Lcy10g009990 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g009990
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSplicing factor 3B subunit 4
LocationChr10: 37539725 .. 37544223 (+)
RNA-Seq ExpressionLcy10g009990
SyntenyLcy10g009990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATAACAAAAAGAAAACAAAACCCCATAGAAACTTCTTCTTCAACTCTCGCGAGTCTGCCAGAGGTTTTAGCTTGTAGTTTCTGGTGCACCGACTAGCCGGAGAAGATGACGACGAAGATAGCGCCGGGAGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACTGCCTATGTCGGCAATCTAGATCCCCAGGTCCTTTTTTCTCTCTCTCCTTGCTTCATCAACTAATTCATCTCCAAATCCCCTCCTCTAGGGTTTCCATGTTCTTCTAATTTCATTTTGTCATACCCCTTTTCTGGTTTTTGTGTTTCCTGCAGGTTTCTGAGGAGTTGCTTTGGGAGCTGTTCGTTCAAGCCGGTCCAGTCGGTGAGTTCTTTCATTTCTCTCGCTTAATTAACTCTTAGGTTTGAGCTGTGCTGTTTTTTTCCCTTCTTCGTTTGAGCATTTCCTTGAAAAAGTTGTACCCACTTCTTATTTTGTAGTTAATGTGTACGTTCCGAAGGATAGAGTGACCAACTTGCATCAAGGATATGGATTCATTGAGTTTCGCAGTGAGGAAGATGCAGATTATGTAAGTGGTGCTGTGGACTGTTTCACGTTTTGCCTAATTATCCCCTCCTAGTTATATGCCTTGGGATGTGATTTTGATTTTCCATTCTCGATAATTTTGCAGGCAATTAAGGTGCTAAATATGATTAAGCTCTATGGGAAACCAATTCGTGTAAACAAGGTGAGTGGGGCATTTATTCCTTTAACTATGACATGATGCGTTTTGATATACTGCACAGCAAAGGAGGATGGTATTTTTTCTTCTTACAAAAATAGATATTTAACTTTTATTATGTGTGCATTGGATATTTCCAGGCGTCTCAAGACAAGAAAAGTTTGGATGTGGGGGCAAATCTCTTCATAGGAAACCTAGACCCCGTGAGTCTATATTATTATGGTTATAATTGGAAATCTTGCAAGACTAATGATTTAAAGATTGTAACTAAACCTTGGTTTTTGTTTCAGGATGTTGATGAGAAGCTCCTCTACGATACTTTCAGTGCATTTGGGGTCATTGTGACAAATCCCAAGGTTATAACTTTTTCCATATACCCCATCACTCATTCATGTTTTGTTTATCCTAGGAATTAGGATATTAGAGATCATTTTTAAGCAAACTAGTTACTAGGAGATTAGAGTTCATTTTCAAGCGAAATAGTTAGTTAGTTACTTTCTAAGGAAGTAATCTTGTTACAATTTAATGAAGTGTAGTCCTATGGAAATACTAAGGCCCGTTTGATAACCATTTCGTTTTTGGTTTTTGGTTTTTGAAAATTAAGCCTACAAACACTACTTTTACTCTCAAATTTCTTTGTTTTGTTGTCTACATCTTTCCCTTTGTCTTCAAAAACCCAGTCAAATTTTGAAAACTTAAAAAAGTAGTTTTCAAAAACTTTTTTTTTTTTAGAATGTGTCCTTAACAAAAACCATGTAAGGAAATTGGGAAGAAACGAGCATAATTTTCAAAAACCAAAAACCAAATGGTTATCAAACGGGGCCTAAACCATCACAATTTCCTTTTAGTATATTTTACCTGTATACGATATCTTTGGTGGTTTAATTTTTCTGGAGCATGTTAACCATCATTGGTCTCCATTCTGTATTTTCTTAATGTGGCTGGTAAACTTTTAGGAAGTTTGTGGTTATTTGTGGCTTTTATTAATTGATTTCTTTGTGATTTGTTTAATGATTATGATGTGAATCATGAAAACTTCTTCCTATAAAATATTGGCTGTTTGGCCCGAAGGTTACTCTGGAGTCTGGATTATGAACTTGACCCTTGGATTTCTGATGTTCAATGAAAGGTTCAGGGAGTTAAAGATAAGATCTTAGAAATATTAAGCCGAGTAAACAATGCATTTATACATGTCTAAACGATAAGTTTCTAGGATTTATTTCATGGCTACTCCACATATGATTATGTAGTTGATTTTATGAATAATTGAATAACGGCAGCACTTGTGGTTCACCCATTATACATTTTCTTCTAAAAAGAAAAAAAAAAAGAATGACAAATTATAGTATTTGTACCCTTTCTGGCATCTTACTTGAAGGGTGTTTCAGTAGAATGTCCTTTTAGCTTTATTATTATACACGATCTCTGTAATTTACCTTTTCTTGTTCTTTTGTTTTATCCGTCTCTCTTGGGTGTGCTCTTTAGAACTTTCATTGAGAAAAAAATGAAAGAATACAAGGACATACAAAAAAGCAAGCCCACAAAAAGACCTCCCTTAAAGGAAAGGTCGCCAATCCAGAATAATAGAACCTAGCGTATAATTACAAAAGGCCTTGGACACCGAGGTCCAGAGAGAAACATAGAATCTAGTGAGGGCCCATACATTGGAAGGACCCCTCTCAAGACCACGAAAAACCCTATTATTTCTCTCACCCCAAGGACCCCATAAAACACCACACACCCGAGCTCTTTAGTTGAAGTGCATTGACATGTCTTTCCCATTTCAAGCATAATGGTGATTGGTAACATCCAGTTTCTGGTTTCTTTTGTCTTTAAACAAGTGTCTTTTTTAATGAAACATGATTTCTGAATGTTCTCTTCCATAATTATTTTCTTTTCATGTCATCCCTTAGAATTTCTTTTTACTATTAAGGATTTTTTAACTGGTTTTTCTTCCATGTGGGTTACTACACCTTCCTATCACTACCTTGCTACTACTACCATTTTATTTATGGAAATGGGACTTGTTATATGACCTGGCTTTCTATTTACTATTATTCTCTTCAAGTGTTTAGTAGTTGGTTGGCTGGATTGGAAATTTGTTTGGGCTTTAAATGGATTAATAATATCATGACCGTTGGGAAGCTTAGATTTTTTGGCTAACGAACTCTGTCTATCAATTCAGTTTCCTTCCATGCTTCAAGAGCAACAGAGAACTAAAGTTTTTTGTGGATAAGACGCCACATTGTTCACTCTACTTTTCTTTTTAACAAAAGATCACTTCTTTTTGTGTGTGCCCTATTTTTCATCTTTGGATCTTTCGTATCTGGTGTGTACTCGGCTCTTTTTGGGATGTATTAGAACTGTTTAACATAAAGTTTTTAGTCTTATACACATTTTTCCTCTGACACTTAGAATGCCTTTCCTTTTTCTTAAACAGATTATGAGGGATCCAGATACAGGAAATTCGCGTGGGTTTGGTTTTATTAGTTATGACTCTTTCGAGGCATCTGATGCAGCAATTGAGGTGCGTCATTTCTTTGCTTATTGGCAATCACTGCAATCCAGCAACATACACACCGCATTCTGTTTTGATATATTGTTTATAAAGTTCCTAATGCCAGCAAGATTTAAAATAATTTGTCCACTTTAGTAACTTGCATTATCTTATTTTATATATCCTAACTAATATTGAGACATCCCTCCTAAAGAATGAAGAAAACTAATCTTGAGAAAATCTTTTGCTACTTTCACAACAGGCGATGAATGGCCAGTATCTATGTAATCGTCAAATAACAGTTTCGTATGCCTATAAGAAAGATACCAAGGGAGAGCGGCACGGCACACCTGCAGGTAAGAATTCTTTGCTGATCTGTGAACTTTCTGGACTTGTTTTAGATTATGAACAGAATTCTAACTAGTGACTTGTGGAGGATATCGTCATCGTTACTTAATTTACCTCTGTTGTGGTTTTTTCCTATTCTGCAGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAGAGTAGGCCTCACACGTTGTTCGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAACCTAACGGTGCGATCGGAGCACCGGTGCCACCGCGCCCCTTTGCAAATGGTGCCATTGCTCCCAGCCCGATTCCTGCAATACGTCCACCACCACCGCAAGGGGTGGCTTTCCCCCCTATGCAGATGCCTGGACATCCGCCAGCGTGGCAGGGTCAGCCGCAGCAACCAGGTCAAATGATGCCGGGTTCCATGATTCCGCCACCAGTTCAGCAGTTCCGACCACCTCCCCCAAACATGCCTCCACCACCTCCTCAGGCTCCAACACATTCGATGCCTATCCCTCCACCAATGGGAATGGGAGGAGCACAACCACCTCTTTGGCGACCACCACCACCACCGATGCAGCAGCAGCCTGGGAGGCCCCCTATGCAAATGTCGTCAATGCCCCCGCCGCCACCTCCGAATCACATTCCACCTCCTCTTCCATCTTCAGGCTAAGACATTATTATGCTAAGCTAGCAATGAAAATGAGGTTTTTCTGCATGATCATCATGTTTATTTCTCGTTTGTGATGATGTTCAGTAGGTTGTCAATTGTCATACAAATTGTTTACACTTTAATCCGAGAAATTAGCAGGAGGAAATTCGGCATTTTTGCTACAAAATATAAAATGTTCTCCTCTTGATAGTATGGGATACTTGTTAAAATGTTGAAAATAATACTCGATTATGATAAAG

mRNA sequence

CAAATAACAAAAAGAAAACAAAACCCCATAGAAACTTCTTCTTCAACTCTCGCGAGTCTGCCAGAGGTTTTAGCTTGTAGTTTCTGGTGCACCGACTAGCCGGAGAAGATGACGACGAAGATAGCGCCGGGAGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACTGCCTATGTCGGCAATCTAGATCCCCAGGTTTCTGAGGAGTTGCTTTGGGAGCTGTTCGTTCAAGCCGGTCCAGTCGTTAATGTGTACGTTCCGAAGGATAGAGTGACCAACTTGCATCAAGGATATGGATTCATTGAGTTTCGCAGTGAGGAAGATGCAGATTATGCAATTAAGGTGCTAAATATGATTAAGCTCTATGGGAAACCAATTCGTGTAAACAAGGCGTCTCAAGACAAGAAAAGTTTGGATGTGGGGGCAAATCTCTTCATAGGAAACCTAGACCCCGATGTTGATGAGAAGCTCCTCTACGATACTTTCAGTGCATTTGGGGTCATTGTGACAAATCCCAAGATTATGAGGGATCCAGATACAGGAAATTCGCGTGGGTTTGGTTTTATTAGTTATGACTCTTTCGAGGCATCTGATGCAGCAATTGAGGCGATGAATGGCCAGTATCTATGTAATCGTCAAATAACAGTTTCGTATGCCTATAAGAAAGATACCAAGGGAGAGCGGCACGGCACACCTGCAGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAGAGTAGGCCTCACACGTTGTTCGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAACCTAACGGTGCGATCGGAGCACCGGTGCCACCGCGCCCCTTTGCAAATGGTGCCATTGCTCCCAGCCCGATTCCTGCAATACGTCCACCACCACCGCAAGGGGTGGCTTTCCCCCCTATGCAGATGCCTGGACATCCGCCAGCGTGGCAGGGTCAGCCGCAGCAACCAGGTCAAATGATGCCGGGTTCCATGATTCCGCCACCAGTTCAGCAGTTCCGACCACCTCCCCCAAACATGCCTCCACCACCTCCTCAGGCTCCAACACATTCGATGCCTATCCCTCCACCAATGGGAATGGGAGGAGCACAACCACCTCTTTGGCGACCACCACCACCACCGATGCAGCAGCAGCCTGGGAGGCCCCCTATGCAAATGTCGTCAATGCCCCCGCCGCCACCTCCGAATCACATTCCACCTCCTCTTCCATCTTCAGGCTAAGACATTATTATGCTAAGCTAGCAATGAAAATGAGGTTTTTCTGCATGATCATCATGTTTATTTCTCGTTTGTGATGATGTTCAGTAGGTTGTCAATTGTCATACAAATTGTTTACACTTTAATCCGAGAAATTAGCAGGAGGAAATTCGGCATTTTTGCTACAAAATATAAAATGTTCTCCTCTTGATAGTATGGGATACTTGTTAAAATGTTGAAAATAATACTCGATTATGATAAAG

Coding sequence (CDS)

ATGACGACGAAGATAGCGCCGGGAGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACTGCCTATGTCGGCAATCTAGATCCCCAGGTTTCTGAGGAGTTGCTTTGGGAGCTGTTCGTTCAAGCCGGTCCAGTCGTTAATGTGTACGTTCCGAAGGATAGAGTGACCAACTTGCATCAAGGATATGGATTCATTGAGTTTCGCAGTGAGGAAGATGCAGATTATGCAATTAAGGTGCTAAATATGATTAAGCTCTATGGGAAACCAATTCGTGTAAACAAGGCGTCTCAAGACAAGAAAAGTTTGGATGTGGGGGCAAATCTCTTCATAGGAAACCTAGACCCCGATGTTGATGAGAAGCTCCTCTACGATACTTTCAGTGCATTTGGGGTCATTGTGACAAATCCCAAGATTATGAGGGATCCAGATACAGGAAATTCGCGTGGGTTTGGTTTTATTAGTTATGACTCTTTCGAGGCATCTGATGCAGCAATTGAGGCGATGAATGGCCAGTATCTATGTAATCGTCAAATAACAGTTTCGTATGCCTATAAGAAAGATACCAAGGGAGAGCGGCACGGCACACCTGCAGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAGAGTAGGCCTCACACGTTGTTCGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAACCTAACGGTGCGATCGGAGCACCGGTGCCACCGCGCCCCTTTGCAAATGGTGCCATTGCTCCCAGCCCGATTCCTGCAATACGTCCACCACCACCGCAAGGGGTGGCTTTCCCCCCTATGCAGATGCCTGGACATCCGCCAGCGTGGCAGGGTCAGCCGCAGCAACCAGGTCAAATGATGCCGGGTTCCATGATTCCGCCACCAGTTCAGCAGTTCCGACCACCTCCCCCAAACATGCCTCCACCACCTCCTCAGGCTCCAACACATTCGATGCCTATCCCTCCACCAATGGGAATGGGAGGAGCACAACCACCTCTTTGGCGACCACCACCACCACCGATGCAGCAGCAGCCTGGGAGGCCCCCTATGCAAATGTCGTCAATGCCCCCGCCGCCACCTCCGAATCACATTCCACCTCCTCTTCCATCTTCAGGCTAA

Protein sequence

MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPPPVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Homology
[Close]
BLAST of Lcy10g009990 vs. ExPASy Swiss-Prot
Match: Q15427 (Splicing factor 3B subunit 4 OS=Homo sapiens OX=9606 GN=SF3B4 PE=1 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 7.1e-92
Identity = 227/420 (54.05%), Postives = 255/420 (60.71%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDA
Sbjct: 8   ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDA 67

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
           DYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+
Sbjct: 68  DYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVIL 127

Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
             PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERH 187

Query: 200 GTPAERVLAASNP--QKSRPHTLFASGPP---------------TLPKVAQPNGAIGAPV 259
           G+ AER+LAA NP  Q  RPH LFA  PP                 P    P G+   PV
Sbjct: 188 GSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPV 247

Query: 260 PPRPFANGAIAPSPIPAIRPPP-PQGVA------------------------FPP----- 319
           PP     GA+ P   PA+ PPP P G A                        FPP     
Sbjct: 248 PP----PGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPH 307

Query: 320 -----MQMPGHPPAWQGQPQQPGQMMPGSMIPPPVQQFRPPPPNMP---PPPPQAPTHSM 379
                MQ+  H P   G P       PGS   PP +    PPP MP   PPP   P    
Sbjct: 308 PGMSQMQLAHHGPHGLGHPHAG---PPGSGGQPPPR----PPPGMPHPGPPPMGMPPRGP 367

[Close]
BLAST of Lcy10g009990 vs. ExPASy Swiss-Prot
Match: Q8QZY9 (Splicing factor 3B subunit 4 OS=Mus musculus OX=10090 GN=Sf3b4 PE=1 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.5e-91
Identity = 223/412 (54.13%), Postives = 250/412 (60.68%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDA
Sbjct: 8   ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDA 67

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
           DYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+
Sbjct: 68  DYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVIL 127

Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
             PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERH 187

Query: 200 GTPAERVLAASNP--QKSRPHTLFASG--PPTLPKVAQPNGAIGAPVPPRPFANGAIAPS 259
           G+ AER+LAA NP  Q  RPH LFA    PP+ P     +   G P P  P       P 
Sbjct: 188 GSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPV 247

Query: 260 PIPAIRPP--PPQGVAFPPMQMP----GHPPAWQGQP---------QQPGQMMPGSMIPP 319
           P P   PP  PP   A PP  MP    GH P   G P           P    PG M  P
Sbjct: 248 PPPGALPPGIPP---AMPPPPMPPGAGGHGPPAAGTPGAGHPGHGHSHPHPFPPGGMPHP 307

Query: 320 PVQQFR-------------------------PPPPNMP---PPPPQAPTHSMPIPPPMGM 379
            + Q +                          PPP MP   PPP   P    P   PMG 
Sbjct: 308 GMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGH 367

[Close]
BLAST of Lcy10g009990 vs. ExPASy Swiss-Prot
Match: Q6AYL5 (Splicing factor 3B subunit 4 OS=Rattus norvegicus OX=10116 GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.5e-91
Identity = 223/412 (54.13%), Postives = 250/412 (60.68%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDA
Sbjct: 8   ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDA 67

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
           DYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+
Sbjct: 68  DYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVIL 127

Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
             PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERH 187

Query: 200 GTPAERVLAASNP--QKSRPHTLFASG--PPTLPKVAQPNGAIGAPVPPRPFANGAIAPS 259
           G+ AER+LAA NP  Q  RPH LFA    PP+ P     +   G P P  P       P 
Sbjct: 188 GSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPV 247

Query: 260 PIPAIRPP--PPQGVAFPPMQMP----GHPPAWQGQP---------QQPGQMMPGSMIPP 319
           P P   PP  PP   A PP  MP    GH P   G P           P    PG M  P
Sbjct: 248 PPPGALPPGIPP---AMPPPPMPPGAGGHGPPAAGTPGAGHPGHGHSHPHPFPPGGMPHP 307

Query: 320 PVQQFR-------------------------PPPPNMP---PPPPQAPTHSMPIPPPMGM 379
            + Q +                          PPP MP   PPP   P    P   PMG 
Sbjct: 308 GMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGH 367

[Close]
BLAST of Lcy10g009990 vs. ExPASy Swiss-Prot
Match: Q09442 (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans OX=6239 GN=sap-49 PE=1 SV=2)

HSP 1 Score: 323.6 bits (828), Expect = 3.1e-87
Identity = 217/389 (55.78%), Postives = 250/389 (64.27%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           ERNQDAT YVG LD +VSE +LWEL VQAGPVV+V +PKDRVT  HQG+GF+EF  EEDA
Sbjct: 8   ERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDA 67

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
           DYAIK+LNMIKLYGKPI+VNKAS  +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 68  DYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127

Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
             PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERH
Sbjct: 128 QVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERH 187

Query: 200 GTPAERVLAASNP--QKSRPHTLFAS---GPPTLPKVAQP--NGAIGAPVPPRPFANGAI 259
           GT AER+LAA NP   K RPH +F+    G P    +A P  + AI A    RP      
Sbjct: 188 GTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAAHATGRP----GY 247

Query: 260 APSPI------------PAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQ-MMPGSMIP 319
            P P+            P + PPPP     PP  MP  P      P  P   M P    P
Sbjct: 248 QPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPP-PMPPTPGMTPRPPPPPSSGMWPPPPPP 307

Query: 320 PPVQQFRPP-PPNMPPPPPQA-----PTHSMPIPPPMGM---GGAQPPLWRPPPPPMQQQ 378
           PP +   PP  P MPPPPP +         MP PPP GM   GG  PP   PPP      
Sbjct: 308 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP---PPPRYPSAG 367

[Close]
BLAST of Lcy10g009990 vs. ExPASy Swiss-Prot
Match: O14102 (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sap49 PE=3 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 2.6e-62
Identity = 153/318 (48.11%), Postives = 202/318 (63.52%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           +RNQDAT Y+GNLD +V++ +L+EL +QAGPVVN+++P+DRV N H G+GF EF  E+D 
Sbjct: 6   DRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDV 65

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 139
           +YA ++LN +KL+GKPIRVN+ASQD+  +  +GANLF+GNLDP VDE++LYDTFSA G +
Sbjct: 66  EYACQILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQL 125

Query: 140 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 199
           V  P++ RD + G S+G+GF+SYDSFE +DAAIEAMN Q+L N+ ITVSYA+K++ KGER
Sbjct: 126 VKAPQVARD-ENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGER 185

Query: 200 HGTPAERVLAASNPQKSRPHTLFASGPPTL-PKVAQPNGAIGAPVPPRPFANGAIAPSPI 259
           HG  AER LAA+  +     T  ++ PP   P    P  A   P          IA + I
Sbjct: 186 HGDIAERKLAAAAKKNKVAVTPQSTLPPGFSPATPAPTSAANTP--------ATIAATSI 245

Query: 260 PAIRPPPPQG--VAFPPMQMPGHPP--AWQGQPQQPGQ-MMPGSMIPPPVQQFRPPPPNM 319
           P +   P  G   A PP+ +P   P  A Q  P  P   MM   M P       PPPP M
Sbjct: 246 PPVPNVPLVGATTAVPPLSIPNVLPFTAAQHFPGMPAMPMMNVPMGPGGAPLVPPPPPGM 305

Query: 320 PPPPPQAPTHSMPIPPPM 331
               P     ++P  P M
Sbjct: 306 VMASPSPAAATIPGAPVM 314

[Close]
BLAST of Lcy10g009990 vs. ExPASy TrEMBL
Match: A0A5D3DJ06 (Splicing factor 3B subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00160 PE=3 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 1.3e-202
Identity = 369/379 (97.36%), Postives = 370/379 (97.63%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPGQMMPGSMIPP
Sbjct: 241 PVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMS 360
           PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQPPLWRPPPPPM QQQPGRPPMQMS
Sbjct: 301 PVQQFRPPPPNMPMPPPQAQAHSMPIPPPMGMGGAQPPLWRPPPPPMQQQQPGRPPMQMS 360

Query: 361 SMPPPPPPNHIPPPLPSSG 379
           SMPPPPPPNHIPPPLPSSG
Sbjct: 361 SMPPPPPPNHIPPPLPSSG 379

[Close]
BLAST of Lcy10g009990 vs. ExPASy TrEMBL
Match: A0A0A0LAZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G172960 PE=3 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.5e-201
Identity = 368/379 (97.10%), Postives = 369/379 (97.36%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPGQMMPGSMIPP
Sbjct: 241 PVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMS 360
           PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQP LWRPPPPPM QQQPGRPPMQMS
Sbjct: 301 PVQQFRPPPPNMPLPPPQAQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMS 360

Query: 361 SMPPPPPPNHIPPPLPSSG 379
           SMPPPPPPNHIPPPLPSSG
Sbjct: 361 SMPPPPPPNHIPPPLPSSG 379

[Close]
BLAST of Lcy10g009990 vs. ExPASy TrEMBL
Match: A0A6J1C8Z7 (splicing factor 3B subunit 4 OS=Momordica charantia OX=3673 GN=LOC111009481 PE=3 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 2.5e-201
Identity = 370/380 (97.37%), Postives = 370/380 (97.37%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG IGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGVIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANG IAPSPIPAIRPPPPQGVAFPPMQMPG  PAWQGQPQQPGQMMPGSMIPP
Sbjct: 241 PVPPRPFANGTIAPSPIPAIRPPPPQGVAFPPMQMPGQ-PAWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPP--MQQQPGRPPMQM 360
           PVQQFRPPPPNMPPPPPQAP HSM IPPPMGMGGAQPPLWRPPPPP  MQQQPGRPPMQM
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPAHSMQIPPPMGMGGAQPPLWRPPPPPMQMQQQPGRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPLPSSG 379
           SSM PPPPPNHIPPPL SSG
Sbjct: 361 SSM-PPPPPNHIPPPLQSSG 378

[Close]
BLAST of Lcy10g009990 vs. ExPASy TrEMBL
Match: A0A1S3AYG3 (splicing factor 3B subunit 4 OS=Cucumis melo OX=3656 GN=LOC103483958 PE=3 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 4.3e-201
Identity = 367/379 (96.83%), Postives = 368/379 (97.10%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPG MMPGSMIPP
Sbjct: 241 PVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGHMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMS 360
           PVQQFRPPPPNMP PPPQA  HSM IPPPMGMGGAQPPLWRPPPPPM QQQPGRPPMQMS
Sbjct: 301 PVQQFRPPPPNMPMPPPQAQAHSMSIPPPMGMGGAQPPLWRPPPPPMQQQQPGRPPMQMS 360

Query: 361 SMPPPPPPNHIPPPLPSSG 379
           SMPPPPPPNHIPPPLPSSG
Sbjct: 361 SMPPPPPPNHIPPPLPSSG 379

[Close]
BLAST of Lcy10g009990 vs. ExPASy TrEMBL
Match: A0A6J1G8U2 (splicing factor 3B subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451774 PE=3 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 3.6e-200
Identity = 364/380 (95.79%), Postives = 368/380 (96.84%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG +G 
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
            +PPRPFANG IAPSPIPAIRPPPPQGVAFPPMQMPG PPAWQGQPQQ GQ+MPGSM+ P
Sbjct: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM--QQQPGRPPMQM 360
           PVQQFRPPPPNMPPPPPQAP HSMPIPPPMGMGG QPPLWRPPPPPM  QQQPGRPPMQM
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPPPMQQQQQPGRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPLPSSG 379
           SSMPPPPPPNHIPPP PSSG
Sbjct: 361 SSMPPPPPPNHIPPPHPSSG 380

[Close]
BLAST of Lcy10g009990 vs. NCBI nr
Match: XP_038878136.1 (splicing factor 3B subunit 4 [Benincasa hispida])

HSP 1 Score: 722.2 bits (1863), Expect = 2.3e-204
Identity = 370/378 (97.88%), Postives = 371/378 (98.15%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANGAI PSPIPAIRPPPPQGVAFPPM M G PPAWQGQPQQPGQMMPGS+IPP
Sbjct: 241 PVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQPGRPPMQMSS 360
           PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQPPLWRPPPPPMQQQPGRPPMQMSS
Sbjct: 301 PVQQFRPPPPNMPLPPPQAQAHSMPIPPPMGMGGAQPPLWRPPPPPMQQQPGRPPMQMSS 360

Query: 361 MPPPPPPNHIPPPLPSSG 379
           MPPPPPPNHIPPPLPSSG
Sbjct: 361 MPPPPPPNHIPPPLPSSG 378

[Close]
BLAST of Lcy10g009990 vs. NCBI nr
Match: TYK23651.1 (splicing factor 3B subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 715.3 bits (1845), Expect = 2.8e-202
Identity = 369/379 (97.36%), Postives = 370/379 (97.63%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPGQMMPGSMIPP
Sbjct: 241 PVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMS 360
           PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQPPLWRPPPPPM QQQPGRPPMQMS
Sbjct: 301 PVQQFRPPPPNMPMPPPQAQAHSMPIPPPMGMGGAQPPLWRPPPPPMQQQQPGRPPMQMS 360

Query: 361 SMPPPPPPNHIPPPLPSSG 379
           SMPPPPPPNHIPPPLPSSG
Sbjct: 361 SMPPPPPPNHIPPPLPSSG 379

[Close]
BLAST of Lcy10g009990 vs. NCBI nr
Match: XP_004147654.1 (splicing factor 3B subunit 4 [Cucumis sativus] >KGN57241.1 hypothetical protein Csa_009897 [Cucumis sativus])

HSP 1 Score: 711.8 bits (1836), Expect = 3.1e-201
Identity = 368/379 (97.10%), Postives = 369/379 (97.36%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPGQMMPGSMIPP
Sbjct: 241 PVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMS 360
           PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQP LWRPPPPPM QQQPGRPPMQMS
Sbjct: 301 PVQQFRPPPPNMPLPPPQAQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMS 360

Query: 361 SMPPPPPPNHIPPPLPSSG 379
           SMPPPPPPNHIPPPLPSSG
Sbjct: 361 SMPPPPPPNHIPPPLPSSG 379

[Close]
BLAST of Lcy10g009990 vs. NCBI nr
Match: XP_022138265.1 (splicing factor 3B subunit 4 [Momordica charantia])

HSP 1 Score: 711.1 bits (1834), Expect = 5.2e-201
Identity = 370/380 (97.37%), Postives = 370/380 (97.37%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG IGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGVIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANG IAPSPIPAIRPPPPQGVAFPPMQMPG  PAWQGQPQQPGQMMPGSMIPP
Sbjct: 241 PVPPRPFANGTIAPSPIPAIRPPPPQGVAFPPMQMPGQ-PAWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPP--MQQQPGRPPMQM 360
           PVQQFRPPPPNMPPPPPQAP HSM IPPPMGMGGAQPPLWRPPPPP  MQQQPGRPPMQM
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPAHSMQIPPPMGMGGAQPPLWRPPPPPMQMQQQPGRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPLPSSG 379
           SSM PPPPPNHIPPPL SSG
Sbjct: 361 SSM-PPPPPNHIPPPLQSSG 378

[Close]
BLAST of Lcy10g009990 vs. NCBI nr
Match: XP_008439058.1 (PREDICTED: splicing factor 3B subunit 4 [Cucumis melo])

HSP 1 Score: 710.3 bits (1832), Expect = 8.9e-201
Identity = 367/379 (96.83%), Postives = 368/379 (97.10%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 PVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP 300
           PVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPG MMPGSMIPP
Sbjct: 241 PVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGHMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMS 360
           PVQQFRPPPPNMP PPPQA  HSM IPPPMGMGGAQPPLWRPPPPPM QQQPGRPPMQMS
Sbjct: 301 PVQQFRPPPPNMPMPPPQAQAHSMSIPPPMGMGGAQPPLWRPPPPPMQQQQPGRPPMQMS 360

Query: 361 SMPPPPPPNHIPPPLPSSG 379
           SMPPPPPPNHIPPPLPSSG
Sbjct: 361 SMPPPPPPNHIPPPLPSSG 379

[Close]
BLAST of Lcy10g009990 vs. TAIR 10
Match: AT2G18510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-133
Identity = 277/382 (72.51%), Postives = 293/382 (76.70%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTT+IAPGVGANLLGQH+ ERNQDAT YVG LD Q+SEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQ YGFIE+RSEEDADYAIKVLNMIKL+GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVI +NPKIMRDPDTGNSRGFGFISYDSFEASDAAIE+M GQYL 
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAI 240
           NRQITVSYAYKKDTKGERHGTPAER+LAA+NP  QKSRPHTLFA GPP+     Q NG  
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS--SAPQVNGL- 240

Query: 241 GAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMI 300
                PRPFANG++ P PIPA R PPP     PP      PP+W  QPQQ       SM+
Sbjct: 241 -----PRPFANGSMQPVPIPAPRQPPPP----PPQVYQTQPPSWPSQPQQ------HSMV 300

Query: 301 PPPVQQFRPPPPNMPPPPPQAPTHSM------PIPPPMGMGGAQPPLWRPPPPPMQQQPG 360
           PPP+ QFRPP    PPPPPQ   H        P PPP  MG  Q   W  PP  MQQQ G
Sbjct: 301 PPPM-QFRPPQGMPPPPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGW--PPQHMQQQGG 360

Query: 361 -----RPPMQMSSMPPPPPPNH 370
                +PP Q   M  PPPP H
Sbjct: 361 PPQQQQPPYQHHHMSMPPPPPH 361

[Close]
BLAST of Lcy10g009990 vs. TAIR 10
Match: AT4G34110.1 (poly(A) binding protein 2 )

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-30
Identity = 73/164 (44.51%), Postives = 105/164 (64.02%), Query Frame = 0 

Query: 24  DATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAI 83
           + + YVG+LD  V++  L++ F Q G VV V V +D VT    GYG++ F + +DA  AI
Sbjct: 35  NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 94

Query: 84  KVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 143
           + LN I LYGKPIRV  + +D      GA N+FI NLD  +D K L+DTFS+FG IV + 
Sbjct: 95  QELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIV-SC 154

Query: 144 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 187
           K+  D  +G S+G+GF+ Y + E++  AIE +NG  L ++Q+ V
Sbjct: 155 KVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 196

[Close]
BLAST of Lcy10g009990 vs. TAIR 10
Match: AT1G49760.1 (poly(A) binding protein 8 )

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-30
Identity = 71/175 (40.57%), Postives = 109/175 (62.29%), Query Frame = 0 

Query: 28  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLN 87
           YVG+LD  V++  L+E F QAG VV+V V +D  T    GYG++ + + +DA  A+  LN
Sbjct: 48  YVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELN 107

Query: 88  MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 147
            + L G+ IRV  + +D      G  N+FI NLD  +D K L++TFSAFG I+ + K+  
Sbjct: 108 FMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPIL-SCKVAV 167

Query: 148 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER 199
           DP +G S+G+GF+ YD+ EA+  AI+ +NG  L ++Q+ V    +  ++D  GE+
Sbjct: 168 DP-SGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEK 220

[Close]
BLAST of Lcy10g009990 vs. TAIR 10
Match: AT1G49760.2 (poly(A) binding protein 8 )

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-30
Identity = 71/175 (40.57%), Postives = 109/175 (62.29%), Query Frame = 0 

Query: 28  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLN 87
           YVG+LD  V++  L+E F QAG VV+V V +D  T    GYG++ + + +DA  A+  LN
Sbjct: 48  YVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELN 107

Query: 88  MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 147
            + L G+ IRV  + +D      G  N+FI NLD  +D K L++TFSAFG I+ + K+  
Sbjct: 108 FMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPIL-SCKVAV 167

Query: 148 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER 199
           DP +G S+G+GF+ YD+ EA+  AI+ +NG  L ++Q+ V    +  ++D  GE+
Sbjct: 168 DP-SGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEK 220

[Close]
BLAST of Lcy10g009990 vs. TAIR 10
Match: AT1G22760.1 (poly(A) binding protein 3 )

HSP 1 Score: 123.6 bits (309), Expect = 3.3e-28
Identity = 65/189 (34.39%), Postives = 114/189 (60.32%), Query Frame = 0 

Query: 18  APERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEE 77
           A + + +++ Y G+LDP+V+E  L++LF     VV+V V +D+      GY +I F +  
Sbjct: 42  ADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPN 101

Query: 78  DADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYDTFSAFG 137
           DA  A++ LN   L+ +PIR+  +++D  + L    N+FI NLD  +D K L++TFS+FG
Sbjct: 102 DAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFG 161

Query: 138 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 197
            I+ + K+  D  TG S+G+GF+ ++  E++ AAI+ +NG  + ++Q+ V +  ++  + 
Sbjct: 162 TIL-SCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERA 221

Query: 198 ERHGTPAER 206
               TP  R
Sbjct: 222 RDENTPTPR 227

The following BLAST results are available for this feature:
BLAST of Lcy10g009990 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q154277.1e-9254.05Splicing factor 3B subunit 4 OS=Homo sapiens OX=9606 GN=SF3B4 PE=1 SV=1[more]
Q8QZY93.5e-9154.13Splicing factor 3B subunit 4 OS=Mus musculus OX=10090 GN=Sf3b4 PE=1 SV=1[more]
Q6AYL53.5e-9154.13Splicing factor 3B subunit 4 OS=Rattus norvegicus OX=10116 GN=Sf3b4 PE=2 SV=1[more]
Q094423.1e-8755.78Splicing factor 3B subunit 4 OS=Caenorhabditis elegans OX=6239 GN=sap-49 PE=1 SV... [more]
O141022.6e-6248.11Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
BLAST of Lcy10g009990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DJ061.3e-20297.36Splicing factor 3B subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A0A0LAZ01.5e-20197.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G172960 PE=3 SV=1[more]
A0A6J1C8Z72.5e-20197.37splicing factor 3B subunit 4 OS=Momordica charantia OX=3673 GN=LOC111009481 PE=3... [more]
A0A1S3AYG34.3e-20196.83splicing factor 3B subunit 4 OS=Cucumis melo OX=3656 GN=LOC103483958 PE=3 SV=1[more]
A0A6J1G8U23.6e-20095.79splicing factor 3B subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451774 ... [more]
BLAST of Lcy10g009990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038878136.12.3e-20497.88splicing factor 3B subunit 4 [Benincasa hispida][more]
TYK23651.12.8e-20297.36splicing factor 3B subunit 4 [Cucumis melo var. makuwa][more]
XP_004147654.13.1e-20197.10splicing factor 3B subunit 4 [Cucumis sativus] >KGN57241.1 hypothetical protein ... [more]
XP_022138265.15.2e-20197.37splicing factor 3B subunit 4 [Momordica charantia][more]
XP_008439058.18.9e-20196.83PREDICTED: splicing factor 3B subunit 4 [Cucumis melo][more]
BLAST of Lcy10g009990 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G18510.11.3e-13372.51RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G34110.11.2e-3044.51poly(A) binding protein 2 [more]
AT1G49760.11.6e-3040.57poly(A) binding protein 8 [more]
AT1G49760.21.6e-3040.57poly(A) binding protein 8 [more]
AT1G22760.13.3e-2834.39poly(A) binding protein 3 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 26..99
e-value: 2.2E-25
score: 100.3
coord: 113..187
e-value: 1.4E-24
score: 97.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 28..97
e-value: 2.0E-19
score: 69.2
coord: 114..184
e-value: 4.9E-20
score: 71.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 25..103
score: 18.563835
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 112..191
score: 17.267626
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 17..106
e-value: 2.2E-26
score: 94.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 107..204
e-value: 3.9E-26
score: 93.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..378
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 1..356
NoneNo IPR availablePANTHERPTHR15241:SF330SPLICING FACTOR 3B SUBUNIT 4coord: 1..356
IPR034159SF3B4, RNA recognition motif 2CDDcd12335RRM2_SF3B4coord: 111..193
e-value: 1.62031E-63
score: 195.591
IPR034158SF3B4, RNA recognition motif 1CDDcd12334RRM1_SF3B4coord: 28..100
e-value: 4.85314E-55
score: 173.549
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 25..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g009990.1Lcy10g009990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0048026 positive regulation of mRNA splicing, via spliceosome
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0005689 U12-type spliceosomal complex
molecular_function GO:0003729 mRNA binding
molecular_function GO:0070063 RNA polymerase binding
molecular_function GO:0003676 nucleic acid binding