Lcy10g012400 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGCAACCGATCCTCATCTTTTCCCCAACTGGATAACACCATGTAATGATTCTTGTGGGGTCTCTTAAACTTTAGACAGATTGGCCAGCTGTGGCCAATGACCCACCATCTCACATGCTCAGCCAATGTGGTTTTAACTCACCCATCACTCCCTTTTTCCCTCTTCTAAATTCTATATATCCTCTCTCTCTCCCACCTGATAGAGAGAGAAGAAAGAAAGGAAAAAAAAAGTGTGTGCGTGTGTTGTAACACTTGTAATTCTCTCTTCAGCTCTTTTGCTAACAGACATCCACCCTGCAACTGCAAGCTAACTCTCTTATTGCAGTTCTGAGTATAGACAACATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTCTCTCTTCTTCTCATGGATGACAACGAAGATCCTCTCCCTCATCATCCACACGTTTCTCTTCAGGTACTTCCTTTTTCAAAATCTCAGTCCGTTGAGCCAATACGAATATAGCTCAACAGTTAAGATATTACTATTTTTTCCGTGAGGTCGTAGGTTCAAATCCCTCCTCGAGTGGGATGTTGTATTTTCAAATTTTCAACTTGGGTGTTGTCCAATCTTCAAAACCAAGAACTTTTTTAGTTTCTCTGTTGGATTGTATTTCTCTGTTGGATTGTATTTCTCTGTTGTGGCTGTGAACTCAAACAAGATGTGATCAATTTGCAGGCTCTCTCTCATGGAGGCTATCAGCCCACACAGCCACTGGCGGTGCATGACCATGCCACGGCTGTTGCCGCCGCCTACAGCGGCGTAAGCAAGGGGACCGGCGTGTTCATCCCTAGGTCTCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAATAACATAAAGGCAAATCGACAGTTTCCAATCGCTATTGATGTGAACTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTTAAGGATTCGAGGAATTTGACGAAAAGGGTATCAGAATTCAGATTAAAAAATAATTCTTTCACCAAGTATTAAGTATGGTGATGCTGTACATGGAAGAAGCTATAGTATTAGCCGTGTTAATTACTGGGTCTTAATTGGTTTATGTGGTTCATTGGAAGGTTAATTAACCTAAGGTTTGTGAACCTCCCCACCCCTCCTTGTGAAAAATTAATGGTTGTTCTAATGATATGCCAATTTTATTCTCTTCTCCTCTGTCTTGTTATTCCATTTTTGTTTACGGGTTGAGTTGTAAACTTTAGAGGAAGAGAAGGAGAAAGAGAGGTCTTGAAAAGATAGTTGTTTTGTCGATCTGAATCCGACAGAGTCGTCAACTTGAGCATAGCTCAACTGATTAAGAAACATGACTCCAATAAAGGAGATCGGAGATTTGAACTCCCAATCCATTTGTTGAATCTGACAGAGTCATTAGACTGCAAAAGCTGAGATGAGTTGAATCTGTGTTTTGATTGTGAGTGTTCAGATTTTGAAGAATATGCCCTTAACTGGCAGCCCTGCAGTGGCACATGAGCTTTTATGTTTGAATAGCTGGATCTTTGTTGCACAGAAAGCAAAAGTTCTCCAAACATATTCACTGAGAGACAGAGGAGAGACAGAGATTTGAGAGTTTAATTTGGAATTCTGTAATTATTAAGTTTTACATAAAGTATACCAAGATGATGGGTGTATTATGAGGGGTGGTGTGGTCAAAATGTTTTTCAAAGTATAGTCACTTTTTTCTATTAGTTTTTCTTTTTT CGGCAACCGATCCTCATCTTTTCCCCAACTGGATAACACCATGTAATGATTCTTGTGGGGTCTCTTAAACTTTAGACAGATTGGCCAGCTGTGGCCAATGACCCACCATCTCACATGCTCAGCCAATGTGGTTTTAACTCACCCATCACTCCCTTTTTCCCTCTTCTAAATTCTATATATCCTCTCTCTCTCCCACCTGATAGAGAGAGAAGAAAGAAAGGAAAAAAAAAGTGTGTGCGTGTGTTGTAACACTTGTAATTCTCTCTTCAGCTCTTTTGCTAACAGACATCCACCCTGCAACTGCAAGCTAACTCTCTTATTGCAGTTCTGAGTATAGACAACATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTCTCTCTTCTTCTCATGGATGACAACGAAGATCCTCTCCCTCATCATCCACACGTTTCTCTTCAGGCTCTCTCTCATGGAGGCTATCAGCCCACACAGCCACTGGCGGTGCATGACCATGCCACGGCTGTTGCCGCCGCCTACAGCGGCGTAAGCAAGGGGACCGGCGTGTTCATCCCTAGGTCTCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAATAACATAAAGGCAAATCGACAGTTTCCAATCGCTATTGATGTGAACTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTTAAGGATTCGAGGAATTTGACGAAAAGGGTATCAGAATTCAGATTAAAAAATAATTCTTTCACCAAGTATTAAGTATGGTGATGCTGTACATGGAAGAAGCTATAGTATTAGCCGTGTTAATTACTGGGTCTTAATTGGTTTATGTGGTTCATTGGAAGGTTAATTAACCTAAGGTTTGTGAACCTCCCCACCCCTCCTTGTGAAAAATTAATGGTTGTTCTAATGATATGCCAATTTTATTCTCTTCTCCTCTGTCTTGTTATTCCATTTTTGTTTACGGGTTGAGTTGTAAACTTTAGAGGAAGAGAAGGAGAAAGAGAGGTCTTGAAAAGATAGTTGTTTTGTCGATCTGAATCCGACAGAGTCGTCAACTTGAGCATAGCTCAACTGATTAAGAAACATGACTCCAATAAAGGAGATCGGAGATTTGAACTCCCAATCCATTTGTTGAATCTGACAGAGTCATTAGACTGCAAAAGCTGAGATGAGTTGAATCTGTGTTTTGATTGTGAGTGTTCAGATTTTGAAGAATATGCCCTTAACTGGCAGCCCTGCAGTGGCACATGAGCTTTTATGTTTGAATAGCTGGATCTTTGTTGCACAGAAAGCAAAAGTTCTCCAAACATATTCACTGAGAGACAGAGGAGAGACAGAGATTTGAGAGTTTAATTTGGAATTCTGTAATTATTAAGTTTTACATAAAGTATACCAAGATGATGGGTGTATTATGAGGGGTGGTGTGGTCAAAATGTTTTTCAAAGTATAGTCACTTTTTTCTATTAGTTTTTCTTTTTT ATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTCTCTCTTCTTCTCATGGATGACAACGAAGATCCTCTCCCTCATCATCCACACGTTTCTCTTCAGGCTCTCTCTCATGGAGGCTATCAGCCCACACAGCCACTGGCGGTGCATGACCATGCCACGGCTGTTGCCGCCGCCTACAGCGGCGTAAGCAAGGGGACCGGCGTGTTCATCCCTAGGTCTCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAATAACATAAAGGCAAATCGACAGTTTCCAATCGCTATTGATGTGAACTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTTAA MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALSHGGYQPTQPLAVHDHATAVAAAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPIAIDVNSQVSNNNSLRPKKG Homology
BLAST of Lcy10g012400 vs. ExPASy TrEMBL
Match: A0A6J1F5U9 (uncharacterized protein LOC111441102 OS=Cucurbita moschata OX=3662 GN=LOC111441102 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.3e-55 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lcy10g012400 vs. ExPASy TrEMBL
Match: A0A6J1I9A5 (uncharacterized protein LOC111472261 OS=Cucurbita maxima OX=3661 GN=LOC111472261 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55 Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lcy10g012400 vs. ExPASy TrEMBL
Match: A0A0A0LAE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149910 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.7e-48 Identity = 108/126 (85.71%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of Lcy10g012400 vs. ExPASy TrEMBL
Match: A0A5D3D068 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00190 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.8e-47 Identity = 107/125 (85.60%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Lcy10g012400 vs. ExPASy TrEMBL
Match: A0A1S3AX25 (uncharacterized protein LOC103483733 OS=Cucumis melo OX=3656 GN=LOC103483733 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.8e-47 Identity = 107/125 (85.60%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Lcy10g012400 vs. NCBI nr
Match: XP_022933798.1 (uncharacterized protein LOC111441102 [Cucurbita moschata] >XP_022933806.1 uncharacterized protein LOC111441102 [Cucurbita moschata]) HSP 1 Score: 224.6 bits (571), Expect = 4.8e-55 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lcy10g012400 vs. NCBI nr
Match: XP_022973676.1 (uncharacterized protein LOC111472261 [Cucurbita maxima]) HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55 Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lcy10g012400 vs. NCBI nr
Match: XP_023539236.1 (uncharacterized protein LOC111799938 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lcy10g012400 vs. NCBI nr
Match: KAG6597461.1 (hypothetical protein SDJN03_10641, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lcy10g012400 vs. NCBI nr
Match: KAG7028920.1 (hypothetical protein SDJN02_10103 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lcy10g012400 vs. TAIR 10
Match: AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 6.4e-13 Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of Lcy10g012400 vs. TAIR 10
Match: AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 51/128 (39.84%), Postives = 72/128 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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