Lcy11g001590 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g001590
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Actin-depolymerizing factor
Location	Chr11: 1629135 .. 1630826 (+)
RNA-Seq Expression	Lcy11g001590
Synteny	Lcy11g001590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTTGGGCAAAGTGTTGATAGGAAGGGAAGAATGCTGTTGTGTTTTAGCATGAAAGGTGGCATTGGAAATGTGGAAAACAAATCTCAACCTTAGTTTTGTCCCTCAAATTTCTCCTCTTCTCCTCTTTATTCTCATCTCTCTCCCCCAAAATAAGGATCTCTCCCTCTACCTTTTCATCTCTCACTTTTCTCTTTCTCTTCCCCCTTTCTTTCATTCTTCTCCTCCATTTTTCCCTACAGCCATCTCTCCCCCACACCCTTTCATACACATTCTCCGACAACATGGTACGTTTCCCTTTTCTTTTTCATAGTAGCGTAGCGTTATTTGTGAATGTCATGATGTTACTCTGTCAATTCTCTCATGTTTGTGATCATTACTTGTTGGAAAAAACTTGGCTACATACCCGTATGTAGGGAGATACCATCAAAATCTTGACAAGTAGGAGAGATATAAAAGTTTTCTCATTTTCTCCCTTCCTTTTTCTTAGTTGTCAAGATTTTAATGGAGTAAGATCCCTACATATCGATATGCAGCCAAATTTTGGTTTTTATTTGTTTAGACGAACGATGAAAGGTGAAAAAGGCTCCTGTTTCGTTGTGTGTGTGTGTGTGTTTTTACCTGTTTGGAATAACCTTCTAAATACTTTAAAATGGTTTTTCAAGCACCTTAGGTCCCGTTTGATAACCATTTCGTTTTTTGTTTTTGGTTTTTGAAAATTAAGCCTATAAACACTATTTTTACCCACAAGCTTCTTTGTTTTTTTATCTACATCATTTCCCATGTTTTAAAAAACCAAGCCAAATTTTGAAAACAAAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTGAAATTTGGCTAGGAATTCAGATTTCTTCTTAACAAAAATGAAAACCATTGTAAGAAGAACGAGAGAAAACAAGTACAATTTTCAAAAACCAAAAACAAAAAACGAAATGGTTATCAACGGGGCATTAGAAAGTCATTTCGAAATGGACTGATGCTTGTTGTGTTATGGGATGAATCAGGCGAACGCTGCATCTGGAATGGCTGTGAGGGATGAATGCAAGCTCAAATTTTTGGAATTGAAAGCGAAGAGGAACTATCGATTCATTATATTCAAGATCGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTGAAGAAACTTATGAGGATTTCACTGCCGCCATTCCTCCTAATGAGTGTCGCTATGCTGTCTTTGACTTTGACTTCATCACTGATGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTAACATTAACTTCTCATTTCTAACACAAATCTACACACATTCACATTTCATTTCAATCCAAACAAAACATCAATGTCTTCTTCATTGGCTCTTGGGGTTTTAAGGAGTGAGAGCATTTCAACATCCTTTGGTAAAATTTTGACTTCTCTATCAATTTTTCTAACATAAGTTAAACCTTAAACCTTCAAGAACACATGAACTGAGCTTGTCTGTCTGTCCAAATCTCTGTCTGTCTCTGTTTTGAAGGTCGCCCGACACATCGAAAGTGAGGAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTGCAAGCCACAGATCCTAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCTTTTTAA

mRNA sequence

TTATTTTGGGCAAAGTGTTGATAGGAAGGGAAGAATGCTGTTGTGTTTTAGCATGAAAGGTGGCATTGGAAATGTGGAAAACAAATCTCAACCTTAGTTTTGTCCCTCAAATTTCTCCTCTTCTCCTCTTTATTCTCATCTCTCTCCCCCAAAATAAGGATCTCTCCCTCTACCTTTTCATCTCTCACTTTTCTCTTTCTCTTCCCCCTTTCTTTCATTCTTCTCCTCCATTTTTCCCTACAGCCATCTCTCCCCCACACCCTTTCATACACATTCTCCGACAACATGGCGAACGCTGCATCTGGAATGGCTGTGAGGGATGAATGCAAGCTCAAATTTTTGGAATTGAAAGCGAAGAGGAACTATCGATTCATTATATTCAAGATCGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTGAAGAAACTTATGAGGATTTCACTGCCGCCATTCCTCCTAATGAGTGTCGCTATGCTGTCTTTGACTTTGACTTCATCACTGATGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTCGCCCGACACATCGAAAGTGAGGAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTGCAAGCCACAGATCCTAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCTTTTTAA

Coding sequence (CDS)

ATGGCGAACGCTGCATCTGGAATGGCTGTGAGGGATGAATGCAAGCTCAAATTTTTGGAATTGAAAGCGAAGAGGAACTATCGATTCATTATATTCAAGATCGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTGAAGAAACTTATGAGGATTTCACTGCCGCCATTCCTCCTAATGAGTGTCGCTATGCTGTCTTTGACTTTGACTTCATCACTGATGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTCGCCCGACACATCGAAAGTGAGGAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTGCAAGCCACAGATCCTAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCTTTTTAA

Protein sequence

MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPPNECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

Homology

[Close]

BLAST of Lcy11g001590 vs. ExPASy Swiss-Prot
Match: Q67ZM4 (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-65
Identity = 120/136 (88.24%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MANAASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P+ETY+DFTA++P 
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFITDENCQKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIIKARA 137
           ATDPSEMSFDIIK+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of Lcy11g001590 vs. ExPASy Swiss-Prot
Match: P30175 (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-61
Identity = 113/139 (81.29%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYEDFTAAI 60
           MAN++SGMAV DECKLKF+ELKAKRN+RFI+FKIE   Q+V VE+LG P E+Y+DFT  +
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PPNECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVE 120
           PPNECRYAVFDFDF+TDENCQKSKIFFI+WSPDTS+VR+KM+YAS+KDRFKRELDGIQVE
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAF 138
           LQATDPSEMS DIIKARAF
Sbjct: 121 LQATDPSEMSMDIIKARAF 139

[Close]

BLAST of Lcy11g001590 vs. ExPASy Swiss-Prot
Match: Q8LFH6 (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 1.8e-61
Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MANAASGMAV DECKLKFLELKAKRNYRFIIF+I+ Q+VVVEKLGSP+E Y+DFT  +PP
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAV+DFDF T EN QKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIIKARA 137
           ATDPSEMS DIIK+RA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]

BLAST of Lcy11g001590 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.7e-59
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYEDFTAAI 60
           MAN+ASGM V DECKLKFLELKAKRNYRFI+FKI+   Q+V+++KLG+PEETYEDFT +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PPNECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVE 120
           P +ECRYAV+D+DF T ENCQKSKIFFIAWSPDTS+VR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKAR 136
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of Lcy11g001590 vs. ExPASy Swiss-Prot
Match: Q7XSN9 (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58
Identity = 110/138 (79.71%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIE--NQEVVVEKLGSPEETYEDFTAAI 60
           MAN+ASGMAV DECKLKF ELK+KR++RFI FKI+   Q+VVV++LG P +TY+DFTA++
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PPNECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVE 120
           P +ECRYAVFDFDF+TDENCQKSKIFFI+WSPDTSKVR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARA 137
           LQATDPSEMS DI+KARA
Sbjct: 121 LQATDPSEMSMDIVKARA 138

[Close]

BLAST of Lcy11g001590 vs. ExPASy TrEMBL
Match: A0A6J1CI48 (uncharacterized protein LOC111011601 OS=Momordica charantia OX=3673 GN=LOC111011601 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68
Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MAN+ASGMAVRDECKLKF+ELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP
Sbjct: 340 MANSASGMAVRDECKLKFMELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 399

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           +ECRYAVFDFDF TDENCQKSKIFFIAWSPDTS+VRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 400 DECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRNKMVYASSKDRFKRELDGIQVELQ 459

Query: 121 ATDPSEMSFDIIKARAF 138
           ATDPSEMSFDIIKARAF
Sbjct: 460 ATDPSEMSFDIIKARAF 476

[Close]

BLAST of Lcy11g001590 vs. ExPASy TrEMBL
Match: A0A5A7SR44 (Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001180 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.5e-68
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPPN 61
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETY+DFTAAIP N
Sbjct: 277 ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPAN 336

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA
Sbjct: 337 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 396

Query: 122 TDPSEMSFDIIKARAF 138
           TDPSEMSFDIIKARAF
Sbjct: 397 TDPSEMSFDIIKARAF 412

[Close]

BLAST of Lcy11g001590 vs. ExPASy TrEMBL
Match: A0A1S3AY90 (LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=3656 GN=LOC103484078 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.5e-68
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPPN 61
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETY+DFTAAIP N
Sbjct: 251 ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPAN 310

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA
Sbjct: 311 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 370

Query: 122 TDPSEMSFDIIKARAF 138
           TDPSEMSFDIIKARAF
Sbjct: 371 TDPSEMSFDIIKARAF 386

[Close]

BLAST of Lcy11g001590 vs. ExPASy TrEMBL
Match: A0A0A0LBE8 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182120 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 7.8e-68
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MANAASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSPEETY+DF+AAIP 
Sbjct: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPA 60

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDF TDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIIKARAF 138
           ATDPSEMSFDIIKARAF
Sbjct: 121 ATDPSEMSFDIIKARAF 137

[Close]

BLAST of Lcy11g001590 vs. ExPASy TrEMBL
Match: A0A6J1G1V2 (uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC111449917 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 131/137 (95.62%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MANAASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSP ETY+DFTAAIPP
Sbjct: 350 MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 409

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDF TDENCQKSKIFFIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 410 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 469

Query: 121 ATDPSEMSFDIIKARAF 138
           ATD SEMSFDIIKARAF
Sbjct: 470 ATDASEMSFDIIKARAF 486

[Close]

BLAST of Lcy11g001590 vs. NCBI nr
Match: XP_022141136.1 (uncharacterized protein LOC111011601 [Momordica charantia])

HSP 1 Score: 268.5 bits (685), Expect = 3.2e-68
Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MAN+ASGMAVRDECKLKF+ELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP
Sbjct: 340 MANSASGMAVRDECKLKFMELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 399

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           +ECRYAVFDFDF TDENCQKSKIFFIAWSPDTS+VRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 400 DECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRNKMVYASSKDRFKRELDGIQVELQ 459

Query: 121 ATDPSEMSFDIIKARAF 138
           ATDPSEMSFDIIKARAF
Sbjct: 460 ATDPSEMSFDIIKARAF 476

[Close]

BLAST of Lcy11g001590 vs. NCBI nr
Match: XP_038886312.1 (uncharacterized protein LOC120076526 [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 5.5e-68
Identity = 133/137 (97.08%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MAN+ASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIP 
Sbjct: 309 MANSASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPA 368

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDF TDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 369 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 428

Query: 121 ATDPSEMSFDIIKARAF 138
           ATDPSEMSFDIIKARAF
Sbjct: 429 ATDPSEMSFDIIKARAF 445

[Close]

BLAST of Lcy11g001590 vs. NCBI nr
Match: KAA0033654.1 (zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 7.2e-68
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPPN 61
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETY+DFTAAIP N
Sbjct: 277 ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPAN 336

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA
Sbjct: 337 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 396

Query: 122 TDPSEMSFDIIKARAF 138
           TDPSEMSFDIIKARAF
Sbjct: 397 TDPSEMSFDIIKARAF 412

[Close]

BLAST of Lcy11g001590 vs. NCBI nr
Match: XP_008439227.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 7.2e-68
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPPN 61
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETY+DFTAAIP N
Sbjct: 251 ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPAN 310

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA
Sbjct: 311 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 370

Query: 122 TDPSEMSFDIIKARAF 138
           TDPSEMSFDIIKARAF
Sbjct: 371 TDPSEMSFDIIKARAF 386

[Close]

BLAST of Lcy11g001590 vs. NCBI nr
Match: XP_031738809.1 (actin-depolymerizing factor 7 [Cucumis sativus] >KGN57376.1 hypothetical protein Csa_009508 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MANAASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSPEETY+DF+AAIP 
Sbjct: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPA 60

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDF TDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIIKARAF 138
           ATDPSEMSFDIIKARAF
Sbjct: 121 ATDPSEMSFDIIKARAF 137

[Close]

BLAST of Lcy11g001590 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 248.8 bits (634), Expect = 2.5e-66
Identity = 120/136 (88.24%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MANAASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P+ETY+DFTA++P 
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFITDENCQKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIIKARA 137
           ATDPSEMSFDIIK+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of Lcy11g001590 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 )

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MANAASGMAV DECKLKFLELKAKRNYRFIIF+I+ Q+VVVEKLGSP+E Y+DFT  +PP
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAV+DFDF T EN QKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIIKARA 137
           ATDPSEMS DIIK+RA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]

BLAST of Lcy11g001590 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-60
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYEDFTAAI 60
           MAN+ASGM V DECKLKFLELKAKRNYRFI+FKI+   Q+V+++KLG+PEETYEDFT +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PPNECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVE 120
           P +ECRYAV+D+DF T ENCQKSKIFFIAWSPDTS+VR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKAR 136
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of Lcy11g001590 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 224.6 bits (571), Expect = 5.0e-59
Identity = 107/137 (78.10%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYEDFTAAI 60
           MAN+ASGM V DECK+KFLELKAKR YRFI+FKI+   Q+V +EKLG+PEETY+DFT++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PPNECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVE 120
           P +ECRYAV+DFDF T++NCQKSKIFFIAWSPDTS+VR+KM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIIKAR 136
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of Lcy11g001590 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 220.7 bits (561), Expect = 7.2e-58
Identity = 99/135 (73.33%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 60
           MANAASGMAV D+CKLKF+ELKAKR +R I++KIE+++V+VEKLG PE++Y+DF A++P 
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPA 60

Query: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120
           ++CRY ++DFDF+T ENCQKSKIFFIAWSPDT+KVR+KM+YASSKDRFKRELDGIQVELQ
Sbjct: 61  DDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIIKAR 136
           ATDP+EM  D+ K+R
Sbjct: 121 ATDPTEMGLDVFKSR 135

The following BLAST results are available for this feature:

BLAST of Lcy11g001590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67ZM4	3.5e-65	88.24	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1	[more]
P30175	1.4e-61	81.29	Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1	[more]
Q8LFH6	1.8e-61	85.29	Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=...	[more]
Q9LQ81	3.7e-59	81.02	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=...	[more]
Q7XSN9	1.1e-58	79.71	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 P...	[more]

BLAST of Lcy11g001590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CI48	1.6e-68	96.35	uncharacterized protein LOC111011601 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A5A7SR44	3.5e-68	97.79	Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3AY90	3.5e-68	97.79	LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=365...	[more]
A0A0A0LBE8	7.8e-68	96.35	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182120 PE=3 ...	[more]
A0A6J1G1V2	1.1e-66	95.62	uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]

BLAST of Lcy11g001590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141136.1	3.2e-68	96.35	uncharacterized protein LOC111011601 [Momordica charantia]	[more]
XP_038886312.1	5.5e-68	97.08	uncharacterized protein LOC120076526 [Benincasa hispida]	[more]
KAA0033654.1	7.2e-68	97.79	zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa]	[more]
XP_008439227.1	7.2e-68	97.79	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis me...	[more]
XP_031738809.1	1.6e-67	96.35	actin-depolymerizing factor 7 [Cucumis sativus] >KGN57376.1 hypothetical protein...	[more]

BLAST of Lcy11g001590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25590.1	2.5e-66	88.24	actin depolymerizing factor 7	[more]
AT5G52360.1	1.3e-62	85.29	actin depolymerizing factor 10	[more]
AT1G01750.1	2.7e-60	81.02	actin depolymerizing factor 11	[more]
AT4G00680.1	5.0e-59	78.10	actin depolymerizing factor 8	[more]
AT3G46000.1	7.2e-58	73.33	actin depolymerizing factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..137 e-value: 3.7E-56 score: 202.6
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..134 e-value: 3.9E-37 score: 126.8
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 5..137 score: 37.057297
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..136 e-value: 2.8E-52 score: 178.7
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 2..137
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..136 e-value: 4.68972E-63 score: 186.994
None	No IPR available	PANTHER	PTHR11913:SF92	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 2..137
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 3..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g001590.1	Lcy11g001590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003779	actin binding