Lcy10g014500 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGCTTTCCAGTACTAGCAACAAAAAAAAAAAAAAAAAAAAAGTGAAAAAGAAAAAAAAAATCAATTATTTAGAAAAATCATGGCCAGCATGCAACAATCCTTCAAGTCAGGCCAATCCCAAGGCCATGCCCAGGTACCAAATTTTATCTTATTACCTGCCAACACAATAGAGGTTAGAGGTTCGAATCTCCATTCATGTATAGTTGAACTAAACTAAAAAAAATGTTTCGAAACTGTATGTGGAGATCCATTTCACTTTGAAATTTTTAGTAGGTTAAAATATTGCTTTGGGTTAAATCTTAAAATGGCTCATGCATTGTTAACTTTTCTAAAAAAGAATTAGTTTATTGACATTCCTTTTATCTATGGACTAAAATAGAATAAAACCCAAAATACATGAACCAAAATGATAAAATTAATATGATTGGAGATTGTTTGACTAATCTGACATCTCATATTTACAAAAATCTATGTATTCTTGTTTTGTTTTGTTTTTGACAACACATGTAAGAGGGGAGATTTGAACCACAGTTGATATATACTCGTGTTGGCAGTTTACACACGCTTTATACAGCCAAGCTAAGTATTGTTAAGACGAATATAAAAAAATGGTTTGGACTAAAATTGTGAGAATATATGTTATGATTTGATAAAGGCGAAGACTGAAGAATGGATGGAATCCGGGAAGGAAGCAGCGAAGCAGGCAAGGAACAAGGCAGCCGATGCTGCCCAATCCACCAAAGAGTCTGCCCATGAAGCCAAGCAAGAAGCTTCTGGATTCCTCCAACAGGTTTAATTGATCCCCCTCTATTTTTCCAATTTTTTTTTTCTTTTTTTCTCAAATCTTTCATATTTATCTTGTTTTTTCCTTAGATTTTGAAAAAAATAAATAAATATTCATAAATCTTTTGAATGACTTTGATATTTGCAGACTGGAGAGCAGATGATGAATATGGCTCAAGGTGCTGTGGATACTGTCAAGAATACACTTGGAATGAATGACAATAATGACATCAAGAAGAATTGAATTCTTTTTTAGCTTTTTCATTAATTTCATTTCATTTCTTTAAACACAATTATTCTTTTAAATTAATTCATTAATTAATTGTTGTCTTTTTTACTTTTATTGATTCAATGATAAGCATAAGATGAGTTGTGAAATTTCTCTTTTTCATTCATGGGAGAATTCCAACCTCTTGTAATAAAAAAATTTACTTCTTCA AAAAAGCTTTCCAGTACTAGCAACAAAAAAAAAAAAAAAAAAAAAGTGAAAAAGAAAAAAAAAATCAATTATTTAGAAAAATCATGGCCAGCATGCAACAATCCTTCAAGTCAGGCCAATCCCAAGGCCATGCCCAGGCGAAGACTGAAGAATGGATGGAATCCGGGAAGGAAGCAGCGAAGCAGGCAAGGAACAAGGCAGCCGATGCTGCCCAATCCACCAAAGAGTCTGCCCATGAAGCCAAGCAAGAAGCTTCTGGATTCCTCCAACAGACTGGAGAGCAGATGATGAATATGGCTCAAGGTGCTGTGGATACTGTCAAGAATACACTTGGAATGAATGACAATAATGACATCAAGAAGAATTGAATTCTTTTTTAGCTTTTTCATTAATTTCATTTCATTTCTTTAAACACAATTATTCTTTTAAATTAATTCATTAATTAATTGTTGTCTTTTTTACTTTTATTGATTCAATGATAAGCATAAGATGAGTTGTGAAATTTCTCTTTTTCATTCATGGGAGAATTCCAACCTCTTGTAATAAAAAAATTTACTTCTTCA ATGGCCAGCATGCAACAATCCTTCAAGTCAGGCCAATCCCAAGGCCATGCCCAGGCGAAGACTGAAGAATGGATGGAATCCGGGAAGGAAGCAGCGAAGCAGGCAAGGAACAAGGCAGCCGATGCTGCCCAATCCACCAAAGAGTCTGCCCATGAAGCCAAGCAAGAAGCTTCTGGATTCCTCCAACAGACTGGAGAGCAGATGATGAATATGGCTCAAGGTGCTGTGGATACTGTCAAGAATACACTTGGAATGAATGACAATAATGACATCAAGAAGAATTGA MASMQQSFKSGQSQGHAQAKTEEWMESGKEAAKQARNKAADAAQSTKESAHEAKQEASGFLQQTGEQMMNMAQGAVDTVKNTLGMNDNNDIKKN Homology
BLAST of Lcy10g014500 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-07 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.1e-07 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy Swiss-Prot
Match: P13939 (Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.5e-06 Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-05 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy Swiss-Prot
Match: P13934 (Late embryogenesis abundant protein 76 OS=Brassica napus OX=3708 PE=2 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 3.6e-05 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy TrEMBL
Match: A0A6J1DUG1 (late embryogenesis abundant protein 1 OS=Momordica charantia OX=3673 GN=LOC111024551 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.9e-21 Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy TrEMBL
Match: A0A498I8F1 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_001972 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20 Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy TrEMBL
Match: A0A5N5FA15 (Late embryogenesis abundant protein 1 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_010176 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20 Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy TrEMBL
Match: A0A540KXA1 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_035584 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20 Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Lcy10g014500 vs. ExPASy TrEMBL
Match: A0A540LG64 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_028986 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20 Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Lcy10g014500 vs. NCBI nr
Match: XP_022157950.1 (late embryogenesis abundant protein 1 [Momordica charantia]) HSP 1 Score: 110.2 bits (274), Expect = 1.0e-20 Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of Lcy10g014500 vs. NCBI nr
Match: XP_008391284.1 (late embryogenesis abundant protein 1 [Malus domestica] >XP_009343410.1 PREDICTED: late embryogenesis abundant protein 1-like [Pyrus x bretschneideri] >XP_009350115.1 PREDICTED: late embryogenesis abundant protein 1-like [Pyrus x bretschneideri] >KAB2599905.1 late embryogenesis abundant protein 1 [Pyrus ussuriensis x Pyrus communis] >TQD78853.1 hypothetical protein C1H46_035584 [Malus baccata] >RXH78454.1 hypothetical protein DVH24_001972 [Malus domestica]) HSP 1 Score: 107.8 bits (268), Expect = 5.0e-20 Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Lcy10g014500 vs. NCBI nr
Match: TQD85463.1 (hypothetical protein C1H46_028986 [Malus baccata]) HSP 1 Score: 107.8 bits (268), Expect = 5.0e-20 Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Lcy10g014500 vs. NCBI nr
Match: XP_008353689.1 (late embryogenesis abundant protein 1-like [Malus domestica]) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-19 Identity = 58/87 (66.67%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Lcy10g014500 vs. NCBI nr
Match: XP_026424364.1 (late embryogenesis abundant protein 1-like [Papaver somniferum] >RZC85110.1 hypothetical protein C5167_047895 [Papaver somniferum]) HSP 1 Score: 106.3 bits (264), Expect = 1.5e-19 Identity = 60/91 (65.93%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of Lcy10g014500 vs. TAIR 10
Match: AT4G13560.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11 Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Lcy10g014500 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.5e-06 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Lcy10g014500 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.5e-06 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Lcy10g014500 vs. TAIR 10
Match: AT1G52680.1 (late embryogenesis abundant protein-related / LEA protein-related ) HSP 1 Score: 45.1 bits (105), Expect = 3.7e-05 Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of Lcy10g014500 vs. TAIR 10
Match: AT3G15670.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04 Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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