Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTTCTTCTGCCTCAGGCCAATCTCGATTCCTCCATTTTTCTGAAACTTCCTTTGAAGTTTCTCTCTCTCTCTTCATCCCAATTCTCTCTTTCTCCCTCTTCTTCAAGGTTCAGAGCCACAGCCTCCCGTCGATCGGATTCTCTCTCCGGCTCCGATTCTAGGGTTTCTGTTCCGGCGAATGCTGTTCCTCATCCTCCGATGAATCGCCCGCACAGCAACCATCTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCTCAGTCCGAGTGCTGGATTCTCCACAATGTCCGTCTCAAGGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGTTTCTGTCCCGTTTGCTTCGATGTCTACGACGATTCCACTTCGCCGCCGTCTCATCAGCGAGTCATGTGCTTCAGATGCCCCTCGATCTCTCATCTCTCTTGTATCTCCTTTCGTTATTCTTCTACCTTCCTTTGCCCTCTCTGCTCTGATCCTTGTTTTGCCTTCTTCGACGGTTTTGACTCCGGCGGCCTTTGCGAATCGGAGTCCGCCGTCGCTGTTTTGGCCGGGAGAGACGTTGATGGTAAATCGGCTAAGGCGATTGTCGCTGCGGCTCGTGTCGCCGCTCAATCCATGCGGAGAGCGGCGGCGGACGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTAGCTAAGAAGCAGGCTACTCTCTCATTGGAGCGGCTTGCGTATCTTGTGCTACAGGAGAAAGATAGAAATGGATATGCTAATAGTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTGGAAGAACCTAAGCTACAGGACAATGGTGTAGCAGCCATTCTCGAGCGTAATAGGGGGAATCAGACTCAGTAGAGGGCCAATCGATTTTGACGAAGGTAGCTGATTGAGGAAACGGACTGTAGAGAGTAATCTTTTTCGACTGTCTCATCCAATCGAGTAGCTCAAAGATTCAGTAGAATACAGAGCGCGGAGGCACTATTAAGCATCCATTGAAGATTCTAGATCAATGTAGTGATGGTTTTTCTATGCTCATAGATGCCAGGAAAGATCAGTAGGGGGAAGTGTGAATGGATTTCCATGTACATTTCAATATTGTTTGATTGCCCTTTGGGAGATTTTTCTCCATATTGAAATGCTATTCAGAATTGGGCAGCTTGTTCTGCCTCTCTATTGATTCCAATTCTTTGTTTTATCACTTCTGTTTCTTTTTTGACTCTCTCGAGATTCTCTATATATGGTTCTCAGCTTCTACTTCATTCTGCTCTCTCTTCTGGTGGCCATTTTAGTCAGAATCTCATAGATTTATGGGACGCCACTGTTGCCGCCTTTGAGCAACTAGAATCGACATTGCAGGGTGGATCCGCGGTGGGCATTTGATATTCAAAATTCAAATGCCAGAGGTGGCGGAGTGGTGGTCATATCACGACCCTGGTGGCGGTCGCGGCGGCGGAGGCGGTGGATGTTGCTGGTTTTTAACTCTTAAAATTGGCCACTTTCCCCAGTCTTCGTTGTCTCTGCCAAACTTTGATCGAAAAAAGCTGCCATTTCATTGTTCTCGAGCATTTCAACCAATGAAGTGATGAAGTCTGGTTCTCTTATGACTTTTCTGAGTTACCTCGCTTCGTTTAGTTCAGATGATACAACCGAGTCCACTCATCGACTCGCTGCCAGTTAACCGAGTTGACTCACTGAATTTCCATGTCCATTAATAATTTCTCTTAGTCCAAAAAAAGAACATTTTTTTCATTGACAGCCAAAAAAGAACGTTACTTTTGAGAATAATATATCTAATTTATTAATGGGTTTTTTTTCCTCCCTTTTATTTCC
mRNA sequence
CTTCTTCTTCTTCTGCCTCAGGCCAATCTCGATTCCTCCATTTTTCTGAAACTTCCTTTGAAGTTTCTCTCTCTCTCTTCATCCCAATTCTCTCTTTCTCCCTCTTCTTCAAGGTTCAGAGCCACAGCCTCCCGTCGATCGGATTCTCTCTCCGGCTCCGATTCTAGGGTTTCTGTTCCGGCGAATGCTGTTCCTCATCCTCCGATGAATCGCCCGCACAGCAACCATCTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCTCAGTCCGAGTGCTGGATTCTCCACAATGTCCGTCTCAAGGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGTTTCTGTCCCGTTTGCTTCGATGTCTACGACGATTCCACTTCGCCGCCGTCTCATCAGCGAGTCATGTGCTTCAGATGCCCCTCGATCTCTCATCTCTCTTGTATCTCCTTTCGTTATTCTTCTACCTTCCTTTGCCCTCTCTGCTCTGATCCTTGTTTTGCCTTCTTCGACGGTTTTGACTCCGGCGGCCTTTGCGAATCGGAGTCCGCCGTCGCTGTTTTGGCCGGGAGAGACGTTGATGGTAAATCGGCTAAGGCGATTGTCGCTGCGGCTCGTGTCGCCGCTCAATCCATGCGGAGAGCGGCGGCGGACGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTAGCTAAGAAGCAGGCTACTCTCTCATTGGAGCGGCTTGCGTATCTTGTGCTACAGGAGAAAGATAGAAATGGATATGCTAATAGTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTGGAAGAACCTAAGCTACAGGACAATGGTGTAGCAGCCATTCTCGAGCGTAATAGGGGGAATCAGACTCAGTAGAGGGCCAATCGATTTTGACGAAGGTAGCTGATTGAGGAAACGGACTGTAGAGAGTAATCTTTTTCGACTGTCTCATCCAATCGAGTAGCTCAAAGATTCAGTAGAATACAGAGCGCGGAGGCACTATTAAGCATCCATTGAAGATTCTAGATCAATGTAGTGATGGTTTTTCTATGCTCATAGATGCCAGGAAAGATCAGTAGGGGGAAGTGTGAATGGATTTCCATGTACATTTCAATATTGTTTGATTGCCCTTTGGGAGATTTTTCTCCATATTGAAATGCTATTCAGAATTGGGCAGCTTGTTCTGCCTCTCTATTGATTCCAATTCTTTGTTTTATCACTTCTGTTTCTTTTTTGACTCTCTCGAGATTCTCTATATATGGTTCTCAGCTTCTACTTCATTCTGCTCTCTCTTCTGGTGGCCATTTTAGTCAGAATCTCATAGATTTATGGGACGCCACTGTTGCCGCCTTTGAGCAACTAGAATCGACATTGCAGGGTGGATCCGCGGTGGGCATTTGATATTCAAAATTCAAATGCCAGAGGTGGCGGAGTGGTGGTCATATCACGACCCTGGTGGCGGTCGCGGCGGCGGAGGCGGTGGATGTTGCTGGTTTTTAACTCTTAAAATTGGCCACTTTCCCCAGTCTTCGTTGTCTCTGCCAAACTTTGATCGAAAAAAGCTGCCATTTCATTGTTCTCGAGCATTTCAACCAATGAAGTGATGAAGTCTGGTTCTCTTATGACTTTTCTGAGTTACCTCGCTTCGTTTAGTTCAGATGATACAACCGAGTCCACTCATCGACTCGCTGCCAGTTAACCGAGTTGACTCACTGAATTTCCATGTCCATTAATAATTTCTCTTAGTCCAAAAAAAGAACATTTTTTTCATTGACAGCCAAAAAAGAACGTTACTTTTGAGAATAATATATCTAATTTATTAATGGGTTTTTTTTCCTCCCTTTTATTTCC
Coding sequence (CDS)
CTTCTTCTTCTTCTGCCTCAGGCCAATCTCGATTCCTCCATTTTTCTGAAACTTCCTTTGAAGTTTCTCTCTCTCTCTTCATCCCAATTCTCTCTTTCTCCCTCTTCTTCAAGGTTCAGAGCCACAGCCTCCCGTCGATCGGATTCTCTCTCCGGCTCCGATTCTAGGGTTTCTGTTCCGGCGAATGCTGTTCCTCATCCTCCGATGAATCGCCCGCACAGCAACCATCTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCTCAGTCCGAGTGCTGGATTCTCCACAATGTCCGTCTCAAGGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGTTTCTGTCCCGTTTGCTTCGATGTCTACGACGATTCCACTTCGCCGCCGTCTCATCAGCGAGTCATGTGCTTCAGATGCCCCTCGATCTCTCATCTCTCTTGTATCTCCTTTCGTTATTCTTCTACCTTCCTTTGCCCTCTCTGCTCTGATCCTTGTTTTGCCTTCTTCGACGGTTTTGACTCCGGCGGCCTTTGCGAATCGGAGTCCGCCGTCGCTGTTTTGGCCGGGAGAGACGTTGATGGTAAATCGGCTAAGGCGATTGTCGCTGCGGCTCGTGTCGCCGCTCAATCCATGCGGAGAGCGGCGGCGGACGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTAGCTAAGAAGCAGGCTACTCTCTCATTGGAGCGGCTTGCGTATCTTGTGCTACAGGAGAAAGATAGAAATGGATATGCTAATAGTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTGGAAGAACCTAAGCTACAGGACAATGGTGTAGCAGCCATTCTCGAGCGTAATAGGGGGAATCAGACTCAGTAG
Protein sequence
LLLLLPQANLDSSIFLKLPLKFLSLSSSQFSLSPSSSRFRATASRRSDSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGERTVEEPKLQDNGVAAILERNRGNQTQ
Homology
BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match:
A0A6J1GVZ7 (uncharacterized protein LOC111457661 OS=Cucurbita moschata OX=3662 GN=LOC111457661 PE=4 SV=1)
HSP 1 Score: 391.7 bits (1005), Expect = 2.7e-105
Identity = 207/256 (80.86%), Postives = 223/256 (87.11%), Query Frame = 0
Query: 48 DSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASF 107
D ++GSDSRVSVPANA PPMNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASF
Sbjct: 34 DFVAGSDSRVSVPANAAAVPPMNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASF 93
Query: 108 RRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLC 167
RRLCTNCVLKNNLSRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLC
Sbjct: 94 RRLCTNCVLKNNLSRFCPLCFDIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLC 153
Query: 168 PLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 227
P+CSDPCFAFFDGFDS GL +SE AVAVLAGR DGKSAKAIVAAARVAAQSMRRAAADA
Sbjct: 154 PVCSDPCFAFFDGFDSDGLRQSEPAVAVLAGR--DGKSAKAIVAAARVAAQSMRRAAADA 213
Query: 228 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGE-RTVEEPKLQD 287
RAVAEMKI+NA AKKQATL+LERLA+LVLQEKDRNGYA +NG+A AG EE +LQ
Sbjct: 214 RAVAEMKIRNAVFAKKQATLALERLAFLVLQEKDRNGYAKTNGNAAAGAVEEEEETELQG 273
Query: 288 NGVAAILERNRGNQTQ 303
V AILER + N TQ
Sbjct: 274 EVVTAILERMKANHTQ 287
BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match:
A0A0A0L5G4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1)
HSP 1 Score: 381.3 bits (978), Expect = 3.7e-102
Identity = 202/249 (81.12%), Postives = 219/249 (87.95%), Query Frame = 0
Query: 49 SLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFR 108
SLS S SRVSVPANA PPMNR HSNHLQSNSISHCQ+CGISQS CWILHNVR KA+FR
Sbjct: 47 SLSVSHSRVSVPANATV-PPMNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFR 106
Query: 109 RLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCP 168
RLCTNCVLK+NLSRFCP+CFDVY+DST PPSH RVMCFRCPSISHLSC+SFR+SSTFLCP
Sbjct: 107 RLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP 166
Query: 169 LCSDPCFAFFDGFDSGG-LCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 228
LCSDP F FFDGFDSGG LC+SES VA LAG++VD KS KAIVAAARV+AQSMRRAA DA
Sbjct: 167 LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDA 226
Query: 229 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGERTVEEP--KLQ 288
RAVAEMKIKNAA AKKQATL+LE+LAYLVLQEKD+NGY+ SNGDAV ER VEE KLQ
Sbjct: 227 RAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQ 286
Query: 289 DNGVAAILE 295
+ V AI +
Sbjct: 287 EKDVTAIFD 294
BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match:
A0A6J1IXP5 (uncharacterized protein LOC111479468 OS=Cucurbita maxima OX=3661 GN=LOC111479468 PE=4 SV=1)
HSP 1 Score: 367.1 bits (941), Expect = 7.1e-98
Identity = 192/235 (81.70%), Postives = 205/235 (87.23%), Query Frame = 0
Query: 69 MNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCF 128
MNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASFRRLCTNCVLKNNLSRFCP+CF
Sbjct: 1 MNRPHCNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 60
Query: 129 DVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSGGLCE 188
D+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLCPLCSDPCFAFFDGFDSG L +
Sbjct: 61 DIYDDSTPPSSHQRVMCFRCPSISHISCTSFRFSSTFLCPLCSDPCFAFFDGFDSGSLRQ 120
Query: 189 SESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLS 248
SE AV+VLAGR DGKSAKAIVAAARV AQSMRRAAADARAVAEMK +NA AKKQATL+
Sbjct: 121 SELAVSVLAGR--DGKSAKAIVAAARVVAQSMRRAAADARAVAEMKFRNAVFAKKQATLA 180
Query: 249 LERLAYLVLQEKDRNGYANSNGDAVAGE-RTVEEPKLQDNGVAAILERNRGNQTQ 303
LERLAYLVLQEKDRNGYA +NG+A AG EE +LQ V AILER + NQTQ
Sbjct: 181 LERLAYLVLQEKDRNGYAKTNGNAAAGAVEEEEETELQGEVVTAILERMKANQTQ 233
BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match:
A0A6J1FY52 (uncharacterized protein LOC111448356 OS=Cucurbita moschata OX=3662 GN=LOC111448356 PE=4 SV=1)
HSP 1 Score: 366.7 bits (940), Expect = 9.3e-98
Identity = 191/228 (83.77%), Postives = 207/228 (90.79%), Query Frame = 0
Query: 77 LQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTS 136
+QSNSISHCQECGI+QSECWILHNVR+KASFRRLCTNCVL+NN+SRFCPVCFDVYDDST+
Sbjct: 1 MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTA 60
Query: 137 PPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSG--GLCESESAVA 196
PPSHQRVMCFRCPSISHLSCISFR+SSTFLCPLCSDP F FFD F SG GLC+SE AVA
Sbjct: 61 PPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFTFFDCFGSGGLGLCQSEYAVA 120
Query: 197 VLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLERLAY 256
LAGRD+ GKSAKA+VAAARVAAQSMRRAAADARAVAEMKIKNAA AKKQATL+LERLAY
Sbjct: 121 TLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAY 180
Query: 257 LVLQEKDRNGYANSNGDAVAGERTVEEPKLQDNGVAAILERNRGNQTQ 303
L L+EKD N +ANSNGDAVAGE TVEE KLQD +++ILE NQTQ
Sbjct: 181 LELEEKDGNEHANSNGDAVAGEMTVEEQKLQD-WISSILEPKTRNQTQ 227
BLAST of Lcy10g010370 vs. ExPASy TrEMBL
Match:
A0A6J1I928 (uncharacterized protein LOC111470781 OS=Cucurbita maxima OX=3661 GN=LOC111470781 PE=4 SV=1)
HSP 1 Score: 364.8 bits (935), Expect = 3.5e-97
Identity = 189/228 (82.89%), Postives = 206/228 (90.35%), Query Frame = 0
Query: 77 LQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTS 136
+QSNSISHCQECGI+QSECWILHNVR+KASFRRLCTNC+L+NN+SRFCPVCFDVYDDST+
Sbjct: 1 MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCILRNNISRFCPVCFDVYDDSTA 60
Query: 137 PPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSG--GLCESESAVA 196
PPSHQRVMCFRCPSISHLSCISFR+SSTFLCPLCSDP F FFD F SG GLC+SE AVA
Sbjct: 61 PPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFTFFDCFGSGGLGLCQSEYAVA 120
Query: 197 VLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLERLAY 256
LAGRD+ GKSAKA+VAAARVAAQSMRRAAADARAVAEMKIKNAA AKKQATL+LERLAY
Sbjct: 121 TLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAY 180
Query: 257 LVLQEKDRNGYANSNGDAVAGERTVEEPKLQDNGVAAILERNRGNQTQ 303
L L+EKD N Y NSNGDAVAGE TVEE KLQ+ +++ILE NQTQ
Sbjct: 181 LELEEKDGNEYGNSNGDAVAGEMTVEEHKLQE-WISSILEPKTRNQTQ 227
BLAST of Lcy10g010370 vs. NCBI nr
Match:
XP_038902666.1 (uncharacterized protein LOC120089301 [Benincasa hispida])
HSP 1 Score: 392.9 bits (1008), Expect = 2.5e-105
Identity = 201/235 (85.53%), Postives = 214/235 (91.06%), Query Frame = 0
Query: 69 MNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCF 128
MNR H NHLQSNS+SHCQECGISQS CWILHNVRLKASFRRLCTNCVLK+NLSRFCP+CF
Sbjct: 1 MNRSHCNHLQSNSVSHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLSRFCPLCF 60
Query: 129 DVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLCSDPCFAFFDGFDSGGLCE 188
DVYDDST PPSHQRVMCFRCPSISHLSC SFR+SSTFLCPLCSDPCFAFFDGFDSGGLC+
Sbjct: 61 DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSTFLCPLCSDPCFAFFDGFDSGGLCQ 120
Query: 189 SESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLS 248
SES VA LA R+VD KSAKAIVAAARV+AQSMRRAA DARAVAEMKIKNAA AKKQATL+
Sbjct: 121 SESTVAFLARRNVDAKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLA 180
Query: 249 LERLAYLVLQEKDRNGYANSNGDAVAGERTVEE--PKLQDNGVAAILERNRGNQT 302
LERLAYLVLQEKDRNGYA +NGDAVAGERTVEE KLQ+ V +I R +GN+T
Sbjct: 181 LERLAYLVLQEKDRNGYAKTNGDAVAGERTVEEEDSKLQEKEVTSIFNRMKGNRT 235
BLAST of Lcy10g010370 vs. NCBI nr
Match:
XP_022955770.1 (uncharacterized protein LOC111457661 [Cucurbita moschata])
HSP 1 Score: 391.7 bits (1005), Expect = 5.6e-105
Identity = 207/256 (80.86%), Postives = 223/256 (87.11%), Query Frame = 0
Query: 48 DSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASF 107
D ++GSDSRVSVPANA PPMNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASF
Sbjct: 34 DFVAGSDSRVSVPANAAAVPPMNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASF 93
Query: 108 RRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLC 167
RRLCTNCVLKNNLSRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLC
Sbjct: 94 RRLCTNCVLKNNLSRFCPLCFDIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLC 153
Query: 168 PLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 227
P+CSDPCFAFFDGFDS GL +SE AVAVLAGR DGKSAKAIVAAARVAAQSMRRAAADA
Sbjct: 154 PVCSDPCFAFFDGFDSDGLRQSEPAVAVLAGR--DGKSAKAIVAAARVAAQSMRRAAADA 213
Query: 228 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGE-RTVEEPKLQD 287
RAVAEMKI+NA AKKQATL+LERLA+LVLQEKDRNGYA +NG+A AG EE +LQ
Sbjct: 214 RAVAEMKIRNAVFAKKQATLALERLAFLVLQEKDRNGYAKTNGNAAAGAVEEEEETELQG 273
Query: 288 NGVAAILERNRGNQTQ 303
V AILER + N TQ
Sbjct: 274 EVVTAILERMKANHTQ 287
BLAST of Lcy10g010370 vs. NCBI nr
Match:
KAG7018542.1 (hypothetical protein SDJN02_20411, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 390.2 bits (1001), Expect = 1.6e-104
Identity = 206/255 (80.78%), Postives = 222/255 (87.06%), Query Frame = 0
Query: 48 DSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASF 107
D ++GSDSRVSVPANA PPMNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASF
Sbjct: 34 DFVAGSDSRVSVPANAAAVPPMNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASF 93
Query: 108 RRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLC 167
RRLCTNCVLKNNLSRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLC
Sbjct: 94 RRLCTNCVLKNNLSRFCPLCFDIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLC 153
Query: 168 PLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 227
P+CSDPCFAFFDGFDS GL +SE AVAVLAGR DGKSAKAIVAAARVAAQSMRRAAADA
Sbjct: 154 PVCSDPCFAFFDGFDSDGLRQSEPAVAVLAGR--DGKSAKAIVAAARVAAQSMRRAAADA 213
Query: 228 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGE-RTVEEPKLQD 287
RAVAEMKI+NA AKKQATL+LERLA+LVLQEKDRNGYA +NG+A AG EE +LQ
Sbjct: 214 RAVAEMKIRNAVFAKKQATLALERLAFLVLQEKDRNGYAKTNGNAAAGAVEEEEETELQG 273
Query: 288 NGVAAILERNRGNQT 302
V AILER + N T
Sbjct: 274 EVVTAILERMKANHT 286
BLAST of Lcy10g010370 vs. NCBI nr
Match:
KAG6582143.1 (hypothetical protein SDJN03_22145, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 378.3 bits (970), Expect = 6.4e-101
Identity = 196/234 (83.76%), Postives = 210/234 (89.74%), Query Frame = 0
Query: 48 DSLSGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASF 107
D ++GSDSRVSVPANA PPMNRPH NHLQSNSIS+C ECGISQS CWILHNVR KASF
Sbjct: 34 DFVAGSDSRVSVPANAAAVPPMNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASF 93
Query: 108 RRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLC 167
RRLCTNCVLKNNLSRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFR+SSTFLC
Sbjct: 94 RRLCTNCVLKNNLSRFCPLCFDIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLC 153
Query: 168 PLCSDPCFAFFDGFDSGGLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADA 227
P+CSDPCFAFFDGFDS GL +SE AVAVLAGR DGKSAKAIVAAARVAAQSMRRAAADA
Sbjct: 154 PVCSDPCFAFFDGFDSDGLRQSEPAVAVLAGR--DGKSAKAIVAAARVAAQSMRRAAADA 213
Query: 228 RAVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGERTVEE 282
RAVAEMKI+NA AKKQATL+LERLA+LVLQEKDRNGYA +NG+A AG EE
Sbjct: 214 RAVAEMKIRNAVFAKKQATLALERLAFLVLQEKDRNGYAKTNGNAAAGAVEEEE 265
BLAST of Lcy10g010370 vs. NCBI nr
Match:
KAG7029036.1 (hypothetical protein SDJN02_10219, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 373.2 bits (957), Expect = 2.1e-99
Identity = 201/254 (79.13%), Postives = 218/254 (85.83%), Query Frame = 0
Query: 51 SGSDSRVSVPANAVPHPPMNRPHSNHLQSNSISHCQECGISQSECWILHNVRLKASFRRL 110
+G VSV ANAVP PM QSNSISHCQECGI+QSECWILHNVR+KASFRRL
Sbjct: 19 NGGFVMVSVTANAVPPHPM--------QSNSISHCQECGITQSECWILHNVRVKASFRRL 78
Query: 111 CTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVMCFRCPSISHLSCISFRYSSTFLCPLC 170
CTNCVL+NN+SRFCPVCFDVYDDST+PPSHQRVMCFRCPSISHLSCISFR+SSTFLCPLC
Sbjct: 79 CTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLC 138
Query: 171 SDPCFAFFDGFDSG--GLCESESAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADAR 230
SDP F FFD F SG GLC+SE AVA LAGRD+ GKSAKA+VAAARVAAQSMRRAAADAR
Sbjct: 139 SDPSFTFFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADAR 198
Query: 231 AVAEMKIKNAALAKKQATLSLERLAYLVLQEKDRNGYANSNGDAVAGERTVEEPKLQDNG 290
A+AEMKIKNAA AKKQATL+LERLAYL L+EKD N +ANSNGDAVAGE TVEE KLQD
Sbjct: 199 AIAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVAGEMTVEEQKLQD-W 258
Query: 291 VAAILERNRGNQTQ 303
+++ILE NQTQ
Sbjct: 259 ISSILEPKMRNQTQ 263
BLAST of Lcy10g010370 vs. TAIR 10
Match:
AT1G09520.1 (LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )
HSP 1 Score: 113.6 bits (283), Expect = 2.7e-25
Identity = 73/188 (38.83%), Postives = 108/188 (57.45%), Query Frame = 0
Query: 79 SNSISHCQECGISQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTSPP 138
+NS C +CG S+ W++H VRL+AS R CT+C+L+N+ + FCP CF +YD +SPP
Sbjct: 20 ANSTERCDDCG--SSDAWVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYD--SSPP 79
Query: 139 SHQRVMCF--RCPSISHLSCISFRYSSTFLCPLCSDP-CFAFFDGFDSGGLCESESAVAV 198
S +RV C C S++H+ C ++LCP C DP F+FF V
Sbjct: 80 SFRRVSCSIKGCHSLTHIHCAGDESHLSYLCPPCRDPNSFSFF-----------RPIVDE 139
Query: 199 LAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLERLAYL 258
R VD ++A + AA++AA SM +A A+ + + K AALAKK+A +LE++ L
Sbjct: 140 NGSRFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRAREALEQVVML 192
Query: 259 VLQEKDRN 264
+EK R+
Sbjct: 200 DAKEKARS 192
BLAST of Lcy10g010370 vs. TAIR 10
Match:
AT3G17460.1 (PHD finger family protein )
HSP 1 Score: 77.0 bits (188), Expect = 2.8e-14
Identity = 63/194 (32.47%), Postives = 96/194 (49.48%), Query Frame = 0
Query: 86 QECGI-SQSECWILHNVRLKASFRRLCTNCVLKNNLSRFCPVCFDVYDDSTSPPSHQRVM 145
+EC + + E +H V +FRRLCT+C+LK FC VCF+++D++ P + R++
Sbjct: 8 RECIVCREKEPSFIHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA--RII 67
Query: 146 CFRCPSISHLSCISFRYS--------------STFLCPLCSDPCFAFFDGFDSGGLCESE 205
C CPS +HLSC + S S+F C CS+P F FF +S
Sbjct: 68 CVNCPSSTHLSCSTQPPSSSAASSSSSAPPPASSFTCQPCSNPNFTFFP--------KSR 127
Query: 206 SAVAVLAGRDVDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIKNAALAKKQATLSLE 265
V + KSA A+VAA ++ +M +A A + A KI A AK +A +L
Sbjct: 128 VNEDVPDETPLTPKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALT 187
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GVZ7 | 2.7e-105 | 80.86 | uncharacterized protein LOC111457661 OS=Cucurbita moschata OX=3662 GN=LOC1114576... | [more] |
A0A0A0L5G4 | 3.7e-102 | 81.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1 | [more] |
A0A6J1IXP5 | 7.1e-98 | 81.70 | uncharacterized protein LOC111479468 OS=Cucurbita maxima OX=3661 GN=LOC111479468... | [more] |
A0A6J1FY52 | 9.3e-98 | 83.77 | uncharacterized protein LOC111448356 OS=Cucurbita moschata OX=3662 GN=LOC1114483... | [more] |
A0A6J1I928 | 3.5e-97 | 82.89 | uncharacterized protein LOC111470781 OS=Cucurbita maxima OX=3661 GN=LOC111470781... | [more] |
Match Name | E-value | Identity | Description | |
XP_038902666.1 | 2.5e-105 | 85.53 | uncharacterized protein LOC120089301 [Benincasa hispida] | [more] |
XP_022955770.1 | 5.6e-105 | 80.86 | uncharacterized protein LOC111457661 [Cucurbita moschata] | [more] |
KAG7018542.1 | 1.6e-104 | 80.78 | hypothetical protein SDJN02_20411, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6582143.1 | 6.4e-101 | 83.76 | hypothetical protein SDJN03_22145, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7029036.1 | 2.1e-99 | 79.13 | hypothetical protein SDJN02_10219, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09520.1 | 2.7e-25 | 38.83 | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12... | [more] |
AT3G17460.1 | 2.8e-14 | 32.47 | PHD finger family protein | [more] |