICTVLTANTEKNRGRKFYKCPLR 180

Query: 181 QENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQ 240
           QENGGCGFFEWCDN S  N M+ GS    S+SS+  LQCPCGAG C+ILTAK+G NVGQQ
Sbjct: 181 QENGGCGFFEWCDNVSGANSMAGGSY--TSNSSYPGLQCPCGAGLCMILTAKSGNNVGQQ 240

Query: 241 FYRCPSYQ-ATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGG 300
           FYRCP+ Q ++CGFF+WC E +++    ++++KV  N +DT+ S +  VRTGSSC+KCG 
Sbjct: 241 FYRCPANQGSSCGFFKWCNEQTVSVGRPVTSSKVSHNLSDTNNS-SYNVRTGSSCFKCGK 300

Query: 301 EGHWARDCSQSHTPSNPPSAEFG--RSQSSHGTCFKCGKPGHWARDCSNC 343
           EGHWARDCS    PS+ P+AE G     +S GTC+KCGKPGHW+RDC+ C
Sbjct: 301 EGHWARDCS---VPSSNPTAELGGRSGSASAGTCYKCGKPGHWSRDCTFC 341

BLAST of Lcy11g006910 vs. NCBI nr
Match: XP_023552737.1 (cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 600.5 bits (1547), Expect = 9.0e-168
Identity = 288/345 (83.48%), Postives = 311/345 (90.14%), Query Frame = 0

Query: 1   MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFS 60
           MKFEAKRNFDF+  DD+DEDFLSEVAAAEARALASKRRKIPNH+IDPPK  + EV+ K S
Sbjct: 1   MKFEAKRNFDFDLGDDDDEDFLSEVAAAEARALASKRRKIPNHTIDPPKRAVAEVTSKVS 60

Query: 61  LNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANST--AQSEGGGSCFKCGKLGH 120
            N+D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN+T  AQSEGGGSCFKCGKLGH
Sbjct: 61  PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH 120

Query: 121 WARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQEN 180
           WARDCDAPG GGSF+ASGN DTSVAEK+CPCG+GVC VLTANTERNRGRKFYKC VRQEN
Sbjct: 121 WARDCDAPGSGGSFSASGN-DTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCAVRQEN 180

Query: 181 GGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYR 240
           GGCGFFEWCDNAS+TN+M+YGSQNRASSSSFSDL+CPCGAG CI LTAKTG+NVGQQFYR
Sbjct: 181 GGCGFFEWCDNASSTNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGDNVGQQFYR 240

Query: 241 CPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHW 300
           CPSYQATCGFFQWCKEPSMA KNQ S +KVYGNT DTSK +  T R GSSCYKCGGEGHW
Sbjct: 241 CPSYQATCGFFQWCKEPSMAAKNQASGSKVYGNTTDTSKGMPATARAGSSCYKCGGEGHW 300

Query: 301 ARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC 343
           ARDCSQS  PSNPP AEFGR+QSS  G+CFKCGKPGHWARDCSNC
Sbjct: 301 ARDCSQSLAPSNPPPAEFGRNQSSSAGSCFKCGKPGHWARDCSNC 344

BLAST of Lcy11g006910 vs. NCBI nr
Match: XP_022984959.1 (cold shock domain-containing protein 3-like [Cucurbita maxima])

HSP 1 Score: 597.0 bits (1538), Expect = 9.9e-167
Identity = 290/346 (83.82%), Postives = 313/346 (90.46%), Query Frame = 0

Query: 1   MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKF 60
           MKFEAKRNFDF+  +DD+DEDFLSEVAAAEARALASKRRKIPNH+I+PPK  I EV++K 
Sbjct: 1   MKFEAKRNFDFDLGDDDDDEDFLSEVAAAEARALASKRRKIPNHTINPPKRAIAEVTNKV 60

Query: 61  SLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANST--AQSEGGGSCFKCGKLG 120
           S N D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN+T  AQS+GGGSCFKCGKLG
Sbjct: 61  SPNVDAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSDGGGSCFKCGKLG 120

Query: 121 HWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQE 180
           HWARDCDAPG GGSF+AS N DTSVAEK+CPCG GVC VLTANTERNRGRKFYKCPVRQE
Sbjct: 121 HWARDCDAPGSGGSFSASEN-DTSVAEKSCPCGRGVCVVLTANTERNRGRKFYKCPVRQE 180

Query: 181 NGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFY 240
           NGGCGFFEWCDNASATN+M+YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFY
Sbjct: 181 NGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFY 240

Query: 241 RCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH 300
           RCPSYQATCGFFQWCKEPSMA KNQ+SA+KVYGNT DTSK +  T R GSSCYKCGGEGH
Sbjct: 241 RCPSYQATCGFFQWCKEPSMAAKNQVSASKVYGNTTDTSKGMPATARAGSSCYKCGGEGH 300

Query: 301 WARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC 343
           WARDCSQS  PSNPP AEFGR+QSS  G+CFKCGKPGHWARDCSNC
Sbjct: 301 WARDCSQSLAPSNPPPAEFGRNQSSSAGSCFKCGKPGHWARDCSNC 345

BLAST of Lcy11g006910 vs. NCBI nr
Match: XP_038903890.1 (cold shock domain-containing protein 3-like [Benincasa hispida])

HSP 1 Score: 580.9 bits (1496), Expect = 7.4e-162
Identity = 288/344 (83.72%), Postives = 306/344 (88.95%), Query Frame = 0

Query: 1   MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFS 60
           MK EAKRNFDF+ E+DNDEDFLS VAAAEA ALASKRRKIPNH IDPPKN + EVSDK  
Sbjct: 1   MKSEAKRNFDFDLEEDNDEDFLSAVAAAEAVALASKRRKIPNHIIDPPKNAVAEVSDKIP 60

Query: 61  LNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWA 120
           LN++ EG+YIAALKGNP +LSQISG   NSGNKG  SAN+TAQSEGGGSCFKCGKLGHWA
Sbjct: 61  LNAEAEGIYIAALKGNPILLSQISGWKVNSGNKGSISANTTAQSEGGGSCFKCGKLGHWA 120

Query: 121 RDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGG 180
           RDCDAPGGGGSF+ASGN D SVAEKACPCGLGVC +LTANTERNRGRKFYKCPVRQENGG
Sbjct: 121 RDCDAPGGGGSFSASGN-DASVAEKACPCGLGVCSILTANTERNRGRKFYKCPVRQENGG 180

Query: 181 CGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCP 240
           CGFFEWCD  S   +M+YGSQNRASSSSFSD+QCPCGAG CIILTAKTGENVGQQFYRCP
Sbjct: 181 CGFFEWCD--SVPVMMNYGSQNRASSSSFSDIQCPCGAGSCIILTAKTGENVGQQFYRCP 240

Query: 241 SYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTG--SSCYKCGGEGHW 300
           SYQATCGFFQWCKEPSMATKNQ+SA+KVY NT+D SKS+A TVRTG  SSCYKCGGEGHW
Sbjct: 241 SYQATCGFFQWCKEPSMATKNQVSASKVYSNTSDASKSVAVTVRTGSSSSCYKCGGEGHW 300

Query: 301 ARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSN 342
           ARDCSQS    NPP  EFGRSQSS  GTCFKCGKPGHWARDC+N
Sbjct: 301 ARDCSQSLASPNPP--EFGRSQSSSLGTCFKCGKPGHWARDCAN 339

BLAST of Lcy11g006910 vs. NCBI nr
Match: KAG7015092.1 (DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 578.6 bits (1490), Expect = 3.7e-161
Identity = 281/343 (81.92%), Postives = 301/343 (87.76%), Query Frame = 0

Query: 1   MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFS 60
           MKFEAKRNFDF+  DD+DEDFLSEVAAAEARALASKRRKIPNH+IDPPK  I EV+ K S
Sbjct: 1   MKFEAKRNFDFDLGDDDDEDFLSEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS 60

Query: 61  LNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANST--AQSEGGGSCFKCGKLGH 120
            N+D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN+T  AQSEGGGSCFKCGKLGH
Sbjct: 61  PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH 120

Query: 121 WARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQEN 180
           WARDCDAPG GGSF+ASGN DTSVAEK+CPCG+GVC VLTANTERNRGRKFYKCPVRQEN
Sbjct: 121 WARDCDAPGSGGSFSASGN-DTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN 180

Query: 181 GGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYR 240
           GGCGFFEWCDNASATN+M+YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFYR
Sbjct: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240

Query: 241 CPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHW 300
           CPSYQATCGFFQWCKE SMA KNQ+S +KVYGNT D SK +  T R GSSCYKCGGEGHW
Sbjct: 241 CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHW 300

Query: 301 ARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN 342
           ARDCSQS  PSN          SS G+CFKCGKPGHWARDCSN
Sbjct: 301 ARDCSQSLAPSN--------QSSSAGSCFKCGKPGHWARDCSN 334

BLAST of Lcy11g006910 vs. NCBI nr
Match: XP_022931285.1 (cold shock domain-containing protein 3-like [Cucurbita moschata])

HSP 1 Score: 578.6 bits (1490), Expect = 3.7e-161
Identity = 282/345 (81.74%), Postives = 303/345 (87.83%), Query Frame = 0

Query: 1   MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKF 60
           MKFEAKRNFDF+  +DD+DEDFLSEVAAAEARALASKRRKIPNH+IDPPK  I EV+ K 
Sbjct: 1   MKFEAKRNFDFDLGDDDDDEDFLSEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60

Query: 61  SLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANST--AQSEGGGSCFKCGKLG 120
           S N+D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN+T  AQSEGGGSCFKCGKLG
Sbjct: 61  SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120

Query: 121 HWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQE 180
           HWARDCDAPG GGSF+ SGN DTSVAEK+CPCG+GVC VLTANTERNRGRKFYKCPVRQE
Sbjct: 121 HWARDCDAPGSGGSFSFSGN-DTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQE 180

Query: 181 NGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFY 240
           NGGCGFFEWCDNASATN+M+YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFY
Sbjct: 181 NGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFY 240

Query: 241 RCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH 300
           RCPSYQATCGFFQWCKE SMA KNQ+S +KVYGNT DTSK +  T R GSSCYKCGGEGH
Sbjct: 241 RCPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDTSKGMPATARAGSSCYKCGGEGH 300

Query: 301 WARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC 343
           WARDCSQS  PSN          SS G+CFKCGKPGHWARDCSNC
Sbjct: 301 WARDCSQSLAPSN--------QSSSAGSCFKCGKPGHWARDCSNC 336

BLAST of Lcy11g006910 vs. TAIR 10
Match: AT3G42860.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 238.4 bits (607), Expect = 8.4e-63
Identity = 139/328 (42.38%), Postives = 185/328 (56.40%), Query Frame = 0

Query: 16  DNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKG 75
           D ++DFL ++AA EA A A + R                      ++S  EG Y+AALKG
Sbjct: 12  DEEDDFLLQLAAIEAEAAAKRPR----------------------VSSIPEGPYMAALKG 71

Query: 76  NPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNAS 135
           + +   Q      N  +K    + S A + GG                 + GGGG    +
Sbjct: 72  SKS--DQWQQSPLNPASK----SRSVAVTTGGFQ--------------RSDGGGG---VA 131

Query: 136 GNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCD--NASAT 195
           G  D    EK+CPCG+G+C +LT+NT +N GRKFYKCP R+ENGGCGFF+WCD   +S T
Sbjct: 132 GEQD--FPEKSCPCGVGICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGT 191

Query: 196 NVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCK 255
           +  +  S    + + F D QCPCGAG C +LTAKTGENVG+QFYRCP ++ +CGFF+WC 
Sbjct: 192 STTTSNSYGNGNDTKFPDHQCPCGAGLCRVLTAKTGENVGRQFYRCPVFEGSCGFFKWCN 251

Query: 256 EPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARDCS-QSHTPSNPP 315
           +  +++    S  K   N  D+        +TG+ CYKCG EGHWARDC+ QS T     
Sbjct: 252 DNVVSSPTSYSVTK-NSNFGDSDTRGYQNAKTGTPCYKCGKEGHWARDCTVQSDTGP--- 284

Query: 316 SAEFGRSQSSHGTCFKCGKPGHWARDCS 341
                +S S+ G CFKCGKPGHW+RDC+
Sbjct: 312 ----VKSTSAAGDCFKCGKPGHWSRDCT 284

BLAST of Lcy11g006910 vs. TAIR 10
Match: AT5G13920.1 (GRF zinc finger / Zinc knuckle protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-18
Identity = 54/155 (34.84%), Postives = 70/155 (45.16%), Query Frame = 0

Query: 99  NSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLT 158
           N T Q+   G CF+C + GHW  DC              TD       CPCG G C +  
Sbjct: 3   NGTMQT---GDCFRCRQAGHWINDCP---------LKSYTDDPPPAIQCPCGGGFCEIKV 62

Query: 159 ANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGA 218
           ANT  N GRKFYKCP  Q    C FF+WCD  +  ++            +F+   C CGA
Sbjct: 63  ANTRENPGRKFYKCPTAQ---NCCFFKWCDKVTDEDI--------KFRPAFTIPICSCGA 122

Query: 219 GPCIILTAKTGENVGQQFYRCPSYQ--ATCGFFQW 252
           GPC     +  +  G+ +  C   +    CGFF+W
Sbjct: 123 GPC----RRVKDVSGRAYLICCIKKGFGACGFFKW 130

BLAST of Lcy11g006910 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-10
Identity = 84/296 (28.38%), Postives = 107/296 (36.15%), Query Frame = 0

Query: 55  VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCG 114
           VSD F   + GE +      G+      I   TA  G       NS+  S  GG+CF CG
Sbjct: 44  VSDGFRSLTLGESVEYEIALGSDGKTKAIE-VTAPGGGSLNKKENSSRGS--GGNCFNCG 103

Query: 115 KLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTE--------RNRG 174
           ++GH A+DCD   GG SF   G   +    +   CG    F                  G
Sbjct: 104 EVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNSGGGGGGG 163

Query: 175 RKFYKCPVRQENGGCGFF-EWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILT 234
           R  Y C      G  G   + C   S  N   YG      S       C           
Sbjct: 164 RPCYSC------GEVGHLAKDCRGGSGGN--RYGGGGGRGSGGDGCYMCGGVGHFARDCR 223

Query: 235 AKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRT 294
              G NVG     C     TCG      +                    TSK  +G    
Sbjct: 224 QNGGGNVGGGGSTC----YTCGGVGHIAKVC------------------TSKIPSGGGGG 283

Query: 295 GSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN 342
           G +CY+CGG GH ARDC +  + S+      G    S+  CF CGK GH+AR+C++
Sbjct: 284 GRACYECGGTGHLARDCDRRGSGSS------GGGGGSN-KCFICGKEGHFARECTS 299

BLAST of Lcy11g006910 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 59.7 bits (143), Expect = 5.3e-09
Identity = 82/313 (26.20%), Postives = 114/313 (36.42%), Query Frame = 0

Query: 55  VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGN--KGFTSANSTAQSEGGGS-CF 114
           VS+ +   + G+ +  A  +G+      ++      G+  K   S  + A+  GGGS C+
Sbjct: 44  VSEGYRSLTVGDAVEFAITQGSDGKTKAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCY 103

Query: 115 KCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRK-FY 174
            CG+LGH ++DC   GGGG                                R+RG +  Y
Sbjct: 104 NCGELGHISKDCGIGGGGG----------------------------GGERRSRGGEGCY 163

Query: 175 KCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGE 234
            C      G  G F   D  SA N        R ++   +D    CG             
Sbjct: 164 NC------GDTGHFA-RDCTSAGN-----GDQRGATKGGNDGCYTCG------------- 223

Query: 235 NVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTND-----TSKSIAGTVRT 294
           +VG     C       G      +   A K         G+        T K  AG VR+
Sbjct: 224 DVGHVARDCTQKSVGNG------DQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRS 283

Query: 295 G----SSCYKCGGEGHWARDCSQSHTPSN-----PPSAEFGRSQSSHGT--------CFK 342
           G     +CY CGG GH ARDC+    PS        S    R     G+        C+K
Sbjct: 284 GGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYK 297

BLAST of Lcy11g006910 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-06
Identity = 56/248 (22.58%), Postives = 86/248 (34.68%), Query Frame = 0

Query: 106 GGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLG-VCFVLTANTERN 165
           G  SC+ CG+ GH + +C  P              S+   A  C  G  C++      + 
Sbjct: 164 GWVSCYSCGEQGHTSFNCPTP---TKRRKPCFICGSLEHGAKQCSKGHDCYIC-----KK 223

Query: 166 RGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIIL 225
            G +   CP + +NG  G    C             +   S     D+QC          
Sbjct: 224 TGHRAKDCPDKYKNGSKGAV--CLRCGDFGHDMILCKYEYSKEDLKDVQC---------- 283

Query: 226 TAKTGENVGQQFYRCPSYQATC-----GFFQW---CKEPSMATKNQMSANKVYGNTNDTS 285
                       Y C S+   C         W   C        + ++  + Y  +N+  
Sbjct: 284 ------------YICKSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGLACGRHYEESNEND 343

Query: 286 KSIAGTV---RTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPG 342
            +    +   R  S CY+CG EGH+AR+C       N  S      + S   C++C   G
Sbjct: 344 SATPERLFNSREASECYRCGEEGHFAREC------PNSSSISTSHGRESQTLCYRCNGSG 373

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94C691.8e-0928.38Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P... [more]
O656397.5e-0826.20Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1[more]
Q048321.7e-0725.42DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1[more]
P274846.3e-0746.43Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1[more]
Q9NG981.4e-0624.87DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 GN=Top3alpha PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A6J1JBZ04.8e-16783.82cold shock domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1EZ111.8e-16181.74cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1C4N62.2e-15676.58DNA-binding protein HEXBP-like OS=Momordica charantia OX=3673 GN=LOC111008238 PE... [more]
A0A0A0KVB69.2e-11870.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G062410 PE=4 SV=1[more]
A0A2P5AI839.0e-9755.43DNA topoisomerase, type IA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_329900... [more]
Match NameE-valueIdentityDescription
XP_023552737.19.0e-16883.48cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo][more]
XP_022984959.19.9e-16783.82cold shock domain-containing protein 3-like [Cucurbita maxima][more]
XP_038903890.17.4e-16283.72cold shock domain-containing protein 3-like [Benincasa hispida][more]
KAG7015092.13.7e-16181.92DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022931285.13.7e-16181.74cold shock domain-containing protein 3-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT3G42860.18.4e-6342.38zinc knuckle (CCHC-type) family protein [more]
AT5G13920.11.3e-1834.84GRF zinc finger / Zinc knuckle protein [more]
AT2G17870.11.3e-1028.38cold shock domain protein 3 [more]
AT4G36020.15.3e-0926.20cold shock domain protein 1 [more]
AT3G43590.12.5e-0622.58zinc knuckle (CCHC-type) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 109..125
e-value: 5.7E-5
score: 32.5
coord: 288..304
e-value: 2.8E-5
score: 33.5
coord: 325..341
e-value: 2.1E-6
score: 37.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 109..124
e-value: 2.0E-7
score: 30.8
coord: 324..340
e-value: 3.7E-8
score: 33.1
coord: 288..304
e-value: 8.4E-8
score: 32.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 110..123
score: 10.608721
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 326..341
score: 11.004309
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 289..304
score: 10.674652
NoneNo IPR availableGENE3D4.10.60.10coord: 283..315
e-value: 9.1E-8
score: 33.6
coord: 316..341
e-value: 4.6E-8
score: 34.6
coord: 102..133
e-value: 6.9E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR33680OS07G0190500 PROTEINcoord: 271..313
coord: 99..201
coord: 201..262
NoneNo IPR availablePANTHERPTHR33680:SF4ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 271..313
coord: 306..339
NoneNo IPR availablePANTHERPTHR33680:SF4ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 99..201
coord: 201..262
NoneNo IPR availablePANTHERPTHR33680OS07G0190500 PROTEINcoord: 306..339
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 146..189
e-value: 4.0E-15
score: 55.6
coord: 213..254
e-value: 5.2E-15
score: 55.3
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 91..128
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 285..341

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g006910.1Lcy11g006910.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding