Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATAATGGTGTCTTTTTCTCTGCGTGCTGTGGCTTTTTGCTTCTGTTTGTTGATTGCTTTGGTCGGAGCCGACAATGTAGAAGACGAGAAGCGTTTGTTTCATCGGCCTCTTGGTTTTTTTAAGGGTAAAGGGTTTCGTGGAGGCGGTCTCGGCGGCGGTGGAGGTTTTGGTGGCGGTGCCGGTGGAGGTTTTGGCGGCGGAGCTGGCGGTGGTTACGGTGGTGGGGCTGGCGGTGGTTTCGGCGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTCGGTGGAGGAGGTGGGTTGGGTGGCGGCGGAGGGCTTGGAGGCGGCGGTGGCTTGGGTGGTGGTGGAGGCTTAGGGCATGGTATTTATAAAAGGGGTTTTAAACATGGAGGACTTGGTGGCGGCGGTGGATTGGGTGGTGGCGGAGGGCTCGGCGGAGGTGGTGGTTTGGGCGGTGGAGGAGGCTTAGGGCATGGTATTTACAAGAGAGGTTTTAAGCATGGAAGATTTGGTGCTGGTGGCGGTGGAGGTCTAGGTGGTGGCGGAGGTCTTGGTGGAGGTGGAGGTCTAGGTGGCGGCGGAGGTCTTGGTGGTGGTGGAGGAGGTGGTCTTGGCGGCGGTGGAGGCCTTGGTGGTGGTGGAGGACTTGGAGGTGGTGGTGGTCTGGGTGGAGGAGCTGGTGGCGGTCTTGGTGGAGGAGCTGGCGGTGGGTATGGAGGAGGTGCCGGGGGAGGCTTCGGTGGCGGTGGTGGTGCAGGTGGTGGCGGAGGATTCGGAGGAGGTGCTGGGGGTGGATTTGGTGGCGGAGCAGGAGGAGGAGGAGGCATTGGTGGAGGTGGCGGCGGAGGGTTTGGTGGAGGCGGAGGCGGAGGCTTTGGTGGTGGTGCCGGCTACGGCGGTGGAGCGGGAATCGGAGGCGGCGGCGGCCACCACTAAATGCAATGTGTTCAAATATCTATTTCTTATTTAAATCGTGAAATTATTATGTCTTGCTATCCACCTACGTACTCTTTGTAATGGTTTCTATGTGGGAGAGGTGATTTTTAAATTATGTAATTTGAAATTTAATTTAAAAAATCAAAATGGTGGTCACCGGTCAGAAACTTACGTCAATTCCTGATCGATACGGTGCGTTTTGCGTGAGGAATCTTGATCGAGTCTTCTTCATGCATGCAGAGTACGACGCTAATTCTGTAAAGCAGTGTTATTAATTATTATTACATAATATTTTCATTCTCTTATCCTACGTCATTGATTAATTCAAATAATTATGTGTTTTCTTTTATTCTTTTTATTGTCCTTCTTACTCGTTTGGTATTTGAAAGTAGATATTAATATTTGTAATCTGATTTTTTTTTTAGTTCTTGTAATTTGAAATTAGATATTGATATAAATGAATTATAAGAAGTAATTTAA
mRNA sequence
CAATAATGGTGTCTTTTTCTCTGCGTGCTGTGGCTTTTTGCTTCTGTTTGTTGATTGCTTTGGTCGGAGCCGACAATGTAGAAGACGAGAAGCGTTTGTTTCATCGGCCTCTTGGTTTTTTTAAGGGTAAAGGGTTTCGTGGAGGCGGTCTCGGCGGCGGTGGAGGTTTTGGTGGCGGTGCCGGTGGAGGTTTTGGCGGCGGAGCTGGCGGTGGTTACGGTGGTGGGGCTGGCGGTGGTTTCGGCGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTCGGTGGAGGAGGTGGGTTGGGTGGCGGCGGAGGGCTTGGAGGCGGCGGTGGCTTGGGTGGTGGTGGAGGCTTAGGGCATGGTATTTATAAAAGGGGTTTTAAACATGGAGGACTTGGTGGCGGCGGTGGATTGGGTGGTGGCGGAGGGCTCGGCGGAGGTGGTGGTTTGGGCGGTGGAGGAGGCTTAGGGCATGGTATTTACAAGAGAGGTTTTAAGCATGGAAGATTTGGTGCTGGTGGCGGTGGAGGTCTAGGTGGTGGCGGAGGTCTTGGTGGAGGTGGAGGTCTAGGTGGCGGCGGAGGTCTTGGTGGTGGTGGAGGAGGTGGTCTTGGCGGCGGTGGAGGCCTTGGTGGTGGTGGAGGACTTGGAGGTGGTGGTGGTCTGGGTGGAGGAGCTGGTGGCGGTCTTGGTGGAGGAGCTGGCGGTGGGTATGGAGGAGGTGCCGGGGGAGGCTTCGGTGGCGGTGGTGGTGCAGGTGGTGGCGGAGGATTCGGAGGAGGTGCTGGGGGTGGATTTGGTGGCGGAGCAGGAGGAGGAGGAGGCATTGGTGGAGGTGGCGGCGGAGGGTTTGGTGGAGGCGGAGGCGGAGGCTTTGGTGGTGGTGCCGGCTACGGCGGTGGAGCGGGAATCGGAGGCGGCGGCGGCCACCACTAAATGCAATGTGTTCAAATATCTATTTCTTATTTAAATCGTGAAATTATTATGTCTTGCTATCCACCTACGTACTCTTTGTAATGGTTTCTATGTGGGAGAGGTGATTTTTAAATTATGTAATTTGAAATTTAATTTAAAAAATCAAAATGGTGGTCACCGGTCAGAAACTTACGTCAATTCCTGATCGATACGGTGCGTTTTGCGTGAGGAATCTTGATCGAGTCTTCTTCATGCATGCAGAGTACGACGCTAATTCTGTAAAGCAGTGTTATTAATTATTATTACATAATATTTTCATTCTCTTATCCTACGTCATTGATTAATTCAAATAATTATGTGTTTTCTTTTATTCTTTTTATTGTCCTTCTTACTCGTTTGGTATTTGAAAGTAGATATTAATATTTGTAATCTGATTTTTTTTTTAGTTCTTGTAATTTGAAATTAGATATTGATATAAATGAATTATAAGAAGTAATTTAA
Coding sequence (CDS)
ATGGTGTCTTTTTCTCTGCGTGCTGTGGCTTTTTGCTTCTGTTTGTTGATTGCTTTGGTCGGAGCCGACAATGTAGAAGACGAGAAGCGTTTGTTTCATCGGCCTCTTGGTTTTTTTAAGGGTAAAGGGTTTCGTGGAGGCGGTCTCGGCGGCGGTGGAGGTTTTGGTGGCGGTGCCGGTGGAGGTTTTGGCGGCGGAGCTGGCGGTGGTTACGGTGGTGGGGCTGGCGGTGGTTTCGGCGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTCGGTGGAGGAGGTGGGTTGGGTGGCGGCGGAGGGCTTGGAGGCGGCGGTGGCTTGGGTGGTGGTGGAGGCTTAGGGCATGGTATTTATAAAAGGGGTTTTAAACATGGAGGACTTGGTGGCGGCGGTGGATTGGGTGGTGGCGGAGGGCTCGGCGGAGGTGGTGGTTTGGGCGGTGGAGGAGGCTTAGGGCATGGTATTTACAAGAGAGGTTTTAAGCATGGAAGATTTGGTGCTGGTGGCGGTGGAGGTCTAGGTGGTGGCGGAGGTCTTGGTGGAGGTGGAGGTCTAGGTGGCGGCGGAGGTCTTGGTGGTGGTGGAGGAGGTGGTCTTGGCGGCGGTGGAGGCCTTGGTGGTGGTGGAGGACTTGGAGGTGGTGGTGGTCTGGGTGGAGGAGCTGGTGGCGGTCTTGGTGGAGGAGCTGGCGGTGGGTATGGAGGAGGTGCCGGGGGAGGCTTCGGTGGCGGTGGTGGTGCAGGTGGTGGCGGAGGATTCGGAGGAGGTGCTGGGGGTGGATTTGGTGGCGGAGCAGGAGGAGGAGGAGGCATTGGTGGAGGTGGCGGCGGAGGGTTTGGTGGAGGCGGAGGCGGAGGCTTTGGTGGTGGTGCCGGCTACGGCGGTGGAGCGGGAATCGGAGGCGGCGGCGGCCACCACTAA
Protein sequence
MVSFSLRAVAFCFCLLIALVGADNVEDEKRLFHRPLGFFKGKGFRGGGLGGGGGFGGGAGGGFGGGAGGGYGGGAGGGFGGGAGGGFGGGGGVGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGRFGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGGGLGGGGGLGGGGGLGGGGGLGGGAGGGLGGGAGGGYGGGAGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGGGGFGGGGGGGFGGGAGYGGGAGIGGGGGHH
Homology
BLAST of Lcy10g014870 vs. ExPASy TrEMBL
Match:
A0A6J1E8R1 (glycine-rich cell wall structural protein-like OS=Cucurbita moschata OX=3662 GN=LOC111431824 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 9.7e-42
Identity = 269/318 (84.59%), Postives = 278/318 (87.42%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLIALVGADN-VEDEKRLFHRPLGFFKGKGFRGG---GLGGGGGFG 60
M SFSLR+VAF C+ IALVGADN VED+KRLFHRPLGF KG+GFRGG G GGGGGFG
Sbjct: 14 MASFSLRSVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRGFRGGGGFGGGGGGGFG 73
Query: 61 GGAGGGFGGGAGGGYGGGAGGGFGGGAGGGFGGGGGVGGGGGLGGGGGLGGGGGLGGGGG 120
GG GGGFGGGAGGG+GGGAGGG G G GGG GGGGG+GGGGGLGGGGGLGGGGGLGGGGG
Sbjct: 74 GGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGG 133
Query: 121 LGHGIYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGRFGAGGGGG 180
LGHGIYKRGFK GGLGGGGGLGGGGGLGGGGGLGGGGG+GHGIYKRGFK G G GGGGG
Sbjct: 134 LGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGG--GLGGGGG 193
Query: 181 LGGGGGLGGGGGLGGGGGLGGGGGGGLGGGGGLGG--GGGLGG--GGGLGGGAGGGLGGG 240
+GGGGGLGGGGGLGGGGGL GGGGGLGGGGGLGG G GLGG GGGLGGGAGGGLGGG
Sbjct: 194 IGGGGGLGGGGGLGGGGGL--GGGGGLGGGGGLGGGVGSGLGGGAGGGLGGGAGGGLGGG 253
Query: 241 AGGGYGGGAGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGGGGFGGGGGGGFG 300
AGGG GGGAGGG GGG G G GGG G GAGGGFGGGAG G GIGGGGGGG G GGGGG G
Sbjct: 254 AGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGVGIGGGGGGGGGFGGGGGIG 313
Query: 301 GGAGYGGGAGIGGGGGHH 311
GGAG+GGGAG GGGGGHH
Sbjct: 314 GGAGFGGGAGFGGGGGHH 327
BLAST of Lcy10g014870 vs. ExPASy TrEMBL
Match:
A0A6J1ELK4 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111434394 PE=4 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 4.2e-37
Identity = 196/310 (63.23%), Postives = 204/310 (65.81%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLIALVGADNVEDEKRLFHRPLGFFKGKGFRGGGLGGGGGFGGGAG 60
M SFSLR AFCFCLLIALVGA+NVED+KR FHRPLG+FKGKGF GGGLGGGGGFGGG G
Sbjct: 1 MASFSLRFAAFCFCLLIALVGANNVEDDKRFFHRPLGYFKGKGFHGGGLGGGGGFGGGGG 60
Query: 61 GGFGGGAGGGYGGGAGGGFGGGAGGGFGGGGGVGGGGGLGGGGGLGGGGGLGGGGGLGHG 120
GGF GGG GGGGGLGGGGG GHG
Sbjct: 61 GGF--------------------------------------GGGYGGGGGLGGGGGFGHG 120
Query: 121 IYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGRFGAGGGGGLGGG 180
I+K+GF+HGGL GGGGLGGGGGLGGGGGLGGGGG+GHGIYKRGFKH RF
Sbjct: 121 IHKKGFRHGGLSGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKHRRF----------- 180
Query: 181 GGLGGGGGLGGGGGLGGGGGGGLGGGGGLGGGGGLGGGGGLGGGAGGGLGGGAGGGYGGG 240
GGGGGGLGGGGG GGGGGLGGGGGLGGG GGGLGGG GGGYGGG
Sbjct: 181 ----------------GGGGGGLGGGGGYGGGGGLGGGGGLGGGGGGGLGGGVGGGYGGG 219
Query: 241 AGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGGGGFGGGGGGGFGGGAGYGGG 300
AGGGF GGGFGGGAGGGGG+ GGGGGFGGG GYGGG
Sbjct: 241 AGGGF----------------GGGFGGGAGGGGGL----------GGGGGFGGGGGYGGG 219
Query: 301 AGIGGGGGHH 311
AG GGGGGHH
Sbjct: 301 AGFGGGGGHH 219
BLAST of Lcy10g014870 vs. ExPASy TrEMBL
Match:
A0A0A0L443 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131980 PE=4 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 1.6e-36
Identity = 253/312 (81.09%), Postives = 260/312 (83.33%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLIALVGAD-NVEDEKRLFHRPLGFFKG-KGFRGGGL----GGGGG 60
M FSLRAV FCFC+LIALV AD NVED K LFHRPLGF+KG K FRGGGL GGGGG
Sbjct: 1 MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60
Query: 61 FGGGAGGGFGGGAGGGYGGGAGGGFGGGAGGGFGGGGGVGGGGGLGGGGGLGGGGGLGGG 120
FGGGAGGG G G GGG GGG G G G G GGG GGGGG+GGGGGLGGGGGLGGGGGLGGG
Sbjct: 61 FGGGAGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120
Query: 121 GGLGHGIYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGRFGAGGG 180
GGLGHGIYKRG+K GGLGGGGGLGGGGGLGGGGGLGHGIYKRGFK G G GGG
Sbjct: 121 GGLGHGIYKRGYKR------GGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKRG--GLGGG 180
Query: 181 GGLGGGGGLGGGGGLGGGGGLGG----GGGGGLGGGGGL--GGGGGLGGGGGLGGGAGGG 240
GGLGGGGGLGGGGGLGGGGGLGG GGGGGLGGGGGL GGGGG GGGGGLGGG+GGG
Sbjct: 181 GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGGGGGLGGGSGGG 240
Query: 241 LGGGAGGGYGGGAGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGGGGFGGGGG 300
LGGG GGGYGGGAGGGFGGGGGAGGGGGFGG GGGAGGGGGIGGG GGG+ GGG
Sbjct: 241 LGGGVGGGYGGGAGGGFGGGGGAGGGGGFGG------GGGAGGGGGIGGGAGGGY--GGG 296
BLAST of Lcy10g014870 vs. ExPASy TrEMBL
Match:
A0A6J1D0H4 (glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111016147 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 2.3e-35
Identity = 250/327 (76.45%), Postives = 256/327 (78.29%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLI-------ALVGADN-VEDEKRLFHRPLGFFKGKGFRGGGLGGG 60
M FSLRAVAF FC+L+ L GADN VED+K LFHRPLG FKGKGFRGGG+GG
Sbjct: 1 MAHFSLRAVAFPFCVLLIATAAAAGLAGADNVVEDDKHLFHRPLGLFKGKGFRGGGIGG- 60
Query: 61 GGFGGGAGGGFGGGAGGGYGGGAGGGFGGGAGGGFGGGGGVGGGGGLGGGGGLGGGGGLG 120
G G GGG GGGAGGGFGGG GGG GGGGG+GGGGGLGGGGGLGGGGGLG
Sbjct: 61 -----------GIGGGGGLGGGAGGGFGGGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLG 120
Query: 121 GGGGLGHGIYKRGFKH---------GGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRG 180
GGGGLGHGIYKRGFKH GG+GGGGGLGGGGGLGGGGGLGGGGGLGH IYKRG
Sbjct: 121 GGGGLGHGIYKRGFKHGRLGGGGLGGGIGGGGGLGGGGGLGGGGGLGGGGGLGHDIYKRG 180
Query: 181 FKHGRFGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGGGLGGGGGLGGGGGLGGGGGLGG 240
FKHGRF GGGGGLGGGGGLGGGGGL GGG GLGGGGGLGG G GGGLGG
Sbjct: 181 FKHGRF--------GGGGGLGGGGGLGGGGGL--GGGVGLGGGGGLGG----GSGGGLGG 240
Query: 241 GAGGGLGGGAGGGYGGGAGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGGGGF 300
GAGGGLGGGAGGGYGGGAGGGFGGGGGAGGGGGFGGG GG GGGAGGG G GGGGGGGF
Sbjct: 241 GAGGGLGGGAGGGYGGGAGGGFGGGGGAGGGGGFGGGIGG--GGGAGGGFGAGGGGGGGF 292
Query: 301 GGGGGGGFGGGAGYGGGAGIGGGGGHH 311
GGGGGFGGGAG G GGGGGHH
Sbjct: 301 --GGGGGFGGGAGIG-----GGGGGHH 292
BLAST of Lcy10g014870 vs. ExPASy TrEMBL
Match:
A0A067KT37 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01138 PE=4 SV=1)
HSP 1 Score: 54.7 bits (130), Expect = 8.1e-04
Identity = 233/348 (66.95%), Postives = 248/348 (71.26%), Query Frame = 0
Query: 6 LRAVAFCFCLLIAL------VGADNVEDEKRLFHRPL-------GFFKGKGFRGGGLGGG 65
L A+ C L+ A+ V D+ +D+ LFHRPL G +K KGF+ GGL G
Sbjct: 11 LGAILLCHFLVSAVFVLADRVNVDDKDDKHLLFHRPLLGGGLGHGIYK-KGFKHGGL--G 70
Query: 66 GGFGGGAGGGFGGGAGGGYGGGAGGGFGGGAGGGFGGGGGVGG--GGGLGGGGGLGG--- 125
GG GGGAGGGFGGGAGGG+GGGAGGGFGGGAGGG GGGGG+GG GGGLGGGGGLGG
Sbjct: 71 GGIGGGAGGGFGGGAGGGFGGGAGGGFGGGAGGGLGGGGGLGGGAGGGLGGGGGLGGGAG 130
Query: 126 ---GGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGLGG----------GGGLGGGGG 185
GGG+G GGGLG GI G GG+G GGGLGGGGGLGG GGGLGGGGG
Sbjct: 131 GGLGGGIGHGGGLGGGIGHGGGLGGGIGHGGGLGGGGGLGGGAGGGLGGGHGGGLGGGGG 190
Query: 186 LGHGIYKRGFKHGRFGAGGGGGLGGGGGLGG--GGGLGGGGGLGGGGGGGLGG--GGGLG 245
LG G G G G GGGLGGGGGLGG GGGLGGGGGLGGG GGGLGG GGGLG
Sbjct: 191 LGGGHGGGLGGGGGLGGGHGGGLGGGGGLGGGHGGGLGGGGGLGGGHGGGLGGGAGGGLG 250
Query: 246 G--GGGLGGGGGLGGGAGGGLGGGAGGGYGGGAGGGFGG--GGGAGGGGGFGGGAGGGF- 305
G GGGLGGGGG+GGGAGGGLGGG GGG GGGAGGG GG GGG GGGGG GGGAGGG
Sbjct: 251 GGHGGGLGGGGGIGGGAGGGLGGGHGGGLGGGAGGGLGGGHGGGLGGGGGLGGGAGGGLG 310
Query: 306 ---GGGAGGGGGIGGGGGGGFGGGGGGGFGG--GAGYGGGAGIGGGGG 309
GGG GGGGG+GGG GGG GGG GGG GG G G GGG G+GGGGG
Sbjct: 311 GGHGGGLGGGGGLGGGHGGGLGGGAGGGLGGGHGGGLGGGGGLGGGGG 355
BLAST of Lcy10g014870 vs. NCBI nr
Match:
KAG6582464.1 (hypothetical protein SDJN03_22466, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 182.2 bits (461), Expect = 6.9e-42
Identity = 261/311 (83.92%), Postives = 271/311 (87.14%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLIALVGADN-VEDEKRLFHRPLGFFKGKGFRGGGLGGGGGFGGGA 60
M SFSLRAVAF C+ IALVGADN VED+KRLFHRPLGF KG+GFRGGGL GGGFGGG
Sbjct: 1 MASFSLRAVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRGFRGGGL--GGGFGGGG 60
Query: 61 GGGFGGGAGGGYGGGAGGGFGGGA--GGGFGGGGGVGGGGGLGGGGGLGGGGGLGGGGGL 120
GGGFGGG GGG+GGGAGGGFGGGA GGG GGGGG+GGGGGLGGGGGLGGGGGLGGGGGL
Sbjct: 61 GGGFGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGL 120
Query: 121 GHGIYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGRFGAGGGGGL 180
GHGIYKRGFK GGLGGGGGLGGGGGLGGGGGLGGGGG+GHGIYKRGFK G G GGGGG+
Sbjct: 121 GHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGG--GLGGGGGI 180
Query: 181 GGGGGLGGGGGLGGGGGLGGGGGGGLGGGGGLGGGGGLGGGGGLGGGAGGGLGGGAGGGY 240
GGGGGLGGGGGLGGGGGL GGGGGLGGGGGLGGGGGLGGGGGLGGG+GGGLGGG+GGG
Sbjct: 181 GGGGGLGGGGGLGGGGGL--GGGGGLGGGGGLGGGGGLGGGGGLGGGSGGGLGGGSGGGL 240
Query: 241 GGGAGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGGGGFGGGGGGGFGGGAGY 300
GGGAGGG GG G GGG GGGAGGG GGGA GGG+GGG GGG GGG GGGFGGG G
Sbjct: 241 GGGAGGGLGG----GAGGGLGGGAGGGLGGGA--GGGLGGGAGGGLGGGAGGGFGGGGGV 299
Query: 301 GGGAGIGGGGG 309
G G G GGG G
Sbjct: 301 GAGGGFGGGAG 299
BLAST of Lcy10g014870 vs. NCBI nr
Match:
XP_022924294.1 (glycine-rich cell wall structural protein-like [Cucurbita moschata])
HSP 1 Score: 180.6 bits (457), Expect = 2.0e-41
Identity = 269/318 (84.59%), Postives = 278/318 (87.42%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLIALVGADN-VEDEKRLFHRPLGFFKGKGFRGG---GLGGGGGFG 60
M SFSLR+VAF C+ IALVGADN VED+KRLFHRPLGF KG+GFRGG G GGGGGFG
Sbjct: 14 MASFSLRSVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRGFRGGGGFGGGGGGGFG 73
Query: 61 GGAGGGFGGGAGGGYGGGAGGGFGGGAGGGFGGGGGVGGGGGLGGGGGLGGGGGLGGGGG 120
GG GGGFGGGAGGG+GGGAGGG G G GGG GGGGG+GGGGGLGGGGGLGGGGGLGGGGG
Sbjct: 74 GGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGG 133
Query: 121 LGHGIYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGRFGAGGGGG 180
LGHGIYKRGFK GGLGGGGGLGGGGGLGGGGGLGGGGG+GHGIYKRGFK G G GGGGG
Sbjct: 134 LGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGG--GLGGGGG 193
Query: 181 LGGGGGLGGGGGLGGGGGLGGGGGGGLGGGGGLGG--GGGLGG--GGGLGGGAGGGLGGG 240
+GGGGGLGGGGGLGGGGGL GGGGGLGGGGGLGG G GLGG GGGLGGGAGGGLGGG
Sbjct: 194 IGGGGGLGGGGGLGGGGGL--GGGGGLGGGGGLGGGVGSGLGGGAGGGLGGGAGGGLGGG 253
Query: 241 AGGGYGGGAGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGGGGFGGGGGGGFG 300
AGGG GGGAGGG GGG G G GGG G GAGGGFGGGAG G GIGGGGGGG G GGGGG G
Sbjct: 254 AGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGVGIGGGGGGGGGFGGGGGIG 313
Query: 301 GGAGYGGGAGIGGGGGHH 311
GGAG+GGGAG GGGGGHH
Sbjct: 314 GGAGFGGGAGFGGGGGHH 327
BLAST of Lcy10g014870 vs. NCBI nr
Match:
KAG6597296.1 (hypothetical protein SDJN03_10476, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 177.2 bits (448), Expect = 2.2e-40
Identity = 210/310 (67.74%), Postives = 219/310 (70.65%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLIALVGADNVEDEKRLFHRPLGFFKGKGFRGGGLGGGGGFGGGAG 60
M SFSLR AFCFCLLIALVGA+NVED+KR FHRPLG+FKGKGF GGG+GGGGGFGGG G
Sbjct: 1 MASFSLRFAAFCFCLLIALVGANNVEDDKRFFHRPLGYFKGKGFHGGGIGGGGGFGGGGG 60
Query: 61 GGFGGGAGGGYGGGAGGGFGGGAGGGFGGGGGVGGGGGLGGGGGLGGGGGLGGGGGLGHG 120
GGF GGG GGGGGLGGGGGLGGGGG GHG
Sbjct: 61 GGF--------------------------------GGGYGGGGGLGGGGGLGGGGGFGHG 120
Query: 121 IYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGRFGAGGGGGLGGG 180
I+K+GF+HGGLGGGGGLGGGGGLGGGGGLGGGGG+GHGIYKRGFKH RF
Sbjct: 121 IHKKGFRHGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKHRRF----------- 180
Query: 181 GGLGGGGGLGGGGGLGGGGGGGLGGGGGLGGGGGLGGGGGLGGGAGGGLGGGAGGGYGGG 240
GGGGGGLGGGGG GGGGGLGGGGGLGGG GGGLGGG GGGYGGG
Sbjct: 181 ----------------GGGGGGLGGGGGYGGGGGLGGGGGLGGGGGGGLGGGVGGGYGGG 233
Query: 241 AGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGGGGFGGGGGGGFGGGAGYGGG 300
AGGGFGGGGGAGG GGGFGGGAGGGGG+ GGGGGFGGG GYGGG
Sbjct: 241 AGGGFGGGGGAGG--------GGGFGGGAGGGGGL----------GGGGGFGGGGGYGGG 233
Query: 301 AGIGGGGGHH 311
AG GGGGGHH
Sbjct: 301 AGFGGGGGHH 233
BLAST of Lcy10g014870 vs. NCBI nr
Match:
XP_023526931.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 167.9 bits (424), Expect = 1.3e-37
Identity = 267/333 (80.18%), Postives = 276/333 (82.88%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLIALVGADN-VEDEKRLFHRPLGFFKGKGFRGGGLGGGGGFGGGA 60
M SFSLRAVAF C+ IALVGADN VED+KRLFHRPLGF KG+GFRGGGL GGGFGGG
Sbjct: 1 MASFSLRAVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRGFRGGGL--GGGFGGGG 60
Query: 61 GGGFGGGAGGGYGGGAGGGFGGGA--------------GGGFGGGGGVGGGGGLGGGGGL 120
GGGFGGG GGG+GGGAGGGFGGGA GGG GGGGG+GGGGGLGGGGGL
Sbjct: 61 GGGFGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGL 120
Query: 121 GGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFK 180
GGGGGLGGGGGLGHGIYKRGFK GGLGGGGGLGGGGGLGGGGGLGGGGG+GHGIYKRGFK
Sbjct: 121 GGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFK 180
Query: 181 HGRFGA----GGGGGLGGGGGLGGGGGLGGGGGLGGGG--GGGLGGGGGLGGGGGLGG-- 240
G G GGGGGLGGG GLGGGGGLGGGGGLGGGG GGG+GGG G G GGGLGG
Sbjct: 181 GGGLGGGGGIGGGGGLGGGSGLGGGGGLGGGGGLGGGGGLGGGVGGGLGGGAGGGLGGGA 240
Query: 241 GGGLGGGAGGGLGGGAGGGYGGGAGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGG 300
GGGLGGGAGGGLG GAGGG GGGAGGG GGG G G GGG G G+G GFGGGAG G GIGG
Sbjct: 241 GGGLGGGAGGGLGVGAGGGLGGGAGGGLGGGAGGGFGGGGGVGSGVGFGGGAGSGVGIGG 300
Query: 301 GGGGGFGGGGGGGFGGGAGYGGGAGIGGGGGHH 311
GGGGG G GGGGG GGGAG+GGGAG GGGGGHH
Sbjct: 301 GGGGGGGFGGGGGIGGGAGFGGGAGFGGGGGHH 331
BLAST of Lcy10g014870 vs. NCBI nr
Match:
XP_011652751.2 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KAE8650307.1 hypothetical protein Csa_011033 [Cucumis sativus])
HSP 1 Score: 167.2 bits (422), Expect = 2.3e-37
Identity = 257/320 (80.31%), Postives = 264/320 (82.50%), Query Frame = 0
Query: 1 MVSFSLRAVAFCFCLLIALVGAD-NVEDEKRLFHRPLGFFKG-KGFRGGGL----GGGGG 60
M FSLRAV FCFC+LIALV AD NVED K LFHRPLGF+KG K FRGGGL GGGGG
Sbjct: 30 MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 89
Query: 61 FGGGAGGGFGGGAGGGYGGGAGGGFGG--------GAGGGFGGGGGVGGGGGLGGGGGLG 120
FGGGAGGGFGGGAGGG G G GGG GG G GGG GGGGG+GGGGGLGGGGGLG
Sbjct: 90 FGGGAGGGFGGGAGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLG 149
Query: 121 GGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKH 180
GGGGLGGGGGLGHGIYKRG+K GGLGGGGGLGGGGGLGGGGGLGHGIYKRGFK
Sbjct: 150 GGGGLGGGGGLGHGIYKRGYKR------GGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKR 209
Query: 181 GRFGAGGGGGLGGGGGLGGGGGLGGGGGLGG----GGGGGLGGGGGL--GGGGGLGGGGG 240
G G GGGGGLGGGGGLGGGGGLGGGGGLGG GGGGGLGGGGGL GGGGG GGGGG
Sbjct: 210 G--GLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGGGGG 269
Query: 241 LGGGAGGGLGGGAGGGYGGGAGGGFGGGGGAGGGGGFGGGAGGGFGGGAGGGGGIGGGGG 300
LGGG+GGGLGGG GGGYGGGAGGGFGGGGGAGGGGGFGG GGGAGGGGGIGGG G
Sbjct: 270 LGGGSGGGLGGGVGGGYGGGAGGGFGGGGGAGGGGGFGG------GGGAGGGGGIGGGAG 329
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E8R1 | 9.7e-42 | 84.59 | glycine-rich cell wall structural protein-like OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1ELK4 | 4.2e-37 | 63.23 | glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111434394 PE=4 S... | [more] |
A0A0A0L443 | 1.6e-36 | 81.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131980 PE=4 SV=1 | [more] |
A0A6J1D0H4 | 2.3e-35 | 76.45 | glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111016147 PE=4... | [more] |
A0A067KT37 | 8.1e-04 | 66.95 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01138 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6582464.1 | 6.9e-42 | 83.92 | hypothetical protein SDJN03_22466, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022924294.1 | 2.0e-41 | 84.59 | glycine-rich cell wall structural protein-like [Cucurbita moschata] | [more] |
KAG6597296.1 | 2.2e-40 | 67.74 | hypothetical protein SDJN03_10476, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023526931.1 | 1.3e-37 | 80.18 | glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo] | [more] |
XP_011652751.2 | 2.3e-37 | 80.31 | glycine-rich cell wall structural protein 1 [Cucumis sativus] >KAE8650307.1 hypo... | [more] |
Match Name | E-value | Identity | Description | |