Lcy10g013610 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTTGGAAGTTCCAGCGATGAATATGAGCCACAAGATCACCACCACTCGAAACACGACATCGACAACGACCCCACTAAACGCCCTTACGAGTGCACGTTTTGCAAGCGTGGCTTCACCAACGCTCAGGCCCTTGGCGGCCATATGAACATTCACCGCAAAGACCGCGCCAAAGCCAAGCACCGCAATTTTCTTCATTCCTCTTCTTCTTCCAATGACCAATTTTTCCCTCCTGTCTCAACCTCAACCCAACCCACCGCCGCCCCCTATTACCCGCCGCCGCCTTCTGGCTACCGGATGTACTTCGACACGGCGGCTGCCACGCCCGGGCACTTCCCCATTCATCACCAGCAGAGATCGCAGAGCGTGAATGAAGAGCTGCTCGGGGCGAATCTCAGCCTCCAGATTGATCAAACCAGGGGTGTCTGGAAAAATGAAGAGGTCGATTTGGAGCTTCGATTAGGCCATGAATATCGCTGA ATGGATTTTGGAAGTTCCAGCGATGAATATGAGCCACAAGATCACCACCACTCGAAACACGACATCGACAACGACCCCACTAAACGCCCTTACGAGTGCACGTTTTGCAAGCGTGGCTTCACCAACGCTCAGGCCCTTGGCGGCCATATGAACATTCACCGCAAAGACCGCGCCAAAGCCAAGCACCGCAATTTTCTTCATTCCTCTTCTTCTTCCAATGACCAATTTTTCCCTCCTGTCTCAACCTCAACCCAACCCACCGCCGCCCCCTATTACCCGCCGCCGCCTTCTGGCTACCGGATGTACTTCGACACGGCGGCTGCCACGCCCGGGCACTTCCCCATTCATCACCAGCAGAGATCGCAGAGCGTGAATGAAGAGCTGCTCGGGGCGAATCTCAGCCTCCAGATTGATCAAACCAGGGGTGTCTGGAAAAATGAAGAGGTCGATTTGGAGCTTCGATTAGGCCATGAATATCGCTGA ATGGATTTTGGAAGTTCCAGCGATGAATATGAGCCACAAGATCACCACCACTCGAAACACGACATCGACAACGACCCCACTAAACGCCCTTACGAGTGCACGTTTTGCAAGCGTGGCTTCACCAACGCTCAGGCCCTTGGCGGCCATATGAACATTCACCGCAAAGACCGCGCCAAAGCCAAGCACCGCAATTTTCTTCATTCCTCTTCTTCTTCCAATGACCAATTTTTCCCTCCTGTCTCAACCTCAACCCAACCCACCGCCGCCCCCTATTACCCGCCGCCGCCTTCTGGCTACCGGATGTACTTCGACACGGCGGCTGCCACGCCCGGGCACTTCCCCATTCATCACCAGCAGAGATCGCAGAGCGTGAATGAAGAGCTGCTCGGGGCGAATCTCAGCCTCCAGATTGATCAAACCAGGGGTGTCTGGAAAAATGAAGAGGTCGATTTGGAGCTTCGATTAGGCCATGAATATCGCTGA MDFGSSSDEYEPQDHHHSKHDIDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFLHSSSSSNDQFFPPVSTSTQPTAAPYYPPPPSGYRMYFDTAAATPGHFPIHHQQRSQSVNEELLGANLSLQIDQTRGVWKNEEVDLELRLGHEYR Homology
BLAST of Lcy10g013610 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08 Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07 Identity = 31/68 (45.59%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07 Identity = 37/97 (38.14%), Postives = 51/97 (52.58%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.9e-07 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06 Identity = 49/169 (28.99%), Postives = 72/169 (42.60%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy TrEMBL
Match: A0A6J1E9V2 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111432102 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 6.5e-58 Identity = 131/176 (74.43%), Postives = 138/176 (78.41%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy TrEMBL
Match: A0A6J1IWL0 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111479150 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57 Identity = 132/179 (73.74%), Postives = 137/179 (76.54%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy TrEMBL
Match: A0A1S3AZA2 (zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 5.5e-57 Identity = 131/174 (75.29%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy TrEMBL
Match: A0A6J1DD81 (zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.0e-51 Identity = 120/172 (69.77%), Postives = 131/172 (76.16%), Query Frame = 0
BLAST of Lcy10g013610 vs. ExPASy TrEMBL
Match: A0A6J1IGJ1 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111474605 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48 Identity = 122/168 (72.62%), Postives = 129/168 (76.79%), Query Frame = 0
BLAST of Lcy10g013610 vs. NCBI nr
Match: XP_038877191.1 (zinc finger protein 7-like [Benincasa hispida]) HSP 1 Score: 244.6 bits (623), Expect = 5.9e-61 Identity = 135/172 (78.49%), Postives = 144/172 (83.72%), Query Frame = 0
BLAST of Lcy10g013610 vs. NCBI nr
Match: XP_022924669.1 (transcriptional regulator SUPERMAN-like [Cucurbita moschata]) HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57 Identity = 131/176 (74.43%), Postives = 138/176 (78.41%), Query Frame = 0
BLAST of Lcy10g013610 vs. NCBI nr
Match: XP_022979419.1 (zinc finger protein 11-like [Cucurbita maxima]) HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57 Identity = 132/179 (73.74%), Postives = 137/179 (76.54%), Query Frame = 0
BLAST of Lcy10g013610 vs. NCBI nr
Match: KAG7018777.1 (Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231.1 bits (588), Expect = 6.7e-57 Identity = 131/180 (72.78%), Postives = 137/180 (76.11%), Query Frame = 0
BLAST of Lcy10g013610 vs. NCBI nr
Match: KAG6582366.1 (Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230.7 bits (587), Expect = 8.7e-57 Identity = 131/181 (72.38%), Postives = 137/181 (75.69%), Query Frame = 0
BLAST of Lcy10g013610 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11 Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of Lcy10g013610 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of Lcy10g013610 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09 Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of Lcy10g013610 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 5.5e-09 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of Lcy10g013610 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08 Identity = 37/97 (38.14%), Postives = 51/97 (52.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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