Lcy11g001380 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g001380
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	rRNA 2'-O-methyltransferase fibrillarin
Location	Chr11: 1432745 .. 1440095 (-)
RNA-Seq Expression	Lcy11g001380
Synteny	Lcy11g001380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCGCCGCAGCCCTTATAAATTTAAAACCCTAAACAAGAGTCCTCACTTCGTCCCTCTGCTCTATTGTTCTAAAACCCTAGCAGAAACTATCCTCCGGCGCTCGCTCTTTCGGCGACTGAAATGAGACCTCCTCGAGGTACATACAGGAAACAAGCTGAGCTTGCACTCCTTGTGTTTTTGATTTTCTTGTTACTCGGCTTCCAAGAAGCTCTGTTGAGTTCGATGGAGGATAATGTTTTTAACGTAATGTATTGTTTGTATGTTTATTTCGTTAGTTGAATGAGCATGGCCGTTCCATAGTTACCACCTTCTGAATCTGCTTCTATGTAACATCTTTGATCGGTTGTTTTCTTGTTGGTTTCTGCTACTCTGTTTTCTTAGGGTCATTTAGCTTCTGTGTTATTTCTTTCTTTTACTCGAAATCTTTGTTTCGTAGCGTCTGTTTCAGTGTATATGGGTCATTAAATTGGAGTACGTTGGAAATGTGCAGGACGCGGTGGTGGTGGTGGATTCAGGGGTAGGGGTGATGGAGGAAGGGGTGGTAGAGGCAGAGGTGGTGGTGGAGGTAGAGGCGGCGGTGGAGGTAGAGGTATGCAAAGCCGCGGTGGTGGTCGCGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGAAGCAAAGTCGTCGTTGAACCCCACAGACACGAAGGTATTTTCATTGCCAAGGGTAAAGAAGATGCTCTTGTCACTAAGAACATGGTCTCTGGGGAATCTGTCTACAACGAGAAGAGAATATCCGTACAGGTGATTTGCGACTAACATCAATCTTTCCCTTTAAATGCTTATGTTAGTTTCCAACATACATTTATCGAGGTCGAGGAAAATCGTGGTCTTTTGGAAAACTTCGATAATGAGTTTTTGATGCATTATTATCCATGAGAAATTCTAGTTAGCATTAATATCTCCTAATAGTTTTGGGTGGTTCTGGCACTATAATTAATGCTCGGAAATAGTTTTGCTCCTTGAATCATTATGCATGGTCTATTGTTATGGCTTCAATGCTTGCAATCTTACAGATCTATTTTGGTTGTATTTGTAAGCTGCCTGCATAGCTAATTGTCTTATATACACTGTCCTTCCAGAATGAAGATGGAACAAAAGTTGAGTACAGAGTTTGGAACCCATTCAGATCTAAGTTGGCTGCAGCCGTTCTTGGTGGTGTTGATGACATATGGATTGTAAGAGCTTTTCACTCCCAATTTGATGTTCTAGTCTTCTATCTGTTTCCCTTTTCAGTTGTTTTATTTTATTTTTTCCGTTTTAATTTGTTATCATATGCACTGTAGAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACTGTATCACATGTCTCAGATGTTGTTGGCCCAGTAAGTAGTTATTTAGAGAGTATCTTTAGTAGCTTTCATTAAGTAAATAGCGTGCTTAATAATTGTTACTGCTTTGATTTGCAGACTGGTATAGTGTATGCTGTTGAATTCTCTCATAGAAGTGGTAGAGATTTAGTCAACATGGCCAAGAAGCGTACAAATGTTATACCCATCATTGAAGATGCCAGACACCCTGCCAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCCCAGCCTGATCAGGTCCACACTTTTCTTTTTCTAATTTCTCTGTATTATTCTTTTATATGTGAACATCACCAACTAACTGAAATTTGATGGCACAGTTTGATTTATATAATAAATAGAATCTAACCGTTGATTTTTATTTTTTCCCCTTATTTTGACCCTTTTAAGTTGGCATTCTATACATATTGTCTTTTCTTATCAAACCGTTTTAATCTCAGTTTTTTGTCTTTTGATGTAATGCGGCTACTTCATCTTTTTTTTTACTTAAGCGTTTTTCTCGTCAAATTATTTAGCATATGATGAATTACTCGGATTCCCCTTCAAGACTTCTTGAATGATGCAAGACCCGAGTTTCTGATGCTTGAAGAAAACTTTTCATTTGAATTTTCTTTATCTTTTTTCTGTCTAATTTTCACTTTTTGTTTGATACTAGCATACCCTTTTTTCAGTATTTTTATTGCTCTTGTTTTTCCCCTTTTCCCACTGTTTATCATCCTATTATATTTCATATAGACGTGTCAAATCAATCGAAGCTTATTTTTGTTTTACTTCTACCCCTTCTGGTTGGAGTTCTCAAATTGCATTTCTTCATTTTTCTATTTTTCTCGTGAAATATTATTGTTATCATATTTGCACCGTTCATTGCAATTTTATCAGTTCTTCGATTCAAACCACATAGTTTTCTTACCATGTGTAGTAATAAACTGAAATCTGAATTTCTGATTCCAGTACAAGAAATATCGATCACCTCCACCTCAACATTTTGTTGTTTACACTGCACTCACATCTCACTTTTGTGTTTTGGAGAAGTCCGTGAATTTTGCTGGTTACTTAAGATTGAAAGGCTAATGTTTATATAGCTCTATTTATCTTCGGATCTGGATGGTAATCATCTACCAATCTTCTGCTCAATCAACATATGGGGTCTTTCTATGCATAATCTTTTAGTTTCTCCCTAACAATCAATATATTATTTGCATGTTTTGTTCATATGTATTTATGATTATGATCTACTCTGCATCTCGTACAAACAAAGATAATGATCTACTCTTGATTGGTTCAGTTGTGGAAGTTCATATTCTTTCTAGTGTTTACTAAGAGTTGTGTTAAAGTAGAAAAAAGAAGTAAAAAAGAGAACAAGAATCTACCATCTTATTGAGATTACCTTGTTTGGATATGGGATATAGTAGGTGTGTCCCATAAATTTGTGAGCTGAAGCGACTATTTTATCACTCTATAAATTATTCTTATTTTGTTCGTCATCCTGCAGGTATATTTGCCATTGAACGTATAGTATATCTTACCACAGTTTTACCTTTTAGGCTCTAAGTCTTTGCTGAGCATGTGATGAATTACTCGGATTCCCCTTCAAGACATCTTGAATGATGCACAACCCGAGTTTCTGATGCGTCCAAGAATAATATCACATTTTGATTAAACCCTTCATCAGTTAGCATTTTTGCATTGCCAATACTTAAACCTATGAACTTTTTTATATCCCAACTTCTTACATTGACCTGACCTCTTTTAACTTCCCTCCAATGCAGGCAAGAATTTTGGCACTTAATGCATCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCAATCAAGGTGAGTACATGATTTTCATATTGTTAAATCAAATTACACCAGAATCCATGAAAAAGAAAATGATATACTTTATGTCAAACTTTTTGCAGGCCAACTGCATCGACTCAACTGTTCCTGCAGAGGCAGTGTTTGCAAGTGAGGTTAATAAGCTAAAAGCAGATAATTTCAAACCTACTGAGCAAGTGACTCTCGAACCATTCGAGCGGGACCATGCTTGTGTTGTTGGTATTTATCGGGCGCCGAAGAAACAGAAGCCAGCTGCTTAGACAGATCAATGAACCAGGGTTTGGATTATTTTACGGATGGTTTATAGATAAGCTGTAGTTTATCCATGTTTCTTATTGCTAGCTTGTACCGAGATCATTTTTATAACCAACATGTGAGTGATAGCTTTGTTTTCGATAATTTTGGTGATTAATGGAGGAGGACAGAAGTGCTGCCTTTTTTTCCTAATCTCTTTATTTTTTTTTTCTTCTGTTCGAAGTATAAGAATTGATCTCTTTGGTCACATCTGTTAAAATTAAAAATTTTCAAACCAAAACTTAATTTCATGATTGAGTTTTTTCTGCGCAAAATTGGAATTTTGGTTTTATTTCAATTGTGTTACGACTTCTTCTGAGAAACAAAAGGGTTATGCATTTCGCTATTTCGTTTATCTATTTGTCATTTTGGTCGTTGTTCAACTTAACATGGCTGAAGTAGTTGATAAGGGGGGAGTTGAAATGAAATTCCCATCGTTAATTCTTTTCCATGAATTATTCTCTACTTCTCTTTATTTTAAAACTGAAGTTAAATAATTTGTTTGGTAGAAACAAAGATTATGATAAGAAGTTTACAAAGAATTCGATTATCATAACTGCATTAATTTACGTGTTAAATATATTTTTTGTACAACCTCTAAAAAGAAGTATATGCTTTATTTTTGGGCAAGTATATATGCATATAAACAAACTCGATAATTAATCTAATCAATTATCACAACTACATTAATTTAGTAGTCCGAATGCCTTATAAGCCCCTTTGATTGACAACCGAGTTAAAATCTCATGTATGCCTCTTTGATACTAAAAAAAATCATCTAATTAGCAAAAAGTAATTCTATATTTGTAGGGTTATTAAAAAAAAACCTTTATTTCTAGGGATGTAGGAGCAAATTATATTGAAGGGAAAAAAGGACATTTATCAACCAATTTAGCAATTAAATTAATTATTTTGTCAGAAGTGGGATTTGATCCCACACCCTCTCATGAAGACCAGAAATTGAGTCTGGCACCTTAGACCACTCGGCCATCTTGACTTCTATTCAATTAGTGGAAAAACTCTATAATGAAAAGAAAAGAAAATTTAACCACCAGTTTAGAAATTAAATTAATTATAAATGAAGAAAAATTAAGAAATTTGTCAGAAGTGGGATTTGAACCCACGCCCTCTCACGAGGACCAGAACTTGAGTCTGGCGCCTTAGACCACTCGGCCATCCTGACTTTTGTTTGTTGAAAGATTAGTGTAGTTACTTGTTATATTAGTAATGTTATTTTCCCTATACTTATATTTAGGGAAGACTATTTCTACTCTCTATGTATGTGTGTATATATATTAAAAATGGTATCCTATCTAATTATTTCACTGCCAATATAAATTATTCAATTTTCTAAGTAAAAGAAATGATTTGTTTTTCTTGAAGTATTAATTTAGAAAATAACAAAAAATGAATTACTCTTTCCATGTTAAAGGCAATTCCTAAAAAAAAAATAATTTATCATCTCCCCACCAAATTTTGTTTAACTAAAAAAGAGAGAAATATTCTTATGGAAAATTAATTTTAAAAACAAAAATGAATTTCTTTTTCCATGTTAAAGACAATTCCTAAAACTCTGTCAACGGTCATTTTAACCAAAAAAGAAAATTTGGGTATTTACGTAATAATGTATTCACACAAAGGGTATTAATGTAAAAGCACTAGAAAAGAAAAGTTACCGTTGGAGGCGCGTTGGCTAGTATTTAAGTACAGTCTCGTTCATGATCTCCCAATTTTGCAACAAACTAAAACTCGAAGAAATCTCTAGAAGTTTTTCCAGTCGAAATTCAAGAAAGTCGAGAGGAAGATCGAGGAATTTTTCGTAAGAGGAAGTTAAATCATCGCTGCGTTCTCTTCTAACTGTGAGTTTCTCCCCGAATTCTGCTATTTTCAGGCTTTTGTAAATTCAAGGAAAGTTCGAATATCAATCTCTCTCGTATGCCGATCTTATTTTCTTTTGTTACTGTATGTTATCTGAGTTTAACAGCGAGAAATTGATGGAAAGTGATCGGTTTTGTTTGTTCGAAGTTGTTTCTGGGAATTTATTATCCTTTCTTTTTACCTGTGTCGTTGACGGATGATGAAATGAGCAACTGGAGAAATTTCATAATGTACATTGTATATCTAGAATTTCATAATGTAAATTAGGGCTTGGTCTGTAGGTACTTTTTTTCTTTCCGTTGGAAATTTGATTTTCTGTTTTTGTTACTGTATCTTCCCTGAGTTTAACAGAGAAACAGATGAACAGCAAGAAATTGATGAAAAGCGATAAACAAGATTATAGGGTTTTGTTTGGTCGAAGTTGTTACTGGAAATTTATTATTCTTTCTTTTTACCTATGTTGTCGACGGATGATGAAATGAAAAACTGGAGAAATTTCATGATGTTACATTGAATCTAGAATTTCATAACGTAAATTAGGGCTTGTTCTGTAGGTACTTTTTTCGTCCTGTTCAAGATTTTATTTTCTGTTTTTGAAATTGCTAAGGGAGATCTGAAATTAGGCAAGATTTTTGTTTTCAATAAAGAAAAGAGGAAACATTGGCCTAAGGAAATCTTCATGCATAAATGGATGATGTTAGTTCTGTAACCTTGAATTACGTACCAATTGACCTAATTACTGACTATTTACCAACATGTATATTCAATTTTTTTCTCTGTTACTTGAGTCCTTATGCTTTATTATAACGGGTCTTCGCCTTGATTTCATTGCAAAATTTCATACTCGGTTCCATTTTTTCCATTCGCAGGATAGAATATACATTTCTGCAGTAACAACAACATGGCAATGGCATTGCAAAATGGTGGTCTTATTCAGGATGAGAATCACAATGTTCACTATAATGGTTGAAGCTTAAGCTTTCTGTTTGAATAATTGTAGTTTGGTTCGTTCTTAATCCATTTGGCTGATCTTGTTTAACATTTGTTATTTGCATCACAGGACCCTCCATTGCAGGGAAGGCTAATGCAATGAATTCACAAAGAAAAAGTGGGCGAAAGCCCCTTGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACGAATCATCAAAATGGCAGAACACAAAGAATCTCACATTCATTGATGAAGAAACTGGTGCAGGGAAAAAGAAAAACATACTGAAGGGCTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTCCTTTCAGATATTTCAAACTCTGGAAAGCCAAACCTGCAGGCGGCCACTAAGAAGAAGCAGAACTTAAAGTTGAGCACTGTGAGGGAAGAATCGCTGCATCACAATGCTATCTGTGAGGAGCGCTTCCTGCACAATCATCAAGACTGCATTAAAGCAAAAAATTGCTCTATGGACAAGGATCAATTTTTGAGCATCGTTGGACTTGGTATAGTAGTAAAATTTTGACTTCTAACTCGAATGCCCATGTTTTATTCGATGTTTCTTTTGGTTTTTATTAATCTCTTTTGTTTCTTCTTGTCATTTAGATCTCCCCAAAGAGTTGATGATGTCCACTAGAAAGGTCAGTTTTCAAATCTTTTATACCCCCTTATCTCTATAATAATAGTCCTTCTGGAGCAAACATAACCAATTGAGTTTTTTCGGGTTTCAGCCTGATAGTCCATTGAAGCTCAATGAGATGATGGAATGGGCAGTTGTTGATCCATCTCCGAAGAAGTTGTGTCTGCTTGACTCATCGCCGCCTTGCAAATCCCCAAAATCACCTTCAATGTCCACCTTTTCTCTCTGGAAGGACAGCGACAGTATCAATTTCACATTGATAAAGACCCCGTAA

mRNA sequence

TGCCGCCGCAGCCCTTATAAATTTAAAACCCTAAACAAGAGTCCTCACTTCGTCCCTCTGCTCTATTGTTCTAAAACCCTAGCAGAAACTATCCTCCGGCGCTCGCTCTTTCGGCGACTGAAATGAGACCTCCTCGAGGACGCGGTGGTGGTGGTGGATTCAGGGGTAGGGGTGATGGAGGAAGGGGTGGTAGAGGCAGAGGTGGTGGTGGAGGTAGAGGCGGCGGTGGAGGTAGAGGTATGCAAAGCCGCGGTGGTGGTCGCGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGAAGCAAAGTCGTCGTTGAACCCCACAGACACGAAGGTATTTTCATTGCCAAGGGTAAAGAAGATGCTCTTGTCACTAAGAACATGGTCTCTGGGGAATCTGTCTACAACGAGAAGAGAATATCCGTACAGAATGAAGATGGAACAAAAGTTGAGTACAGAGTTTGGAACCCATTCAGATCTAAGTTGGCTGCAGCCGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACTGTATCACATGTCTCAGATGTTGTTGGCCCAACTGGTATAGTGTATGCTGTTGAATTCTCTCATAGAAGTGGTAGAGATTTAGTCAACATGGCCAAGAAGCGTACAAATGTTATACCCATCATTGAAGATGCCAGACACCCTGCCAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCCCAGCCTGATCAGGCAAGAATTTTGGCACTTAATGCATCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCAATCAAGGCCAACTGCATCGACTCAACTGTTCCTGCAGAGGCAGTGTTTGCAAGTGAGGTTAATAAGCTAAAAGCAGATAATTTCAAACCTACTGAGCAAGTGACTCTCGAACCATTCGAGCGGGACCATGCTTGTGTTTTAAATAATTTGTTTGGTAGAAACAAAGATTATGATAAGAAGTTTACAAAGAATTCGATTATCATAACTGCATTAATTTACAATATACATTTCTGCAGTAACAACAACATGGCAATGGCATTGCAAAATGGTGGTCTTATTCAGGATGAGAATCACAATGTTCACTATAATGGACCCTCCATTGCAGGGAAGGCTAATGCAATGAATTCACAAAGAAAAAGTGGGCGAAAGCCCCTTGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACGAATCATCAAAATGGCAGAACACAAAGAATCTCACATTCATTGATGAAGAAACTGGTGCAGGGAAAAAGAAAAACATACTGAAGGGCTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTCCTTTCAGATATTTCAAACTCTGGAAAGCCAAACCTGCAGGCGGCCACTAAGAAGAAGCAGAACTTAAAGTTGAGCACTGTGAGGGAAGAATCGCTGCATCACAATGCTATCTGTGAGGAGCGCTTCCTGCACAATCATCAAGACTGCATTAAAGCAAAAAATTGCTCTATGGACAAGGATCAATTTTTGAGCATCGTTGGACTTGATCTCCCCAAAGAGTTGATGATGTCCACTAGAAAGCCTGATAGTCCATTGAAGCTCAATGAGATGATGGAATGGGCAGTTGTTGATCCATCTCCGAAGAAGTTGTGTCTGCTTGACTCATCGCCGCCTTGCAAATCCCCAAAATCACCTTCAATGTCCACCTTTTCTCTCTGGAAGGACAGCGACAGTATCAATTTCACATTGATAAAGACCCCGTAA

Coding sequence (CDS)

ATGAGACCTCCTCGAGGACGCGGTGGTGGTGGTGGATTCAGGGGTAGGGGTGATGGAGGAAGGGGTGGTAGAGGCAGAGGTGGTGGTGGAGGTAGAGGCGGCGGTGGAGGTAGAGGTATGCAAAGCCGCGGTGGTGGTCGCGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGAAGCAAAGTCGTCGTTGAACCCCACAGACACGAAGGTATTTTCATTGCCAAGGGTAAAGAAGATGCTCTTGTCACTAAGAACATGGTCTCTGGGGAATCTGTCTACAACGAGAAGAGAATATCCGTACAGAATGAAGATGGAACAAAAGTTGAGTACAGAGTTTGGAACCCATTCAGATCTAAGTTGGCTGCAGCCGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACTGTATCACATGTCTCAGATGTTGTTGGCCCAACTGGTATAGTGTATGCTGTTGAATTCTCTCATAGAAGTGGTAGAGATTTAGTCAACATGGCCAAGAAGCGTACAAATGTTATACCCATCATTGAAGATGCCAGACACCCTGCCAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCCCAGCCTGATCAGGCAAGAATTTTGGCACTTAATGCATCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCAATCAAGGCCAACTGCATCGACTCAACTGTTCCTGCAGAGGCAGTGTTTGCAAGTGAGGTTAATAAGCTAAAAGCAGATAATTTCAAACCTACTGAGCAAGTGACTCTCGAACCATTCGAGCGGGACCATGCTTGTGTTTTAAATAATTTGTTTGGTAGAAACAAAGATTATGATAAGAAGTTTACAAAGAATTCGATTATCATAACTGCATTAATTTACAATATACATTTCTGCAGTAACAACAACATGGCAATGGCATTGCAAAATGGTGGTCTTATTCAGGATGAGAATCACAATGTTCACTATAATGGACCCTCCATTGCAGGGAAGGCTAATGCAATGAATTCACAAAGAAAAAGTGGGCGAAAGCCCCTTGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACGAATCATCAAAATGGCAGAACACAAAGAATCTCACATTCATTGATGAAGAAACTGGTGCAGGGAAAAAGAAAAACATACTGAAGGGCTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTCCTTTCAGATATTTCAAACTCTGGAAAGCCAAACCTGCAGGCGGCCACTAAGAAGAAGCAGAACTTAAAGTTGAGCACTGTGAGGGAAGAATCGCTGCATCACAATGCTATCTGTGAGGAGCGCTTCCTGCACAATCATCAAGACTGCATTAAAGCAAAAAATTGCTCTATGGACAAGGATCAATTTTTGAGCATCGTTGGACTTGATCTCCCCAAAGAGTTGATGATGTCCACTAGAAAGCCTGATAGTCCATTGAAGCTCAATGAGATGATGGAATGGGCAGTTGTTGATCCATCTCCGAAGAAGTTGTGTCTGCTTGACTCATCGCCGCCTTGCAAATCCCCAAAATCACCTTCAATGTCCACCTTTTCTCTCTGGAAGGACAGCGACAGTATCAATTTCACATTGATAAAGACCCCGTAA

Protein sequence

MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVLNNLFGRNKDYDKKFTKNSIIITALIYNIHFCSNNNMAMALQNGGLIQDENHNVHYNGPSIAGKANAMNSQRKSGRKPLGDLSNSRKPVLNESSKWQNTKNLTFIDEETGAGKKKNILKGSERVQKGTRKVLSDISNSGKPNLQAATKKKQNLKLSTVREESLHHNAICEERFLHNHQDCIKAKNCSMDKDQFLSIVGLDLPKELMMSTRKPDSPLKLNEMMEWAVVDPSPKKLCLLDSSPPCKSPKSPSMSTFSLWKDSDSINFTLIKTP

Homology

[Close]

BLAST of Lcy11g001380 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 428.7 bits (1101), Expect = 1.0e-118
Identity = 251/305 (82.30%), Postives = 264/305 (86.56%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGG-RGGRGRGG-GGGRGG---GGGRGMQSRGG-GRGGGRGRG 60
           MRPP    GGG   GRG GG  GGRG GG  GGRGG   GGGRG   RGG GRG G  RG
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRG 60

Query: 61  GGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQ 120
           G RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQ
Sbjct: 61  GARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ 120

Query: 121 NEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTG 180
           NEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G
Sbjct: 121 NEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEG 180

Query: 181 IVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240
            VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI
Sbjct: 181 CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240

Query: 241 LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERD 293
           LALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ + FKP EQVTLEPFERD
Sbjct: 241 LALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERD 300

[Close]

BLAST of Lcy11g001380 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.3e-118
Identity = 247/298 (82.89%), Postives = 259/298 (86.91%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRG-----MQSRGGGRGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR         RG GRG  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKV 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKV
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 240
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASF 240

Query: 241 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ + FKP EQVTLEPFERDHACV+
Sbjct: 241 FLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVV 294

[Close]

BLAST of Lcy11g001380 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 6.3e-105
Identity = 223/298 (74.83%), Postives = 247/298 (82.89%), Query Frame = 0


Query: 5   RGRGGGGGFRGRG--DGGRGGRGRGGG--------GGRGGGGGRGMQSRGGGRGGGRGRG 64
           RGRGGGG   GRG   GGRGG GRGGG        GGRGGGGGRG   RGGG  GG GRG
Sbjct: 41  RGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGGFGGRGGGGGRGGGGRGGGGRGGGGRG 100

Query: 65  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKV 124
           GG  GG KGG  V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+N +G K+
Sbjct: 101 GG-AGGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGEKI 160

Query: 125 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 184
           EYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAVEF
Sbjct: 161 EYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEF 220

Query: 185 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 244
           SHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +
Sbjct: 221 SHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQH 280

Query: 245 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           FLK GGHFVISIKA+CIDST   EAVFASEV K++AD  KP EQ+TLEP+ERDHA V+
Sbjct: 281 FLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEPYERDHAVVV 336

[Close]

BLAST of Lcy11g001380 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 7.0e-104
Identity = 221/298 (74.16%), Postives = 246/298 (82.55%), Query Frame = 0


Query: 5   RGRGGGGGFRGRG--DGGRGGRGRGGG--------GGRGGGGGRGMQSRGGGRGGGRGRG 64
           RGRGGGG   GRG   GGRGG GRGGG        GGRGGGGGRG   RGGG  GG GRG
Sbjct: 40  RGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 99

Query: 65  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKV 124
           GG  GG KGG  V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+  +G K+
Sbjct: 100 GG-AGGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGEKI 159

Query: 125 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 184
           EYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAVEF
Sbjct: 160 EYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEF 219

Query: 185 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 244
           SHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +
Sbjct: 220 SHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQH 279

Query: 245 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           FLK GGHFVISIKA+CIDST   EAVFA+EV K++AD  KP EQ+TLEP+ERDHA V+
Sbjct: 280 FLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEPYERDHAVVV 335

[Close]

BLAST of Lcy11g001380 vs. ExPASy Swiss-Prot
Match: P22509 (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2)

HSP 1 Score: 376.7 bits (966), Expect = 4.5e-103
Identity = 220/294 (74.83%), Postives = 247/294 (84.01%), Query Frame = 0


Query: 6   GRGGGGGF-RGRGDGGRGGRGRGGGG----GRGGGGGRGMQSRGGGRGGGRGRGGGRGG- 65
           GRGG GGF  GRG  G GGRGRGGGG    GRGGGGGRG    G   GGGRGRGGGRGG 
Sbjct: 27  GRGGRGGFGGGRGGFGGGGRGRGGGGGGFRGRGGGGGRG---GGFQSGGGRGRGGGRGGK 86

Query: 66  -GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRV 125
            G + G  V+VEPHRHEG+FI +GKEDALVTKN+V GESVY EKR+S+ +E   K+EYR 
Sbjct: 87  RGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSI-SEGDDKIEYRA 146

Query: 126 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 185
           WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRS
Sbjct: 147 WNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRS 206

Query: 186 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 245
           GRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ 
Sbjct: 207 GRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRN 266

Query: 246 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           GGHFVISIKANCIDST  AEAVFASEV K++ +N KP EQ+TLEP+ERDHA V+
Sbjct: 267 GGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVV 316

[Close]

BLAST of Lcy11g001380 vs. ExPASy TrEMBL
Match: A0A1S3AY25 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103484122 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 4.1e-147
Identity = 288/292 (98.63%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 292

[Close]

BLAST of Lcy11g001380 vs. ExPASy TrEMBL
Match: A0A6J1CHH3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charantia OX=3673 GN=LOC111011688 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 9.1e-147
Identity = 288/292 (98.63%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 292

[Close]

BLAST of Lcy11g001380 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 289/292 (98.97%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 291

[Close]

BLAST of Lcy11g001380 vs. ExPASy TrEMBL
Match: A0A6J1HX74 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111467690 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145
Identity = 286/292 (97.95%), Postives = 289/292 (98.97%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRG GGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGFGGGRGMASRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 292

[Close]

BLAST of Lcy11g001380 vs. ExPASy TrEMBL
Match: A0A6J1E4P7 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita moschata OX=3662 GN=LOC111430753 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145
Identity = 288/292 (98.63%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRI+VQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRIAVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 291

[Close]

BLAST of Lcy11g001380 vs. NCBI nr
Match: KAG6576706.1 (rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 896.3 bits (2315), Expect = 1.3e-256
Identity = 500/572 (87.41%), Postives = 518/572 (90.56%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGR GGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGR-GGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVLNNLFGRNK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+    G   
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV----GIIT 300

Query: 301 DYDKKFTKNSIIITALIYNIHFCS-NNNMAMALQNGGLIQDENHNVHYNGPSIAGKANAM 360
           DY  K+  N I+     YN   CS  N+MAM LQ+GGL QDEN NV YNG ++AGKANAM
Sbjct: 301 DYSPKWIFNWILCYLSPYNWSICSIINSMAMTLQSGGLTQDENLNVRYNGSAVAGKANAM 360

Query: 361 NSQRK---SGRKPLGDLSNSRKPVLNESSKWQNTKNLTFIDEETGAGKKKNILKGSERVQ 420
           NSQRK   SGRKPLGDLSNSRKP LN+SSK QNTKNLTFIDEETGAGKKKNILKGSE+VQ
Sbjct: 361 NSQRKSGLSGRKPLGDLSNSRKPDLNQSSKLQNTKNLTFIDEETGAGKKKNILKGSEKVQ 420

Query: 421 KGTRKVLSDISNSGKPNLQAATKKKQNLKLSTVREESLHHNAICEERFLHNHQDCIKAKN 480
           KGTRKVLSDISNSG PNL  A+KKKQ LKLSTVRE+SLHHNAICEERFLHNHQDCIK++N
Sbjct: 421 KGTRKVLSDISNSGMPNLPEASKKKQKLKLSTVREKSLHHNAICEERFLHNHQDCIKSQN 480

Query: 481 CSMDKDQFLSIVGLDLPKELMMST-RKPDSPLKLNEMMEWAVVDPSPKKLCLL-----DS 540
            +MDKDQFLSIVGLD PKELM ST RKPDSPLKL EM E AVVD SPKKLCL      DS
Sbjct: 481 SAMDKDQFLSIVGLDFPKELMTSTRRKPDSPLKLMEMAELAVVDRSPKKLCLFGRGWPDS 540

Query: 541 SPPCKSPKSPSMSTFSLWKDSDSINFTLIKTP 563
           SPPCKSPKSPS+ TFSLWKD+D+INFTLIKTP
Sbjct: 541 SPPCKSPKSPSVDTFSLWKDTDNINFTLIKTP 566

[Close]

BLAST of Lcy11g001380 vs. NCBI nr
Match: XP_008439295.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo])

HSP 1 Score: 531.6 bits (1368), Expect = 8.4e-147
Identity = 288/292 (98.63%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 292

[Close]

BLAST of Lcy11g001380 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.8 bits (1366), Expect = 1.4e-146
Identity = 289/292 (98.97%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 292

[Close]

BLAST of Lcy11g001380 vs. NCBI nr
Match: XP_022141240.1 (mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia])

HSP 1 Score: 530.4 bits (1365), Expect = 1.9e-146
Identity = 288/292 (98.63%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 292

[Close]

BLAST of Lcy11g001380 vs. NCBI nr
Match: XP_022984980.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima] >KAG7014755.1 Mediator of RNA polymerase II transcription subunit 36a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 526.6 bits (1355), Expect = 2.7e-145
Identity = 289/292 (98.97%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           HFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACV+
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 291

[Close]

BLAST of Lcy11g001380 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 428.7 bits (1101), Expect = 7.2e-120
Identity = 251/305 (82.30%), Postives = 264/305 (86.56%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGG-RGGRGRGG-GGGRGG---GGGRGMQSRGG-GRGGGRGRG 60
           MRPP    GGG   GRG GG  GGRG GG  GGRGG   GGGRG   RGG GRG G  RG
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRG 60

Query: 61  GGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQ 120
           G RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQ
Sbjct: 61  GARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ 120

Query: 121 NEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTG 180
           NEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G
Sbjct: 121 NEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEG 180

Query: 181 IVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240
            VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI
Sbjct: 181 CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240

Query: 241 LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERD 293
           LALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ + FKP EQVTLEPFERD
Sbjct: 241 LALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERD 300

[Close]

BLAST of Lcy11g001380 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 428.3 bits (1100), Expect = 9.4e-120
Identity = 247/298 (82.89%), Postives = 259/298 (86.91%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRG-----MQSRGGGRGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR         RG GRG  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKV 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKV
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 240
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASF 240

Query: 241 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVL 293
           FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ + FKP EQVTLEPFERDHACV+
Sbjct: 241 FLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVV 294

[Close]

BLAST of Lcy11g001380 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 334.0 bits (855), Expect = 2.4e-91
Identity = 195/298 (65.44%), Postives = 224/298 (75.17%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGG--GRGRGGGR- 60
           M+PP+        RGRG G RGGRG          GG G   RG GRGG  GRGRG GR 
Sbjct: 1   MKPPQ--------RGRGGGVRGGRGL-------ARGGEGSAVRGSGRGGESGRGRGPGRV 60

Query: 61  ----GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK 120
                GG+KGGSKV+V PHRH G+F+AK K DALVTKN+V GE +YNEKRI VQNED + 
Sbjct: 61  KSESDGGIKGGSKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRST 120

Query: 121 VEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVE 180
           VEYRVWNP RSKLA A+  GVD+IWIKPG +VLYLGA+SG TVSHVSD+VGP G VYAVE
Sbjct: 121 VEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVE 180

Query: 181 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS 240
            S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LNAS
Sbjct: 181 HSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNAS 240

Query: 241 YFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACV 292
           YFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ +  +PTE + L+  E  HACV
Sbjct: 241 YFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACV 283

[Close]

BLAST of Lcy11g001380 vs. TAIR 10
Match: AT5G52470.2 (fibrillarin 1 )

HSP 1 Score: 315.5 bits (807), Expect = 8.8e-86
Identity = 190/230 (82.61%), Postives = 198/230 (86.09%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRG-----MQSRGGGRGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR         RG GRG  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKV 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKV
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 225
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226

The following BLAST results are available for this feature:

BLAST of Lcy11g001380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AH9	1.0e-118	82.30	rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q9FEF8	1.3e-118	82.89	rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q8I1F4	6.3e-105	74.83	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3...	[more]
Q9W1V3	7.0e-104	74.16	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi...	[more]
P22509	4.5e-103	74.83	rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=...	[more]

BLAST of Lcy11g001380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AY25	4.1e-147	98.63	mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=...	[more]
A0A6J1CHH3	9.1e-147	98.63	mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charan...	[more]
A0A6J1JA27	1.3e-145	98.97	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A6J1HX74	2.9e-145	97.95	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A6J1E4P7	2.9e-145	98.63	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita mo...	[more]

BLAST of Lcy11g001380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576706.1	1.3e-256	87.41	rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp...	[more]
XP_008439295.1	8.4e-147	98.63	PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis...	[more]
XP_023552409.1	1.4e-146	98.97	mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub...	[more]
XP_022141240.1	1.9e-146	98.63	mediator of RNA polymerase II transcription subunit 36a-like [Momordica charanti...	[more]
XP_022984980.1	2.7e-145	98.97	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxi...	[more]

BLAST of Lcy11g001380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25630.1	7.2e-120	82.30	fibrillarin 2	[more]
AT5G52470.1	9.4e-120	82.89	fibrillarin 1	[more]
AT5G52490.1	2.4e-91	65.44	Fibrillarin family protein	[more]
AT5G52470.2	8.8e-86	82.61	fibrillarin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	PRINTS	PR00052	FIBRILLARIN	coord: 274..295 score: 50.65 coord: 192..221 score: 70.24 coord: 222..251 score: 67.62 coord: 142..163 score: 79.22 coord: 87..106 score: 64.29 coord: 167..184 score: 72.22 coord: 115..134 score: 75.71
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 69..294 e-value: 3.2E-168 score: 574.8
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 69..293 e-value: 1.9E-107 score: 357.6
IPR000692	Fibrillarin	HAMAP	MF_00351	RNA_methyltransf_FlpA	coord: 83..296 score: 36.6689
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 120..295 e-value: 2.1E-86 score: 290.0
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 64..119 e-value: 3.7E-29 score: 102.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	PANTHER	PTHR10335:SF22	FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 4..293
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 4..293
IPR020813	Fibrillarin, conserved site	PROSITE	PS00566	FIBRILLARIN	coord: 167..181
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 67..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g001380.1	Lcy11g001380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000494	box C/D RNA 3'-end processing
biological_process	GO:1990258	histone glutamine methylation
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0051225	spindle assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0031122	cytoplasmic microtubule organization
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000922	spindle pole
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0000930	gamma-tubulin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0000923	equatorial microtubule organizing center
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031428	box C/D RNP complex
molecular_function	GO:0043015	gamma-tubulin binding
molecular_function	GO:1990259	histone-glutamine methyltransferase activity
molecular_function	GO:0051011	microtubule minus-end binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008649	rRNA methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity