Lcy10g011610 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g011610
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Xanthine/uracil permease family protein
Location	Chr10: 39815364 .. 39820455 (+)
RNA-Seq Expression	Lcy10g011610
Synteny	Lcy10g011610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATCACTCCTTATCTGTGCCAAGAAATCACTAGAGCATGTATACGTTGCGGGGCCCTTCGTTATGGTATGCCATATAACAATTAATTAACATTTCTTAAATATCCTTTCTATTTATTTTTTTTTTTTAATTCGTTATTGTTTTTCTTATATTATAACTCTTTCTTTTGATTAATTAACTATGCAGCAAAGTTGACCTTGTGTGCCTCTAATGAATACCAACTGATTCCTAATATTGAGTCCGCCAACCTCCTTCTGGTCGGTTTCTTAATACCAGTTAATTAATTTCATTTCATTTCATTTCATTTGATATATTATTATTCTCGAATTTGTTGATTTTATATATTAAAGTTGCATGTTATTGTCTGTTTGTTGTATTCGTTCAGAATTATGCTAAAGATCACAATGACGTCAAACTCATGGTTGAAACTTTCAAACTCATAACAACGAACAAGTTGCCACTGGAACCTGATACTGCAGAAATCATTTTCAAGTATAGTTCTCAATATATACATATATCATTGTTCATAATTAATTATATGATTGAAAGTCTGTAATTAATTAATTTGCAGAATTTGTCATAACGTGGATAATTGGGAGTTGCTTTCCAAGTACTCAACAAAATTCCTCTCATCTGGAGTGAAACTTCACCAATCATCTTATGAAATATTGATGGAATTTGCTGCTAAAATAGGTAGCTTTAATTTGTTGTATTACTTGACTTGACATGTTATACTTGCTTTAGGCTCTCTTCATTTTTTTTCCCATTTCTTTCTTTCTTCTTTCTCCAGCTTCTTCTTCTTATTATTATTGCATTGAAATTAAAATAATTTGAGTTACGTTGGACTGTCTCTTAAATTATGTACAAATTCGCCATATTGAATAATAGTTTCTAACCAACTTTTCATGCATATAGGAGATGTTGATTGTCTACGAACATTTGAAAAGGCCAGATCTGAAATAATAATGAAGGAACATACTTGTAGGAGTGGATTTTCATATGCTAAGGTAATGAAATTCATGGCATATATATATGTGTGTGTGTGAGTTTCCAATTTGTTGTTAAAGAATGATTCCAATTGAATATTGGAAGGTGACAATCAATTACCACAAACTCATTCCCATCAATTAATTTATTATCCACCTAGGGATTAGGGATTTAATCTTCATTTCTTTACTCAACTAATTTCAGGGTCTTCTATTAGAAGGTAAGCCTGAAGAAGCTGCTAAAGTCATCATAGAAATCTTGCTTCAGGTGATTGACCCATCGACCTTTGGGTTTTTAAAAAATAAAGTTGCATTTGGTTAAAATTGTAACAGTGACTCGAACCAAATATCAGAAGTAGTTTAGTCTGTTTTTAATTAAAGTGTGAAAATGAAATGATATTAATAAATTTGTGGTTTAATTTCGATTTGTACTTGTTTGGTGGCAGTTCTTGCCAGTGGTAGACGATAGTCGCTTTACGACTCTCCTCCCAGCGAGGGCTGGCCTGGAATGGCCAAATGATCTTTTGAGTCTGTTCCAAGACGACGACATGGAGTGGCCGAAGGAACTTAAGATTTTGATCCAAAGGCTCGTGCAAGAGTGGCCTGCGGAACTTATAAAACTCCAAAAAGATGCTAACAAAAAACGGGTATATAATTTATAATTAAATAGTCCATCATTGTTTATGCCTCATTTATTTTATTAATTTCAACATTTTCAAGACCTAATTAATTCTCTCCACCTGTTTTGTTTTATTCTATAGGAATATGCTGCAACTCTCAAATCTTGTATTCCTAAGATGGTCGATTATCTCTCTATCAATGGCCTCAAGTTGAAACTAAATCTTGACCATCTAAATTGGCTAGACAAGTAGTTTGCTTAGTTTCTCAAAATGCACCACCAATCCCTCTCTTAGGGGGTTTTCTTTTATTTCTTCTAATTTGTTTTTCCTCCACAAACATTGACGTCTTTATCCACTAAACTATGTTTCGAATAGTTGTTGTCATTCATGTTACTTATACAGTTTAAATACAATTGTCTGGAGAATATATTTATTGATCATTTCATTTTCAAGGGCGAATCACAAGTTTTGATATATACGGAATATGAATGATTATTTTTTGGAGAGTGAATGAGGGAAAGTAAAGGTATGAGAGATTTTGGCAAAATATGGAGAGTTGTTTTGGGGGAAAAAATGGATAGTGATTTCAAGGAGGATTGAATGGTTTTGGGAAATTAATTTGGGGAGGGATGGCAACCATTTTATTATTATTATTTTTTCACTTTTCTTATTTTTAAAAATATAAAATAAGGAAAATTGAAACGAAACTTTACACTTAACTCTCATTCTCAACAACGGCTAAAACAACATTTTATTGAAAAATGGTCATCATAAAATTTAGGAAGAATTTAGTTTGCTCAACGTGCACGGTCAGGTGGGACTGAGTGCCTTTAGGCACACGACATGAATCTCGTCGAACATGAGATGTTGTGGTGTTGCTTGTCGTCCTCAAGTAAAGGTATGAGAGATTTTGGCAAAATATGGAGAGCTGTTTTGAGGAAAAAATGGATAGTGATTTCAAGGAGGATTGAATGGTTTTGGGAAATTAATTTCGGGAGGGATGACAACCATTTTATTATTATTATTTTTTCACTTTTCTTATTTTTTTAAATATAAAATAAGGAAAATGGAAACGAAACTTTACACTTAACTCTCATTCTCAACAACGGCTAAAACAACATTTAATTAAAAAATGGTCACCATAAATCTAAGAAGAATTTAGTTTGCTCAACTGCATGGTCAGGTGTAATGGGACTGAGTGCCTTTGGGTAAACGACATGAATCTCGTCGGACATGGGATGTTGTGGTGTTGTTTGTCGTCCTCAAGCATCTGCTCGAAGGCTCGGAGAGAGTGGGCGACACGACTGTGAAACATACACGGTGGGGTGGGGCTGGGTGCATTTAGCGCACGATAGAGTGAGACCGAAAAACCAAACAAAATGAGTTGAAGCTGACGGTGCAGAATAAGAAAGCTGGAAGAGAAAGAAAAAGATTAAAGAAAAATATTTAGTTTGAAAACTGAAACTACTACAAATTCAATATTACTCGACATTTGTAACTTTTCAATACTTAATGTTTTTATGAAAAAATGTCAAGTAACATGTTTTTTTTTTTTTTTTAAAGAAAAATGTATTTTTAAAGGAAAAACGTCAATAAAACTTTAAAAAGCCCAGAGCTTAACGGAATTTTTCATGCCAACATAAAACTTACATTTCGAAAATATCAAGTTTATTCATAATTAAGGCCCCGTTGATAAACATTTGTTTTTTTTTTAAAAAAACGTGAAGAATACTTTTCTTTGTAATTTTGAGAGGGGCAATTATGTAATCTGGCTACTTCTTCAATTTAGGGCTGTGAATCACGACTTTTGTTTTGAACAACACACAAAGAGGGAAAAACCAAAAGAAACAAAGGAAAGAAAGAACGCAAGCATCGATCACCATTCTTCGCGTGGGTCTATGTTTAGAGGTTTCTTCACCGCTGGTATTGGTCTCGATATCACATCGGAGTGGGTCTCGGAACAGAAGGGTATCGTGGGTCTCAGTTGAGTTTTTCTTATAGTGATTGTTCTTCTAGGCTTTTGCTTTAACTTCGAATAGTTCTTGTATTAAGCGGCTTGGTTTAGCTACTGTTATCTCGATCCTCATTCGTTATGTGTATTGGGTTCTTGACGAATAATCCATTCTGAACTAGGGATTTTAACACATTTCTATGGCTTTTTAGTGAGGTCTTCATCTTCAAAACTCACTTCAAGTGTCAACTCTAATGTTTTTATATTCATGTTTATATGTTCTTTTAACCCTCTTTTTGATTGCAAACACTTACTTTTTTTTGCTGGTTTGAACACGTTTTTCGTACTTGCTTACCTGCAGTAATAGGAGCATCTTATTCCTGTGTGCCAACAACAATTTCAATTATTTTGGCGGGTCGATATTGTGACATAGCAAATCCACATGAGGTAAGTTCAGAACAACTCTCTTTGTTGCTGGCTCATTTTCAGGTAATCGTCTATCCTAATCTTGAATCCTTTGTATCAAGTGTTTTTCCCCATTCAACTGGAGTTTGTGTTTGCTGCAACTGTTAGCCATTTCTTTTTTGTTCTGTTTTAGTTCGGTTTAGCGGTTTTTTTTTGCTGGGATTTGGAAATCTTGGGTAAGAATAGAGTGGTTTTTGCTTATTTCCTGTCTTTCACAAGATTAATGGTTCTAAAGTATATTAAAAATGTTCTTGCCTTCAATTTTACCCATAATGTCTAAGCTAACACCATTGTTGTAATAAAGGTCCCTTAAAACTGTAATGCTTTTATTAAAGGGTAGCCAAATTGGAATGATTCTTCCTAATATCTGTTTTCACATTGAAAAAAGCTTGAAGCTATTGTGGGTATATGGAATTTGGTTTTGAAGCTACCGTGGGTATATAACTTGAAATAGGCGCGACAACATCAGCTTCCACCTCCTCTTTCACGTTTTCGACGAGCTGCAGAGTCGAGGGGTCGATTCTGGCGGCTTGGGTCTTTTCCAACGTGCGGGGGGTTTATTTTACGGCGATTCGAGCAATGGGTATTGGATTCTCGGTGGTTGTTAGCGATTTTAGGCTATAGGTAAGTGAGATTTAAAGCTTTTTGGTACTGATTTTAGTGGTTAACTGGTACCTATTAATGTTTGGGTCTTAATTTAAGGTACCCATAGCGTTTGGGAGGCCAAAACACAAAATTGGAGTGAAATTAGAACCTGGACAGCAAGCGTCGTGTTCGTTTGGGTGAGTTTCTACCTACCTATTAAAATCAAGTTGGTTTTTAGTGAAATTATGGAAATTGGATTCTTCATTGTTGGAACCTTGCGTGTGAAATTAGATTGACTTGTTTGTGGGGTCGTGAGCGGTGCCACATCGAGCTAATTGAATTTTCATAAATCGTATGAGTTATACCCCAATGTAAGTGACCATATATGCCAAATGTGGGGCTTGAATACTCCCAGGGAGGTGTTTGATTTAATGCCTAAGAGGGATGTTGTCTTGTGGAGCTCTTTCATCGATGGATTTTGA

mRNA sequence

ATGCTATCACTCCTTATCTGTGCCAAGAAATCACTAGAGCATGTATACGTTGCGGGGCCCTTCGTTATGGGTCTTCTATTAGAAGGTAAGCCTGAAGAAGCTGCTAAAGTCATCATAGAAATCTTGCTTCAGTTCTTGCCAGTGGTAGACGATAGTCGCTTTACGACTCTCCTCCCAGCGAGGGCTGGCCTGGAATGGCCAAATGATCTTTTGAGTCTGTTCCAAGACGACGACATGGAGTGGCCGAAGGAACTTAAGATTTTGATCCAAAGGCTCGTGCAAGAGTGGCCTGCGGAACTTATAAAACTCCAAAAAGATGCTAACAAAAAACGGAGGGAAAAACCAAAAGAAACAAAGGAAAGAAAGAACGCAAGCATCGATCACCATTCTTCGCGTGGGTCTATGTTTAGAGGTTTCTTCACCGCTGGTATTGGTCTCGATATCACATCGGAGTGGGTCTCGGAACAGAAGGTAATAGGAGCATCTTATTCCTGTGTGCCAACAACAATTTCAATTATTTTGGCGGGTCGATATTGTGACATAGCAAATCCACATGAGGCGCGACAACATCAGCTTCCACCTCCTCTTTCACGTTTTCGACGAGCTGCAGAGTCGAGGGGTCGATTCTGGCGGCTTGGGGAGGTGTTTGATTTAATGCCTAAGAGGGATGTTGTCTTGTGGAGCTCTTTCATCGATGGATTTTGA

Coding sequence (CDS)

ATGCTATCACTCCTTATCTGTGCCAAGAAATCACTAGAGCATGTATACGTTGCGGGGCCCTTCGTTATGGGTCTTCTATTAGAAGGTAAGCCTGAAGAAGCTGCTAAAGTCATCATAGAAATCTTGCTTCAGTTCTTGCCAGTGGTAGACGATAGTCGCTTTACGACTCTCCTCCCAGCGAGGGCTGGCCTGGAATGGCCAAATGATCTTTTGAGTCTGTTCCAAGACGACGACATGGAGTGGCCGAAGGAACTTAAGATTTTGATCCAAAGGCTCGTGCAAGAGTGGCCTGCGGAACTTATAAAACTCCAAAAAGATGCTAACAAAAAACGGAGGGAAAAACCAAAAGAAACAAAGGAAAGAAAGAACGCAAGCATCGATCACCATTCTTCGCGTGGGTCTATGTTTAGAGGTTTCTTCACCGCTGGTATTGGTCTCGATATCACATCGGAGTGGGTCTCGGAACAGAAGGTAATAGGAGCATCTTATTCCTGTGTGCCAACAACAATTTCAATTATTTTGGCGGGTCGATATTGTGACATAGCAAATCCACATGAGGCGCGACAACATCAGCTTCCACCTCCTCTTTCACGTTTTCGACGAGCTGCAGAGTCGAGGGGTCGATTCTGGCGGCTTGGGGAGGTGTTTGATTTAATGCCTAAGAGGGATGTTGTCTTGTGGAGCTCTTTCATCGATGGATTTTGA

Protein sequence

MLSLLICAKKSLEHVYVAGPFVMGLLLEGKPEEAAKVIIEILLQFLPVVDDSRFTTLLPARAGLEWPNDLLSLFQDDDMEWPKELKILIQRLVQEWPAELIKLQKDANKKRREKPKETKERKNASIDHHSSRGSMFRGFFTAGIGLDITSEWVSEQKVIGASYSCVPTTISIILAGRYCDIANPHEARQHQLPPPLSRFRRAAESRGRFWRLGEVFDLMPKRDVVLWSSFIDGF

Homology

[Close]

BLAST of Lcy10g011610 vs. ExPASy Swiss-Prot
Match: Q0WPE9 (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana OX=3702 GN=NAT7 PE=2 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 1.0e-03
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 0


Query: 158 VIGASYSCVPTTISIILAGRYCDIANPHE 187
           VIG SY+ VPTT+SIILAGRY DI +P E
Sbjct: 106 VIGGSYTYVPTTLSIILAGRYSDILDPQE 134

[Close]

BLAST of Lcy10g011610 vs. TAIR 10
Match: AT1G60030.1 (nucleobase-ascorbate transporter 7 )

HSP 1 Score: 45.4 bits (106), Expect = 7.1e-05
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 0


Query: 158 VIGASYSCVPTTISIILAGRYCDIANPHE 187
           VIG SY+ VPTT+SIILAGRY DI +P E
Sbjct: 106 VIGGSYTYVPTTLSIILAGRYSDILDPQE 134

[Close]

BLAST of Lcy10g011610 vs. TAIR 10
Match: AT5G62890.1 (Xanthine/uracil permease family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.7e-04
Identity = 19/27 (70.37%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 158 VIGASYSCVPTTISIILAGRYCDIANP 185
           V+GASY+ VPTTISIIL+GR+ D +NP
Sbjct: 100 VVGASYTFVPTTISIILSGRFSDTSNP 126

[Close]

BLAST of Lcy10g011610 vs. TAIR 10
Match: AT5G62890.2 (Xanthine/uracil permease family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.7e-04
Identity = 19/27 (70.37%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 158 VIGASYSCVPTTISIILAGRYCDIANP 185
           V+GASY+ VPTTISIIL+GR+ D +NP
Sbjct: 100 VVGASYTFVPTTISIILSGRFSDTSNP 126

[Close]

BLAST of Lcy10g011610 vs. TAIR 10
Match: AT5G62890.3 (Xanthine/uracil permease family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.7e-04
Identity = 19/27 (70.37%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 158 VIGASYSCVPTTISIILAGRYCDIANP 185
           V+GASY+ VPTTISIIL+GR+ D +NP
Sbjct: 100 VVGASYTFVPTTISIILSGRFSDTSNP 126

[Close]

BLAST of Lcy10g011610 vs. TAIR 10
Match: AT5G62890.4 (Xanthine/uracil permease family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.7e-04
Identity = 19/27 (70.37%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 158 VIGASYSCVPTTISIILAGRYCDIANP 185
           V+GASY+ VPTTISIIL+GR+ D +NP
Sbjct: 100 VVGASYTFVPTTISIILSGRFSDTSNP 126

The following BLAST results are available for this feature:

BLAST of Lcy10g011610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WPE9	1.0e-03	72.41	Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana OX=3702 GN=NAT7 PE=2 ...	[more]

BLAST of Lcy10g011610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lcy10g011610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lcy10g011610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60030.1	7.1e-05	72.41	nucleobase-ascorbate transporter 7	[more]
AT5G62890.1	2.7e-04	70.37	Xanthine/uracil permease family protein	[more]
AT5G62890.2	2.7e-04	70.37	Xanthine/uracil permease family protein	[more]
AT5G62890.3	2.7e-04	70.37	Xanthine/uracil permease family protein	[more]
AT5G62890.4	2.7e-04	70.37	Xanthine/uracil permease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g011610.1	Lcy10g011610.1	mRNA