Lcy11g001630 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g001630
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Remorin family protein
Location	Chr11: 1643700 .. 1644604 (+)
RNA-Seq Expression	Lcy11g001630
Synteny	Lcy11g001630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCCGGAAGCACAAGCGATCAGAAGAACGAATTAAAAATTAAGGCTTGGGAAGATAGAGAAAAAATCAAAGCCGACAACAAGTCAGTTCCCTCTCTCTCCTCTCTATTTTAACATTATCTTTAGGGTTATTTTGATTTCATTTACGATTTTTTTTTTTTTTTTCTTGAGTTGGACCAAGATTTGAACCTTTGACCATCTAGTTGAATATATAATATTTTCTATCAATTTGGTTATGCTCAACGTGCAGAACTTAGTACAGTGGATAAGACACCAATTACCATTTCAAAAGTCAATGATTCGATTTCCACCCATAAAATTCTTGAAATTAAAAAAATGATATTACACACCTTTAAACAACATAAACTTGATTATTACATTTACAAAGATCCAAATACTCAAAAAAGTACATTAGAAATGTGAATTTTACCAACCCTTTTTACTTTTCACTAAGTTGAAGTCTTTGAAATAAAATTGTGCAGAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGTAAATTAAATTCCATTATTATTCATAATTTTTATCCTAATTAAGTTTTGAAACCCTAATGAAAATGGAGTATTAATTTCATATATATATTTATATATTATATGGGGAAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCACAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAACAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTGCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAGCTACTTATTAATTATAGCGTTTTTCAA

mRNA sequence

ATGGTAGCCGGAAGCACAAGCGATCAGAAGAACGAATTAAAAATTAAGGCTTGGGAAGATAGAGAAAAAATCAAAGCCGACAACAAAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCACAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAACAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTGCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAGCTACTTATTAATTATAGCGTTTTTCAA

Coding sequence (CDS)

ATGGTAGCCGGAAGCACAAGCGATCAGAAGAACGAATTAAAAATTAAGGCTTGGGAAGATAGAGAAAAAATCAAAGCCGACAACAAAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCACAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAACAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTGCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAG

Protein sequence

MVAGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD

Homology

[Close]

BLAST of Lcy11g001630 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-18
Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 2   VAGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEK 61
           V      +K    IKAWE+ EK K +NKAE+KL+S  +W++ KK+A+EAE+KK+E  LEK
Sbjct: 84  VLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEK 143

Query: 62  MRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
            + + +E++KNK A+ HK  E K+A IEA R  +  K EE AAK+R+  T P K FG
Sbjct: 144 KKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFG 200

[Close]

BLAST of Lcy11g001630 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.0e-17
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 2   VAGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEK 61
           V    + +K    IKAWE+ EK KA+NKA++K+++  AW+++KK+ LEAE+KK+E  LEK
Sbjct: 80  VLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEK 139

Query: 62  MRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGI 120
            + +  EK+KNK A  HK  E K+A IEA R     K EE AAK+R+  T P K  GI
Sbjct: 140 KKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKILGI 197

[Close]

BLAST of Lcy11g001630 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-15
Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 7   SDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKE 66
           S +K    ++AWE+ EK KA+NKAE+K+A   AW+++KK+A+EA++KKIE  LEK + + 
Sbjct: 99  SKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEY 158

Query: 67  MEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
            E++KNK A  HK  E ++A IEA R     K EE AAK+R+   VP    G
Sbjct: 159 AERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCG 210

[Close]

BLAST of Lcy11g001630 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 1   MVAGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLE 60
           ++      +K    IKAWE+ EK KA+N+A++K++   AW+++KK+A+EA+++KIE  LE
Sbjct: 71  VILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLE 130

Query: 61  KMRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
           K + +  EK+KNK A  HK  E K+A +EA +  +  K EE  AK+R+   VP    G
Sbjct: 131 KKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCG 188

[Close]

BLAST of Lcy11g001630 vs. ExPASy TrEMBL
Match: A0A0A0L6I9 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.1e-36
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 3   AGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKM 62
           A +T  +K E+KI+ WEDREKIKADNKAER+LASTEAWK++KK+ALEAEVKKI+ DL K+
Sbjct: 7   ASATDRRKIEIKIQVWEDREKIKADNKAERRLASTEAWKNSKKAALEAEVKKIDADLVKL 66

Query: 63  RLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 122
           RL+ MEKVKNKEAETHKAVESKKASIEA RE KK KVE KA  HR  NTVP KCFGIC D
Sbjct: 67  RLRGMEKVKNKEAETHKAVESKKASIEAKRELKKLKVEGKAKVHRCTNTVPKKCFGICND 126

[Close]

BLAST of Lcy11g001630 vs. ExPASy TrEMBL
Match: A0A2K1YDD2 (Remorin_C domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G140900 PE=3 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 3.9e-18
Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 11  NELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKV 70
           +E  IKAWED+EK K+ NKA+R L+  + W+   K + EA+  KIE +LE +R  + EK+
Sbjct: 13  HERNIKAWEDKEKAKSANKAQRMLSDIKTWEEKMKISHEAKTMKIEAELESIRQHKHEKI 72

Query: 71  KNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 123
           KN+EA+  KA+E KKA+I+A  + K  ++ EKA KHRS NT+P KCFGIC D
Sbjct: 73  KNEEAQIQKAMEQKKAAIDAQNQKKVLEITEKADKHRSNNTLPMKCFGICAD 124

[Close]

BLAST of Lcy11g001630 vs. ExPASy TrEMBL
Match: A0A6P6BAM8 (remorin-like OS=Durio zibethinus OX=66656 GN=LOC111316475 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.3e-17
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 1   MVAGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLE 60
           +V    + +K    IKAWE+ EK KA+NKA++KL+S EAW+++KK+A+EAE+KKIE  LE
Sbjct: 78  VVLARVATEKRNSLIKAWEESEKSKAENKAQKKLSSIEAWENSKKAAMEAELKKIEQKLE 137

Query: 61  KMRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
           K + + +EK+KNK A  HK  E KKA +EA R     K EE AAK+R+  T P K  G
Sbjct: 138 KQKAEYVEKMKNKVALIHKEAEEKKAIVEAKRGEDLLKAEEMAAKYRATGTTPKKILG 195

[Close]

BLAST of Lcy11g001630 vs. ExPASy TrEMBL
Match: A0A6P5TJD0 (remorin 4.1-like OS=Prunus avium OX=42229 GN=LOC110767766 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.3e-17
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 14  KIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNK 73
           ++K WE ++K K DNKA++ +A  E  K+  +  LEA  KKIE  +EK+R KE+EK+KNK
Sbjct: 16  RVKTWETKQKAKVDNKADKMIAINEEKKNASEIDLEALGKKIETKVEKLRHKELEKMKNK 75

Query: 74  EAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 123
           EA + K  E  K  IEA R H  QKVE+KA K R +N++PTKCFG+C D
Sbjct: 76  EAHSIKVTEDTKVKIEAKRTHGLQKVEKKAEKFRGSNSLPTKCFGVCVD 124

[Close]

BLAST of Lcy11g001630 vs. ExPASy TrEMBL
Match: A0A314Y9Y3 (Remorin_C domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_27756 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.5e-17
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 14  KIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNK 73
           ++K WE ++K K DNKA++ +A  E  K+  +  LEA  KKIE  +EK+R KE+EK+KNK
Sbjct: 16  RVKTWETKQKAKVDNKADKMIAINEEKKNASEIDLEALGKKIETKVEKLRHKEVEKMKNK 75

Query: 74  EAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 123
           EA + K  E  K  IEA R H  QKVE+KA K R +N++PTKCFG+C D
Sbjct: 76  EAHSIKVTEDTKVKIEAKRTHGLQKVEKKAEKFRGSNSLPTKCFGVCVD 124

[Close]

BLAST of Lcy11g001630 vs. NCBI nr
Match: KGN57373.1 (hypothetical protein Csa_010046 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 6.5e-36
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 3   AGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKM 62
           A +T  +K E+KI+ WEDREKIKADNKAER+LASTEAWK++KK+ALEAEVKKI+ DL K+
Sbjct: 7   ASATDRRKIEIKIQVWEDREKIKADNKAERRLASTEAWKNSKKAALEAEVKKIDADLVKL 66

Query: 63  RLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 122
           RL+ MEKVKNKEAETHKAVESKKASIEA RE KK KVE KA  HR  NTVP KCFGIC D
Sbjct: 67  RLRGMEKVKNKEAETHKAVESKKASIEAKRELKKLKVEGKAKVHRCTNTVPKKCFGICND 126

[Close]

BLAST of Lcy11g001630 vs. NCBI nr
Match: XP_004140777.2 (remorin [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 3.2e-27
Identity = 78/101 (77.23%), Postives = 89/101 (88.12%), Query Frame = 0


Query: 3   AGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKM 62
           A +T  +K E+KI+ WEDREKIKADNKAER+LASTEAWK++KK+ALEAEVKKI+ DL K+
Sbjct: 7   ASATDRRKIEIKIQVWEDREKIKADNKAERRLASTEAWKNSKKAALEAEVKKIDADLVKL 66

Query: 63  RLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKA 104
           RL+ MEKVKNKEAETHKAVESKKASIEA RE KK KVE KA
Sbjct: 67  RLRGMEKVKNKEAETHKAVESKKASIEAKRELKKLKVEGKA 107

[Close]

BLAST of Lcy11g001630 vs. NCBI nr
Match: XP_011030105.1 (PREDICTED: uncharacterized protein LOC105129652 isoform X1 [Populus euphratica])

HSP 1 Score: 102.4 bits (254), Expect = 2.7e-18
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 11  NELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKV 70
           NE  IKAWED+EK K+ NKA R L+  + W+   K + EA+  KIE +LE +R  + EK+
Sbjct: 165 NERNIKAWEDKEKAKSANKARRMLSDIKTWEEKMKISHEAQTMKIEAELESIRQHKHEKI 224

Query: 71  KNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 123
           KN+EA+  KA+E KKA+I+A  + K  ++ EKA KHRS NT+P KCFGIC D
Sbjct: 225 KNEEAQMQKAMEQKKAAIDAQNQKKVLEITEKADKHRSNNTLPMKCFGICTD 276

[Close]

BLAST of Lcy11g001630 vs. NCBI nr
Match: XP_024438026.1 (uncharacterized protein LOC7484383 isoform X1 [Populus trichocarpa])

HSP 1 Score: 100.9 bits (250), Expect = 8.0e-18
Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 11  NELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKV 70
           +E  IKAWED+EK K+ NKA+R L+  + W+   K + EA+  KIE +LE +R  + EK+
Sbjct: 165 HERNIKAWEDKEKAKSANKAQRMLSDIKTWEEKMKISHEAKTMKIEAELESIRQHKHEKI 224

Query: 71  KNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 123
           KN+EA+  KA+E KKA+I+A  + K  ++ EKA KHRS NT+P KCFGIC D
Sbjct: 225 KNEEAQIQKAMEQKKAAIDAQNQKKVLEITEKADKHRSNNTLPMKCFGICAD 276

[Close]

BLAST of Lcy11g001630 vs. NCBI nr
Match: PNT11038.2 (hypothetical protein POPTR_012G140900 [Populus trichocarpa])

HSP 1 Score: 100.9 bits (250), Expect = 8.0e-18
Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 11  NELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKV 70
           +E  IKAWED+EK K+ NKA+R L+  + W+   K + EA+  KIE +LE +R  + EK+
Sbjct: 13  HERNIKAWEDKEKAKSANKAQRMLSDIKTWEEKMKISHEAKTMKIEAELESIRQHKHEKI 72

Query: 71  KNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 123
           KN+EA+  KA+E KKA+I+A  + K  ++ EKA KHRS NT+P KCFGIC D
Sbjct: 73  KNEEAQIQKAMEQKKAAIDAQNQKKVLEITEKADKHRSNNTLPMKCFGICAD 124

[Close]

BLAST of Lcy11g001630 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.5e-19
Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 2   VAGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEK 61
           V      +K    IKAWE+ EK K +NKAE+KL+S  +W++ KK+A+EAE+KK+E  LEK
Sbjct: 84  VLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEK 143

Query: 62  MRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
            + + +E++KNK A+ HK  E K+A IEA R  +  K EE AAK+R+  T P K FG
Sbjct: 144 KKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFG 200

[Close]

BLAST of Lcy11g001630 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.5e-19
Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 2   VAGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEK 61
           V      +K    IKAWE+ EK K +NKAE+KL+S  +W++ KK+A+EAE+KK+E  LEK
Sbjct: 83  VLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEK 142

Query: 62  MRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
            + + +E++KNK A+ HK  E K+A IEA R  +  K EE AAK+R+  T P K FG
Sbjct: 143 KKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFG 199

[Close]

BLAST of Lcy11g001630 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 88.6 bits (218), Expect = 3.8e-18
Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 15  IKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKE 74
           IKAWE+ EK K +NKA++K++S  AW+++KK+++EAE+KKIE  L K +    E++KNK 
Sbjct: 70  IKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKI 129

Query: 75  AETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
           A+ HK  E K+A  EA R     K EE AAK+R+  T PTK FG
Sbjct: 130 AQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFG 173

[Close]

BLAST of Lcy11g001630 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 84.0 bits (206), Expect = 9.4e-17
Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 7   SDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKE 66
           S +K    ++AWE+ EK KA+NKAE+K+A   AW+++KK+A+EA++KKIE  LEK + + 
Sbjct: 99  SKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEY 158

Query: 67  MEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
            E++KNK A  HK  E ++A IEA R     K EE AAK+R+   VP    G
Sbjct: 159 AERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCG 210

[Close]

BLAST of Lcy11g001630 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 80.9 bits (198), Expect = 8.0e-16
Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 1   MVAGSTSDQKNELKIKAWEDREKIKADNKAERKLASTEAWKSTKKSALEAEVKKIEGDLE 60
           ++      +K    IKAWE+ EK KA+N+A++K++   AW+++KK+A+EA+++KIE  LE
Sbjct: 71  VILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLE 130

Query: 61  KMRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFG 119
           K + +  EK+KNK A  HK  E K+A +EA +  +  K EE  AK+R+   VP    G
Sbjct: 131 KKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCG 188

The following BLAST results are available for this feature:

BLAST of Lcy11g001630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA5	4.9e-18	47.86	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
P93788	7.0e-17	47.46	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9M2D8	1.3e-15	46.43	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	1.1e-14	40.68	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]

BLAST of Lcy11g001630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I9	3.1e-36	75.83	Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 P...	[more]
A0A2K1YDD2	3.9e-18	50.89	Remorin_C domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G...	[more]
A0A6P6BAM8	4.3e-17	50.00	remorin-like OS=Durio zibethinus OX=66656 GN=LOC111316475 PE=3 SV=1	[more]
A0A6P5TJD0	7.3e-17	51.38	remorin 4.1-like OS=Prunus avium OX=42229 GN=LOC110767766 PE=3 SV=1	[more]
A0A314Y9Y3	9.5e-17	51.38	Remorin_C domain-containing protein OS=Prunus yedoensis var. nudiflora OX=209455...	[more]

BLAST of Lcy11g001630 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57373.1	6.5e-36	75.83	hypothetical protein Csa_010046 [Cucumis sativus]	[more]
XP_004140777.2	3.2e-27	77.23	remorin [Cucumis sativus]	[more]
XP_011030105.1	2.7e-18	51.79	PREDICTED: uncharacterized protein LOC105129652 isoform X1 [Populus euphratica]	[more]
XP_024438026.1	8.0e-18	50.89	uncharacterized protein LOC7484383 isoform X1 [Populus trichocarpa]	[more]
PNT11038.2	8.0e-18	50.89	hypothetical protein POPTR_012G140900 [Populus trichocarpa]	[more]

BLAST of Lcy11g001630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	3.5e-19	47.86	Remorin family protein	[more]
AT5G23750.2	3.5e-19	47.86	Remorin family protein	[more]
AT3G48940.1	3.8e-18	50.00	Remorin family protein	[more]
AT3G61260.1	9.4e-17	46.43	Remorin family protein	[more]
AT2G45820.1	8.0e-16	40.68	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..108
None	No IPR available	PANTHER	PTHR31775:SF31	CARBOXY-TERMINAL REGION REMORIN	coord: 8..118
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 8..118
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 10..115 e-value: 4.8E-20 score: 71.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g001630.1	Lcy11g001630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress