Lcy10g011620 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g011620
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Transcription termination factor MTEF1
Location	Chr10: 39832399 .. 39832902 (-)
RNA-Seq Expression	Lcy10g011620
Synteny	Lcy10g011620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTTAGAGTGGAGAAAATGGGACTATTTGACTGCGAAGAGTGGAGATTTGTGTATTCTGTTTACTGTGTCGGTCGAGTGAGTGAAAGTGAATGGGAAAAGAAACTTCAAACTTACCATAACTGGGGTCTTTCCAAGGAACAAGTCTATGAAGCTTTTAAGAAACATCCCGTGATTTTGTTGTCTTCACCTCTAAAAATCAATGGAGTTTTGAAGTTTTTGGTAAACACTGTGGGCCTTTCTCCTTCTATCCTTTTACGATTTCCACATTTGATAGACCATAGTATCAAATATAGATACATCTCTAGATGGGCTGTTTATCAAACGTTGATATCTAGTGGTTCGATAGAAGAAAAGGAAAACACTTGGACCATATTTGAGCTTTCTGAAAAAAAATTCTACAAACAGTTCATTGACCCATATGATGATCAACAAATGAACTTGTCCAAGTTCTATGAAGAGAAGAGGCGGAAGAGGGGAAGGCCACAACCATCCGAGTGA

mRNA sequence

ATGGTTTTTAGAGTGGAGAAAATGGGACTATTTGACTGCGAAGAGTGGAGATTTGTGTATTCTGTTTACTGTGTCGGTCGAGTGAGTGAAAGTGAATGGGAAAAGAAACTTCAAACTTACCATAACTGGGGTCTTTCCAAGGAACAAGTCTATGAAGCTTTTAAGAAACATCCCGTGATTTTGTTGTCTTCACCTCTAAAAATCAATGGAGTTTTGAAGTTTTTGGTAAACACTGTGGGCCTTTCTCCTTCTATCCTTTTACGATTTCCACATTTGATAGACCATAGTATCAAATATAGATACATCTCTAGATGGGCTGTTTATCAAACGTTGATATCTAGTGGTTCGATAGAAGAAAAGGAAAACACTTGGACCATATTTGAGCTTTCTGAAAAAAAATTCTACAAACAGTTCATTGACCCATATGATGATCAACAAATGAACTTGTCCAAGTTCTATGAAGAGAAGAGGCGGAAGAGGGGAAGGCCACAACCATCCGAGTGA

Coding sequence (CDS)

ATGGTTTTTAGAGTGGAGAAAATGGGACTATTTGACTGCGAAGAGTGGAGATTTGTGTATTCTGTTTACTGTGTCGGTCGAGTGAGTGAAAGTGAATGGGAAAAGAAACTTCAAACTTACCATAACTGGGGTCTTTCCAAGGAACAAGTCTATGAAGCTTTTAAGAAACATCCCGTGATTTTGTTGTCTTCACCTCTAAAAATCAATGGAGTTTTGAAGTTTTTGGTAAACACTGTGGGCCTTTCTCCTTCTATCCTTTTACGATTTCCACATTTGATAGACCATAGTATCAAATATAGATACATCTCTAGATGGGCTGTTTATCAAACGTTGATATCTAGTGGTTCGATAGAAGAAAAGGAAAACACTTGGACCATATTTGAGCTTTCTGAAAAAAAATTCTACAAACAGTTCATTGACCCATATGATGATCAACAAATGAACTTGTCCAAGTTCTATGAAGAGAAGAGGCGGAAGAGGGGAAGGCCACAACCATCCGAGTGA

Protein sequence

MVFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVILLSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEKENTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEKRRKRGRPQPSE

Homology

[Close]

BLAST of Lcy10g011620 vs. ExPASy TrEMBL
Match: A0A1S4DSL1 (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.4e-23
Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 2   VFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVIL 61
           V RV++MG F+ ++ +FV +V+ +  +++S W+KK++ Y  WGLS+E++  AF+K P+ +
Sbjct: 206 VERVKEMG-FNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCM 265

Query: 62  LSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEKE 121
             S  KINGV+ F VN +G   S   R P L+  S+K R + R  +YQ L+S G I++ E
Sbjct: 266 AFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE 325

Query: 122 NTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
           N    FE  EK+F ++FI+P+ +Q   L + YEEK
Sbjct: 326 NLAWFFESPEKRFIEKFINPHTEQISGLLELYEEK 359

[Close]

BLAST of Lcy10g011620 vs. ExPASy TrEMBL
Match: A0A5D3CY08 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00850 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-23
Identity = 63/155 (40.65%), Postives = 99/155 (63.87%), Query Frame = 0


Query: 2   VFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVIL 61
           V RV++MG F+ ++ +FV +V+ +  ++ S W+KK++ Y  WGLS+E++  AF+K P+ +
Sbjct: 439 VERVKEMG-FNPQQLQFVVAVFILRAMTRSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCM 498

Query: 62  LSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEKE 121
             S  KINGV+ F VN +G   S   R P L+  S+K R + R  +YQ L+S G I++ E
Sbjct: 499 AFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE 558

Query: 122 NTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
           N    FE  EK+F ++FI+P+ +Q   L + YEEK
Sbjct: 559 NLAWFFESPEKRFIEKFINPHTEQISGLLELYEEK 592

[Close]

BLAST of Lcy10g011620 vs. ExPASy TrEMBL
Match: A0A6J1I9L4 (transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472348 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 7.1e-23
Identity = 61/156 (39.10%), Postives = 98/156 (62.82%), Query Frame = 0


Query: 1   MVFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVI 60
           +V  V++MG F+    +FV +V+ +  +S+S W+KK++ Y  WG  +E++  AF +HP  
Sbjct: 203 IVEEVKEMG-FNPLRLKFVLAVFALRAMSKSTWKKKVEVYRKWGWPEEEILFAFGRHPWC 262

Query: 61  LLSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEK 120
           +++S  KINGV+ F VN +G   S + R P LI HS+K R + R +VYQ L+S+G I++ 
Sbjct: 263 MMASADKINGVMDFFVNQIGCESSYIARIPSLISHSLKKRIVPRGSVYQVLLSNGLIKKH 322

Query: 121 ENTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
            N   +F  +EK+F  +FI+P+  +   L K Y EK
Sbjct: 323 VNLPLLFVSTEKRFLDKFIEPHKKRIPGLLKLYTEK 357

[Close]

BLAST of Lcy10g011620 vs. ExPASy TrEMBL
Match: A0A6J1EZH0 (uncharacterized protein LOC111440613 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440613 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 9.3e-23
Identity = 61/156 (39.10%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 1   MVFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVI 60
           +V  V++MG F+     FV +V+ +  +S+S W KK++ Y  WG  +E++  AF++HP  
Sbjct: 298 IVEEVKEMG-FNPLRLNFVLAVFAMRAMSKSTWRKKVEVYKKWGWPEEEILSAFRRHPWC 357

Query: 61  LLSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEK 120
           +++S  KINGV+ F VN +G  PS + + P LI  S+K R + R +VYQ L+S G I++ 
Sbjct: 358 MMASEDKINGVMDFFVNKIGCEPSYIAKRPALISLSLKKRIVPRGSVYQVLLSKGLIKKD 417

Query: 121 ENTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
            N   +FE +E +F  +FIDP+ +    L K Y+EK
Sbjct: 418 VNLPFLFESAENRFLDKFIDPHKELIPGLLKLYKEK 452

[Close]

BLAST of Lcy10g011620 vs. ExPASy TrEMBL
Match: A0A6J1GWY1 (transcription termination factor MTERF4, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457902 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 9.3e-23
Identity = 60/156 (38.46%), Postives = 98/156 (62.82%), Query Frame = 0


Query: 1   MVFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVI 60
           +V  V++MG F+    +FV +V+ +  +S+S W KK++ Y  WG  +E++  AF++HP  
Sbjct: 204 IVEEVKEMG-FNPLRLKFVLAVFAMRAMSKSTWRKKVEVYKKWGWPEEEILSAFRRHPWC 263

Query: 61  LLSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEK 120
           +++S  KINGV+ F VN +G  PS + + P LI  S+K R + R +VYQ L+S G I++ 
Sbjct: 264 MMASEDKINGVMDFFVNKIGCEPSYIAKRPALISLSLKKRIVPRGSVYQALLSKGLIKKD 323

Query: 121 ENTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
            N   +F+ +E +F  +FIDP+ +    L K Y+EK
Sbjct: 324 VNLPLLFDSTESRFLAKFIDPHKELIPELLKLYKEK 358

[Close]

BLAST of Lcy10g011620 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-23
Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 2   VFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVIL 61
           V RV++MG F+ ++ +FV +V+ +  +++S W+KK++ Y  WGLS+E++  AF+K P+ +
Sbjct: 206 VERVKEMG-FNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCM 265

Query: 62  LSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEKE 121
             S  KINGV+ F VN +G   S   R P L+  S+K R + R  +YQ L+S G I++ E
Sbjct: 266 AFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE 325

Query: 122 NTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
           N    FE  EK+F ++FI+P+ +Q   L + YEEK
Sbjct: 326 NLAWFFESPEKRFIEKFINPHTEQISGLLELYEEK 359

[Close]

BLAST of Lcy10g011620 vs. NCBI nr
Match: XP_023521670.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-23
Identity = 61/156 (39.10%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 1   MVFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVI 60
           +V  V++MG F+    +FV +V+ +  +S+S W+KK++ Y  WG  +E++  AF++HP  
Sbjct: 203 IVEEVKEMG-FNPLRLKFVVAVFALRAMSKSTWKKKVEVYRKWGWPEEEILFAFRRHPCC 262

Query: 61  LLSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEK 120
           +++S  KINGV+ F VN +G   S + R P LI HS+K R + R +VYQ L+S+G I++ 
Sbjct: 263 MMASEDKINGVVDFFVNQIGCESSYIARIPSLISHSLKKRLVPRGSVYQVLLSNGLIKKH 322

Query: 121 ENTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
            N   +F  +EK+F  +FI+P+  +   L K Y EK
Sbjct: 323 VNLPLLFVSTEKRFLDKFIEPHKKRIPELFKLYTEK 357

[Close]

BLAST of Lcy10g011620 vs. NCBI nr
Match: KAA0049478.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16158.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-23
Identity = 63/155 (40.65%), Postives = 99/155 (63.87%), Query Frame = 0


Query: 2   VFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVIL 61
           V RV++MG F+ ++ +FV +V+ +  ++ S W+KK++ Y  WGLS+E++  AF+K P+ +
Sbjct: 439 VERVKEMG-FNPQQLQFVVAVFILRAMTRSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCM 498

Query: 62  LSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEKE 121
             S  KINGV+ F VN +G   S   R P L+  S+K R + R  +YQ L+S G I++ E
Sbjct: 499 AFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE 558

Query: 122 NTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
           N    FE  EK+F ++FI+P+ +Q   L + YEEK
Sbjct: 559 NLAWFFESPEKRFIEKFINPHTEQISGLLELYEEK 592

[Close]

BLAST of Lcy10g011620 vs. NCBI nr
Match: XP_023539068.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-23
Identity = 61/156 (39.10%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 1   MVFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVI 60
           +V  V++MG F+    +FV +V+ +  +S+S W+KK++ Y  WG  +E++  AF++HP  
Sbjct: 203 IVEEVKEMG-FNPLRLKFVVAVFALRAMSKSTWKKKVEVYRKWGWPEEEILFAFRRHPCC 262

Query: 61  LLSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEK 120
           +++S  KINGV+ F VN +G   S + R P LI HS+K R + R +VYQ L+S+G I++ 
Sbjct: 263 MMASEDKINGVVDFFVNQIGCESSYIARIPSLISHSLKKRLVPRGSVYQVLLSNGLIKKH 322

Query: 121 ENTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
            N   +F  +EK+F  +FI+P+  +   L K Y EK
Sbjct: 323 VNLPLLFVSTEKRFLDKFIEPHKKRIPELFKLYTEK 357

[Close]

BLAST of Lcy10g011620 vs. NCBI nr
Match: XP_011651044.1 (uncharacterized protein LOC101221507 isoform X2 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 6.6e-23
Identity = 59/155 (38.06%), Postives = 99/155 (63.87%), Query Frame = 0


Query: 2   VFRVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVIL 61
           V RV++MG F+ ++W+FV +V+C+  +++S W+KK++ Y  WGLS+E++  AF+KHP  +
Sbjct: 86  VERVKEMG-FNTQQWQFVDAVFCLRSMTKSTWDKKVEAYRKWGLSEEEIRSAFRKHPRCM 145

Query: 62  LSSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEKE 121
             S  KING + F +N +    S   R P L+  S+K R + R  VY+ L+S G I++ +
Sbjct: 146 TFSEDKINGAMDFFINKMEYESSFAARRPILLQLSLKKRLLPRGHVYEVLLSKGLIKKHQ 205

Query: 122 NTWTIFELSEKKFYKQFIDPYDDQQMNLSKFYEEK 157
           N   + +  EK F +++I+P+ +Q   L + YEEK
Sbjct: 206 NLPFLLKSPEKHFIEKYINPHKEQIPGLLELYEEK 239

[Close]

BLAST of Lcy10g011620 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-15
Identity = 42/151 (27.81%), Postives = 89/151 (58.94%), Query Frame = 0


Query: 4   RVEKMGLFDCEEWRFVYSVYCV-GRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVILL 63
           + ++MG F+ ++  FV +++ + G+ ++S W+K  + Y  WG S++ +  AFKKHP  ++
Sbjct: 250 QAQEMG-FNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 309

Query: 64  SSPLKINGVLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEKEN 123
            S  KIN  +++ VN + ++P  + + P ++  S++ R I R +V + L+S+G ++E  +
Sbjct: 310 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 369

Query: 124 TWTIFELSEKKFYKQFIDPYDDQQMNLSKFY 154
             ++    EK F ++ +  Y+++   L   Y
Sbjct: 370 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of Lcy10g011620 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 61.6 bits (148), Expect = 6.8e-10
Identity = 42/148 (28.38%), Postives = 76/148 (51.35%), Query Frame = 0


Query: 11  FDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVILLSSPLKING 70
           FD ++  FV+++      SES  E+K + +  +G SKE    A  + P  +  S  KI  
Sbjct: 243 FDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMY 302

Query: 71  VLKFLVNTVGLSPSILLRFPHLIDHSIKYRYISRWAVYQTLISSGSIEEKE-NTWTIFEL 130
            L++LVN +GL    ++  P ++  S++ R   R  V   L+S G +++++ N +TI +L
Sbjct: 303 TLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKL 362

Query: 131 SEKKFYKQFIDPYDDQQMNLSKFYEEKR 158
              +F  +F+  Y D+   L + +   R
Sbjct: 363 KSSEFMDKFVLKYQDEMPQLVQPFTSNR 390

[Close]

BLAST of Lcy10g011620 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.0e-05
Identity = 43/180 (23.89%), Postives = 75/180 (41.67%), Query Frame = 0


Query: 4   RVEKMGLFDCEEWRFVYSVYCVGRVSESEWEKKLQTYHNWGLSKEQVYEAFKKHPVILLS 63
           +V +MG FD    +FV ++  V R+S+   E K+  Y   G   E V+  FK+ P  L  
Sbjct: 229 KVVEMG-FDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTH 288

Query: 64  SPLKINGVL-----------------------------------KFLVNTVGLSPSILLR 123
           S  KI   +                                   +FLV  +      L+ 
Sbjct: 289 SEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVS 348

Query: 124 FPHLIDHSIKYRYISRWAVYQTLISSGSI-EEKENTWTIFELSEKKFYKQFIDPYDDQQM 148
            P ++ +S++ R + R  V Q LIS G I  E  +   +F  +++ F  +++  ++D+Q+
Sbjct: 349 NPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHEDKQL 407

The following BLAST results are available for this feature:

BLAST of Lcy10g011620 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g011620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DSL1	1.4e-23	40.65	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
A0A5D3CY08	1.9e-23	40.65	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1I9L4	7.1e-23	39.10	transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita maxima ...	[more]
A0A6J1EZH0	9.3e-23	39.10	uncharacterized protein LOC111440613 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GWY1	9.3e-23	38.46	transcription termination factor MTERF4, chloroplastic-like isoform X1 OS=Cucurb...	[more]

BLAST of Lcy10g011620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898974.1	3.0e-23	40.65	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]
XP_023521670.1	3.9e-23	39.10	transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subs...	[more]
KAA0049478.1	3.9e-23	40.65	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16158.1 tr...	[more]
XP_023539068.1	3.9e-23	39.10	transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subs...	[more]
XP_011651044.1	6.6e-23	38.06	uncharacterized protein LOC101221507 isoform X2 [Cucumis sativus]	[more]

BLAST of Lcy10g011620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	2.4e-15	27.81	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	6.8e-10	28.38	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	3.0e-05	23.89	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 7..146 e-value: 5.0E-23 score: 83.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 27..134 e-value: 1.2E-8 score: 34.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 2..159
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 2..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g011620.1	Lcy10g011620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding