Lcy10g010370 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g010370
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRING-type domain-containing protein
LocationChr10: 38162689 .. 38164572 (+)
RNA-Seq ExpressionLcy10g010370
SyntenyLcy10g010370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTTCTTCTGCCTCAGGCCAATCTCGATTCCTCCATTTTTCTGAAACTTCCTTTGAAGTTTCTCTCTCTCTCTTCATCCCAATTCTCTCTTTCTCCCTCTTCTTCAAGGTTCAGAGCCACAGCCTCCCGTCGATCGGATTCTCTCTCCGGCTCCGATTCTAGGGTTTCTGTTCCGGCGAATGCTGTTCCTCATCCTCCGATGAATCGCCCGCACAGCAACCATCTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCTCAGTCCGAGTGCTGGATTCTCCACAATGTCCGTCTCAAGGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGTTTCTGTCCCGTTTGCTTCGATGTCTACGACGATTCCACTTCGCCGCCGTCTCATCAGCGAGTCATGTGCTTCAGATGCCCCTCGATCTCTCATCTCTCTTGTATCTCCTTTCGTTATTCTTCTACCTTCCTTTGCCCTCTCTGCTCTGATCCTTGTTTTGCCTTCTTCGACGGTTTTGACTCCGGCGGCCTTTGCGAATCGGAGTCCGCCGTCGCTGTTTTGGCCGGGAGAGACGTTGATGGTAAATCGGCTAAGGCGATTGTCGCTGCGGCTCGTGTCGCCGCTCAATCCATGCGGAGAGCGGCGGCGGACGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTAGCTAAGAAGCAGGCTACTCTCTCATTGGAGCGGCTTGCGTATCTTGTGCTACAGGAGAAAGATAGAAATGGATATGCTAATAGTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTGGAAGAACCTAAGCTACAGGACAATGGTGTAGCAGCCATTCTCGAGCGTAATAGGGGGAATCAGACTCAGTAGAGGGCCAATCGATTTTGACGAAGGTAGCTGATTGAGGAAACGGACTGTAGAGAGTAATCTTTTTCGACTGTCTCATCCAATCGAGTAGCTCAAAGATTCAGTAGAATACAGAGCGCGGAGGCACTATTAAGCATCCATTGAAGATTCTAGATCAATGTAGTGATGGTTTTTCTATGCTCATAGATGCCAGGAAAGATCAGTAGGGGGAAGTGTGAATGGATTTCCATGTACATTTCAATATTGTTTGATTGCCCTTTGGGAGATTTTTCTCCATATTGAAATGCTATTCAGAATTGGGCAGCTTGTTCTGCCTCTCTATTGATTCCAATTCTTTGTTTTATCACTTCTGTTTCTTTTTTGACTCTCTCGAGATTCTCTATATATGGTTCTCAGCTTCTACTTCATTCTGCTCTCTCTTCTGGTGGCCATTTTAGTCAGAATCTCATAGATTTATGGGACGCCACTGTTGCCGCCTTTGAGCAACTAGAATCGACATTGCAGGGTGGATCCGCGGTGGGCATTTGATATTCAAAATTCAAATGCCAGAGGTGGCGGAGTGGTGGTCATATCACGACCCTGGTGGCGGTCGCGGCGGCGGAGGCGGTGGATGTTGCTGGTTTTTAACTCTTAAAATTGGCCACTTTCCCCAGTCTTCGTTGTCTCTGCCAAACTTTGATCGAAAAAAGCTGCCATTTCATTGTTCTCGAGCATTTCAACCAATGAAGTGATGAAGTCTGGTTCTCTTATGACTTTTCTGAGTTACCTCGCTTCGTTTAGTTCAGATGATACAACCGAGTCCACTCATCGACTCGCTGCCAGTTAACCGAGTTGACTCACTGAATTTCCATGTCCATTAATAATTTCTCTTAGTCCAAAAAAAGAACATTTTTTTCATTGACAGCCAAAAAAGAACGTTACTTTTGAGAATAATATATCTAATTTATTAATGGGTTTTTTTTCCTCCCTTTTATTTCC

mRNA sequence

CTTCTTCTTCTTCTGCCTCAGGCCAATCTCGATTCCTCCATTTTTCTGAAACTTCCTTTGAAGTTTCTCTCTCTCTCTTCATCCCAATTCTCTCTTTCTCCCTCTTCTTCAAGGTTCAGAGCCACAGCCTCCCGTCGATCGGATTCTCTCTCCGGCTCCGATTCTAGGGTTTCTGTTCCGGCGAATGCTGTTCCTCATCCTCCGATGAATCGCCCGCACAGCAACCATCTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCTCAGTCCGAGTGCTGGATTCTCCACAATGTCCGTCTCAAGGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGTTTCTGTCCCGTTTGCTTCGATGTCTACGACGATTCCACTTCGCCGCCGTCTCATCAGCGAGTCATGTGCTTCAGATGCCCCTCGATCTCTCATCTCTCTTGTATCTCCTTTCGTTATTCTTCTACCTTCCTTTGCCCTCTCTGCTCTGATCCTTGTTTTGCCTTCTTCGACGGTTTTGACTCCGGCGGCCTTTGCGAATCGGAGTCCGCCGTCGCTGTTTTGGCCGGGAGAGACGTTGATGGTAAATCGGCTAAGGCGATTGTCGCTGCGGCTCGTGTCGCCGCTCAATCCATGCGGAGAGCGGCGGCGGACGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTAGCTAAGAAGCAGGCTACTCTCTCATTGGAGCGGCTTGCGTATCTTGTGCTACAGGAGAAAGATAGAAATGGATATGCTAATAGTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTGGAAGAACCTAAGCTACAGGACAATGGTGTAGCAGCCATTCTCGAGCGTAATAGGGGGAATCAGACTCAGTAGAGGGCCAATCGATTTTGACGAAGGTAGCTGATTGAGGAAACGGACTGTAGAGAGTAATCTTTTTCGACTGTCTCATCCAATCGAGTAGCTCAAAGATTCAGTAGAATACAGAGCGCGGAGGCACTATTAAGCATCCATTGAAGATTCTAGATCAATGTAGTGATGGTTTTTCTATGCTCATAGATGCCAGGAAAGATCAGTAGGGGGAAGTGTGAATGGATTTCCATGTACATTTCAATATTGTTTGATTGCCCTTTGGGAGATTTTTCTCCATATTGAAATGCTATTCAGAATTGGGCAGCTTGTTCTGCCTCTCTATTGATTCCAATTCTTTGTTTTATCACTTCTGTTTCTTTTTTGACTCTCTCGAGATTCTCTATATATGGTTCTCAGCTTCTACTTCATTCTGCTCTCTCTTCTGGTGGCCATTTTAGTCAGAATCTCATAGATTTATGGGACGCCACTGTTGCCGCCTTTGAGCAACTAGAATCGACATTGCAGGGTGGATCCGCGGTGGGCATTTGATATTCAAAATTCAAATGCCAGAGGTGGCGGAGTGGTGGTCATATCACGACCCTGGTGGCGGTCGCGGCGGCGGAGGCGGTGGATGTTGCTGGTTTTTAACTCTTAAAATTGGCCACTTTCCCCAGTCTTCGTTGTCTCTGCCAAACTTTGATCGAAAAAAGCTGCCATTTCATTGTTCTCGAGCATTTCAACCAATGAAGTGATGAAGTCTGGTTCTCTTATGACTTTTCTGAGTTACCTCGCTTCGTTTAGTTCAGATGATACAACCGAGTCCACTCATCGACTCGCTGCCAGTTAACCGAGTTGACTCACTGAATTTCCATGTCCATTAATAATTTCTCTTAGTCCAAAAAAAGAACATTTTTTTCATTGACAGCCAAAAAAGAACGTTACTTTTGAGAATAATATATCTAATTTATTAATGGGTTTTTTTTCCTCCCTTTTATTTCC

Coding sequence (CDS)

CTTCTTCTTCTTCTGCCTCAGGCCAATCTCGATTCCTCCATTTTTCTGAAACTTCCTTTGAAGTTTCTCTCTCTCTCTTCATCCCAATTCTCTCTTTCTCCCTCTTCTTCAAGGTTCAGAGCCACAGCCTCCCGTCGATCGGATTCTCTCTCCGGCTCCGATTCTAGGGTTTCTGTTCCGGCGAATGCTGTTCCTCATCCTCCGATGAATCGCCCGCACAGCAACCATCTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCTCAGTCCGAGTGCTGGATTCTCCACAATGTCCGTCTCAAGGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGTTTCTGTCCCGTTTGCTTCGATGTCTACGACGATTCCACTTCGCCGCCGTCTCATCAGCGAGTCATGTGCTTCAGATGCCCCTCGATCTCTCATCTCTCTTGTATCTCCTTTCGTTATTCTTCTACCTTCCTTTGCCCTCTCTGCTCTGATCCTTGTTTTGCCTTCTTCGACGGTTTTGACTCCGGCGGCCTTTGCGAATCGGAGTCCGCCGTCGCTGTTTTGGCCGGGAGAGACGTTGATGGTAAATCGGCTAAGGCGATTGTCGCTGCGGCTCGTGTCGCCGCTCAATCCATGCGGAGAGCGGCGGCGGACGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTAGCTAAGAAGCAGGCTACTCTCTCATTGGAGCGGCTTGCGTATCTTGTGCTACAGGAGAAAGATAGAAATGGATATGCTAATAGTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTGGAAGAACCTAAGCTACAGGACAATGGTGTAGCAGCCATTCTCGAGCGTAATAGGGGGAATCAGACTCAGTAG

Protein sequence

LLLLLPQANLDSSIFLKLPLKFLSLSSSQFSLSPSSSRFRATASRRSDSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGERTVEEPKLQDNGVAAILERNRGNQTQ
Homology
BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match: A0A6J1GVZ7 (uncharacterized protein LOC111457661 OS=Cucurbita moschata OX=3662 GN=LOC111457661 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.7e-105
Identity = 207/256 (80.86%), Postives = 223/256 (87.11%), Query Frame = 0

Query: 48  DSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASF 107
           D ++GSDSRVSVPANA   PPMNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASF
Sbjct: 34  DFVAGSDSRVSVPANAAAVPPMNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASF 93

Query: 108 RRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLC 167
           RRLCTNCVLKNNLSRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLC
Sbjct: 94  RRLCTNCVLKNNLSRFCPLCFDIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLC 153

Query: 168 PLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 227
           P+CSDPCFAFFDGFDS GL +SE AVAVLAGR  DGKSAKAIVAAARVAAQSMRRAAADA
Sbjct: 154 PVCSDPCFAFFDGFDSDGLRQSEPAVAVLAGR--DGKSAKAIVAAARVAAQSMRRAAADA 213

Query: 228 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGE-RTVEEPKLQD 287
           RAVAEMKI+NA  AKKQATL+LERLA+LVLQEKDRNGYA +NG+A AG     EE +LQ 
Sbjct: 214 RAVAEMKIRNAVFAKKQATLALERLAFLVLQEKDRNGYAKTNGNAAAGAVEEEEETELQG 273

Query: 288 NGVAAILERNRGNQTQ 303
             V AILER + N TQ
Sbjct: 274 EVVTAILERMKANHTQ 287

BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match: A0A0A0L5G4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 3.7e-102
Identity = 202/249 (81.12%), Postives = 219/249 (87.95%), Query Frame = 0

Query: 49  SLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFR 108
           SLS S SRVSVPANA   PPMNR HSNHLQSNSISHCQ+CGISQS CWILHNVR KA+FR
Sbjct: 47  SLSVSHSRVSVPANATV-PPMNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFR 106

Query: 109 RLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCP 168
           RLCTNCVLK+NLSRFCP+CFDVY+DST PPSH RVMCFRCPSISHLSC+SFR+SSTFLCP
Sbjct: 107 RLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP 166

Query: 169 LCSDPCFAFFDGFDSGG-LCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 228
           LCSDP F FFDGFDSGG LC+SES VA LAG++VD KS KAIVAAARV+AQSMRRAA DA
Sbjct: 167 LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDA 226

Query: 229 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGERTVEEP--KLQ 288
           RAVAEMKIKNAA AKKQATL+LE+LAYLVLQEKD+NGY+ SNGDAV  ER VEE   KLQ
Sbjct: 227 RAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQ 286

Query: 289 DNGVAAILE 295
           +  V AI +
Sbjct: 287 EKDVTAIFD 294

BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match: A0A6J1IXP5 (uncharacterized protein LOC111479468 OS=Cucurbita maxima OX=3661 GN=LOC111479468 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 7.1e-98
Identity = 192/235 (81.70%), Postives = 205/235 (87.23%), Query Frame = 0

Query: 69  MNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCF 128
           MNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASFRRLCTNCVLKNNLSRFCP+CF
Sbjct: 1   MNRPHCNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 60

Query: 129 DVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSGGLCE 188
           D+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLCPLCSDPCFAFFDGFDSG L +
Sbjct: 61  DIYDDSTPPSSHQRVMCFRCPSISHISCTSFRFSSTFLCPLCSDPCFAFFDGFDSGSLRQ 120

Query: 189 SESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLS 248
           SE AV+VLAGR  DGKSAKAIVAAARV AQSMRRAAADARAVAEMK +NA  AKKQATL+
Sbjct: 121 SELAVSVLAGR--DGKSAKAIVAAARVVAQSMRRAAADARAVAEMKFRNAVFAKKQATLA 180

Query: 249 LERLAYLVLQEKDRNGYANSNGDAVAGE-RTVEEPKLQDNGVAAILERNRGNQTQ 303
           LERLAYLVLQEKDRNGYA +NG+A AG     EE +LQ   V AILER + NQTQ
Sbjct: 181 LERLAYLVLQEKDRNGYAKTNGNAAAGAVEEEEETELQGEVVTAILERMKANQTQ 233

BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match: A0A6J1FY52 (uncharacterized protein LOC111448356 OS=Cucurbita moschata OX=3662 GN=LOC111448356 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 9.3e-98
Identity = 191/228 (83.77%), Postives = 207/228 (90.79%), Query Frame = 0

Query: 77  LQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTS 136
           +QSNSISHCQECGI+QSECWILHNVR+KASFRRLCTNCVL+NN+SRFCPVCFDVYDDST+
Sbjct: 1   MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTA 60

Query: 137 PPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSG--GLCESESAVA 196
           PPSHQRVMCFRCPSISHLSCISFR+SSTFLCPLCSDP F FFD F SG  GLC+SE AVA
Sbjct: 61  PPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFTFFDCFGSGGLGLCQSEYAVA 120

Query: 197 VLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLERLAY 256
            LAGRD+ GKSAKA+VAAARVAAQSMRRAAADARAVAEMKIKNAA AKKQATL+LERLAY
Sbjct: 121 TLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAY 180

Query: 257 LVLQEKDRNGYANSNGDAVAGERTVEEPKLQDNGVAAILERNRGNQTQ 303
           L L+EKD N +ANSNGDAVAGE TVEE KLQD  +++ILE    NQTQ
Sbjct: 181 LELEEKDGNEHANSNGDAVAGEMTVEEQKLQD-WISSILEPKTRNQTQ 227

BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match: A0A6J1I928 (uncharacterized protein LOC111470781 OS=Cucurbita maxima OX=3661 GN=LOC111470781 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.5e-97
Identity = 189/228 (82.89%), Postives = 206/228 (90.35%), Query Frame = 0

Query: 77  LQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTS 136
           +QSNSISHCQECGI+QSECWILHNVR+KASFRRLCTNC+L+NN+SRFCPVCFDVYDDST+
Sbjct: 1   MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCILRNNISRFCPVCFDVYDDSTA 60

Query: 137 PPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSG--GLCESESAVA 196
           PPSHQRVMCFRCPSISHLSCISFR+SSTFLCPLCSDP F FFD F SG  GLC+SE AVA
Sbjct: 61  PPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFTFFDCFGSGGLGLCQSEYAVA 120

Query: 197 VLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLERLAY 256
            LAGRD+ GKSAKA+VAAARVAAQSMRRAAADARAVAEMKIKNAA AKKQATL+LERLAY
Sbjct: 121 TLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAY 180

Query: 257 LVLQEKDRNGYANSNGDAVAGERTVEEPKLQDNGVAAILERNRGNQTQ 303
           L L+EKD N Y NSNGDAVAGE TVEE KLQ+  +++ILE    NQTQ
Sbjct: 181 LELEEKDGNEYGNSNGDAVAGEMTVEEHKLQE-WISSILEPKTRNQTQ 227

BLAST of Lcy10g010370 vs. NCBI nr
Match: XP_038902666.1 (uncharacterized protein LOC120089301 [Benincasa hispida])

HSP 1 Score: 392.9 bits (1008), Expect = 2.5e-105
Identity = 201/235 (85.53%), Postives = 214/235 (91.06%), Query Frame = 0

Query: 69  MNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCF 128
           MNR H NHLQSNS+SHCQECGISQS CWILHNVRLKASFRRLCTNCVLK+NLSRFCP+CF
Sbjct: 1   MNRSHCNHLQSNSVSHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLSRFCPLCF 60

Query: 129 DVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSGGLCE 188
           DVYDDST PPSHQRVMCFRCPSISHLSC SFR+SSTFLCPLCSDPCFAFFDGFDSGGLC+
Sbjct: 61  DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSTFLCPLCSDPCFAFFDGFDSGGLCQ 120

Query: 189 SESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLS 248
           SES VA LA R+VD KSAKAIVAAARV+AQSMRRAA DARAVAEMKIKNAA AKKQATL+
Sbjct: 121 SESTVAFLARRNVDAKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLA 180

Query: 249 LERLAYLVLQEKDRNGYANSNGDAVAGERTVEE--PKLQDNGVAAILERNRGNQT 302
           LERLAYLVLQEKDRNGYA +NGDAVAGERTVEE   KLQ+  V +I  R +GN+T
Sbjct: 181 LERLAYLVLQEKDRNGYAKTNGDAVAGERTVEEEDSKLQEKEVTSIFNRMKGNRT 235

BLAST of Lcy10g010370 vs. NCBI nr
Match: XP_022955770.1 (uncharacterized protein LOC111457661 [Cucurbita moschata])

HSP 1 Score: 391.7 bits (1005), Expect = 5.6e-105
Identity = 207/256 (80.86%), Postives = 223/256 (87.11%), Query Frame = 0

Query: 48  DSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASF 107
           D ++GSDSRVSVPANA   PPMNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASF
Sbjct: 34  DFVAGSDSRVSVPANAAAVPPMNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASF 93

Query: 108 RRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLC 167
           RRLCTNCVLKNNLSRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLC
Sbjct: 94  RRLCTNCVLKNNLSRFCPLCFDIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLC 153

Query: 168 PLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 227
           P+CSDPCFAFFDGFDS GL +SE AVAVLAGR  DGKSAKAIVAAARVAAQSMRRAAADA
Sbjct: 154 PVCSDPCFAFFDGFDSDGLRQSEPAVAVLAGR--DGKSAKAIVAAARVAAQSMRRAAADA 213

Query: 228 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGE-RTVEEPKLQD 287
           RAVAEMKI+NA  AKKQATL+LERLA+LVLQEKDRNGYA +NG+A AG     EE +LQ 
Sbjct: 214 RAVAEMKIRNAVFAKKQATLALERLAFLVLQEKDRNGYAKTNGNAAAGAVEEEEETELQG 273

Query: 288 NGVAAILERNRGNQTQ 303
             V AILER + N TQ
Sbjct: 274 EVVTAILERMKANHTQ 287

BLAST of Lcy10g010370 vs. NCBI nr
Match: KAG7018542.1 (hypothetical protein SDJN02_20411, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 390.2 bits (1001), Expect = 1.6e-104
Identity = 206/255 (80.78%), Postives = 222/255 (87.06%), Query Frame = 0

Query: 48  DSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASF 107
           D ++GSDSRVSVPANA   PPMNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASF
Sbjct: 34  DFVAGSDSRVSVPANAAAVPPMNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASF 93

Query: 108 RRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLC 167
           RRLCTNCVLKNNLSRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLC
Sbjct: 94  RRLCTNCVLKNNLSRFCPLCFDIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLC 153

Query: 168 PLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 227
           P+CSDPCFAFFDGFDS GL +SE AVAVLAGR  DGKSAKAIVAAARVAAQSMRRAAADA
Sbjct: 154 PVCSDPCFAFFDGFDSDGLRQSEPAVAVLAGR--DGKSAKAIVAAARVAAQSMRRAAADA 213

Query: 228 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGE-RTVEEPKLQD 287
           RAVAEMKI+NA  AKKQATL+LERLA+LVLQEKDRNGYA +NG+A AG     EE +LQ 
Sbjct: 214 RAVAEMKIRNAVFAKKQATLALERLAFLVLQEKDRNGYAKTNGNAAAGAVEEEEETELQG 273

Query: 288 NGVAAILERNRGNQT 302
             V AILER + N T
Sbjct: 274 EVVTAILERMKANHT 286

BLAST of Lcy10g010370 vs. NCBI nr
Match: KAG6582143.1 (hypothetical protein SDJN03_22145, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.3 bits (970), Expect = 6.4e-101
Identity = 196/234 (83.76%), Postives = 210/234 (89.74%), Query Frame = 0

Query: 48  DSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASF 107
           D ++GSDSRVSVPANA   PPMNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASF
Sbjct: 34  DFVAGSDSRVSVPANAAAVPPMNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASF 93

Query: 108 RRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLC 167
           RRLCTNCVLKNNLSRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLC
Sbjct: 94  RRLCTNCVLKNNLSRFCPLCFDIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLC 153

Query: 168 PLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 227
           P+CSDPCFAFFDGFDS GL +SE AVAVLAGR  DGKSAKAIVAAARVAAQSMRRAAADA
Sbjct: 154 PVCSDPCFAFFDGFDSDGLRQSEPAVAVLAGR--DGKSAKAIVAAARVAAQSMRRAAADA 213

Query: 228 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGERTVEE 282
           RAVAEMKI+NA  AKKQATL+LERLA+LVLQEKDRNGYA +NG+A AG    EE
Sbjct: 214 RAVAEMKIRNAVFAKKQATLALERLAFLVLQEKDRNGYAKTNGNAAAGAVEEEE 265

BLAST of Lcy10g010370 vs. NCBI nr
Match: KAG7029036.1 (hypothetical protein SDJN02_10219, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373.2 bits (957), Expect = 2.1e-99
Identity = 201/254 (79.13%), Postives = 218/254 (85.83%), Query Frame = 0

Query: 51  SGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFRRL 110
           +G    VSV ANAVP  PM        QSNSISHCQECGI+QSECWILHNVR+KASFRRL
Sbjct: 19  NGGFVMVSVTANAVPPHPM--------QSNSISHCQECGITQSECWILHNVRVKASFRRL 78

Query: 111 CTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLC 170
           CTNCVL+NN+SRFCPVCFDVYDDST+PPSHQRVMCFRCPSISHLSCISFR+SSTFLCPLC
Sbjct: 79  CTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLC 138

Query: 171 SDPCFAFFDGFDSG--GLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADAR 230
           SDP F FFD F SG  GLC+SE AVA LAGRD+ GKSAKA+VAAARVAAQSMRRAAADAR
Sbjct: 139 SDPSFTFFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADAR 198

Query: 231 AVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGERTVEEPKLQDNG 290
           A+AEMKIKNAA AKKQATL+LERLAYL L+EKD N +ANSNGDAVAGE TVEE KLQD  
Sbjct: 199 AIAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVAGEMTVEEQKLQD-W 258

Query: 291 VAAILERNRGNQTQ 303
           +++ILE    NQTQ
Sbjct: 259 ISSILEPKMRNQTQ 263

BLAST of Lcy10g010370 vs. TAIR 10
Match: AT1G09520.1 (LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-25
Identity = 73/188 (38.83%), Postives = 108/188 (57.45%), Query Frame = 0

Query: 79  SNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTSPP 138
           +NS   C +CG   S+ W++H VRL+AS R  CT+C+L+N+ + FCP CF +YD  +SPP
Sbjct: 20  ANSTERCDDCG--SSDAWVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYD--SSPP 79

Query: 139 SHQRVMCF--RCPSISHLSCISFRYSSTFLCPLCSDP-CFAFFDGFDSGGLCESESAVAV 198
           S +RV C    C S++H+ C       ++LCP C DP  F+FF              V  
Sbjct: 80  SFRRVSCSIKGCHSLTHIHCAGDESHLSYLCPPCRDPNSFSFF-----------RPIVDE 139

Query: 199 LAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLERLAYL 258
              R VD   ++A + AA++AA SM +A   A+   + + K AALAKK+A  +LE++  L
Sbjct: 140 NGSRFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRAREALEQVVML 192

Query: 259 VLQEKDRN 264
             +EK R+
Sbjct: 200 DAKEKARS 192

BLAST of Lcy10g010370 vs. TAIR 10
Match: AT3G17460.1 (PHD finger family protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.8e-14
Identity = 63/194 (32.47%), Postives = 96/194 (49.48%), Query Frame = 0

Query: 86  QECGI-SQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVM 145
           +EC +  + E   +H V    +FRRLCT+C+LK     FC VCF+++D++  P +  R++
Sbjct: 8   RECIVCREKEPSFIHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA--RII 67

Query: 146 CFRCPSISHLSCISFRYS--------------STFLCPLCSDPCFAFFDGFDSGGLCESE 205
           C  CPS +HLSC +   S              S+F C  CS+P F FF         +S 
Sbjct: 68  CVNCPSSTHLSCSTQPPSSSAASSSSSAPPPASSFTCQPCSNPNFTFFP--------KSR 127

Query: 206 SAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLE 265
               V     +  KSA A+VAA  ++  +M +A A  +  A  KI  A  AK +A  +L 
Sbjct: 128 VNEDVPDETPLTPKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALT 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GVZ72.7e-10580.86uncharacterized protein LOC111457661 OS=Cucurbita moschata OX=3662 GN=LOC1114576... [more]
A0A0A0L5G43.7e-10281.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1[more]
A0A6J1IXP57.1e-9881.70uncharacterized protein LOC111479468 OS=Cucurbita maxima OX=3661 GN=LOC111479468... [more]
A0A6J1FY529.3e-9883.77uncharacterized protein LOC111448356 OS=Cucurbita moschata OX=3662 GN=LOC1114483... [more]
A0A6J1I9283.5e-9782.89uncharacterized protein LOC111470781 OS=Cucurbita maxima OX=3661 GN=LOC111470781... [more]
Match NameE-valueIdentityDescription
XP_038902666.12.5e-10585.53uncharacterized protein LOC120089301 [Benincasa hispida][more]
XP_022955770.15.6e-10580.86uncharacterized protein LOC111457661 [Cucurbita moschata][more]
KAG7018542.11.6e-10480.78hypothetical protein SDJN02_20411, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6582143.16.4e-10183.76hypothetical protein SDJN03_22145, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7029036.12.1e-9979.13hypothetical protein SDJN02_10219, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT1G09520.12.7e-2538.83LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12... [more]
AT3G17460.12.8e-1432.47PHD finger family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..58
NoneNo IPR availablePANTHERPTHR34451:SF7PHD FINGER FAMILY PROTEINcoord: 70..284
NoneNo IPR availablePANTHERPTHR34451PHD FINGER FAMILY PROTEINcoord: 70..284
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 124..171
score: 8.535474

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g010370.1Lcy10g010370.1mRNA