Lcy11g004800 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g004800
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCaspase-6 protein
LocationChr11: 4644385 .. 4648421 (-)
RNA-Seq ExpressionLcy11g004800
SyntenyLcy11g004800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGGCGCTCTTCTGGATCTCTGTCTCGATCGTTAATTTCCACTGTTAGAGCTTCTTCTCTTCGCTCGGCTCCTTCTCTTCCTCGGCTCCGCCCGCCACCTCTCGCCGCTCGACCTCGCCTTCAATCTCGCCGACTTTCATTTTCGACTTCGAGGTACTTCACAAGTTTCTAAATTGGCTATTTGGTTTTCGTGCGAAACGAATTCGACGAATGAATTAATAGAGAAGAAATGCCAGATGCCTGTTTCTTTTGTTGTTTTGATCTCTGTTTACTCTTGATTTCTACTTTTTAAATTTTTATTTATTTTAATTCTATGAGAAATAAATTTCTTTCATCAATATATTTTAGGTTAAATTTCATTTTTACTATTTATGTTCAACCTTAATTTTCATGCATTTCAAAGTTTATGACAAAGAGCTACTTGTCAAAATATCTGTGATTGCATTCGAAAATGAGTGACATTATCCGTTGCATTTCAAAGCGACATTGGACTTTACCATTTTAAGTCAAAATAATGTTTTAAAACCCAGAAATTCACGTGTTTCATCAAGTATAACTTTTCACATCCGAGGTTATTAAAACAACACGTCACTTGATGGTGCCCGTTTAAATATAAGCCATAATCAAACGATGGAGACACTGATGAAGTTTTTAGATGTATAGGGACCAACTAAAAATTAATTTATCGTAAAATTACGATGGGAAACCAAACATTTTAGGAGCTTACTGAAGGAGGTTAATGTAGGAAGGAATGTAGTTACGAAATAATTTTGTGCTAGAGATGCAGAGGGAAACAAACAAACAAATATTGTCCCAAATTAAGTAGATCTCTTTATACTTCTTTTGGAACATTTTACTATTTCTTTTCAACAATGTTACCACATAACTACACTAGAAGCATTAATCCAAGTTGAAGCGAGAAGAAAAGTTGACTTTGGGCTTTTGGGTGCCCATACAATTTCTCTGAGAAGGGAGTAGAGTAGCCACCTACTGGAGCTTCTATCAACTACCATTGGTCATTTTCGCTTTGGGGCCACCCCTTACATTACCATTATTATAGGGGTAGGATGTTCATGCCGAAGAAAGATCTTGAGCATAGAACCACAAGACAGTGTGTAAAGTTTATCCTTACCAAAGAGAGGCATCGCCCAGTGGTTTGAAATATAACGAAGAAGGAAAAAAAAAAGCCATCATATTTGCTTTGAGATGAGCTGGTGAAAAAAGGGGCGGTTAGCATTTTCAACTTGATTATTGCTTGAAGCACGTGAGAACCCAAGGAATTCGAGCCCTAGCATTAGTCTTTCCGTGTTTAGCTTCCAAAGTCACTTGTACTATATTCGCTCCCAACAACCTTATGCCATAAAGAATTAGCATCTGCTGTGTATCTCCAAGGTCATTTAGTTAGAAGAGTATCATTTCTAGCTGCTATGTTACCATAGCCAAGACTTGAAACTCCTAAAGAAGGAAAATGATCTTCCAATTTATGAGGTGACACTCTCGGTCTTAGTGTGCATCCCTTCCAAAAAAAAATTTCCAATGGCTTTTGCTATATCTCTAGCTACACTTTCGGGAGCTTTGGAAACTGATAGGAAGTATGTGAGATTTTCCCTCCCTGCTTTCTTTGCAGGATTGGGAACAATATAGAGATCGAGGGATCTTCCTGGCTAGTTGATTGAGGATGGTCTTCCTGGCCTAATTCCTTTCACAACTAGTAATATCTTTAATCATCTCCCCTTCCTTACCTACTAAGTTTTGGCTTTGAATTTAACTATCATTTTCTTTTCTAGACCCTGCTAATTCTAACCTCTGTTTCCAACTAGCGGGGAATATTAACACCAATTCTTATGCTTCCCAACTTCGACACATTTCAACCAATGACTTCTTGGTAGTTGTCAATTTCCTGAGGATCATATTGCACTGGACACTGGTTTGGTCTTCTGAGTTGGTGTCTGGTGATATCATTGTCTTCTATCACTACAGTGGACTTGGTCTCCTCCATGGTAACTTCAGTGGTCGGATGTTTCAGTGACCACTTTATCATCGATCCATTACAAGAACAAAATACGGCCTTTCTTTTAAATGAATGGTTGTGAACCTTAACAGCTTCTGAGAATCTAGGGGAATTACTCTGCAGGGATTCACCGCCTGTCAAGTATCTTTTTATCTTGATTGTAGCCTCAACTCCAGCATTGCCTCTACAAGGATACAGCCTTTCAAGTTTTTTAATCTTAATTATAGCCTTCTAAATTGTGCTGAGCTCAAAGTTCTTAATCACATGAAAAGGAACCACGCAAACATTTCCAATGTATTCCAGAGTCTCCCCCATTCCTTCTGTTGACCAACAAATTTCTCACATGATTATCTCTCACGAAAAACCTTGATTAGAAGGCTCTTTTTTGTAGTCCTTTTGGGGCAGTGGTTTTCTCTTCCCCCGCTCTTTGATGTGTTTTCTATAATTCAGTTTCTCATTAAAAAAAAATCTCTCTAATACTTGCTCTATGGTGCTTGATTTTTTCTGGATTTCTTTCATGTGTTAGAGGCATGATTTTCTCCTTTTTGTTTAAAATTGTCCTTTCCAGGAATTTGGGAGAACTGGGATGCACGCAGTCTCTTCTGCCCATGCACATCATAGGTGCTTCCTGCCTGACATCCCACCTATGTGTTAGCGCACGGGCTTTTTGCGAGCTGTCTCACGGTACCTTCTGCCGTACTTGTCAGGATCGCTAGTATCCTCTTTGTGAGTCTTGTTTATGGGAAGCATGAAAAACATATAGTAAATGTTTCTTCATGAGGTCATTATTCAGTGTGACCATTTATAATCATGATGTCATAACATTTCAGCAAATTTGTGTTTGGATCATATGATGTGGCATAACTTAGGCAGTTATTTTTATACCATTAAAATGTCATTTAATAAGAAAAAATTGGGATTGGGATTGATAGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATCATTCGAAAGCAGGAGACTCTCAACATTTGTAGGTCCCTTTTATTTTGGCTTTTTGATTCTTTTCCCCTTCATTTTTCACTTTCTAGTAGTATTTTTTGTGTACTCTTCTAAACTTCATAAAAAACTTTAGATATTAGAAGTGGCGATGGTGAGTATATGCAGTTGAGGTGGGTGAAGAGGGAAGAGACACATCTATGGGAAGAGAGGAAGAGGATGTTTGATCCTGTTTAATGAATTTAACTTCTTTTAGTTGTCACTTTATTTAATTCCTTCAATGGAGGAAGTGAAGAAATATTGAGGTGTGATAATAGTCAGTCAGATAACTTGCTCACTTGAATCCTCTTAGAAGAAGGCATTTGAGGATGATGTGGGCATACATCTTCTAAGATTATTATCAAGGATGATGTTCAAAGCTTCTGCCATGATGGATGATACTTCATCTCAATCATATGCATAAAGCTTTTGAGTTGACCTTTCTTGTTACTTCCCTATAGAAAATCTGTTTGTTGTTGTTAGCTAAGCGTACTGTTAAGCCATGGTAGTCTCAATGTTTGAAAGAAAAAAGGGATTTCATTAGATATGGAACTGTGCGCAGAACGTTATCTGTGGATGATATTTTTGTGATATATACTTTCAGAGTCATGAGGTGTTTCATCATTGAAGAAGCGTGCTTCAATTACAAAGAACTCGAATTTAAATTGTAAGATGTTCATGTGTTTATGAAGTTCTTATGCTCTTCCTTTTGTTTTACATTGCAGGTACTTGAGTGATCTTCAGTGGAAGCACACGTGCGAGCAATTCTATGTGGGGTGAAGTTGAGTAGAGGGAGAGAGAGTTTCTGGTAACTTTATTAGGTAGGTAGATGTAATAAAAAAGATTTCTAGCTGTTCAGGGAATTCATCCTATTTTTCCACACAGTACTTGGTTTTGCCTATGGATTCCCTAAAAATGATCGATTGTTGATTATATGACCTACTTGTTTCGTCTGAGGCTGAATTTTGTAATTATTTACCTTCATTTACTTTCATACCAGTTGCTGGATTTGGA

mRNA sequence

ATGGCTTGGCGCTCTTCTGGATCTCTGTCTCGATCGTTAATTTCCACTGTTAGAGCTTCTTCTCTTCGCTCGGCTCCTTCTCTTCCTCGGCTCCGCCCGCCACCTCTCGCCGCTCGACCTCGCCTTCAATCTCGCCGACTTTCATTTTCGACTTCGAGGAATTTGGGAGAACTGGGATGCACGCAGTCTCTTCTGCCCATGCACATCATAGGTGCTTCCTGCCTGACATCCCACCTATGTGTTAGCGCACGGGCTTTTTGCGAGCTGTCTCACGGTACCTTCTGCCGTACTTGTCAGGATCGCTAGTATCCTCTTTGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATCATTCGAAAGCAGGAGACTCTCAACATTTGTACTTGAGTGATCTTCAGTGGAAGCACACGTGCGAGCAATTCTATGTGGGGTGAAGTTGAGTAGAGGGAGAGAGAGTTTCTGGTAACTTTATTAGGTAGGTAGATGTAATAAAAAAGATTTCTAGCTGTTCAGGGAATTCATCCTATTTTTCCACACAGTACTTGGTTTTGCCTATGGATTCCCTAAAAATGATCGATTGTTGATTATATGACCTACTTGTTTCGTCTGAGGCTGAATTTTGTAATTATTTACCTTCATTTACTTTCATACCAGTTGCTGGATTTGGA

Coding sequence (CDS)

ATGGCTTGGCGCTCTTCTGGATCTCTGTCTCGATCGTTAATTTCCACTGTTAGAGCTTCTTCTCTTCGCTCGGCTCCTTCTCTTCCTCGGCTCCGCCCGCCACCTCTCGCCGCTCGACCTCGCCTTCAATCTCGCCGACTTTCATTTTCGACTTCGAGGAATTTGGGAGAACTGGGATGCACGCAGTCTCTTCTGCCCATGCACATCATAGGTGCTTCCTGCCTGACATCCCACCTATGTGTTAGCGCACGGGCTTTTTGCGAGCTGTCTCACGGTACCTTCTGCCGTACTTGTCAGGATCGCTAG

Protein sequence

MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLLPMHIIGASCLTSHLCVSARAFCELSHGTFCRTCQDR
Homology
[Close]
BLAST of Lcy11g004800 vs. ExPASy TrEMBL
Match: A0A6J1FMT0 (uncharacterized protein LOC111446884 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446884 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0 

Query: 1   MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR SGSLSRSLISTVRASSLRSAPSLPRL PPPLAARPRLQSRRLSFSTSRNLGELGC
Sbjct: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61  TQSLLPMHIIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           TQSLL MHI+GA+CLTSHLCVS RAFCELSHGTFCRTCQDR
Sbjct: 61  TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRTCQDR 101

[Close]
BLAST of Lcy11g004800 vs. ExPASy TrEMBL
Match: A0A6J1D7P5 (uncharacterized protein LOC111017781 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017781 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 6   SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 65
           SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL
Sbjct: 5   SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 64

Query: 66  PMH-IIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           PMH I+GA+CLTSHLCVSARAFCELSHGTFCRTCQDR
Sbjct: 65  PMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 101

[Close]
BLAST of Lcy11g004800 vs. ExPASy TrEMBL
Match: A0A6J1J270 (uncharacterized protein LOC111482036 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482036 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.1e-42
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60
          MAWR SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61 TQSLLPMHIIGASCLTSHLCVSARAFCELSHGTFCRT 98
          TQSLL MHI+GA+CLTSHLCVS RAFCELSHGTFCRT
Sbjct: 61 TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRT 97

[Close]
BLAST of Lcy11g004800 vs. ExPASy TrEMBL
Match: A0A6J1J861 (uncharacterized protein LOC111482625 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482625 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.8e-41
Identity = 91/102 (89.22%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSR+LIS+VR SSLRS+PSLPRLR PPL ARPRLQSRRL+FSTSRNLGELGC
Sbjct: 1   MAWRSSGSLSRALISSVRFSSLRSSPSLPRLRLPPLTARPRLQSRRLAFSTSRNLGELGC 60

Query: 61  TQSLLPMH-IIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           TQSLLPMH I+GA+CLTSHLCV ARAFCELSHGTFCRTCQDR
Sbjct: 61  TQSLLPMHSIMGATCLTSHLCVGARAFCELSHGTFCRTCQDR 102

[Close]
BLAST of Lcy11g004800 vs. ExPASy TrEMBL
Match: A0A6J1IZB9 (uncharacterized protein LOC111482036 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482036 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.3e-39
Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60
          MAWR SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61 TQSLLPMHIIGASCLTSHLCVSARAFCELSHGT 94
          TQSLL MHI+GA+CLTSHLCVS RAFCELSHGT
Sbjct: 61 TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGT 93

[Close]
BLAST of Lcy11g004800 vs. NCBI nr
Match: XP_022941567.1 (uncharacterized protein LOC111446884 isoform X1 [Cucurbita moschata] >XP_022941568.1 uncharacterized protein LOC111446884 isoform X2 [Cucurbita moschata] >KAG7030962.1 hypothetical protein SDJN02_04999 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187.2 bits (474), Expect = 7.0e-44
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0 

Query: 1   MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR SGSLSRSLISTVRASSLRSAPSLPRL PPPLAARPRLQSRRLSFSTSRNLGELGC
Sbjct: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61  TQSLLPMHIIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           TQSLL MHI+GA+CLTSHLCVS RAFCELSHGTFCRTCQDR
Sbjct: 61  TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRTCQDR 101

[Close]
BLAST of Lcy11g004800 vs. NCBI nr
Match: XP_038882967.1 (uncharacterized protein LOC120074027 isoform X1 [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 1.6e-43
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSRSLIS+VRASSLRSAPSLPRLRPPPLAARPR QSRRLSFSTSRNLGELGC
Sbjct: 1   MAWRSSGSLSRSLISSVRASSLRSAPSLPRLRPPPLAARPRPQSRRLSFSTSRNLGELGC 60

Query: 61  TQSLLPMH-IIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           TQSLLPMH I+GA+CLTSHLCVSARAFCELSHGTFCRTCQDR
Sbjct: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 102

[Close]
BLAST of Lcy11g004800 vs. NCBI nr
Match: XP_023512880.1 (uncharacterized protein LOC111777483 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512888.1 uncharacterized protein LOC111777483 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 94/101 (93.07%), Postives = 97/101 (96.04%), Query Frame = 0 

Query: 1   MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR SGSLSRSLISTVRASSLRSAPSLPRL PPPLAARPRLQSRRLSFSTSRNLGELGC
Sbjct: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61  TQSLLPMHIIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           TQSLL MHI+GA+CLTSHLCVS RAFCELSHGTFCR+CQDR
Sbjct: 61  TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 101

[Close]
BLAST of Lcy11g004800 vs. NCBI nr
Match: XP_022149347.1 (uncharacterized protein LOC111017781 isoform X1 [Momordica charantia] >XP_022149348.1 uncharacterized protein LOC111017781 isoform X1 [Momordica charantia])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 6   SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 65
           SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL
Sbjct: 5   SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 64

Query: 66  PMH-IIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           PMH I+GA+CLTSHLCVSARAFCELSHGTFCRTCQDR
Sbjct: 65  PMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR 101

[Close]
BLAST of Lcy11g004800 vs. NCBI nr
Match: XP_022983431.1 (uncharacterized protein LOC111482036 isoform X1 [Cucurbita maxima])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60
          MAWR SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61 TQSLLPMHIIGASCLTSHLCVSARAFCELSHGTFCRT 98
          TQSLL MHI+GA+CLTSHLCVS RAFCELSHGTFCRT
Sbjct: 61 TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRT 97

[Close]
BLAST of Lcy11g004800 vs. TAIR 10
Match: AT2G15000.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22
Identity = 64/105 (60.95%), Postives = 79/105 (75.24%), Query Frame = 0 

Query: 1   MAWRSSGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGE 60
           MAWR++GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG 
Sbjct: 1   MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61  LGCTQSLLPMH-IIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           LGCTQS LP++ ++  S LTSHL V+ RAFCELS+GTF RTCQDR
Sbjct: 61  LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGTFQRTCQDR 101

[Close]
BLAST of Lcy11g004800 vs. TAIR 10
Match: AT2G15000.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22
Identity = 64/105 (60.95%), Postives = 79/105 (75.24%), Query Frame = 0 

Query: 1   MAWRSSGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGE 60
           MAWR++GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG 
Sbjct: 1   MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61  LGCTQSLLPMH-IIGASCLTSHLCVSARAFCELSHGTFCRTCQDR 102
           LGCTQS LP++ ++  S LTSHL V+ RAFCELS+GTF RTCQDR
Sbjct: 61  LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGTFQRTCQDR 101

[Close]
BLAST of Lcy11g004800 vs. TAIR 10
Match: AT2G15000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 2.4e-18
Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGE 60
          MAWR++GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPMH-IIGASCLTSHLCVSARAFCELSHGT 94
          LGCTQS LP++ ++  S LTSHL V+ RAFCELS+GT
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93

[Close]
BLAST of Lcy11g004800 vs. TAIR 10
Match: AT2G15000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 9.2e-18
Identity = 56/96 (58.33%), Postives = 71/96 (73.96%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGE 60
          MAWR++GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPMH-IIGASCLTSHLCVSARAFCELSHG 93
          LGCTQS LP++ ++  S LTSHL V+ RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

[Close]
BLAST of Lcy11g004800 vs. TAIR 10
Match: AT2G15000.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 9.2e-18
Identity = 56/96 (58.33%), Postives = 71/96 (73.96%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGE 60
          MAWR++GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPMH-IIGASCLTSHLCVSARAFCELSHG 93
          LGCTQS LP++ ++  S LTSHL V+ RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

The following BLAST results are available for this feature:
BLAST of Lcy11g004800 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy11g004800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FMT03.4e-4494.06uncharacterized protein LOC111446884 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1D7P55.4e-4296.91uncharacterized protein LOC111017781 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1J2707.1e-4294.85uncharacterized protein LOC111482036 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1J8617.8e-4189.22uncharacterized protein LOC111482625 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IZB94.3e-3994.62uncharacterized protein LOC111482036 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Lcy11g004800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941567.17.0e-4494.06uncharacterized protein LOC111446884 isoform X1 [Cucurbita moschata] >XP_0229415... [more]
XP_038882967.11.6e-4395.10uncharacterized protein LOC120074027 isoform X1 [Benincasa hispida][more]
XP_023512880.12.0e-4393.07uncharacterized protein LOC111777483 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022149347.11.1e-4196.91uncharacterized protein LOC111017781 isoform X1 [Momordica charantia] >XP_022149... [more]
XP_022983431.11.5e-4194.85uncharacterized protein LOC111482036 isoform X1 [Cucurbita maxima][more]
BLAST of Lcy11g004800 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G15000.41.2e-2260.95unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.51.2e-2260.95unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.12.4e-1858.76unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.29.2e-1858.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.39.2e-1858.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..43
NoneNo IPR availablePANTHERPTHR33156:SF26OS12G0592200 PROTEINcoord: 1..100
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g004800.1Lcy11g004800.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane